Public recordModerate
Software health reportschema 0.27.0 · metrics 1.13.0 · 2026-07-26 09:17 UTC
agporto / biocpd
Incorporating statistical shape models into the Coherent Point Drift algorithm
agporto/biocpd holds a health index of 54 out of 100, placing it in the Moderate band. It scores highest on Vitality (76/100) and lowest on Community & Adoption (24/100). It was last updated 3 days ago. A single contributor accounts for most of its recent work.
54
overall / 100Software health index
Metrics are grouped into weighted categories on one standardized 1–100 scale. Overall starts as their weighted mean; when public evidence triggers the High-Risk Jurisdiction Policy, the rating is adjusted and receives an At risk ceiling of 49. AI Readiness sits outside the overall score.
54
Excellent85-100Exemplary; meets essentially all checked criteria
Good70-84Healthy; minor gaps
Moderate50-69Acceptable with notable gaps; review recommended
At risk30-49Significant weaknesses; adoption warrants caution
Critical1-29Severe problems (abandoned, single-maintainer, no hygiene)
Score profile
Each axis is a category. The shape matters more than the average — a healthy subject fills the whole shape, while a spike-and-crater profile means strength in one dimension is masking risk in another.
Ownership
Arthur PortoPersonal account
42 followers118 public repossince Aug 2016
This repository is owned by a personal account. A single-owner project carries more continuity risk than an organization-backed one.
Package ecosystems
| Registry | Package | Version | Downloads / mo | Versions | Last publish | Tags |
|---|---|---|---|---|---|---|
| PyPI | biocpd | 1.3.0 | - | 5 | 7 days ago | point-cloudregistrationcpdshape-modelmedical-imaging |
Metrics by category
Vitality
Is the project alive — is code being written and are releases shipping?
76
Development activity
70Good
How it's scored
| 36/36 | Push recency — last push 3 days ago |
| 9.7/36 | Commit cadence — 14/52 weeks with commits |
| 14.2/18 | Commit volume — 37 commits in the last year |
| 10/10 | OpenSSF Scorecard: Maintained — 18 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10 |
Inputs used
| commits_last_year | 37 |
| human_commit_share | 1 |
| days_since_last_push | 3 |
| active_weeks_last_year | 14 |
Release discipline
84Good
How it's scored
| 27/27 | Ships releases — 1 releases published |
| 36/36 | Release recency — latest release 7 days ago |
| 12.6/27 | Release cadence — cadence unknown (single release) |
| 0/10 | OpenSSF Scorecard: Signed-Releases — no data |
Inputs used
| releases_count | 1 |
| latest_release_tag | v1.3.0 |
| releases_from_tags | no |
| days_since_latest_release | 7 |
| mean_days_between_releases | — |
Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Signed-Releases. Remaining weights renormalized.
Community & Adoption
Does the project have users, downloads, attention, and a welcoming setup for contributors?
24
Popularity & adoption
1Critical
How it's scored
| 0/60 | Stars — 2 stars |
| 0/25 | Forks — 1 forks |
| 0/15 | Watchers — 0 watchers |
Inputs used
| forks | 1 |
| stars | 2 |
| watchers | 0 |
| growth_state | unverified |
| growth_factor_pct | 100 |
| growth_unverified_reason | no_history |
Community health
50Moderate
How it's scored
| 22.5/22.5 | README |
| 22.5/22.5 | License — recognized license (GPL-3.0) |
| 0/18 | CONTRIBUTING guide |
| 0/13.5 | Code of conduct |
| 0/7.2 | Issue template |
| 0/6.3 | PR template |
Inputs used
| has_readme | yes |
| has_license | yes |
| has_contributing | no |
| has_issue_template | no |
| has_code_of_conduct | no |
| has_pull_request_template | no |
Sustainability & Governance
Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?
49
Maintainer resilience (bus factor)
10Critical
How it's scored
| 9/54 | Bus factor — 1 contributor(s) cover half of all commits |
| 0/22.5 | Commit distribution — top contributor authored 100% of commits |
| 1.4/13.5 | Contributor breadth — 1 contributors |
| 0/10 | OpenSSF Scorecard: Contributors — project has 0 contributing companies or organizations -- score normalized to 0 |
Inputs used
| bus_factor | 1 |
| contributors_sampled | 1 |
| top_contributor_share | 1 |
Issue & PR responsiveness
45At risk
How it's scored
| 0/46.8 | Issue resolution — no issues or no data |
| 23.9/38.3 | PR acceptance — 5/8 decided PRs merged |
| 0/15 | OpenSSF Scorecard: Code-Review — Found 0/12 approved changesets -- score normalized to 0 |
Inputs used
| merged_prs | 5 |
| open_issues | 0 |
| closed_issues | 0 |
| issue_closed_ratio | — |
| closed_unmerged_prs | 3 |
Excluded from scoring (no data or not applicable): Issue resolution. Remaining weights renormalized.
Ownership & stewardship
58Moderate
How it's scored
| 10/30 | Ownership backing — personal (user) account |
| 0/20 | Verified domain — not applicable to user accounts |
| 11.7/25 | Owner reach — 42 followers of agporto |
| 25/25 | Track record — 118 public repos, account ~9 yr old |
Inputs used
| followers | 42 |
| owner_type | User |
| is_verified | — |
| owner_login | agporto |
| public_repos | 118 |
| account_age_days | 3,639 |
Excluded from scoring (no data or not applicable): Verified domain. Remaining weights renormalized.
Package maintenance
100Excellent
How it's scored
| 25/25 | Published & resolvable — 1 package(s) on pypi |
| 35/35 | Publish recency — latest publish 7 days ago |
| 20/20 | Version history — 5 published versions |
| 20/20 | Not deprecated — active, not deprecated or yanked |
Inputs used
| packages | biocpd |
| ecosystems | pypi |
| any_deprecated | no |
| min_days_since_publish | 7 |
Engineering Quality
Are baseline engineering and documentation practices in place?
65
Engineering practices
68Moderate
How it's scored
| 24/24 | CI workflows — 2 workflow(s) |
| 24/24 | Tests present |
| 0/16 | Linter config |
| 0/9.6 | Pre-commit hooks |
| 0/6.4 | .editorconfig |
| 20/20 | OpenSSF Scorecard: CI-Tests — 4 out of 4 merged PRs checked by a CI test -- score normalized to 10 |
Inputs used
| has_ci | yes |
| has_tests | yes |
| has_editorconfig | no |
| has_linter_config | no |
| has_precommit_config | no |
Documentation
60Moderate
How it's scored
| 30/30 | README |
| 0/25 | Documentation directory |
| 0/15 | Documentation / homepage site |
| 10/10 | Repository description |
| 10/10 | Topics — 6 topics |
| 10/10 | Wiki |
Inputs used
| topics | biological-modeling, expectation-maximization, point-cloud, python, registration, statistical-shape-model |
| has_wiki | yes |
| homepage | — |
| has_readme | yes |
| has_docs_dir | no |
| has_description | yes |
Security
Are visible security and supply-chain practices strong, without unresolved high-risk jurisdiction exposure?
52
Security posture
40At risk
How it's scored
| 7.5/7.5 | Binary-Artifacts — no binaries found in the repo |
| 2.2/7.5 | Branch-Protection — branch protection is not maximal on development and all release branches |
| 2.5/2.5 | CI-Tests — 4 out of 4 merged PRs checked by a CI test -- score normalized to 10 |
| 0/2.5 | CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected |
| 0/7.5 | Code-Review — Found 0/12 approved changesets -- score normalized to 0 |
| 0/2.5 | Contributors — project has 0 contributing companies or organizations -- score normalized to 0 |
| 10/10 | Dangerous-Workflow — no dangerous workflow patterns detected |
| 0/7.5 | Dependency-Update-Tool — no update tool detected |
| 0/5 | Fuzzing — project is not fuzzed |
| 2.5/2.5 | License — license file detected |
| 7.5/7.5 | Maintained — 18 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10 |
| 0/5 | Packaging — no data |
| 0/5 | Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
| 0/5 | SAST — SAST tool is not run on all commits -- score normalized to 0 |
| 0/5 | Security-Policy — security policy file not detected |
| 0/7.5 | Signed-Releases — no data |
| 0/7.5 | Token-Permissions — detected GitHub workflow tokens with excessive permissions |
| 5.2/7.5 | Vulnerabilities — 3 existing vulnerabilities detected |
Inputs used
| source | openssf_scorecard |
| checks_evaluated | 16 |
| scorecard_version | v5.5.0 |
| checks_inconclusive | 2 |
| scorecard_aggregate | 4.1 |
Excluded from scoring (no data or not applicable): packaging, signed_releases. Remaining weights renormalized.
Dependency advisories
100Excellent
How it's scored
| 35/35 | Direct dependencies free of known advisories — no direct dependency carries a known advisory |
| 25/25 | Indirect dependencies free of known advisories — no indirect dependency carries a known advisory |
| 0/40 | No advisories left outstanding — no advisory carries a publication date |
Inputs used
| source | osv |
| advisories | 0 |
| affected_packages | 0 |
| assessed_packages | 16 |
| unassessed_packages | 0 |
| affected_by_severity | none |
| direct_affected_packages | 0 |
Excluded from scoring (no data or not applicable): No advisories left outstanding. Remaining weights renormalized. Matched the pypi:biocpd@1.3.0 runtime dependency closure — what installing the published package pulls in — 16 packages. Reachability is not analyzed.
AI Readiness
How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score.
30
Agent context & guidance
14Critical
How it's scored
| 0/45 | Agent instructions — no CLAUDE.md / AGENTS.md / editor rules |
| 0/15 | Machine-readable docs (llms.txt) |
| 14.4/40 | Legible commit history — 10 of 37 human commits state their intent (structured subject or explanatory body) |
Inputs used
| has_llms_txt | no |
| legible_history_share | 0.27 |
| agent_instruction_files | — |
| agent_instruction_max_bytes | — |
How it's scored
| 0/18 | One-command bootstrap |
| 22/22 | Automated tests |
| 0/11 | Lint / format config |
| 0/11 | Static type checking |
| 0/10 | Reproducible environment |
| 10/10 | Demonstrated agent practice — 3 of the last 37 commits agent-authored or agent-credited |
| 0/8 | Automated maintenance — no automated dependency updates observed |
| 0/10 | OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
Inputs used
| has_nix | no |
| has_tests | yes |
| lockfiles | — |
| has_dockerfile | no |
| typed_language | no |
| bootstrap_files | — |
| has_devcontainer | no |
| has_linter_config | no |
| typecheck_configs | — |
| agent_commit_share | 0.081 |
| toolchain_manifests | — |
| dependency_bot_commit_share | 0 |
Code legibility for models
55Moderate
How it's scored
| 0/45 | Type-checkable code — Python without a type-check config |
| 55/55 | Manageable file sizes — 0/21 source files over 60KB |
Inputs used
| primary_language | Python |
| largest_source_bytes | 32,880 |
| source_files_sampled | 21 |
| oversized_source_files | 0 |
Key facts
2GitHub stars
1contributors
37commits, last 12 months
3days since last push
1releases
1bus factor
0open issues
PyPIpackage ecosystems
Data collection warnings
- Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token
- GitHub dependency-graph SBOM unavailable (404); the dependency graph may be disabled for this repository
More detail
OpenSSF Scorecard 4.1 / 10
4.1aggregate
Independent, tool-agnostic security assessment from the open-source OpenSSF Scorecard. Each check rewards a security practice, not a specific vendor's tool. Checks Scorecard could not determine are marked n/a and excluded from the security score (never counted as zero).
| 10 | Binary-Artifacts | no binaries found in the repo |
| 3 | Branch-Protection | branch protection is not maximal on development and all release branches |
| 10 | CI-Tests | 4 out of 4 merged PRs checked by a CI test -- score normalized to 10 |
| 0 | CII-Best-Practices | no effort to earn an OpenSSF best practices badge detected |
| 0 | Code-Review | Found 0/12 approved changesets -- score normalized to 0 |
| 0 | Contributors | project has 0 contributing companies or organizations -- score normalized to 0 |
| 10 | Dangerous-Workflow | no dangerous workflow patterns detected |
| 0 | Dependency-Update-Tool | no update tool detected |
| 0 | Fuzzing | project is not fuzzed |
| 10 | License | license file detected |
| 10 | Maintained | 18 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10 |
| n/a | Packaging | packaging workflow not detected |
| 0 | Pinned-Dependencies | dependency not pinned by hash detected -- score normalized to 0 |
| 0 | SAST | SAST tool is not run on all commits -- score normalized to 0 |
| 0 | Security-Policy | security policy file not detected |
| n/a | Signed-Releases | no releases found |
| 0 | Token-Permissions | detected GitHub workflow tokens with excessive permissions |
| 7 | Vulnerabilities | 3 existing vulnerabilities detected |
Direct dependencies 4
| Registry | Package | Version constraint | Manifest |
|---|---|---|---|
| PyPI | numpy | — | pyproject.toml |
| PyPI | scipy | — | pyproject.toml |
| PyPI | scikit-learn | — | pyproject.toml |
| PyPI | matplotlib | — | pyproject.toml |
All dependencies not collected
The resolved dependency set could not be collected for this report: GitHub dependency-graph SBOM unavailable (404); the dependency graph may be disabled for this repository
Dependency advisories 0
Installing pypi:biocpd@1.3.0 pulls in 16 packages, direct and transitive: 0 carry known advisories, of which 0 are direct dependencies.
No known advisories affect the assessed dependencies.
An advisory means the version recorded in the dependency graph falls inside an advisory’s affected range. Reachability is not analysed, and the graph includes development and test pins — a finding may concern tooling rather than shipped software.
Raw JSON report machine-readable
{
"data": {
"repo": {
"topics": [
"biological-modeling",
"expectation-maximization",
"point-cloud",
"python",
"registration",
"statistical-shape-model"
],
"is_fork": false,
"size_kb": 105,
"has_wiki": true,
"homepage": null,
"languages": {
"Python": 208775
},
"pushed_at": "2026-07-22T21:41:57Z",
"created_at": "2025-08-22T05:23:54Z",
"owner_type": "User",
"updated_at": "2026-07-19T18:06:44Z",
"description": "Incorporating statistical shape models into the Coherent Point Drift algorithm",
"is_archived": false,
"is_disabled": false,
"license_spdx": "GPL-3.0",
"default_branch": "main",
"license_spdx_raw": "GPL-3.0",
"primary_language": "Python",
"significant_languages": [
"Python"
]
},
"owner": {
"blog": null,
"name": "Arthur Porto",
"type": "User",
"login": "agporto",
"company": null,
"location": "Gainesville, FL",
"followers": 42,
"avatar_url": "https://avatars.githubusercontent.com/u/20894263?v=4",
"created_at": "2016-08-07T23:44:22Z",
"is_verified": null,
"public_repos": 118,
"account_age_days": 3639
},
"license": {
"state": "standard",
"spdx_id": "GPL-3.0",
"raw_spdx": "GPL-3.0",
"file_present": true,
"scorecard_found": true,
"profile_has_license": true
},
"activity": {
"releases": [
{
"tag": "v1.3.0",
"kind": "minor",
"published_at": "2026-07-19T06:41:07Z"
}
],
"recent_commits": [
{
"oid": "98a0186fc4ba0816912cb1284c3c14b04b2a6f58",
"body": null,
"is_bot": false,
"headline": "remove ATLAS_REGISTRATION_REVIEW.md",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-07-19T18:06:37Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a9eda91099d6b56866d5b56b7ad846639e30d1a6",
"body": "Enhance pose initialization and registration performance",
"is_bot": false,
"headline": "Merge pull request #8 from agporto/codex/real-data-registration",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-07-19T06:40:01Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "b9e747363eaee23c35c8889aa65328a9ef9453c5",
"body": null,
"is_bot": false,
"headline": "Make terminal variance convergence test platform robust",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-07-18T07:53:16Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "745bb66f180f98b171428a549571f98d3a79c6c1",
"body": null,
"is_bot": false,
"headline": "Align pose defaults with real-data validation",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-07-18T04:57:59Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "e96cc0fa7f70e76b868343531972678e547a2981",
"body": null,
"is_bot": false,
"headline": "Improve registration speed and pose robustness",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-07-18T02:29:20Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "b01b53b4a18f65bd461e68731baec405012f7952",
"body": null,
"is_bot": false,
"headline": "Accelerate atlas posterior and coefficient solves",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-07-18T00:07:54Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a0ed3716659055602a5ec38019540c586068db95",
"body": "Make the real-data pose configuration the default while retaining explicit staged-search controls. Add the opt-in pivoted-Cholesky low-rank deformable implementation, diagnostics, benchmarks, and regression coverage.",
"is_bot": false,
"headline": "Use exhaustive pose defaults and accelerate deformable registration",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-07-17T23:04:38Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "efeeb37db3b120aad704e2111e8451abe5710714",
"body": null,
"is_bot": false,
"headline": "Accelerate pose hypothesis search",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-07-17T21:41:57Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "23c3d0fccef82b362fef3c7a7d91e8ed5f4befda",
"body": null,
"is_bot": false,
"headline": "Preserve best pose when refining one hypothesis",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-07-17T19:02:06Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "c3a1eb01085cf702d4c8986c5f13368c4b346a1b",
"body": null,
"is_bot": false,
"headline": "Add convergence regression coverage",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-07-17T18:51:49Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "e0bf731c47e8e6fb77ca5ea214b75986d093404f",
"body": null,
"is_bot": false,
"headline": "Isolate pose initialization from EM convergence state",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-07-17T18:26:39Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "f06bfdff8c8a3677975d7ee0f7609c3e9f84ae0e",
"body": "Preserve the legacy AtlasRegistration path while providing deterministic recovery and reusable configuration for severely misaligned inputs.\n\nCo-authored-by: Cursor <cursoragent@cursor.com>",
"is_bot": false,
"headline": "Add opt-in pose-marginalized atlas initialization",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-07-11T18:39:41Z",
"body_truncated": false,
"is_coding_agent": true
},
{
"oid": "51f8f1fe376e854da3f8c38a99212ae2099a2b03",
"body": null,
"is_bot": false,
"headline": "Update AtlasRegistration call to use None for mean_shape",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-06-23T01:57:46Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "ebfdd57f8028d82d4cd98aa415f681debefead0a",
"body": null,
"is_bot": false,
"headline": "Add LICENSE file",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-06-23T01:56:22Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "1736199dfa7d67b6a39a9690c42d2fbb159befcd",
"body": "Refactor gaussian_kernel to compute pairwise squared distances more efficiently using einsum and avoid large temporary arrays.",
"is_bot": false,
"headline": "Optimize gaussian_kernel function for distance computation",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-06-09T22:21:34Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "d2b6c56c5b83c00b4dda77595375c0e719d1360a",
"body": "Correct the computation of tr(B YPY B) to use B.T for accurate results. Update the convergence test to be scale-invariant by normalizing the absolute delta of q.",
"is_bot": false,
"headline": "Fix trace computation and improve convergence test",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-06-09T22:15:33Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "ad2a33bccab934534ce1390e58c329229a1abf5f",
"body": "Co-authored-by: Cursor <cursoragent@cursor.com>",
"is_bot": false,
"headline": "Release v1.2.0",
"author_name": "agporto",
"author_login": "agporto",
"committed_at": "2026-05-27T07:45:34Z",
"body_truncated": false,
"is_coding_agent": true
},
{
"oid": "61e5ec9b0d93697195bedf9275c233964e081a8f",
"body": null,
"is_bot": false,
"headline": "fixing similarity",
"author_name": "agporto",
"author_login": "agporto",
"committed_at": "2026-05-18T18:42:20Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "04e8f2d18ba0bf13f820141c4af8ae05c1e96ae2",
"body": "…or-correctness\n\nAdd regression test to guard Atlas sparse-path accuracy\nPrevent float silent upcasting",
"is_bot": false,
"headline": "Merge pull request #5 from agporto//analyze-atlasregistration-class-f…",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-04-23T20:37:02Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "ae17b9be728bf9f123e153150527a1a25ca06b95",
"body": null,
"is_bot": false,
"headline": "Add atlas dense-vs-sparse pipeline accuracy regression test",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-04-23T20:33:12Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "47bf9bdce31a2bbf2a223407993293bf418e0556",
"body": "speed up improvements and new tests",
"is_bot": false,
"headline": "Merge pull request #4 from agporto/codex/understand-codebase-structure",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-03-12T16:15:06Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "c35d59363840e6464f1916fc80cb29ca31b28ead",
"body": null,
"is_bot": false,
"headline": "updating tests to deal with float32",
"author_name": "agporto",
"author_login": "agporto",
"committed_at": "2026-03-12T16:10:47Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "4d36afab7a3cc290b15682dedc9fead36104ad0f",
"body": "Feature/atlas speedup exact defaults",
"is_bot": false,
"headline": "Merge pull request #2 from agporto/feature/atlas-speedup-exact-defaults",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-03-12T16:02:12Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "10af496f3ca5aa2fe8f382c3546e85c9ca734418",
"body": null,
"is_bot": false,
"headline": "adding changelog and updating version",
"author_name": "agporto",
"author_login": "agporto",
"committed_at": "2026-03-12T15:56:50Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "3381c4b3679d7156dde965361f2c5fc2c21077d4",
"body": null,
"is_bot": false,
"headline": "float32 speed boost deformable",
"author_name": "agporto",
"author_login": "agporto",
"committed_at": "2026-03-12T15:50:18Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "f4f56eaef74b1c9675d1cff8ce29126449311d95",
"body": null,
"is_bot": false,
"headline": "no changes",
"author_name": "agporto",
"author_login": "agporto",
"committed_at": "2026-03-12T15:15:04Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "f2bfd188b30fccf1ef39ea48d23be1b21556a7e3",
"body": null,
"is_bot": false,
"headline": "Add dtype-controlled AtlasRegistration pipeline and benchmark",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-03-11T21:24:13Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "9b64b03532b96fee9c16ff150ecced5e82e36186",
"body": "Tune the exact dense atlas path for 5k-point workloads by default, remove the experimental hybrid sparse backend, and keep regression and benchmark coverage aligned with the supported atlas code paths.\n\nMade-with: Cursor",
"is_bot": false,
"headline": "Refine atlas speedup defaults.",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-03-07T03:51:56Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a6c8a52507884db61766357c3a54a22ae40d6845",
"body": "Harden sparse E-step and input validation paths, add regression tests/CI execution, modernize package metadata, and speed up dense AtlasRegistration expectation with mathematically equivalent norm-expansion distance computation.\n\nCo-authored-by: Cursor <cursoragent@cursor.com>",
"is_bot": false,
"headline": "Improve registration robustness and atlas performance.",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2026-02-11T04:47:13Z",
"body_truncated": false,
"is_coding_agent": true
},
{
"oid": "462637781fdf86653ca2f16061f1568510b4c39c",
"body": null,
"is_bot": false,
"headline": "minor README correction",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2025-11-01T02:59:33Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "41de14410061c55d9a6d2ee1e66dad50626c1f8b",
"body": null,
"is_bot": false,
"headline": "Add MIT License to the project",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2025-10-08T16:39:06Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "f0fba0a6b7aeac942f950fffba7bb0bb169a5fcd",
"body": null,
"is_bot": false,
"headline": "Release 0.1.1",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2025-08-23T03:42:49Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "072b9edf27a9ecad48986dd7bd283fa46dddfee1",
"body": null,
"is_bot": false,
"headline": "Release 0.1.1",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2025-08-23T03:39:07Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "f6a199e09eaa1633b7fec0830e5720f2fbd3f06b",
"body": null,
"is_bot": false,
"headline": "adding ci and pypi",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2025-08-23T03:32:21Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "b40a8c57a837dcc62ce3abe7ce2881fe4563804e",
"body": null,
"is_bot": false,
"headline": "adding repo link",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2025-08-23T03:24:55Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "2cb5f29d168baacc9e34de0476458f27cec8e047",
"body": null,
"is_bot": false,
"headline": "minor cleanup",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2025-08-22T05:44:59Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "58ec42104d0bf41b50ff825eb66bcda03045c80a",
"body": null,
"is_bot": false,
"headline": "initial commit",
"author_name": "Arthur Porto",
"author_login": "agporto",
"committed_at": "2025-08-22T05:23:43Z",
"body_truncated": false,
"is_coding_agent": false
}
],
"releases_count": 1,
"commits_last_year": 37,
"latest_release_at": "2026-07-19T06:41:07Z",
"latest_release_tag": "v1.3.0",
"releases_from_tags": false,
"days_since_last_push": 3,
"active_weeks_last_year": 14,
"days_since_latest_release": 7,
"mean_days_between_releases": null
},
"community": {
"has_readme": true,
"has_license": true,
"has_description": true,
"has_contributing": false,
"health_percentage": 42,
"has_issue_template": false,
"has_code_of_conduct": false,
"has_pull_request_template": false
},
"ecosystem": {
"packages": [
{
"name": "biocpd",
"exists": true,
"license": "MIT",
"keywords": [
"point-cloud",
"registration",
"cpd",
"shape-model",
"medical-imaging",
"Development Status :: 3 - Alpha",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12",
"Programming Language :: Python :: 3.9",
"Topic :: Scientific/Engineering"
],
"ecosystem": "pypi",
"matches_repo": true,
"registry_url": "https://pypi.org/project/biocpd/",
"is_deprecated": false,
"latest_version": "1.3.0",
"repository_url": "https://github.com/agporto/biocpd",
"versions_count": 5,
"total_downloads": null,
"dependents_count": null,
"deprecation_note": null,
"maintainers_count": null,
"monthly_downloads": null,
"first_published_at": "2025-08-23T03:21:04.368516Z",
"latest_published_at": "2026-07-19T06:41:30.833010Z",
"latest_version_yanked": null,
"days_since_latest_publish": 7
}
]
},
"popularity": {
"forks": 1,
"stars": 2,
"watchers": 0,
"fork_history": {
"days": [
{
"date": "2026-06-18",
"count": 1
}
],
"complete": true,
"collected": 1,
"total_forks": 1
},
"star_history": null,
"open_issues_and_prs": 0
},
"ai_readiness": {
"has_nix": false,
"example_dirs": [],
"has_llms_txt": false,
"has_dockerfile": false,
"has_mcp_signal": false,
"bootstrap_files": [],
"api_schema_files": [],
"has_devcontainer": false,
"typecheck_configs": [],
"toolchain_manifests": [],
"largest_source_bytes": 32880,
"source_files_sampled": 21,
"oversized_source_files": 0,
"agent_instruction_files": [],
"agent_instruction_max_bytes": null
},
"dependencies": {
"manifests": [
"pyproject.toml",
"requirements.txt",
"setup.py"
],
"advisories": {
"error": null,
"scope": "published_package",
"source": "osv",
"findings": [],
"collected": true,
"malicious": [],
"truncated": false,
"by_severity": {},
"advisory_count": 0,
"affected_count": 0,
"assessed_count": 16,
"malicious_count": 0,
"assessed_package": "pypi:biocpd@1.3.0",
"unassessed_count": 0,
"direct_affected_count": 0
},
"ecosystems": [
"pypi"
],
"dependencies": [
{
"name": "numpy",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": null
},
{
"name": "scipy",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": null
},
{
"name": "scikit-learn",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": null
},
{
"name": "matplotlib",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": null
}
],
"all_dependencies": {
"error": "GitHub dependency-graph SBOM unavailable (404); the dependency graph may be disabled for this repository",
"source": null,
"packages": [],
"collected": false,
"truncated": false,
"total_count": null,
"direct_count": null,
"indirect_count": null
}
},
"maintainership": {
"issues": {
"open_prs": 0,
"merged_prs": 5,
"open_issues": 0,
"closed_ratio": null,
"closed_issues": 0,
"closed_unmerged_prs": 3
},
"bus_factor": 1,
"bot_contributors": 0,
"top_contributors": [
{
"type": "User",
"login": "agporto",
"commits": 37,
"avatar_url": "https://avatars.githubusercontent.com/u/20894263?v=4"
}
],
"contributors_sampled": 1,
"top_contributor_share": 1
},
"quality_signals": {
"has_ci": true,
"has_tests": true,
"ci_workflows": [
"ci.yml",
"publish.yml"
],
"has_docs_dir": false,
"linter_configs": [],
"has_editorconfig": false,
"has_linter_config": false,
"has_precommit_config": false
},
"security_signals": {
"lockfiles": [],
"scorecard": {
"checks": [
{
"name": "Binary-Artifacts",
"score": 10,
"reason": "no binaries found in the repo",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#binary-artifacts"
},
{
"name": "Branch-Protection",
"score": 3,
"reason": "branch protection is not maximal on development and all release branches",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#branch-protection"
},
{
"name": "CI-Tests",
"score": 10,
"reason": "4 out of 4 merged PRs checked by a CI test -- score normalized to 10",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#ci-tests"
},
{
"name": "CII-Best-Practices",
"score": 0,
"reason": "no effort to earn an OpenSSF best practices badge detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#cii-best-practices"
},
{
"name": "Code-Review",
"score": 0,
"reason": "Found 0/12 approved changesets -- score normalized to 0",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#code-review"
},
{
"name": "Contributors",
"score": 0,
"reason": "project has 0 contributing companies or organizations -- score normalized to 0",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#contributors"
},
{
"name": "Dangerous-Workflow",
"score": 10,
"reason": "no dangerous workflow patterns detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dangerous-workflow"
},
{
"name": "Dependency-Update-Tool",
"score": 0,
"reason": "no update tool detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dependency-update-tool"
},
{
"name": "Fuzzing",
"score": 0,
"reason": "project is not fuzzed",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#fuzzing"
},
{
"name": "License",
"score": 10,
"reason": "license file detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#license"
},
{
"name": "Maintained",
"score": 10,
"reason": "18 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#maintained"
},
{
"name": "Packaging",
"score": null,
"reason": "packaging workflow not detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#packaging"
},
{
"name": "Pinned-Dependencies",
"score": 0,
"reason": "dependency not pinned by hash detected -- score normalized to 0",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#pinned-dependencies"
},
{
"name": "SAST",
"score": 0,
"reason": "SAST tool is not run on all commits -- score normalized to 0",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#sast"
},
{
"name": "Security-Policy",
"score": 0,
"reason": "security policy file not detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#security-policy"
},
{
"name": "Signed-Releases",
"score": null,
"reason": "no releases found",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#signed-releases"
},
{
"name": "Token-Permissions",
"score": 0,
"reason": "detected GitHub workflow tokens with excessive permissions",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#token-permissions"
},
{
"name": "Vulnerabilities",
"score": 7,
"reason": "3 existing vulnerabilities detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#vulnerabilities"
}
],
"commit": "98a0186fc4ba0816912cb1284c3c14b04b2a6f58",
"ran_at": "2026-07-26T09:17:27Z",
"aggregate_score": 4.1,
"scorecard_version": "v5.5.0"
},
"has_codeql_workflow": false,
"has_security_policy": false,
"has_dependabot_config": false
},
"contribution_flow": {
"collected": true,
"ci_last_run_at": "2026-07-22T21:12:21Z",
"oldest_open_prs": [],
"last_merged_pr_at": "2026-07-19T06:40:02Z",
"ci_last_conclusion": "SUCCESS",
"oldest_open_issues": []
}
},
"config": {
"disabled_metrics": [],
"disabled_categories": [],
"disabled_components": {}
},
"source": {
"url": "https://github.com/agporto/biocpd",
"host": "github.com",
"name": "biocpd",
"owner": "agporto"
},
"metrics": {
"overall": {
"key": "overall",
"band": "moderate",
"name": "Overall health",
"note": null,
"notes": [],
"value": 54,
"inputs": {
"security": 52,
"vitality": 76,
"community": 24,
"governance": 49,
"engineering": 65
},
"components": []
},
"categories": [
{
"key": "vitality",
"band": "good",
"name": "Vitality",
"value": 76,
"weight": 0.22,
"metrics": [
{
"key": "development_activity",
"band": "good",
"name": "Development activity",
"note": null,
"notes": [],
"value": 70,
"inputs": {
"commits_last_year": 37,
"human_commit_share": 1,
"days_since_last_push": 3,
"active_weeks_last_year": 14
},
"components": [
{
"key": "push_recency",
"name": "Push recency",
"detail": "last push 3 days ago",
"points": 36,
"status": "met",
"details": [
{
"code": "push_recency",
"params": {
"days": 3
}
}
],
"max_points": 36
},
{
"key": "commit_cadence",
"name": "Commit cadence",
"detail": "14/52 weeks with commits",
"points": 9.7,
"status": "partial",
"details": [
{
"code": "commit_cadence_weeks",
"params": {
"weeks": 14
}
}
],
"max_points": 36
},
{
"key": "commit_volume",
"name": "Commit volume",
"detail": "37 commits in the last year",
"points": 14.2,
"status": "partial",
"details": [
{
"code": "commits_last_year",
"params": {
"count": 37
}
}
],
"max_points": 18
},
{
"key": "openssf_scorecard_maintained",
"name": "OpenSSF Scorecard: Maintained",
"detail": "18 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10",
"points": 10,
"status": "met",
"details": [],
"max_points": 10
}
]
},
{
"key": "release_discipline",
"band": "good",
"name": "Release discipline",
"note": "Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Signed-Releases. Remaining weights renormalized.",
"notes": [
{
"code": "excluded_no_data",
"params": {
"components": [
"openssf_scorecard_signed_releases"
]
}
},
{
"code": "weights_renormalized",
"params": {}
}
],
"value": 84,
"inputs": {
"releases_count": 1,
"latest_release_tag": "v1.3.0",
"releases_from_tags": false,
"days_since_latest_release": 7,
"mean_days_between_releases": null
},
"components": [
{
"key": "ships_releases",
"name": "Ships releases",
"detail": "1 releases published",
"points": 27,
"status": "met",
"details": [
{
"code": "releases_published",
"params": {
"count": 1
}
}
],
"max_points": 27
},
{
"key": "release_recency",
"name": "Release recency",
"detail": "latest release 7 days ago",
"points": 36,
"status": "met",
"details": [
{
"code": "release_recency",
"params": {
"days": 7
}
}
],
"max_points": 36
},
{
"key": "release_cadence",
"name": "Release cadence",
"detail": "cadence unknown (single release)",
"points": 12.6,
"status": "partial",
"details": [
{
"code": "release_cadence_unknown",
"params": {}
}
],
"max_points": 27
},
{
"key": "openssf_scorecard_signed_releases",
"name": "OpenSSF Scorecard: Signed-Releases",
"detail": "no releases found",
"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
"params": {}
}
],
"max_points": 10
}
]
},
{
"key": "abandonment",
"band": "excellent",
"name": "Abandonment",
"note": null,
"notes": [],
"value": 100,
"inputs": {
"cap": null,
"state": "maintained",
"guards": [],
"signals": [],
"red_flag": false,
"multiplier_pct": 100,
"declared_reason": null,
"unverified_reason": null,
"unanswered_open_prs": null,
"unanswered_open_issues": null,
"days_since_last_merged_pr": null,
"days_since_last_human_commit": 6,
"days_since_last_human_commit_is_floor": false
},
"components": [
{
"key": "project_is_still_maintained",
"name": "Project is still maintained",
"detail": "last human commit 6 days ago",
"points": 100,
"status": "met",
"details": [
{
"code": "abandonment_maintained",
"params": {
"days": 6
}
}
],
"max_points": 100
}
]
}
],
"description": "Is the project alive — is code being written and are releases shipping?"
},
{
"key": "community",
"band": "critical",
"name": "Community & Adoption",
"value": 24,
"weight": 0.18,
"metrics": [
{
"key": "popularity",
"band": "critical",
"name": "Popularity & adoption",
"note": null,
"notes": [],
"value": 1,
"inputs": {
"forks": 1,
"stars": 2,
"watchers": 0,
"growth_state": "unverified",
"growth_factor_pct": 100,
"growth_unverified_reason": "no_history"
},
"components": [
{
"key": "stars",
"name": "Stars",
"detail": "2 stars",
"points": 0,
"status": "missed",
"details": [
{
"code": "stars",
"params": {
"count": 2
}
}
],
"max_points": 60
},
{
"key": "forks",
"name": "Forks",
"detail": "1 forks",
"points": 0,
"status": "missed",
"details": [
{
"code": "forks",
"params": {
"count": 1
}
}
],
"max_points": 25
},
{
"key": "watchers",
"name": "Watchers",
"detail": "0 watchers",
"points": 0,
"status": "missed",
"details": [
{
"code": "watchers",
"params": {
"count": 0
}
}
],
"max_points": 15
}
]
},
{
"key": "community_health",
"band": "moderate",
"name": "Community health",
"note": null,
"notes": [],
"value": 50,
"inputs": {
"has_readme": true,
"has_license": true,
"has_contributing": false,
"has_issue_template": false,
"has_code_of_conduct": false,
"has_pull_request_template": false
},
"components": [
{
"key": "readme",
"name": "README",
"detail": null,
"points": 22.5,
"status": "met",
"details": [],
"max_points": 22.5
},
{
"key": "license",
"name": "License",
"detail": "recognized license (GPL-3.0)",
"points": 22.5,
"status": "met",
"details": [
{
"code": "license_standard",
"params": {}
},
{
"code": "license_spdx",
"params": {
"spdx": "GPL-3.0"
}
}
],
"max_points": 22.5
},
{
"key": "contributing_guide",
"name": "CONTRIBUTING guide",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 18
},
{
"key": "code_of_conduct",
"name": "Code of conduct",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 13.5
},
{
"key": "issue_template",
"name": "Issue template",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.2
},
{
"key": "pr_template",
"name": "PR template",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 6.3
}
]
}
],
"description": "Does the project have users, downloads, attention, and a welcoming setup for contributors?"
},
{
"key": "governance",
"band": "at_risk",
"name": "Sustainability & Governance",
"value": 49,
"weight": 0.24,
"metrics": [
{
"key": "maintainer_resilience",
"band": "critical",
"name": "Maintainer resilience (bus factor)",
"note": null,
"notes": [],
"value": 10,
"inputs": {
"bus_factor": 1,
"contributors_sampled": 1,
"top_contributor_share": 1
},
"components": [
{
"key": "bus_factor",
"name": "Bus factor",
"detail": "1 contributor(s) cover half of all commits",
"points": 9,
"status": "partial",
"details": [
{
"code": "bus_factor",
"params": {
"count": 1
}
}
],
"max_points": 54
},
{
"key": "commit_distribution",
"name": "Commit distribution",
"detail": "top contributor authored 100% of commits",
"points": 0,
"status": "missed",
"details": [
{
"code": "top_contributor_share",
"params": {
"share": 100
}
}
],
"max_points": 22.5
},
{
"key": "contributor_breadth",
"name": "Contributor breadth",
"detail": "1 contributors",
"points": 1.4,
"status": "partial",
"details": [
{
"code": "contributors_sampled",
"params": {
"count": 1
}
}
],
"max_points": 13.5
},
{
"key": "openssf_scorecard_contributors",
"name": "OpenSSF Scorecard: Contributors",
"detail": "project has 0 contributing companies or organizations -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 10
}
]
},
{
"key": "responsiveness",
"band": "at_risk",
"name": "Issue & PR responsiveness",
"note": "Excluded from scoring (no data or not applicable): Issue resolution. Remaining weights renormalized.",
"notes": [
{
"code": "excluded_no_data",
"params": {
"components": [
"issue_resolution"
]
}
},
{
"code": "weights_renormalized",
"params": {}
}
],
"value": 45,
"inputs": {
"merged_prs": 5,
"open_issues": 0,
"closed_issues": 0,
"issue_closed_ratio": null,
"closed_unmerged_prs": 3
},
"components": [
{
"key": "issue_resolution",
"name": "Issue resolution",
"detail": "no issues or no data",
"points": 0,
"status": "excluded",
"details": [
{
"code": "no_issues_or_data",
"params": {}
}
],
"max_points": 46.75
},
{
"key": "pr_acceptance",
"name": "PR acceptance",
"detail": "5/8 decided PRs merged",
"points": 23.9,
"status": "partial",
"details": [
{
"code": "decided_prs_merged",
"params": {
"merged": 5,
"decided": 8
}
}
],
"max_points": 38.25
},
{
"key": "openssf_scorecard_code_review",
"name": "OpenSSF Scorecard: Code-Review",
"detail": "Found 0/12 approved changesets -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 15
}
]
},
{
"key": "stewardship",
"band": "moderate",
"name": "Ownership & stewardship",
"note": "Excluded from scoring (no data or not applicable): Verified domain. Remaining weights renormalized.",
"notes": [
{
"code": "excluded_no_data",
"params": {
"components": [
"verified_domain"
]
}
},
{
"code": "weights_renormalized",
"params": {}
}
],
"value": 58,
"inputs": {
"followers": 42,
"owner_type": "User",
"is_verified": null,
"owner_login": "agporto",
"public_repos": 118,
"account_age_days": 3639
},
"components": [
{
"key": "ownership_backing",
"name": "Ownership backing",
"detail": "personal (user) account",
"points": 10,
"status": "partial",
"details": [
{
"code": "owner_personal",
"params": {}
}
],
"max_points": 30
},
{
"key": "verified_domain",
"name": "Verified domain",
"detail": "not applicable to user accounts",
"points": 0,
"status": "excluded",
"details": [
{
"code": "not_applicable_to_user_accounts",
"params": {}
}
],
"max_points": 20
},
{
"key": "owner_reach",
"name": "Owner reach",
"detail": "42 followers of agporto",
"points": 11.7,
"status": "partial",
"details": [
{
"code": "owner_followers",
"params": {
"count": 42,
"login": "agporto"
}
}
],
"max_points": 25
},
{
"key": "track_record",
"name": "Track record",
"detail": "118 public repos, account ~9 yr old",
"points": 25,
"status": "met",
"details": [
{
"code": "public_repos",
"params": {
"count": 118
}
},
{
"code": "account_age_years",
"params": {
"years": 9
}
}
],
"max_points": 25
}
]
},
{
"key": "package_maintenance",
"band": "excellent",
"name": "Package maintenance",
"note": null,
"notes": [],
"value": 100,
"inputs": {
"packages": [
"biocpd"
],
"ecosystems": "pypi",
"any_deprecated": false,
"min_days_since_publish": 7
},
"components": [
{
"key": "published_resolvable",
"name": "Published & resolvable",
"detail": "1 package(s) on pypi",
"points": 25,
"status": "met",
"details": [
{
"code": "packages_published",
"params": {
"count": 1,
"ecosystems": "pypi"
}
}
],
"max_points": 25
},
{
"key": "publish_recency",
"name": "Publish recency",
"detail": "latest publish 7 days ago",
"points": 35,
"status": "met",
"details": [
{
"code": "publish_recency",
"params": {
"days": 7
}
}
],
"max_points": 35
},
{
"key": "version_history",
"name": "Version history",
"detail": "5 published versions",
"points": 20,
"status": "met",
"details": [
{
"code": "published_versions",
"params": {
"count": 5
}
}
],
"max_points": 20
},
{
"key": "not_deprecated",
"name": "Not deprecated",
"detail": "active, not deprecated or yanked",
"points": 20,
"status": "met",
"details": [
{
"code": "package_not_deprecated",
"params": {}
}
],
"max_points": 20
}
]
}
],
"description": "Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?"
},
{
"key": "engineering",
"band": "moderate",
"name": "Engineering Quality",
"value": 65,
"weight": 0.2,
"metrics": [
{
"key": "engineering_practices",
"band": "moderate",
"name": "Engineering practices",
"note": null,
"notes": [],
"value": 68,
"inputs": {
"has_ci": true,
"has_tests": true,
"has_editorconfig": false,
"has_linter_config": false,
"has_precommit_config": false
},
"components": [
{
"key": "ci_workflows",
"name": "CI workflows",
"detail": "2 workflow(s)",
"points": 24,
"status": "met",
"details": [
{
"code": "ci_workflows",
"params": {
"count": 2
}
}
],
"max_points": 24
},
{
"key": "tests_present",
"name": "Tests present",
"detail": null,
"points": 24,
"status": "met",
"details": [],
"max_points": 24
},
{
"key": "linter_config",
"name": "Linter config",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 16
},
{
"key": "pre_commit_hooks",
"name": "Pre-commit hooks",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 9.6
},
{
"key": "editorconfig",
"name": ".editorconfig",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 6.4
},
{
"key": "openssf_scorecard_ci_tests",
"name": "OpenSSF Scorecard: CI-Tests",
"detail": "4 out of 4 merged PRs checked by a CI test -- score normalized to 10",
"points": 20,
"status": "met",
"details": [],
"max_points": 20
}
]
},
{
"key": "documentation",
"band": "moderate",
"name": "Documentation",
"note": null,
"notes": [],
"value": 60,
"inputs": {
"topics": [
"biological-modeling",
"expectation-maximization",
"point-cloud",
"python",
"registration",
"statistical-shape-model"
],
"has_wiki": true,
"homepage": null,
"has_readme": true,
"has_docs_dir": false,
"has_description": true
},
"components": [
{
"key": "readme",
"name": "README",
"detail": null,
"points": 30,
"status": "met",
"details": [],
"max_points": 30
},
{
"key": "documentation_directory",
"name": "Documentation directory",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 25
},
{
"key": "documentation_homepage_site",
"name": "Documentation / homepage site",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 15
},
{
"key": "repository_description",
"name": "Repository description",
"detail": null,
"points": 10,
"status": "met",
"details": [],
"max_points": 10
},
{
"key": "topics",
"name": "Topics",
"detail": "6 topics",
"points": 10,
"status": "met",
"details": [
{
"code": "topics_count",
"params": {
"count": 6
}
}
],
"max_points": 10
},
{
"key": "wiki",
"name": "Wiki",
"detail": null,
"points": 10,
"status": "met",
"details": [],
"max_points": 10
}
]
}
],
"description": "Are baseline engineering and documentation practices in place?"
},
{
"key": "security",
"band": "moderate",
"name": "Security",
"value": 52,
"weight": 0.16,
"metrics": [
{
"key": "security_posture",
"band": "at_risk",
"name": "Security posture",
"note": "Excluded from scoring (no data or not applicable): Packaging, Signed-Releases. Remaining weights renormalized.",
"notes": [
{
"code": "excluded_no_data",
"params": {
"components": [
"packaging",
"signed_releases"
]
}
},
{
"code": "weights_renormalized",
"params": {}
}
],
"value": 40,
"inputs": {
"source": "openssf_scorecard",
"checks_evaluated": 16,
"scorecard_version": "v5.5.0",
"checks_inconclusive": 2,
"scorecard_aggregate": 4.1
},
"components": [
{
"key": "binary_artifacts",
"name": "Binary-Artifacts",
"detail": "no binaries found in the repo",
"points": 7.5,
"status": "met",
"details": [],
"max_points": 7.5
},
{
"key": "branch_protection",
"name": "Branch-Protection",
"detail": "branch protection is not maximal on development and all release branches",
"points": 2.2,
"status": "partial",
"details": [],
"max_points": 7.5
},
{
"key": "ci_tests",
"name": "CI-Tests",
"detail": "4 out of 4 merged PRs checked by a CI test -- score normalized to 10",
"points": 2.5,
"status": "met",
"details": [],
"max_points": 2.5
},
{
"key": "cii_best_practices",
"name": "CII-Best-Practices",
"detail": "no effort to earn an OpenSSF best practices badge detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 2.5
},
{
"key": "code_review",
"name": "Code-Review",
"detail": "Found 0/12 approved changesets -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
},
{
"key": "contributors",
"name": "Contributors",
"detail": "project has 0 contributing companies or organizations -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 2.5
},
{
"key": "dangerous_workflow",
"name": "Dangerous-Workflow",
"detail": "no dangerous workflow patterns detected",
"points": 10,
"status": "met",
"details": [],
"max_points": 10
},
{
"key": "dependency_update_tool",
"name": "Dependency-Update-Tool",
"detail": "no update tool detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
},
{
"key": "fuzzing",
"name": "Fuzzing",
"detail": "project is not fuzzed",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "license",
"name": "License",
"detail": "license file detected",
"points": 2.5,
"status": "met",
"details": [],
"max_points": 2.5
},
{
"key": "maintained",
"name": "Maintained",
"detail": "18 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10",
"points": 7.5,
"status": "met",
"details": [],
"max_points": 7.5
},
{
"key": "packaging",
"name": "Packaging",
"detail": "packaging workflow not detected",
"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
"params": {}
}
],
"max_points": 5
},
{
"key": "pinned_dependencies",
"name": "Pinned-Dependencies",
"detail": "dependency not pinned by hash detected -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "sast",
"name": "SAST",
"detail": "SAST tool is not run on all commits -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "security_policy",
"name": "Security-Policy",
"detail": "security policy file not detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "signed_releases",
"name": "Signed-Releases",
"detail": "no releases found",
"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
"params": {}
}
],
"max_points": 7.5
},
{
"key": "token_permissions",
"name": "Token-Permissions",
"detail": "detected GitHub workflow tokens with excessive permissions",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
},
{
"key": "vulnerabilities",
"name": "Vulnerabilities",
"detail": "3 existing vulnerabilities detected",
"points": 5.2,
"status": "partial",
"details": [],
"max_points": 7.5
}
]
},
{
"key": "dependency_advisories",
"band": "excellent",
"name": "Dependency advisories",
"note": "Excluded from scoring (no data or not applicable): No advisories left outstanding. Remaining weights renormalized. Matched the pypi:biocpd@1.3.0 runtime dependency closure — what installing the published package pulls in — 16 packages. Reachability is not analyzed.",
"notes": [
{
"code": "excluded_no_data",
"params": {
"components": [
"no_advisories_left_outstanding"
]
}
},
{
"code": "weights_renormalized",
"params": {}
},
{
"code": "advisories_scope_published",
"params": {
"package": "pypi:biocpd@1.3.0",
"assessed": 16
}
},
{
"code": "advisories_reachability",
"params": {}
}
],
"value": 100,
"inputs": {
"source": "osv",
"advisories": 0,
"affected_packages": 0,
"assessed_packages": 16,
"unassessed_packages": 0,
"affected_by_severity": "none",
"direct_affected_packages": 0
},
"components": [
{
"key": "direct_dependencies_free_of_known_advisories",
"name": "Direct dependencies free of known advisories",
"detail": "no direct dependency carries a known advisory",
"points": 35,
"status": "met",
"details": [
{
"code": "no_direct_advisories",
"params": {}
}
],
"max_points": 35
},
{
"key": "indirect_dependencies_free_of_known_advisories",
"name": "Indirect dependencies free of known advisories",
"detail": "no indirect dependency carries a known advisory",
"points": 25,
"status": "met",
"details": [
{
"code": "no_indirect_advisories",
"params": {}
}
],
"max_points": 25
},
{
"key": "no_advisories_left_outstanding",
"name": "No advisories left outstanding",
"detail": "no advisory carries a publication date",
"points": 0,
"status": "excluded",
"details": [
{
"code": "advisories_no_publication_date",
"params": {}
}
],
"max_points": 40
}
]
},
{
"key": "malicious_dependencies",
"band": "excellent",
"name": "Malicious dependencies",
"note": null,
"notes": [],
"value": 100,
"inputs": {
"source": "osv",
"meaning": "reported as a malicious package by the OpenSSF corpus; the remedy is removal or moving off the compromised name, never an upgrade of the same artifact. Versions the registry has since pulled are listed but not scored",
"packages": [],
"red_flag": false,
"assessed_packages": 16,
"malicious_packages": 0,
"direct_malicious_packages": 0,
"withdrawn_malicious_packages": 0,
"installable_malicious_packages": 0
},
"components": [
{
"key": "no_dependency_reported_as_a_malicious_package",
"name": "No dependency reported as a malicious package",
"detail": "no dependency is reported as a malicious package",
"points": 100,
"status": "met",
"details": [
{
"code": "no_malicious_dependencies",
"params": {}
}
],
"max_points": 100
}
]
},
{
"key": "high_risk_jurisdiction_exposure",
"band": "excellent",
"name": "High-Risk Jurisdiction Exposure",
"note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
"notes": [
{
"code": "jurisdiction_evidence_limits",
"params": {}
}
],
"value": 100,
"inputs": {
"meaning": "self-published location evidence; not nationality or citizenship",
"red_flag": false,
"exposures": [],
"policy_countries": [
"Russia",
"Iran",
"North Korea"
],
"review_only_matches": 0,
"assessed_self_published_locations": 2
},
"components": [
{
"key": "policy_exposure_multiplier",
"name": "Policy exposure multiplier",
"detail": "no confirmed policy-scope location match",
"points": 100,
"status": "met",
"details": [
{
"code": "jurisdiction_no_match",
"params": {}
}
],
"max_points": 100
}
]
}
],
"description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
},
{
"key": "ai_readiness",
"band": "at_risk",
"name": "AI Readiness",
"value": 30,
"weight": 0,
"metrics": [
{
"key": "ai_agent_context",
"band": "critical",
"name": "Agent context & guidance",
"note": null,
"notes": [],
"value": 14,
"inputs": {
"has_llms_txt": false,
"legible_history_share": 0.27,
"agent_instruction_files": [],
"agent_instruction_max_bytes": null
},
"components": [
{
"key": "agent_instructions",
"name": "Agent instructions",
"detail": "no CLAUDE.md / AGENTS.md / editor rules",
"points": 0,
"status": "missed",
"details": [
{
"code": "no_agent_instructions",
"params": {}
}
],
"max_points": 45
},
{
"key": "machine_readable_docs_llms_txt",
"name": "Machine-readable docs (llms.txt)",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 15
},
{
"key": "legible_commit_history",
"name": "Legible commit history",
"detail": "10 of 37 human commits state their intent (structured subject or explanatory body)",
"points": 14.4,
"status": "partial",
"details": [
{
"code": "legible_history",
"params": {
"legible": 10,
"sampled": 37
}
}
],
"max_points": 40
}
]
},
{
"key": "ai_verify_loop",
"band": "at_risk",
"name": "Verify loop (build / test / typecheck)",
"note": null,
"notes": [],
"value": 32,
"inputs": {
"has_nix": false,
"has_tests": true,
"lockfiles": [],
"has_dockerfile": false,
"typed_language": false,
"bootstrap_files": [],
"has_devcontainer": false,
"has_linter_config": false,
"typecheck_configs": [],
"agent_commit_share": 0.081,
"toolchain_manifests": [],
"dependency_bot_commit_share": 0
},
"components": [
{
"key": "one_command_bootstrap",
"name": "One-command bootstrap",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 18
},
{
"key": "automated_tests",
"name": "Automated tests",
"detail": null,
"points": 22,
"status": "met",
"details": [],
"max_points": 22
},
{
"key": "lint_format_config",
"name": "Lint / format config",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 11
},
{
"key": "static_type_checking",
"name": "Static type checking",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 11
},
{
"key": "reproducible_environment",
"name": "Reproducible environment",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 10
},
{
"key": "demonstrated_agent_practice",
"name": "Demonstrated agent practice",
"detail": "3 of the last 37 commits agent-authored or agent-credited",
"points": 10,
"status": "met",
"details": [
{
"code": "agent_authored_commits",
"params": {
"count": 3,
"sampled": 37
}
}
],
"max_points": 10
},
{
"key": "automated_maintenance",
"name": "Automated maintenance",
"detail": "no automated dependency updates observed",
"points": 0,
"status": "missed",
"details": [
{
"code": "no_dependency_automation",
"params": {}
}
],
"max_points": 8
},
{
"key": "openssf_scorecard_pinned_dependencies",
"name": "OpenSSF Scorecard: Pinned-Dependencies",
"detail": "dependency not pinned by hash detected -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 10
}
]
},
{
"key": "ai_code_legibility",
"band": "moderate",
"name": "Code legibility for models",
"note": null,
"notes": [],
"value": 55,
"inputs": {
"primary_language": "Python",
"largest_source_bytes": 32880,
"source_files_sampled": 21,
"oversized_source_files": 0
},
"components": [
{
"key": "type_checkable_code",
"name": "Type-checkable code",
"detail": "Python without a type-check config",
"points": 0,
"status": "missed",
"details": [
{
"code": "no_typecheck_config_language",
"params": {
"language": "Python"
}
}
],
"max_points": 45
},
{
"key": "manageable_file_sizes",
"name": "Manageable file sizes",
"detail": "0/21 source files over 60KB",
"points": 55,
"status": "met",
"details": [
{
"code": "oversized_source_files",
"params": {
"kb": 60,
"sampled": 21,
"oversized": 0
}
}
],
"max_points": 55
}
]
}
],
"description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
}
],
"metrics_version": "1.13.0"
},
"warnings": [
"Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token",
"GitHub dependency-graph SBOM unavailable (404); the dependency graph may be disabled for this repository"
],
"report_type": "repository",
"generated_at": "2026-07-26T09:17:38.416968Z",
"schema_version": "0.27.0",
"badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/a/agporto/biocpd.svg",
"full_name": "agporto/biocpd",
"license_state": "standard",
"license_spdx": "GPL-3.0"
}Scores are signals, not warranties. They reflect publicly visible practices on GitHub — not a code audit, and not a security guarantee.
Missing data is excluded and weights renormalized, never scored as zero. Methodology is versioned and open: metrics v1.13.0, schema v0.27.0 — full methodology · metrics wiki.
How one result sits in the wider record: aggregate statistics — PyPI.