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#scanpy

Every repository in the public record carrying this tag — from its GitHub topics or the keywords its package registries publish. Health is measured under the same versioned methodology as the rest of the record.

4 records
Tagged “scanpy”Ranked by health index
PyPI
98Exceptionalhealth index
scverse/anndata
Annotated data.
Python★ 768↓ 1.7M/moAug 27, 2026
BSD-3-ClauseAug 27, 2026 · metrics 2.10.0
PyPI
98Exceptionalhealth index
scverse/scanpy
Single-cell analysis in Python. Scales to >100M cells.
Python★ 2,559↓ 723.9K/moSep 12, 2026
BSD-3-ClauseSep 12, 2026 · metrics 2.10.0
PyPI
87Excellenthealth index
scverse/muon
muon is a multimodal omics Python framework
Python★ 279↓ 16.5K/moSep 14, 2026
BSD-3-ClauseSep 14, 2026 · metrics 2.10.0
PyPI
81Excellenthealth index
cafferychen777/mLLMCelltype
Cell type annotation for single-cell RNA-seq using multi-LLM consensus
Python · R★ 661↓ 285/moSep 15, 2026
MITSep 15, 2026 · metrics 2.10.0