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#fasta

Every repository in the public record carrying this tag — from its GitHub topics or the keywords its package registries publish. Health is measured under the same versioned methodology as the rest of the record.

16 records
Tagged “fasta”Ranked by health index
crates.io
87Excellenthealth index
rust-bio/rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
Rust★ 1,841↓ 34.1K/moOct 4, 2026
MITOct 4, 2026 · metrics 2.10.0
npm
80Excellenthealth index
GMOD/indexedfasta-js
Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi
TypeScript★ 11↓ 23.4K/moSep 18, 2026
MITSep 18, 2026 · metrics 2.10.0
npm
67Goodhealth index
GMOD/faidx-js
Index a FASTA file similar to `samtools faidx` using pure js
TypeScript · JavaScript · Shell★ 2↓ 6,430/moSep 15, 2026
MITSep 15, 2026 · metrics 2.10.0
Go
63Moderatehealth index
bebop/poly
A Go package for engineering organisms.
Go★ 737Sep 9, 2026
MITSep 9, 2026 · metrics 2.10.0
Go
62Moderatehealth index
evolbioinfo/goalign
Goalign : a set of command line tools and an API to manipulate multiple sequence alignments.
Go · Shell★ 91Sep 13, 2026
GPL-2.0Sep 13, 2026 · metrics 2.10.0
crates.io
60Moderatehealth index
noamteyssier/paraseq
A minimal copy fastq and fasta reader built for parallel support and paired end processing
Rust★ 50↓ 3,496/moSep 9, 2026
No licenseSep 9, 2026 · metrics 2.10.0
crates.io
56Moderatehealth index
lschoenm/MerKurio
Quick k-mer-based FASTA/FASTQ sequence record extraction, and SAM/BAM record filtering plus file annotation with k-mer tags.
Rust · Python★ 7↓ 6/moOct 20, 2026
MITOct 20, 2026 · metrics 2.10.0
—
53Moderatehealth index
torognes/swarm
A robust and fast clustering method for amplicon-based studies
C++★ 150Sep 18, 2026
AGPL-3.0Sep 18, 2026 · metrics 2.10.0
PyPI · npm
36Weakhealth index
smartsbio/smarts-bio-jupyterlab
No repository description published.
TypeScript★ 1↓ 64/moSep 9, 2026
MITSep 9, 2026 · metrics 2.10.0
npm
34At Riskhealth index
epam/ketcher
Web-based molecule sketcher
TypeScript★ 882Sep 12, 2026
Apache-2.0Sep 12, 2026 · metrics 2.10.0
npm
26At Riskhealth index
fishkabio/seqio
Sequencing file parsers and writers for bioinformatics data
TypeScript★ 0↓ 6,307/moSep 14, 2026
Apache-2.0Sep 14, 2026 · metrics 2.10.0
PyPI
25At Riskhealth index
brinkmanlab/BioPython-Convert
Tool to interconvert between various bioinformatics formats that BioPython supports
Roff★ 4↓ 25/moSep 8, 2026
Custom licenseSep 8, 2026 · metrics 2.10.0
npm
20At Riskhealth index
BigHat-Biosciences/msa
Modular BioJS compoment for a multiple sequence alignment
JavaScript★ 0↓ 23.2K/moSep 10, 2026
BSL-1.0Sep 10, 2026 · metrics 2.10.0
npm
20At Riskhealth index
FlyBase/react-sequence-viewer
A React wrapper around the BioJS sequence-viewer component
JavaScript★ 9↓ 103/moSep 10, 2026
MITSep 10, 2026 · metrics 2.10.0
npm
20At Riskhealth index
jupyterlab-contrib/msa
Modular BioJS component for a multiple sequence alignment
JavaScript★ 0↓ 83/moSep 9, 2026
BSL-1.0Sep 9, 2026 · metrics 2.10.0
npm
14Criticalhealth index
wilzbach/msa
Modular BioJS compoment for a multiple sequence alignment
JavaScript★ 171↓ 822/moSep 9, 2026
BSL-1.0Sep 9, 2026 · metrics 2.10.0