reproducible-research — open-source software health

PyPI

97Exceptionalhealth index

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

C++★ 1,641Aug 13, 2026

Apache-2.0Aug 13, 2026 · metrics 2.10.0

PyPI

86Excellenthealth index

cthoyt/pystow

👜 Easily pick a place to store data for your Python code.

Python★ 42Jul 21, 2026

MITJul 21, 2026 · metrics 2.10.0

PyPI

86Excellenthealth index

pipefunc/pipefunc

Lightweight fast function pipeline (DAG) creation in pure Python for scientific (HPC) workflows 🕸️🧪

Python★ 475Aug 5, 2026

MITAug 5, 2026 · metrics 2.10.0

PyPI

75Goodhealth index

scitex-ai/figrecipe

Reproducible matplotlib wrapper with mm-precision layouts

Python★ 1↓ 30.9K/moAug 16, 2026

AGPL-3.0Aug 16, 2026 · metrics 2.10.0

PyPI

75Goodhealth index

scitex-ai/scitex-dev

Dev tooling, linters & ecosystem auditor for SciTeX packages

Python★ 0↓ 52.6K/moAug 18, 2026

AGPL-3.0Aug 18, 2026 · metrics 2.10.0

Go · npm

69Goodhealth index

drpedapati/sciclaw

Paired-scientist AI assistant for reproducible research — lightweight Go runtime, lifecycle hooks, manuscript integration, 12 baseline scientific skills. PicoClaw-compatible.

Go★ 90Aug 22, 2026

Custom licenseAug 22, 2026 · metrics 2.10.0

PyPI

69Goodhealth index

fathom-lab/styxx

Verification for the agent era. Your coding agent's PR summary cannot lie about its diff - one CI line. Plus the research: the first map of which AI minds can read each other. Every claim machine-verified against committed receipts, negatives included. pip install styxx

Python★ 14↓ 2,231/moAug 19, 2026

MITAug 19, 2026 · metrics 2.10.0

PyPI

69Goodhealth index

ywatanabe1989/scitex-app

App SDK — write-once interface for local + cloud apps

Python★ 0↓ 29.6K/moJul 19, 2026

AGPL-3.0Jul 19, 2026 · metrics 2.10.0

—

67Goodhealth index

crsh/papaja

papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manuscripts from RMarkdown-files (PDF and Word documents) and helper functions that facilitate reporting statistics, tables, and plots.

HTML · R · TeX★ 692Jul 17, 2026

Custom licenseJul 17, 2026 · metrics 2.10.0

PyPI · npm

65Goodhealth index

ywatanabe1989/scitex-ui

Shared frontend UI components for SciTeX web apps

TypeScript · CSS★ 0↓ 24.4K/moJul 18, 2026

AGPL-3.0Jul 18, 2026 · metrics 2.10.0

npm

62Moderatehealth index

HosungYou/LongTable

Research control plane for AI-assisted scholarship: durable human checkpoints, lawful evidence provenance, and verifiable research packages.

TypeScript · JavaScript★ 5↓ 10.8K/moAug 27, 2026

MITAug 27, 2026 · metrics 2.10.0

PyPI

62Moderatehealth index

ywatanabe1989/scitex-genai

Generative-AI abstraction (LLM, agents, image/audio/video)

Python★ 0↓ 8,008/moJul 19, 2026

AGPL-3.0Jul 19, 2026 · metrics 2.10.0

PyPI

60Moderatehealth index

toshas/torch-fidelity

High-fidelity performance metrics for generative models in PyTorch

Python★ 1,197↓ 846.4K/moAug 13, 2026

Custom licenseAug 13, 2026 · metrics 2.10.0

—

47Weakhealth index

beiko-lab/arete

AMR/VF LGT focused bacterial genomics analysis workflow

Python · Nextflow★ 28Jul 17, 2026

MITJul 17, 2026 · metrics 2.10.0

—

45Weakhealth index

OpenSourceAP/CrossSection

Code to accompany our paper Chen and Zimmermann (2020), "Open source cross-sectional asset pricing"

Python · HTML · Stata★ 1,027Aug 13, 2026

GPL-2.0Aug 13, 2026 · metrics 2.10.0

npm · PyPI

39Weakhealth index

sthamann/tfpt

Topological Fixed-Point Theory: a machine-checked discrete compiler for the Standard Model, α⁻¹, and cosmology from two axioms. Papers, verification suite (Python/Wolfram/Lean), experiments & website.

Python · TeX · TypeScript★ 715Jul 21, 2026

No licenseJul 21, 2026 · metrics 2.10.0

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