Public record
Software health reportschema 0.27.0 · metrics 1.13.0 · 2026-07-26 17:34 UTC

cheminfo / mass-tools

Various projects dealing with molecular formula

JavaScript · TypeScriptMIT★ 9 stars⑂ 0 forkssince Nov 2017View on GitHub ↗

cheminfo/mass-tools holds a health index of 64 out of 100, placing it in the Moderate band. It scores highest on Vitality (81/100) and lowest on Community & Adoption (42/100). It was last updated today. A single contributor accounts for most of its recent work.

64
overall / 100
Moderate

Software health index

Metrics are grouped into weighted categories on one standardized 1–100 scale. Overall starts as their weighted mean; when public evidence triggers the High-Risk Jurisdiction Policy, the rating is adjusted and receives an At risk ceiling of 49. AI Readiness sits outside the overall score.

64
Excellent85-100Exemplary; meets essentially all checked criteria
Good70-84Healthy; minor gaps
Moderate50-69Acceptable with notable gaps; review recommended
At risk30-49Significant weaknesses; adoption warrants caution
Critical1-29Severe problems (abandoned, single-maintainer, no hygiene)
VitalityCommunity &AdoptionSustainability &GovernanceEngineeringQualitySecurityAI Readiness

Score profile

Each axis is a category. The shape matters more than the average — a healthy subject fills the whole shape, while a spike-and-crater profile means strength in one dimension is masking risk in another.

Ownership

CheminfoOrganization
63 followers270 public repossince Oct 2012

This repository is backed by an organization — shared, accountable stewardship that can outlive any single maintainer.

Package ecosystems

RegistryPackageVersionDownloads / moVersionsLast publish
npmemdb3.5.41,4111520 days ago
npmmf-finder3.4.243,511976 days ago
npmmf-global3.1.369991360 days ago
npmmf-parser3.9.216,371866 days ago
npmms-report3.2.261,180826 days ago
npmmass-tools2.3.101,0301380 days ago
npmmf-from-ea2.1.24522616 days ago
npmmf-matcher3.3.23,474926 days ago

Metrics by category

Vitality

Is the project alive — is code being written and are releases shipping?

81Good · 22% of overall

Development activity

69Moderate
How it's scored
36/36Push recency — last push 0 days ago
6.9/36Commit cadence — 10/52 weeks with commits
16/18Commit volume — 60 commits in the last year
10/10OpenSSF Scorecard: Maintained — 23 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10
Inputs used
commits_last_year60
human_commit_share1
days_since_last_push0
active_weeks_last_year10

Release discipline

100Excellent
How it's scored
27/27Ships releases — 100 releases published
36/36Release recency — latest release 0 days ago
27/27Release cadence — a release every ~38.8 days
0/10OpenSSF Scorecard: Signed-Releases — no data
Inputs used
releases_count100
latest_release_tagv7.59.0
releases_from_tagsno
days_since_latest_release0
mean_days_between_releases38.8
Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Signed-Releases. Remaining weights renormalized.

Community & Adoption

Does the project have users, downloads, attention, and a welcoming setup for contributors?

42At risk · 18% of overall

Popularity & adoption

16Critical
How it's scored
14.6/60Stars — 9 stars
0/25Forks — 0 forks
1.7/15Watchers — 3 watchers
Inputs used
forks0
stars9
watchers3
growth_stateunverified
growth_factor_pct100
growth_unverified_reasonno_history

Community health

50Moderate
How it's scored
22.5/22.5README
22.5/22.5License — recognized license (MIT)
0/18CONTRIBUTING guide
0/13.5Code of conduct
0/7.2Issue template
0/6.3PR template
Inputs used
has_readmeyes
has_licenseyes
has_contributingno
has_issue_templateno
has_code_of_conductno
has_pull_request_templateno

Ecosystem adoption (downloads)

74Good
How it's scored
59.4/80Monthly downloads — 28,498 downloads/month across npm
0/20Registry dependents — not reported by this ecosystem
Inputs used
packagesemdb, mf-finder, mf-global, mf-parser, ms-report, mass-tools, mf-from-ea, mf-matcher
dependents—
ecosystemsnpm
total_downloads—
monthly_downloads28,498
Excluded from scoring (no data or not applicable): Registry dependents. Remaining weights renormalized.

Sustainability & Governance

Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?

63Moderate · 24% of overall

Maintainer resilience (bus factor)

33At risk
How it's scored
9/54Bus factor — 1 contributor(s) cover half of all commits
7.4/22.5Commit distribution — top contributor authored 67% of commits
6.8/13.5Contributor breadth — 5 contributors
10/10OpenSSF Scorecard: Contributors — project has 16 contributing companies or organizations
Inputs used
bus_factor1
contributors_sampled5
top_contributor_share0.67

Issue & PR responsiveness

63Moderate
How it's scored
23/46.8Issue resolution — 49% of issues closed
36.6/38.3PR acceptance — 258/270 decided PRs merged
3/15OpenSSF Scorecard: Code-Review — Found 6/23 approved changesets -- score normalized to 2
Inputs used
merged_prs258
open_issues28
closed_issues27
issue_closed_ratio0.491
closed_unmerged_prs12

Ownership & stewardship

68Moderate
How it's scored
30/30Ownership backing — organization-owned
0/20Verified domain
13/25Owner reach — 63 followers of cheminfo
25/25Track record — 270 public repos, account ~13 yr old
Inputs used
followers63
owner_typeOrganization
is_verified—
owner_logincheminfo
public_repos270
account_age_days5,035

Package maintenance

100Excellent
How it's scored
25/25Published & resolvable — 8 package(s) on npm
35/35Publish recency — latest publish 0 days ago
20/20Version history — 152 published versions
20/20Not deprecated — active, not deprecated or yanked
Inputs used
packagesemdb, mf-finder, mf-global, mf-parser, ms-report, mass-tools, mf-from-ea, mf-matcher
ecosystemsnpm
any_deprecatedno
min_days_since_publish0

Engineering Quality

Are baseline engineering and documentation practices in place?

72Good · 20% of overall

Engineering practices

84Good
How it's scored
24/24CI workflows — 4 workflow(s)
24/24Tests present
16/16Linter config — eslint.config.mjs
0/9.6Pre-commit hooks
0/6.4.editorconfig
20/20OpenSSF Scorecard: CI-Tests — 17 out of 17 merged PRs checked by a CI test -- score normalized to 10
Inputs used
has_ciyes
has_testsyes
has_editorconfigno
has_linter_configyes
has_precommit_configno

Documentation

55Moderate
How it's scored
30/30README
0/25Documentation directory
15/15Documentation / homepage site — https://cheminfo.github.io/mass-tools/
10/10Repository description
0/10Topics
0/10Wiki
Inputs used
topics—
has_wikino
homepagehttps://cheminfo.github.io/mass-tools/
has_readmeyes
has_docs_dirno
has_descriptionyes

Security

Are visible security and supply-chain practices strong, without unresolved high-risk jurisdiction exposure?

55Moderate · 16% of overall

Security posture

44At risk
How it's scored
7.5/7.5Binary-Artifacts — no binaries found in the repo
2.2/7.5Branch-Protection — branch protection is not maximal on development and all release branches
2.5/2.5CI-Tests — 17 out of 17 merged PRs checked by a CI test -- score normalized to 10
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
1.5/7.5Code-Review — Found 6/23 approved changesets -- score normalized to 2
2.5/2.5Contributors — project has 16 contributing companies or organizations
10/10Dangerous-Workflow — no dangerous workflow patterns detected
0/7.5Dependency-Update-Tool — no update tool detected
0/5Fuzzing — project is not fuzzed
2.5/2.5License — license file detected
7.5/7.5Maintained — 23 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10
5/5Packaging — packaging workflow detected
1.5/5Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 3
0/5SAST — SAST tool is not run on all commits -- score normalized to 0
0/5Security-Policy — security policy file not detected
0/7.5Signed-Releases — no data
0/7.5Token-Permissions — detected GitHub workflow tokens with excessive permissions
0/7.5Vulnerabilities — 21 existing vulnerabilities detected
Inputs used
sourceopenssf_scorecard
checks_evaluated17
scorecard_versionv5.5.0
checks_inconclusive1
scorecard_aggregate4.4
Excluded from scoring (no data or not applicable): signed_releases. Remaining weights renormalized.

Dependency advisories

100Excellent
How it's scored
35/35Direct dependencies free of known advisories — no direct dependency carries a known advisory
0/25Indirect dependencies free of known advisories — transitive set not separable from development and test dependencies in this scope
0/40No advisories left outstanding — no advisory carries a publication date
Inputs used
sourceosv
advisories23
affected_packages7
assessed_packages1,300
unassessed_packages44
affected_by_severityhigh 6, moderate 1
direct_affected_packages0
Excluded from scoring (no data or not applicable): Indirect dependencies free of known advisories, No advisories left outstanding. Remaining weights renormalized. Matched 1300 resolved dependencies against OSV. 44 could not be assessed — no resolved version, an unsupported ecosystem, or beyond the reported package list. This repository publishes no package the index resolves, so the repository dependency graph was assessed instead. That graph mixes development and test pins with shipped dependencies, so only the declared runtime dependencies are scored; transitive findings are reported as context and excluded from the score. Reachability is not analyzed.

AI Readiness

How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score.

54Moderate · 0% of overall

Agent context & guidance

40At risk
How it's scored
0/45Agent instructions — no CLAUDE.md / AGENTS.md / editor rules
0/15Machine-readable docs (llms.txt)
40/40Legible commit history — 98 of 100 human commits state their intent (structured subject or explanatory body)
Inputs used
has_llms_txtno
legible_history_share0.98
agent_instruction_files—
agent_instruction_max_bytes—

Verify loop (build / test / typecheck)

59Moderate
How it's scored
0/18One-command bootstrap
22/22Automated tests
11/11Lint / format config — eslint.config.mjs
11/11Static type checking — packages/atom-sorter/tsconfig.json, packages/chemical-elements/tsconfig.json, packages/chemical-groups/tsconfig.json, packages/emdb/tsconfig.json, packages/isotopic-distribution/tsconfig.json, packages/mass-fragmentation/tsconfig.json, packages/mass-tools/tsconfig.json, packages/mf-finder/tsconfig.json, packages/mf-from-atomic-ratio/tsconfig.json, packages/mf-from-ea/tsconfig.json, packages/mf-from-google-sheet/tsconfig.json, packages/mf-generator/tsconfig.json, packages/mf-global/tsconfig.json, packages/mf-matcher/tsconfig.json, packages/mf-parser/tsconfig.json, packages/mf-utilities/tsconfig.json, packages/mfs-deconvolution/tsconfig.json, packages/ms-report/tsconfig.json, packages/ms-spectrum/tsconfig.json, packages/nucleotide/tsconfig.json, packages/number-treemap/tsconfig.json, packages/octochemdb/tsconfig.json, packages/peptide/tsconfig.json, tsconfig.json
10/10Reproducible environment — lockfile
2/10Demonstrated agent practice — 1 of the last 100 commits agent-authored or agent-credited
0/8Automated maintenance — no automated dependency updates observed
3/10OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 3
Inputs used
has_nixno
has_testsyes
lockfilespackage-lock.json
has_dockerfileno
typed_languageno
bootstrap_files—
has_devcontainerno
has_linter_configyes
typecheck_configspackages/atom-sorter/tsconfig.json, packages/chemical-elements/tsconfig.json, packages/chemical-groups/tsconfig.json, packages/emdb/tsconfig.json, packages/isotopic-distribution/tsconfig.json, packages/mass-fragmentation/tsconfig.json, packages/mass-tools/tsconfig.json, packages/mf-finder/tsconfig.json, packages/mf-from-atomic-ratio/tsconfig.json, packages/mf-from-ea/tsconfig.json, packages/mf-from-google-sheet/tsconfig.json, packages/mf-generator/tsconfig.json, packages/mf-global/tsconfig.json, packages/mf-matcher/tsconfig.json, packages/mf-parser/tsconfig.json, packages/mf-utilities/tsconfig.json, packages/mfs-deconvolution/tsconfig.json, packages/ms-report/tsconfig.json, packages/ms-spectrum/tsconfig.json, packages/nucleotide/tsconfig.json, packages/number-treemap/tsconfig.json, packages/octochemdb/tsconfig.json, packages/peptide/tsconfig.json, tsconfig.json
agent_commit_share0.01
toolchain_manifests—
dependency_bot_commit_share0

Code legibility for models

82Good
How it's scored
27/45Type-checkable code — JavaScript with type-check config (packages/atom-sorter/tsconfig.json, packages/chemical-elements/tsconfig.json, packages/chemical-groups/tsconfig.json, packages/emdb/tsconfig.json, packages/isotopic-distribution/tsconfig.json, packages/mass-fragmentation/tsconfig.json, packages/mass-tools/tsconfig.json, packages/mf-finder/tsconfig.json, packages/mf-from-atomic-ratio/tsconfig.json, packages/mf-from-ea/tsconfig.json, packages/mf-from-google-sheet/tsconfig.json, packages/mf-generator/tsconfig.json, packages/mf-global/tsconfig.json, packages/mf-matcher/tsconfig.json, packages/mf-parser/tsconfig.json, packages/mf-utilities/tsconfig.json, packages/mfs-deconvolution/tsconfig.json, packages/ms-report/tsconfig.json, packages/ms-spectrum/tsconfig.json, packages/nucleotide/tsconfig.json, packages/number-treemap/tsconfig.json, packages/octochemdb/tsconfig.json, packages/peptide/tsconfig.json, tsconfig.json)
54.6/55Manageable file sizes — 3/395 source files over 60KB
Inputs used
primary_languageJavaScript
largest_source_bytes160,686
source_files_sampled395
oversized_source_files3

Machine-readable interfaces

40At risk
How it's scored
0/40API schema (OpenAPI/GraphQL/proto)
0/20MCP server
40/40Runnable examples — examples
Inputs used
example_dirsexamples
has_mcp_signalno
api_schema_files—

Key facts

9GitHub stars
5contributors
60commits, last 12 months
0days since last push
100releases
1bus factor
28open issues
npmpackage ecosystems

Data collection warnings

  • Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token
  • deps.dev does not index npm:mass-tools@2.3.10; advisories assessed against the repository dependency graph instead

More detail

OpenSSF Scorecard 4.4 / 10
4.4aggregate

Independent, tool-agnostic security assessment from the open-source OpenSSF Scorecard. Each check rewards a security practice, not a specific vendor's tool. Checks Scorecard could not determine are marked n/a and excluded from the security score (never counted as zero).Scorecard v5.5.0 · 2026-07-26 17:34 UTC

10Binary-Artifactsno binaries found in the repo
3Branch-Protectionbranch protection is not maximal on development and all release branches
10CI-Tests17 out of 17 merged PRs checked by a CI test -- score normalized to 10
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
2Code-ReviewFound 6/23 approved changesets -- score normalized to 2
10Contributorsproject has 16 contributing companies or organizations
10Dangerous-Workflowno dangerous workflow patterns detected
0Dependency-Update-Toolno update tool detected
0Fuzzingproject is not fuzzed
10Licenselicense file detected
10Maintained23 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10
10Packagingpackaging workflow detected
3Pinned-Dependenciesdependency not pinned by hash detected -- score normalized to 3
0SASTSAST tool is not run on all commits -- score normalized to 0
0Security-Policysecurity policy file not detected
n/aSigned-Releasesno releases found
0Token-Permissionsdetected GitHub workflow tokens with excessive permissions
0Vulnerabilities21 existing vulnerabilities detected
Direct dependencies 111
RegistryPackageVersion constraintManifest
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All dependencies 1,344

Full resolved dependency set from the GitHub dependency graph: 58 direct and 1,286 indirect (transitive) packages. The transitive closure is complete when the repository commits a lockfile.

RegistryPackageVersionRelation
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Dependency advisories 7

This repository publishes no package the index resolves, so its own dependency graph was assessed — 1,300 packages, which also include development and test pins that never ship: 7 carry known advisories, of which 0 are direct. 44 could not be assessed — no resolved version, an unsupported ecosystem, or beyond the reported package list.

PackageVersionRelationSeverityAdvisoriesFixed in
axios1.16.0indirecthigh101.18.0
brace-expansion1.1.16indirecthigh15.0.8
brace-expansion2.1.2indirecthigh15.0.8
brace-expansion5.0.6indirecthigh25.0.8
js-yaml4.1.1indirecthigh24.3.0
tar7.5.11indirecthigh67.5.21
vue-template-compiler2.7.16indirectmoderate1—

An advisory means the version recorded in the dependency graph falls inside an advisory’s affected range. Reachability is not analysed, and the graph includes development and test pins — a finding may concern tooling rather than shipped software.

Raw JSON report machine-readable
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            "reason": "no binaries found in the repo",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#binary-artifacts"
          },
          {
            "name": "Branch-Protection",
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            "reason": "branch protection is not maximal on development and all release branches",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#branch-protection"
          },
          {
            "name": "CI-Tests",
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            "reason": "17 out of 17 merged PRs checked by a CI test -- score normalized to 10",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#ci-tests"
          },
          {
            "name": "CII-Best-Practices",
            "score": 0,
            "reason": "no effort to earn an OpenSSF best practices badge detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#cii-best-practices"
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          {
            "name": "Code-Review",
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            "reason": "Found 6/23 approved changesets -- score normalized to 2",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#code-review"
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          {
            "name": "Contributors",
            "score": 10,
            "reason": "project has 16 contributing companies or organizations",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#contributors"
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          {
            "name": "Dangerous-Workflow",
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            "reason": "no dangerous workflow patterns detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dangerous-workflow"
          },
          {
            "name": "Dependency-Update-Tool",
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            "reason": "no update tool detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dependency-update-tool"
          },
          {
            "name": "Fuzzing",
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            "reason": "project is not fuzzed",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#fuzzing"
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          {
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            "reason": "license file detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#license"
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          {
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            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#maintained"
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          {
            "name": "Packaging",
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            "reason": "packaging workflow detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#packaging"
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            "name": "Pinned-Dependencies",
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            "reason": "dependency not pinned by hash detected -- score normalized to 3",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#pinned-dependencies"
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          {
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            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#sast"
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            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#security-policy"
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            "inputs": {
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                "key": "issue_resolution",
                "name": "Issue resolution",
                "detail": "49% of issues closed",
                "points": 23,
                "status": "partial",
                "details": [
                  {
                    "code": "issues_closed_share",
                    "params": {
                      "share": 49
                    }
                  }
                ],
                "max_points": 46.75
              },
              {
                "key": "pr_acceptance",
                "name": "PR acceptance",
                "detail": "258/270 decided PRs merged",
                "points": 36.6,
                "status": "partial",
                "details": [
                  {
                    "code": "decided_prs_merged",
                    "params": {
                      "merged": 258,
                      "decided": 270
                    }
                  }
                ],
                "max_points": 38.25
              },
              {
                "key": "openssf_scorecard_code_review",
                "name": "OpenSSF Scorecard: Code-Review",
                "detail": "Found 6/23 approved changesets -- score normalized to 2",
                "points": 3,
                "status": "partial",
                "details": [],
                "max_points": 15
              }
            ]
          },
          {
            "key": "stewardship",
            "band": "moderate",
            "name": "Ownership & stewardship",
            "note": null,
            "notes": [],
            "value": 68,
            "inputs": {
              "followers": 63,
              "owner_type": "Organization",
              "is_verified": null,
              "owner_login": "cheminfo",
              "public_repos": 270,
              "account_age_days": 5035
            },
            "components": [
              {
                "key": "ownership_backing",
                "name": "Ownership backing",
                "detail": "organization-owned",
                "points": 30,
                "status": "met",
                "details": [
                  {
                    "code": "owner_organization",
                    "params": {}
                  }
                ],
                "max_points": 30
              },
              {
                "key": "verified_domain",
                "name": "Verified domain",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              },
              {
                "key": "owner_reach",
                "name": "Owner reach",
                "detail": "63 followers of cheminfo",
                "points": 13,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_followers",
                    "params": {
                      "count": 63,
                      "login": "cheminfo"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "track_record",
                "name": "Track record",
                "detail": "270 public repos, account ~13 yr old",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "public_repos",
                    "params": {
                      "count": 270
                    }
                  },
                  {
                    "code": "account_age_years",
                    "params": {
                      "years": 13
                    }
                  }
                ],
                "max_points": 25
              }
            ]
          },
          {
            "key": "package_maintenance",
            "band": "excellent",
            "name": "Package maintenance",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "packages": [
                "emdb",
                "mf-finder",
                "mf-global",
                "mf-parser",
                "ms-report",
                "mass-tools",
                "mf-from-ea",
                "mf-matcher"
              ],
              "ecosystems": "npm",
              "any_deprecated": false,
              "min_days_since_publish": 0
            },
            "components": [
              {
                "key": "published_resolvable",
                "name": "Published & resolvable",
                "detail": "8 package(s) on npm",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "packages_published",
                    "params": {
                      "count": 8,
                      "ecosystems": "npm"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "publish_recency",
                "name": "Publish recency",
                "detail": "latest publish 0 days ago",
                "points": 35,
                "status": "met",
                "details": [
                  {
                    "code": "publish_recency",
                    "params": {
                      "days": 0
                    }
                  }
                ],
                "max_points": 35
              },
              {
                "key": "version_history",
                "name": "Version history",
                "detail": "152 published versions",
                "points": 20,
                "status": "met",
                "details": [
                  {
                    "code": "published_versions",
                    "params": {
                      "count": 152
                    }
                  }
                ],
                "max_points": 20
              },
              {
                "key": "not_deprecated",
                "name": "Not deprecated",
                "detail": "active, not deprecated or yanked",
                "points": 20,
                "status": "met",
                "details": [
                  {
                    "code": "package_not_deprecated",
                    "params": {}
                  }
                ],
                "max_points": 20
              }
            ]
          }
        ],
        "description": "Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?"
      },
      {
        "key": "engineering",
        "band": "good",
        "name": "Engineering Quality",
        "value": 72,
        "weight": 0.2,
        "metrics": [
          {
            "key": "engineering_practices",
            "band": "good",
            "name": "Engineering practices",
            "note": null,
            "notes": [],
            "value": 84,
            "inputs": {
              "has_ci": true,
              "has_tests": true,
              "has_editorconfig": false,
              "has_linter_config": true,
              "has_precommit_config": false
            },
            "components": [
              {
                "key": "ci_workflows",
                "name": "CI workflows",
                "detail": "4 workflow(s)",
                "points": 24,
                "status": "met",
                "details": [
                  {
                    "code": "ci_workflows",
                    "params": {
                      "count": 4
                    }
                  }
                ],
                "max_points": 24
              },
              {
                "key": "tests_present",
                "name": "Tests present",
                "detail": null,
                "points": 24,
                "status": "met",
                "details": [],
                "max_points": 24
              },
              {
                "key": "linter_config",
                "name": "Linter config",
                "detail": "eslint.config.mjs",
                "points": 16,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "eslint.config.mjs"
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                  }
                ],
                "max_points": 16
              },
              {
                "key": "pre_commit_hooks",
                "name": "Pre-commit hooks",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 9.6
              },
              {
                "key": "editorconfig",
                "name": ".editorconfig",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.4
              },
              {
                "key": "openssf_scorecard_ci_tests",
                "name": "OpenSSF Scorecard: CI-Tests",
                "detail": "17 out of 17 merged PRs checked by a CI test -- score normalized to 10",
                "points": 20,
                "status": "met",
                "details": [],
                "max_points": 20
              }
            ]
          },
          {
            "key": "documentation",
            "band": "moderate",
            "name": "Documentation",
            "note": null,
            "notes": [],
            "value": 55,
            "inputs": {
              "topics": [],
              "has_wiki": false,
              "homepage": "https://cheminfo.github.io/mass-tools/",
              "has_readme": true,
              "has_docs_dir": false,
              "has_description": true
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 30,
                "status": "met",
                "details": [],
                "max_points": 30
              },
              {
                "key": "documentation_directory",
                "name": "Documentation directory",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 25
              },
              {
                "key": "documentation_homepage_site",
                "name": "Documentation / homepage site",
                "detail": "https://cheminfo.github.io/mass-tools/",
                "points": 15,
                "status": "met",
                "details": [],
                "max_points": 15
              },
              {
                "key": "repository_description",
                "name": "Repository description",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "topics",
                "name": "Topics",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              },
              {
                "key": "wiki",
                "name": "Wiki",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          }
        ],
        "description": "Are baseline engineering and documentation practices in place?"
      },
      {
        "key": "security",
        "band": "moderate",
        "name": "Security",
        "value": 55,
        "weight": 0.16,
        "metrics": [
          {
            "key": "security_posture",
            "band": "at_risk",
            "name": "Security posture",
            "note": "Excluded from scoring (no data or not applicable): Signed-Releases. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "signed_releases"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 44,
            "inputs": {
              "source": "openssf_scorecard",
              "checks_evaluated": 17,
              "scorecard_version": "v5.5.0",
              "checks_inconclusive": 1,
              "scorecard_aggregate": 4.4
            },
            "components": [
              {
                "key": "binary_artifacts",
                "name": "Binary-Artifacts",
                "detail": "no binaries found in the repo",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "branch_protection",
                "name": "Branch-Protection",
                "detail": "branch protection is not maximal on development and all release branches",
                "points": 2.2,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "ci_tests",
                "name": "CI-Tests",
                "detail": "17 out of 17 merged PRs checked by a CI test -- score normalized to 10",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "cii_best_practices",
                "name": "CII-Best-Practices",
                "detail": "no effort to earn an OpenSSF best practices badge detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "code_review",
                "name": "Code-Review",
                "detail": "Found 6/23 approved changesets -- score normalized to 2",
                "points": 1.5,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "contributors",
                "name": "Contributors",
                "detail": "project has 16 contributing companies or organizations",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "dangerous_workflow",
                "name": "Dangerous-Workflow",
                "detail": "no dangerous workflow patterns detected",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "dependency_update_tool",
                "name": "Dependency-Update-Tool",
                "detail": "no update tool detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "fuzzing",
                "name": "Fuzzing",
                "detail": "project is not fuzzed",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "license file detected",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "maintained",
                "name": "Maintained",
                "detail": "23 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "packaging",
                "name": "Packaging",
                "detail": "packaging workflow detected",
                "points": 5,
                "status": "met",
                "details": [],
                "max_points": 5
              },
              {
                "key": "pinned_dependencies",
                "name": "Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 3",
                "points": 1.5,
                "status": "partial",
                "details": [],
                "max_points": 5
              },
              {
                "key": "sast",
                "name": "SAST",
                "detail": "SAST tool is not run on all commits -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "security_policy",
                "name": "Security-Policy",
                "detail": "security policy file not detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "signed_releases",
                "name": "Signed-Releases",
                "detail": "no releases found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "token_permissions",
                "name": "Token-Permissions",
                "detail": "detected GitHub workflow tokens with excessive permissions",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "vulnerabilities",
                "name": "Vulnerabilities",
                "detail": "21 existing vulnerabilities detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              }
            ]
          },
          {
            "key": "dependency_advisories",
            "band": "excellent",
            "name": "Dependency advisories",
            "note": "Excluded from scoring (no data or not applicable): Indirect dependencies free of known advisories, No advisories left outstanding. Remaining weights renormalized. Matched 1300 resolved dependencies against OSV; 44 could not be assessed (no resolved version, an unsupported ecosystem, or beyond the reported package list). This repository publishes no package the index resolves, so the repository dependency graph was assessed instead. That graph mixes development and test pins with shipped dependencies, so only the declared runtime dependencies are scored; transitive findings are reported as context and excluded from the score. Reachability is not analyzed.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "indirect_dependencies_free_of_known_advisories",
                    "no_advisories_left_outstanding"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              },
              {
                "code": "advisories_scope_repository",
                "params": {
                  "assessed": 1300
                }
              },
              {
                "code": "advisories_unassessed",
                "params": {
                  "count": 44
                }
              },
              {
                "code": "advisories_repo_graph_caveat",
                "params": {}
              },
              {
                "code": "advisories_reachability",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "source": "osv",
              "advisories": 23,
              "affected_packages": 7,
              "assessed_packages": 1300,
              "unassessed_packages": 44,
              "affected_by_severity": "high 6, moderate 1",
              "direct_affected_packages": 0
            },
            "components": [
              {
                "key": "direct_dependencies_free_of_known_advisories",
                "name": "Direct dependencies free of known advisories",
                "detail": "no direct dependency carries a known advisory",
                "points": 35,
                "status": "met",
                "details": [
                  {
                    "code": "no_direct_advisories",
                    "params": {}
                  }
                ],
                "max_points": 35
              },
              {
                "key": "indirect_dependencies_free_of_known_advisories",
                "name": "Indirect dependencies free of known advisories",
                "detail": "transitive set not separable from development and test dependencies in this scope",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "advisories_scope_not_separable",
                    "params": {}
                  }
                ],
                "max_points": 25
              },
              {
                "key": "no_advisories_left_outstanding",
                "name": "No advisories left outstanding",
                "detail": "no advisory carries a publication date",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "advisories_no_publication_date",
                    "params": {}
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "malicious_dependencies",
            "band": "excellent",
            "name": "Malicious dependencies",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "source": "osv",
              "meaning": "reported as a malicious package by the OpenSSF corpus; the remedy is removal or moving off the compromised name, never an upgrade of the same artifact. Versions the registry has since pulled are listed but not scored",
              "packages": [],
              "red_flag": false,
              "assessed_packages": 1300,
              "malicious_packages": 0,
              "direct_malicious_packages": 0,
              "withdrawn_malicious_packages": 0,
              "installable_malicious_packages": 0
            },
            "components": [
              {
                "key": "no_dependency_reported_as_a_malicious_package",
                "name": "No dependency reported as a malicious package",
                "detail": "no dependency is reported as a malicious package",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "no_malicious_dependencies",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          },
          {
            "key": "high_risk_jurisdiction_exposure",
            "band": "excellent",
            "name": "High-Risk Jurisdiction Exposure",
            "note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
            "notes": [
              {
                "code": "jurisdiction_evidence_limits",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "meaning": "self-published location evidence; not nationality or citizenship",
              "red_flag": false,
              "exposures": [],
              "policy_countries": [
                "Russia",
                "Iran",
                "North Korea"
              ],
              "review_only_matches": 0,
              "assessed_self_published_locations": 8
            },
            "components": [
              {
                "key": "policy_exposure_multiplier",
                "name": "Policy exposure multiplier",
                "detail": "no confirmed policy-scope location match",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "jurisdiction_no_match",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
      },
      {
        "key": "ai_readiness",
        "band": "moderate",
        "name": "AI Readiness",
        "value": 54,
        "weight": 0,
        "metrics": [
          {
            "key": "ai_agent_context",
            "band": "at_risk",
            "name": "Agent context & guidance",
            "note": null,
            "notes": [],
            "value": 40,
            "inputs": {
              "has_llms_txt": false,
              "legible_history_share": 0.98,
              "agent_instruction_files": [],
              "agent_instruction_max_bytes": null
            },
            "components": [
              {
                "key": "agent_instructions",
                "name": "Agent instructions",
                "detail": "no CLAUDE.md / AGENTS.md / editor rules",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_instructions",
                    "params": {}
                  }
                ],
                "max_points": 45
              },
              {
                "key": "machine_readable_docs_llms_txt",
                "name": "Machine-readable docs (llms.txt)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              },
              {
                "key": "legible_commit_history",
                "name": "Legible commit history",
                "detail": "98 of 100 human commits state their intent (structured subject or explanatory body)",
                "points": 40,
                "status": "met",
                "details": [
                  {
                    "code": "legible_history",
                    "params": {
                      "legible": 98,
                      "sampled": 100
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "ai_verify_loop",
            "band": "moderate",
            "name": "Verify loop (build / test / typecheck)",
            "note": null,
            "notes": [],
            "value": 59,
            "inputs": {
              "has_nix": false,
              "has_tests": true,
              "lockfiles": [
                "package-lock.json"
              ],
              "has_dockerfile": false,
              "typed_language": false,
              "bootstrap_files": [],
              "has_devcontainer": false,
              "has_linter_config": true,
              "typecheck_configs": [
                "packages/atom-sorter/tsconfig.json",
                "packages/chemical-elements/tsconfig.json",
                "packages/chemical-groups/tsconfig.json",
                "packages/emdb/tsconfig.json",
                "packages/isotopic-distribution/tsconfig.json",
                "packages/mass-fragmentation/tsconfig.json",
                "packages/mass-tools/tsconfig.json",
                "packages/mf-finder/tsconfig.json",
                "packages/mf-from-atomic-ratio/tsconfig.json",
                "packages/mf-from-ea/tsconfig.json",
                "packages/mf-from-google-sheet/tsconfig.json",
                "packages/mf-generator/tsconfig.json",
                "packages/mf-global/tsconfig.json",
                "packages/mf-matcher/tsconfig.json",
                "packages/mf-parser/tsconfig.json",
                "packages/mf-utilities/tsconfig.json",
                "packages/mfs-deconvolution/tsconfig.json",
                "packages/ms-report/tsconfig.json",
                "packages/ms-spectrum/tsconfig.json",
                "packages/nucleotide/tsconfig.json",
                "packages/number-treemap/tsconfig.json",
                "packages/octochemdb/tsconfig.json",
                "packages/peptide/tsconfig.json",
                "tsconfig.json"
              ],
              "agent_commit_share": 0.01,
              "toolchain_manifests": [],
              "dependency_bot_commit_share": 0
            },
            "components": [
              {
                "key": "one_command_bootstrap",
                "name": "One-command bootstrap",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 18
              },
              {
                "key": "automated_tests",
                "name": "Automated tests",
                "detail": null,
                "points": 22,
                "status": "met",
                "details": [],
                "max_points": 22
              },
              {
                "key": "lint_format_config",
                "name": "Lint / format config",
                "detail": "eslint.config.mjs",
                "points": 11,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "eslint.config.mjs"
                    }
                  }
                ],
                "max_points": 11
              },
              {
                "key": "static_type_checking",
                "name": "Static type checking",
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  "warnings": [
    "Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token",
    "deps.dev does not index npm:mass-tools@2.3.10; advisories assessed against the repository dependency graph instead"
  ],
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  "license_state": "standard",
  "license_spdx": "MIT"
}

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Scores are signals, not warranties. They reflect publicly visible practices on GitHub — not a code audit, and not a security guarantee.

Missing data is excluded and weights renormalized, never scored as zero. Methodology is versioned and open: metrics v1.13.0, schema v0.27.0 — full methodology · metrics wiki.

How one result sits in the wider record: aggregate statistics — npm.