Public recordExcellent
Software health reportschema 0.27.0 · metrics 2.3.1 · 2026-07-24 14:06 UTC
Acellera / moleculekit
MoleculeKit: Your favorite molecule manipulation kit
Acellera/moleculekit holds a health index of 80 out of 100, placing it in the Excellent band. It scores highest on Vitality (89/100) and lowest on Community & Adoption (55/100). It was last updated today. A single contributor accounts for most of its recent work.
80
overall / 100Software health index
Metrics are grouped into weighted categories on one standardized 1–100 scale. Overall starts as their weighted mean, calibrated against the distribution of the public record so bands carry percentile meaning; when public evidence triggers the High-Risk Jurisdiction Policy, the rating is adjusted and receives an At Risk ceiling of 34.
80
Exceptional93-100The record's top tier (≈ top 5%); essentially all checked criteria met
Excellent80-92Strong across the board; minor gaps
Good65-79Healthy; gaps are limited and manageable
Moderate50-64Acceptable with notable gaps; review recommended
Weak35-49Material weaknesses across several areas
At Risk20-34Significant weaknesses; adoption warrants caution
Critical1-19Severe problems (abandoned, single-maintainer, no hygiene)
Score profile
Each axis is a category. The shape matters more than the average — a healthy subject fills the whole shape, while a spike-and-crater profile means strength in one dimension is masking risk in another.
The weighted overall 68 is calibrated to 80 on the published index scale (record calibration 2026-08-02).
Ownership
AcelleraOrganization
67 followers38 public repossince Jun 2014
This repository is backed by an organization — shared, accountable stewardship that can outlive any single maintainer.
Package ecosystems
| Registry | Package | Version | Downloads / mo | Versions | Last publish |
|---|---|---|---|---|---|
| PyPI | moleculekit | 1.15.7 | 14,341 | 254 | 0 days ago |
| PyPI | molkitten | 0.0.7 | 94 | 1 | 1453 days ago |
Metrics by category
Vitality
Is the project alive — is code being written and are releases shipping?
89
Development activity
83Excellent
How it's scored
| 36/36 | Push recency — last push 0 days ago |
| 18.7/36 | Commit cadence — 27/52 weeks with commits |
| 18/18 | Commit volume — 227 commits in the last year |
| 10/10 | OpenSSF Scorecard: Maintained — 30 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10 |
Inputs used
| commits_last_year | 227 |
| human_commit_share | 0.97 |
| days_since_last_push | 0 |
| active_weeks_last_year | 27 |
Release discipline
98Exceptional
How it's scored
| 27/27 | Ships releases — 58 releases published |
| 36/36 | Release recency — latest release 2 days ago |
| 27/27 | Release cadence — a release every ~3 days |
| 8/10 | OpenSSF Scorecard: Signed-Releases — 5 out of the last 5 releases have a total of 5 signed artifacts. |
Inputs used
| releases_count | 58 |
| latest_release_tag | v1.15.6 |
| releases_from_tags | no |
| days_since_latest_release | 2 |
| mean_days_between_releases | 3 |
Community & Adoption
Does the project have users, downloads, attention, and a welcoming setup for contributors?
55
Popularity & adoption
56Moderate
How it's scored
| 38.5/60 | Stars — 237 stars |
| 12.8/25 | Forks — 35 forks |
| 5/15 | Watchers — 9 watchers |
Inputs used
| forks | 35 |
| stars | 237 |
| watchers | 9 |
| growth_state | unverified |
| growth_factor_pct | 100 |
| growth_unverified_reason | no_history |
Community health
44Weak
How it's scored
| 22.5/22.5 | README |
| 16.9/22.5 | License — license file present, not a recognized license |
| 0/18 | CONTRIBUTING guide |
| 0/13.5 | Code of conduct |
| 0/7.2 | Issue template |
| 0/6.3 | PR template |
Inputs used
| has_readme | yes |
| has_license | yes |
| readme_badges | — |
| has_contributing | no |
| has_issue_template | no |
| has_code_of_conduct | no |
| readme_badge_services | — |
| has_pull_request_template | no |
How it's scored
| 55.5/80 | Monthly downloads — 14,435 downloads/month across pypi |
| 0/20 | Registry dependents — not reported by this ecosystem |
Inputs used
| packages | moleculekit, molkitten |
| dependents | — |
| ecosystems | pypi |
| total_downloads | — |
| monthly_downloads | 14,435 |
Excluded from scoring (no data or not applicable): Registry dependents. Remaining weights renormalized.
Sustainability & Governance
Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?
63
Maintainer resilience (bus factor)
28At Risk
How it's scored
| 9/54 | Bus factor — 1 contributor(s) cover half of all commits |
| 0.5/22.5 | Commit distribution — top contributor authored 98% of commits |
| 12.2/13.5 | Contributor breadth — 9 contributors |
| 6/10 | OpenSSF Scorecard: Contributors — project has 2 contributing companies or organizations -- score normalized to 6 |
Inputs used
| bus_factor | 1 |
| contributors_sampled | 9 |
| top_contributor_share | 0.98 |
How it's scored
| 39.1/42 | Issue resolution — 93% of issues closed |
| 23.9/30 | PR acceptance — 39/49 decided PRs merged |
| 0/13 | Newcomer PR acceptance — no first-time contributor's PR decided in 30d |
| 0/15 | OpenSSF Scorecard: Code-Review — Found 0/28 approved changesets -- score normalized to 0 |
Inputs used
| merged_prs | 39 |
| open_issues | 7 |
| closed_issues | 96 |
| prs_merged_7d | — |
| prs_decided_7d | — |
| prs_merged_30d | — |
| prs_decided_30d | — |
| issue_closed_ratio | 0.932 |
| closed_unmerged_prs | 10 |
| first_time_authors_30d | — |
| first_time_prs_merged_30d | — |
| first_time_prs_decided_30d | — |
Excluded from scoring (no data or not applicable): newcomer_pr_acceptance. Remaining weights renormalized.
Ownership & stewardship
67Good
How it's scored
| 30/30 | Ownership backing — organization-owned |
| 0/20 | Verified domain |
| 13.2/25 | Owner reach — 67 followers of Acellera |
| 23.6/25 | Track record — 38 public repos, account ~12 yr old |
Inputs used
| followers | 67 |
| owner_type | Organization |
| is_verified | — |
| owner_login | Acellera |
| public_repos | 38 |
| account_age_days | 4,434 |
Package maintenance
100Exceptional
How it's scored
| 25/25 | Published & resolvable — 2 package(s) on pypi |
| 35/35 | Publish recency — latest publish 0 days ago |
| 20/20 | Version history — 254 published versions |
| 20/20 | Not deprecated — active, not deprecated or yanked |
Inputs used
| packages | moleculekit, molkitten |
| ecosystems | pypi |
| any_deprecated | no |
| min_days_since_publish | 0 |
Engineering Quality
Are baseline engineering and documentation practices in place?
63
Engineering practices
48Weak
How it's scored
| 24/24 | CI workflows — 6 workflow(s) |
| 24/24 | Tests present |
| 0/16 | Linter config |
| 0/9.6 | Pre-commit hooks |
| 0/6.4 | .editorconfig |
| 0/20 | OpenSSF Scorecard: CI-Tests — 0 out of 2 merged PRs checked by a CI test -- score normalized to 0 |
Inputs used
| has_ci | yes |
| has_tests | yes |
| has_editorconfig | no |
| has_linter_config | no |
| has_precommit_config | no |
Documentation
85Excellent
How it's scored
| 30/30 | README |
| 25/25 | Documentation directory |
| 0/15 | Documentation / homepage site |
| 10/10 | Repository description |
| 10/10 | Topics — 6 topics |
| 10/10 | Wiki |
Inputs used
| topics | molecule, machine-learning, proteins, drug-discovery, molecular-modeling, molecular-simulation |
| has_wiki | yes |
| homepage | — |
| has_readme | yes |
| has_docs_dir | yes |
| has_description | yes |
Security
Are visible security and supply-chain practices strong, without unresolved high-risk jurisdiction exposure?
67
Security posture
59Moderate
How it's scored
| 7.5/7.5 | Binary-Artifacts — no binaries found in the repo |
| 0/7.5 | Branch-Protection — no data |
| 0/2.5 | CI-Tests — 0 out of 2 merged PRs checked by a CI test -- score normalized to 0 |
| 0/2.5 | CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected |
| 0/7.5 | Code-Review — Found 0/28 approved changesets -- score normalized to 0 |
| 1.5/2.5 | Contributors — project has 2 contributing companies or organizations -- score normalized to 6 |
| 10/10 | Dangerous-Workflow — no dangerous workflow patterns detected |
| 7.5/7.5 | Dependency-Update-Tool — update tool detected |
| 0/5 | Fuzzing — project is not fuzzed |
| 2.2/2.5 | License — license file detected |
| 7.5/7.5 | Maintained — 30 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10 |
| 0/5 | Packaging — no data |
| 0/5 | Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
| 5/5 | SAST — SAST tool is run on all commits |
| 0/5 | Security-Policy — security policy file not detected |
| 6/7.5 | Signed-Releases — 5 out of the last 5 releases have a total of 5 signed artifacts. |
| 0/7.5 | Token-Permissions — detected GitHub workflow tokens with excessive permissions |
| 7.5/7.5 | Vulnerabilities — 0 existing vulnerabilities detected |
Inputs used
| source | openssf_scorecard |
| checks_evaluated | 16 |
| scorecard_version | v5.5.0 |
| checks_inconclusive | 2 |
| scorecard_aggregate | 5.9 |
Excluded from scoring (no data or not applicable): branch_protection, packaging. Remaining weights renormalized.
Dependency advisories
100Exceptional
How it's scored
| 35/35 | Direct dependencies free of known advisories — no direct dependency carries a known advisory |
| 0/25 | Indirect dependencies free of known advisories — transitive set not separable from development and test dependencies in this scope |
| 0/40 | No advisories left outstanding — no advisory carries a publication date |
Inputs used
| source | osv |
| advisories | 0 |
| affected_packages | 0 |
| assessed_packages | 296 |
| unassessed_packages | 16 |
| affected_by_severity | none |
| direct_affected_packages | 0 |
Excluded from scoring (no data or not applicable): Indirect dependencies free of known advisories, No advisories left outstanding. Remaining weights renormalized. Matched 296 resolved dependencies against OSV. 16 could not be assessed — no resolved version, an unsupported ecosystem, or beyond the reported package list. This repository publishes no package the index resolves, so the repository dependency graph was assessed instead. That graph mixes development and test pins with shipped dependencies, so only the declared runtime dependencies are scored; transitive findings are reported as context and excluded from the score. Reachability is not analyzed.
AI Readiness
How well is the repo equipped to be developed and maintained with AI coding agents? Carries a deliberately small weight (4%): agent tooling is a real maintenance signal, but a repository with none can still reach 100/100.
64
Agent context & guidance
60Moderate
How it's scored
| 45/45 | Agent instructions — AGENTS.md |
| 15/15 | Machine-readable docs (llms.txt) — llms.txt present |
| 0.5/40 | Legible commit history — 1 of 97 human commits state their intent (structured subject or explanatory body) |
Inputs used
| has_llms_txt | yes |
| legible_history_share | 0.01 |
| agent_instruction_files | AGENTS.md |
| agent_instruction_max_bytes | 9,201 |
How it's scored
| 18/18 | One-command bootstrap — Makefile, doc/Makefile |
| 22/22 | Automated tests |
| 0/11 | Lint / format config |
| 11/11 | Static type checking — viewer-frontend/tsconfig.json |
| 10/10 | Reproducible environment — Dockerfile, lockfile |
| 0/10 | Demonstrated agent practice — no agent-authored commits among the last 100 |
| 8/8 | Automated maintenance — 3 of the last 100 commits are automated dependency updates |
| 0/10 | OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
Inputs used
| has_nix | no |
| has_tests | yes |
| lockfiles | package-lock.json |
| has_dockerfile | yes |
| typed_language | no |
| bootstrap_files | Makefile, doc/Makefile |
| has_devcontainer | no |
| has_linter_config | no |
| typecheck_configs | viewer-frontend/tsconfig.json |
| agent_commit_share | 0 |
| toolchain_manifests | — |
| dependency_bot_commit_share | 0.03 |
Code legibility for models
80Excellent
How it's scored
| 27/45 | Type-checkable code — Python with type-check config (viewer-frontend/tsconfig.json) |
| 52.5/55 | Manageable file sizes — 9/195 source files over 60KB |
Inputs used
| primary_language | Python |
| largest_source_bytes | 3,419,873 |
| source_files_sampled | 195 |
| oversized_source_files | 9 |
How it's scored
| 0/40 | API schema (OpenAPI/GraphQL/proto) |
| 0/20 | MCP server |
| 40/40 | Runnable examples — examples, notebooks |
Inputs used
| example_dirs | examples, notebooks |
| has_mcp_signal | no |
| api_schema_files | — |
Key facts
237GitHub stars
9contributors
227commits, last 12 months
0days since last push
58releases
1bus factor
7open issues
npm, PyPIpackage ecosystems
Data collection warnings
- Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token
- deps.dev does not index pypi:moleculekit@1.15.7; advisories assessed against the repository dependency graph instead
More detail
Star and fork history 0 ★ / 35 ⇿
0Stars
35Forks
10Releases
When each star and fork was added, collected from GitHub and bucketed by day. Cumulative growth sits directly above the daily additions it is made of, so the two read against each other: steady organic accretion looks nothing like an abrupt, short-lived burst. Where that difference is measurable, it is reported as growth authenticity.
Major 0Minor 1Patch 9
Each point covers 6 days.
OpenSSF Scorecard 5.9 / 10
5.9aggregate
Independent, tool-agnostic security assessment from the open-source OpenSSF Scorecard. Each check rewards a security practice, not a specific vendor's tool. Checks Scorecard could not determine are marked n/a and excluded from the security score (never counted as zero).
| 10 | Binary-Artifacts | no binaries found in the repo |
| n/a | Branch-Protection | internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md |
| 0 | CI-Tests | 0 out of 2 merged PRs checked by a CI test -- score normalized to 0 |
| 0 | CII-Best-Practices | no effort to earn an OpenSSF best practices badge detected |
| 0 | Code-Review | Found 0/28 approved changesets -- score normalized to 0 |
| 6 | Contributors | project has 2 contributing companies or organizations -- score normalized to 6 |
| 10 | Dangerous-Workflow | no dangerous workflow patterns detected |
| 10 | Dependency-Update-Tool | update tool detected |
| 0 | Fuzzing | project is not fuzzed |
| 9 | License | license file detected |
| 10 | Maintained | 30 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10 |
| n/a | Packaging | packaging workflow not detected |
| 0 | Pinned-Dependencies | dependency not pinned by hash detected -- score normalized to 0 |
| 10 | SAST | SAST tool is run on all commits |
| 0 | Security-Policy | security policy file not detected |
| 8 | Signed-Releases | 5 out of the last 5 releases have a total of 5 signed artifacts. |
| 0 | Token-Permissions | detected GitHub workflow tokens with excessive permissions |
| 10 | Vulnerabilities | 0 existing vulnerabilities detected |
Direct dependencies 15
| Registry | Package | Version constraint | Manifest |
|---|---|---|---|
| PyPI | numpy | >=1.23.5 | pyproject.toml |
| PyPI | pandas | >=1.1.2 | pyproject.toml |
| PyPI | networkx | — | pyproject.toml |
| PyPI | tqdm | — | pyproject.toml |
| PyPI | msgpack | — | pyproject.toml |
| PyPI | requests | — | pyproject.toml |
| PyPI | matplotlib | — | pyproject.toml |
| PyPI | rdkit | >=2020.09.5 | pyproject.toml |
| PyPI | mdtraj | — | pyproject.toml |
| PyPI | acellera-propka | — | pyproject.toml |
| PyPI | acellera-pdb2pqr | >=3.7.1.post1 | pyproject.toml |
| PyPI | biopython | — | pyproject.toml |
| npm | molstar | ^5.7.0 | viewer-frontend/package.json |
| npm | react | ^19.2.4 | viewer-frontend/package.json |
| npm | react-dom | ^19.2.4 | viewer-frontend/package.json |
All dependencies 312
Full resolved dependency set from the GitHub dependency graph: 8 direct and 304 indirect (transitive) packages. The transitive closure is complete when the repository commits a lockfile.
| Registry | Package | Version | Relation |
|---|---|---|---|
| npm | molstar | 5.9.0 | direct |
| npm | react | 19.2.6 | direct |
| npm | react-dom | 19.2.6 | direct |
| PyPI | acellera-pdb2pqr | — | direct |
| PyPI | networkx | — | direct |
| PyPI | numpy | — | direct |
| PyPI | pandas | — | direct |
| PyPI | rdkit | — | direct |
| npm | @emnapi/core | 1.10.0 | indirect |
| npm | @emnapi/runtime | 1.10.0 | indirect |
| npm | @emnapi/wasi-threads | 1.2.1 | indirect |
| npm | @jridgewell/sourcemap-codec | 1.5.5 | indirect |
| npm | @napi-rs/wasm-runtime | 1.1.5 | indirect |
| npm | @oxc-project/types | 0.133.0 | indirect |
| npm | @rolldown/binding-android-arm64 | 1.0.3 | indirect |
| npm | @rolldown/binding-darwin-arm64 | 1.0.3 | indirect |
| npm | @rolldown/binding-darwin-x64 | 1.0.3 | indirect |
| npm | @rolldown/binding-freebsd-x64 | 1.0.3 | indirect |
| npm | @rolldown/binding-linux-arm-gnueabihf | 1.0.3 | indirect |
| npm | @rolldown/binding-linux-arm64-gnu | 1.0.3 | indirect |
| npm | @rolldown/binding-linux-arm64-musl | 1.0.3 | indirect |
| npm | @rolldown/binding-linux-ppc64-gnu | 1.0.3 | indirect |
| npm | @rolldown/binding-linux-s390x-gnu | 1.0.3 | indirect |
| npm | @rolldown/binding-linux-x64-gnu | 1.0.3 | indirect |
| npm | @rolldown/binding-linux-x64-musl | 1.0.3 | indirect |
| npm | @rolldown/binding-openharmony-arm64 | 1.0.3 | indirect |
| npm | @rolldown/binding-wasm32-wasi | 1.0.3 | indirect |
| npm | @rolldown/binding-win32-arm64-msvc | 1.0.3 | indirect |
| npm | @rolldown/binding-win32-x64-msvc | 1.0.3 | indirect |
| npm | @rolldown/pluginutils | 1.0.1 | indirect |
| npm | @rollup/rollup-android-arm-eabi | 4.60.4 | indirect |
| npm | @rollup/rollup-android-arm64 | 4.60.4 | indirect |
| npm | @rollup/rollup-darwin-arm64 | 4.60.4 | indirect |
| npm | @rollup/rollup-darwin-x64 | 4.60.4 | indirect |
| npm | @rollup/rollup-freebsd-arm64 | 4.60.4 | indirect |
| npm | @rollup/rollup-freebsd-x64 | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-arm-gnueabihf | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-arm-musleabihf | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-arm64-gnu | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-arm64-musl | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-loong64-gnu | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-loong64-musl | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-ppc64-gnu | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-ppc64-musl | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-riscv64-gnu | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-riscv64-musl | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-s390x-gnu | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-x64-gnu | 4.60.4 | indirect |
| npm | @rollup/rollup-linux-x64-musl | 4.60.4 | indirect |
| npm | @rollup/rollup-openbsd-x64 | 4.60.4 | indirect |
| npm | @rollup/rollup-openharmony-arm64 | 4.60.4 | indirect |
| npm | @rollup/rollup-win32-arm64-msvc | 4.60.4 | indirect |
| npm | @rollup/rollup-win32-ia32-msvc | 4.60.4 | indirect |
| npm | @rollup/rollup-win32-x64-gnu | 4.60.4 | indirect |
| npm | @rollup/rollup-win32-x64-msvc | 4.60.4 | indirect |
| npm | @scarf/scarf | 1.4.0 | indirect |
| npm | @tybys/wasm-util | 0.10.2 | indirect |
| npm | @types/argparse | 2.0.17 | indirect |
| npm | @types/benchmark | 2.1.5 | indirect |
| npm | @types/body-parser | 1.19.6 | indirect |
| npm | @types/compression | 1.8.1 | indirect |
| npm | @types/connect | 3.4.38 | indirect |
| npm | @types/debug | 4.1.13 | indirect |
| npm | @types/estree | 1.0.8 | indirect |
| npm | @types/estree | 1.0.9 | indirect |
| npm | @types/estree-jsx | 1.0.5 | indirect |
| npm | @types/express | 5.0.6 | indirect |
| npm | @types/express-serve-static-core | 5.1.1 | indirect |
| npm | @types/hast | 3.0.4 | indirect |
| npm | @types/http-errors | 2.0.5 | indirect |
| npm | @types/mdast | 4.0.4 | indirect |
| npm | @types/ms | 2.1.0 | indirect |
| npm | @types/node | 22.19.19 | indirect |
| npm | @types/node | 24.12.4 | indirect |
| npm | @types/qs | 6.15.1 | indirect |
| npm | @types/range-parser | 1.2.7 | indirect |
| npm | @types/react | 19.2.15 | indirect |
| npm | @types/react-dom | 19.2.3 | indirect |
| npm | @types/send | 1.2.1 | indirect |
| npm | @types/serve-static | 2.2.0 | indirect |
| npm | @types/swagger-ui-dist | 3.30.6 | indirect |
| npm | @types/unist | 2.0.11 | indirect |
| npm | @types/unist | 3.0.3 | indirect |
| npm | @ungap/structured-clone | 1.3.1 | indirect |
| npm | @vitejs/plugin-react | 6.0.2 | indirect |
| npm | accepts | 2.0.0 | indirect |
| npm | argparse | 2.0.1 | indirect |
| npm | array-find-index | 1.0.2 | indirect |
| npm | bail | 2.0.2 | indirect |
| npm | body-parser | 2.3.0 | indirect |
| npm | bytes | 3.1.2 | indirect |
| npm | call-bind-apply-helpers | 1.0.2 | indirect |
| npm | call-bound | 1.0.4 | indirect |
| npm | ccount | 2.0.1 | indirect |
| npm | character-entities | 2.0.2 | indirect |
| npm | character-entities-html4 | 2.1.0 | indirect |
| npm | character-entities-legacy | 3.0.0 | indirect |
| npm | character-reference-invalid | 2.0.1 | indirect |
| npm | comma-separated-tokens | 2.0.3 | indirect |
| npm | commenting | 1.1.0 | indirect |
| npm | compressible | 2.0.18 | indirect |
| npm | compression | 1.8.1 | indirect |
| npm | content-disposition | 1.1.0 | indirect |
| npm | content-type | 1.0.5 | indirect |
| npm | content-type | 2.0.0 | indirect |
| npm | cookie | 0.7.2 | indirect |
| npm | cookie-signature | 1.2.2 | indirect |
| npm | cors | 2.8.6 | indirect |
| npm | csstype | 3.2.3 | indirect |
| npm | debug | 2.6.9 | indirect |
| npm | debug | 4.4.3 | indirect |
| npm | decode-named-character-reference | 1.3.0 | indirect |
| npm | depd | 2.0.0 | indirect |
| npm | dequal | 2.0.3 | indirect |
| npm | detect-libc | 2.1.2 | indirect |
| npm | devlop | 1.1.0 | indirect |
| npm | dunder-proto | 1.0.1 | indirect |
| npm | ee-first | 1.1.1 | indirect |
| npm | encodeurl | 2.0.0 | indirect |
| npm | es-define-property | 1.0.1 | indirect |
| npm | es-errors | 1.3.0 | indirect |
| npm | es-object-atoms | 1.1.2 | indirect |
| npm | escape-html | 1.0.3 | indirect |
| npm | escape-string-regexp | 5.0.0 | indirect |
| npm | estree-util-is-identifier-name | 3.0.0 | indirect |
| npm | etag | 1.8.1 | indirect |
| npm | express | 5.2.1 | indirect |
| npm | extend | 3.0.2 | indirect |
| npm | fdir | 6.5.0 | indirect |
| npm | finalhandler | 2.1.1 | indirect |
| npm | forwarded | 0.2.0 | indirect |
| npm | fp-ts | 2.16.11 | indirect |
| npm | fresh | 2.0.0 | indirect |
| npm | fsevents | 2.3.3 | indirect |
| npm | function-bind | 1.1.2 | indirect |
| npm | get-intrinsic | 1.3.0 | indirect |
| npm | get-proto | 1.0.1 | indirect |
| npm | gopd | 1.2.0 | indirect |
| npm | h264-mp4-encoder | 1.0.12 | indirect |
| npm | has-symbols | 1.1.0 | indirect |
| npm | hasown | 2.0.3 | indirect |
| npm | hast-util-to-jsx-runtime | 2.3.6 | indirect |
| npm | hast-util-whitespace | 3.0.0 | indirect |
| npm | html-url-attributes | 3.0.1 | indirect |
| npm | http-errors | 2.0.1 | indirect |
| npm | iconv-lite | 0.7.2 | indirect |
| npm | immutable | 5.1.9 | indirect |
| npm | inherits | 2.0.4 | indirect |
| npm | inline-style-parser | 0.2.7 | indirect |
| npm | io-ts | 2.2.22 | indirect |
| npm | ipaddr.js | 1.9.1 | indirect |
| npm | is-alphabetical | 2.0.1 | indirect |
| npm | is-alphanumerical | 2.0.1 | indirect |
| npm | is-decimal | 2.0.1 | indirect |
| npm | is-hexadecimal | 2.0.1 | indirect |
| npm | is-plain-obj | 4.1.0 | indirect |
| npm | is-promise | 4.0.0 | indirect |
| npm | lightningcss | 1.32.0 | indirect |
| npm | lightningcss-android-arm64 | 1.32.0 | indirect |
| npm | lightningcss-darwin-arm64 | 1.32.0 | indirect |
| npm | lightningcss-darwin-x64 | 1.32.0 | indirect |
| npm | lightningcss-freebsd-x64 | 1.32.0 | indirect |
| npm | lightningcss-linux-arm-gnueabihf | 1.32.0 | indirect |
| npm | lightningcss-linux-arm64-gnu | 1.32.0 | indirect |
| npm | lightningcss-linux-arm64-musl | 1.32.0 | indirect |
| npm | lightningcss-linux-x64-gnu | 1.32.0 | indirect |
| npm | lightningcss-linux-x64-musl | 1.32.0 | indirect |
| npm | lightningcss-win32-arm64-msvc | 1.32.0 | indirect |
| npm | lightningcss-win32-x64-msvc | 1.32.0 | indirect |
| npm | lodash | 4.18.1 | indirect |
| npm | longest-streak | 3.1.0 | indirect |
| npm | magic-string | 0.30.21 | indirect |
| npm | markdown-table | 3.0.4 | indirect |
| npm | math-intrinsics | 1.1.0 | indirect |
| npm | mdast-util-find-and-replace | 3.0.2 | indirect |
| npm | mdast-util-from-markdown | 2.0.3 | indirect |
| npm | mdast-util-gfm | 3.1.0 | indirect |
| npm | mdast-util-gfm-autolink-literal | 2.0.1 | indirect |
| npm | mdast-util-gfm-footnote | 2.1.0 | indirect |
| npm | mdast-util-gfm-strikethrough | 2.0.0 | indirect |
| npm | mdast-util-gfm-table | 2.0.0 | indirect |
| npm | mdast-util-gfm-task-list-item | 2.0.0 | indirect |
| npm | mdast-util-mdx-expression | 2.0.1 | indirect |
| npm | mdast-util-mdx-jsx | 3.2.0 | indirect |
| npm | mdast-util-mdxjs-esm | 2.0.1 | indirect |
| npm | mdast-util-phrasing | 4.1.0 | indirect |
| npm | mdast-util-to-hast | 13.2.1 | indirect |
| npm | mdast-util-to-markdown | 2.1.2 | indirect |
| npm | mdast-util-to-string | 4.0.0 | indirect |
| npm | media-typer | 1.1.0 | indirect |
| npm | merge-descriptors | 2.0.0 | indirect |
| npm | micromark | 4.0.2 | indirect |
| npm | micromark-core-commonmark | 2.0.3 | indirect |
| npm | micromark-extension-gfm | 3.0.0 | indirect |
| npm | micromark-extension-gfm-autolink-literal | 2.1.0 | indirect |
| npm | micromark-extension-gfm-footnote | 2.1.0 | indirect |
| npm | micromark-extension-gfm-strikethrough | 2.1.0 | indirect |
| npm | micromark-extension-gfm-table | 2.1.1 | indirect |
| npm | micromark-extension-gfm-tagfilter | 2.0.0 | indirect |
| npm | micromark-extension-gfm-task-list-item | 2.1.0 | indirect |
| npm | micromark-factory-destination | 2.0.1 | indirect |
| npm | micromark-factory-label | 2.0.1 | indirect |
| npm | micromark-factory-space | 2.0.1 | indirect |
| npm | micromark-factory-title | 2.0.1 | indirect |
| npm | micromark-factory-whitespace | 2.0.1 | indirect |
| npm | micromark-util-character | 2.1.1 | indirect |
| npm | micromark-util-chunked | 2.0.1 | indirect |
| npm | micromark-util-classify-character | 2.0.1 | indirect |
| npm | micromark-util-combine-extensions | 2.0.1 | indirect |
| npm | micromark-util-decode-numeric-character-reference | 2.0.2 | indirect |
| npm | micromark-util-decode-string | 2.0.1 | indirect |
| npm | micromark-util-encode | 2.0.1 | indirect |
| npm | micromark-util-html-tag-name | 2.0.1 | indirect |
| npm | micromark-util-normalize-identifier | 2.0.1 | indirect |
| npm | micromark-util-resolve-all | 2.0.1 | indirect |
| npm | micromark-util-sanitize-uri | 2.0.1 | indirect |
| npm | micromark-util-subtokenize | 2.1.0 | indirect |
| npm | micromark-util-symbol | 2.0.1 | indirect |
| npm | micromark-util-types | 2.0.2 | indirect |
| npm | mime-db | 1.54.0 | indirect |
| npm | mime-types | 3.0.2 | indirect |
| npm | moment | 2.30.1 | indirect |
| npm | ms | 2.0.0 | indirect |
| npm | ms | 2.1.3 | indirect |
| npm | mutative | 1.3.0 | indirect |
| npm | nanoid | 3.3.12 | indirect |
| npm | negotiator | 0.6.4 | indirect |
| npm | negotiator | 1.0.0 | indirect |
| npm | object-assign | 4.1.1 | indirect |
| npm | object-inspect | 1.13.4 | indirect |
| npm | on-finished | 2.4.1 | indirect |
| npm | on-headers | 1.1.0 | indirect |
| npm | once | 1.4.0 | indirect |
| npm | package-name-regex | 2.0.6 | indirect |
| npm | parse-entities | 4.0.2 | indirect |
| npm | parseurl | 1.3.3 | indirect |
| npm | path-to-regexp | 8.4.2 | indirect |
| npm | picocolors | 1.1.1 | indirect |
| npm | picomatch | 4.0.4 | indirect |
| npm | postcss | 8.5.15 | indirect |
| npm | property-information | 7.1.0 | indirect |
| npm | proxy-addr | 2.0.7 | indirect |
| npm | qs | 6.15.2 | indirect |
| npm | range-parser | 1.2.1 | indirect |
| npm | raw-body | 3.0.2 | indirect |
| npm | react-markdown | 10.1.0 | indirect |
| npm | remark-gfm | 4.0.1 | indirect |
| npm | remark-parse | 11.0.0 | indirect |
| npm | remark-rehype | 11.1.2 | indirect |
| npm | remark-stringify | 11.0.0 | indirect |
| npm | rolldown | 1.0.3 | indirect |
| npm | rollup | 4.60.4 | indirect |
| npm | rollup-plugin-license | 3.7.1 | indirect |
| npm | router | 2.2.0 | indirect |
| npm | rxjs | 7.8.2 | indirect |
| npm | safe-buffer | 5.2.1 | indirect |
| npm | safer-buffer | 2.1.2 | indirect |
| npm | scheduler | 0.27.0 | indirect |
| npm | send | 1.2.1 | indirect |
| npm | serve-static | 2.2.1 | indirect |
| npm | setprototypeof | 1.2.0 | indirect |
| npm | side-channel | 1.1.0 | indirect |
| npm | side-channel-list | 1.0.1 | indirect |
| npm | side-channel-map | 1.0.1 | indirect |
| npm | side-channel-weakmap | 1.0.2 | indirect |
| npm | source-map-js | 1.2.1 | indirect |
| npm | space-separated-tokens | 2.0.2 | indirect |
| npm | spdx-compare | 1.0.0 | indirect |
| npm | spdx-exceptions | 2.5.0 | indirect |
| npm | spdx-expression-parse | 3.0.1 | indirect |
| npm | spdx-expression-validate | 2.0.0 | indirect |
| npm | spdx-license-ids | 3.0.23 | indirect |
| npm | spdx-ranges | 2.1.1 | indirect |
| npm | spdx-satisfies | 5.0.1 | indirect |
| npm | statuses | 2.0.2 | indirect |
| npm | stringify-entities | 4.0.4 | indirect |
| npm | style-to-js | 1.1.21 | indirect |
| npm | style-to-object | 1.0.14 | indirect |
| npm | swagger-ui-dist | 5.32.6 | indirect |
| npm | tinyglobby | 0.2.17 | indirect |
| npm | toidentifier | 1.0.1 | indirect |
| npm | trim-lines | 3.0.1 | indirect |
| npm | trough | 2.2.0 | indirect |
| npm | tslib | 2.8.1 | indirect |
| npm | type-is | 2.1.0 | indirect |
| npm | typescript | 5.9.3 | indirect |
| npm | undici-types | 6.21.0 | indirect |
| npm | undici-types | 7.16.0 | indirect |
| npm | unified | 11.0.5 | indirect |
| npm | unist-util-is | 6.0.1 | indirect |
| npm | unist-util-position | 5.0.0 | indirect |
| npm | unist-util-stringify-position | 4.0.0 | indirect |
| npm | unist-util-visit | 5.1.0 | indirect |
| npm | unist-util-visit-parents | 6.0.2 | indirect |
| npm | unpipe | 1.0.0 | indirect |
| npm | vary | 1.1.2 | indirect |
| npm | vfile | 6.0.3 | indirect |
| npm | vfile-message | 4.0.3 | indirect |
| npm | vite | 8.0.16 | indirect |
| npm | wrappy | 1.0.2 | indirect |
| npm | zwitch | 2.0.4 | indirect |
| PyPI | cython | — | indirect |
| PyPI | ipython | — | indirect |
| PyPI | nvidia-cuda-cupti-cu12 | — | indirect |
| PyPI | nvidia-cuda-nvcc-cu12 | — | indirect |
| PyPI | nvidia-cuda-nvrtc-cu12 | — | indirect |
| PyPI | nvidia-cuda-runtime-cu12 | — | indirect |
| PyPI | nvidia-nvjitlink-cu12 | — | indirect |
| PyPI | openmm | — | indirect |
| PyPI | pytest | — | indirect |
| PyPI | scipy | — | indirect |
| PyPI | setuptools-scm | — | indirect |
Dependency advisories 0
This repository publishes no package the index resolves, so its own dependency graph was assessed — 296 packages, which also include development and test pins that never ship: 0 carry known advisories, of which 0 are direct. 16 could not be assessed — no resolved version, an unsupported ecosystem, or beyond the reported package list.
No known advisories affect the assessed dependencies.
An advisory means the version recorded in the dependency graph falls inside an advisory’s affected range. Reachability is not analysed, and the graph includes development and test pins — a finding may concern tooling rather than shipped software.
Raw JSON report machine-readable
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"status": "missed",
"details": [],
"max_points": 16
},
{
"key": "pre_commit_hooks",
"name": "Pre-commit hooks",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 9.6
},
{
"key": "editorconfig",
"name": ".editorconfig",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 6.4
},
{
"key": "openssf_scorecard_ci_tests",
"name": "OpenSSF Scorecard: CI-Tests",
"detail": "0 out of 2 merged PRs checked by a CI test -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 20
}
]
},
{
"key": "documentation",
"band": "excellent",
"name": "Documentation",
"note": null,
"notes": [],
"value": 85,
"inputs": {
"topics": [
"molecule",
"machine-learning",
"proteins",
"drug-discovery",
"molecular-modeling",
"molecular-simulation"
],
"has_wiki": true,
"homepage": null,
"has_readme": true,
"has_docs_dir": true,
"has_description": true
},
"components": [
{
"key": "readme",
"name": "README",
"detail": null,
"points": 30,
"status": "met",
"details": [],
"max_points": 30
},
{
"key": "documentation_directory",
"name": "Documentation directory",
"detail": null,
"points": 25,
"status": "met",
"details": [],
"max_points": 25
},
{
"key": "documentation_homepage_site",
"name": "Documentation / homepage site",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 15
},
{
"key": "repository_description",
"name": "Repository description",
"detail": null,
"points": 10,
"status": "met",
"details": [],
"max_points": 10
},
{
"key": "topics",
"name": "Topics",
"detail": "6 topics",
"points": 10,
"status": "met",
"details": [
{
"code": "topics_count",
"params": {
"count": 6
}
}
],
"max_points": 10
},
{
"key": "wiki",
"name": "Wiki",
"detail": null,
"points": 10,
"status": "met",
"details": [],
"max_points": 10
}
]
}
],
"description": "Are baseline engineering and documentation practices in place?"
},
{
"key": "security",
"band": "good",
"name": "Security",
"value": 67,
"weight": 0.16,
"metrics": [
{
"key": "security_posture",
"band": "moderate",
"name": "Security posture",
"note": "Excluded from scoring (no data or not applicable): Branch-Protection, Packaging. Remaining weights renormalized.",
"notes": [
{
"code": "excluded_no_data",
"params": {
"components": [
"branch_protection",
"packaging"
]
}
},
{
"code": "weights_renormalized",
"params": {}
}
],
"value": 59,
"inputs": {
"source": "openssf_scorecard",
"checks_evaluated": 16,
"scorecard_version": "v5.5.0",
"checks_inconclusive": 2,
"scorecard_aggregate": 5.9
},
"components": [
{
"key": "binary_artifacts",
"name": "Binary-Artifacts",
"detail": "no binaries found in the repo",
"points": 7.5,
"status": "met",
"details": [],
"max_points": 7.5
},
{
"key": "branch_protection",
"name": "Branch-Protection",
"detail": "internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md",
"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
"params": {}
}
],
"max_points": 7.5
},
{
"key": "ci_tests",
"name": "CI-Tests",
"detail": "0 out of 2 merged PRs checked by a CI test -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 2.5
},
{
"key": "cii_best_practices",
"name": "CII-Best-Practices",
"detail": "no effort to earn an OpenSSF best practices badge detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 2.5
},
{
"key": "code_review",
"name": "Code-Review",
"detail": "Found 0/28 approved changesets -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
},
{
"key": "contributors",
"name": "Contributors",
"detail": "project has 2 contributing companies or organizations -- score normalized to 6",
"points": 1.5,
"status": "partial",
"details": [],
"max_points": 2.5
},
{
"key": "dangerous_workflow",
"name": "Dangerous-Workflow",
"detail": "no dangerous workflow patterns detected",
"points": 10,
"status": "met",
"details": [],
"max_points": 10
},
{
"key": "dependency_update_tool",
"name": "Dependency-Update-Tool",
"detail": "update tool detected",
"points": 7.5,
"status": "met",
"details": [],
"max_points": 7.5
},
{
"key": "fuzzing",
"name": "Fuzzing",
"detail": "project is not fuzzed",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "license",
"name": "License",
"detail": "license file detected",
"points": 2.2,
"status": "partial",
"details": [],
"max_points": 2.5
},
{
"key": "maintained",
"name": "Maintained",
"detail": "30 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10",
"points": 7.5,
"status": "met",
"details": [],
"max_points": 7.5
},
{
"key": "packaging",
"name": "Packaging",
"detail": "packaging workflow not detected",
"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
"params": {}
}
],
"max_points": 5
},
{
"key": "pinned_dependencies",
"name": "Pinned-Dependencies",
"detail": "dependency not pinned by hash detected -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "sast",
"name": "SAST",
"detail": "SAST tool is run on all commits",
"points": 5,
"status": "met",
"details": [],
"max_points": 5
},
{
"key": "security_policy",
"name": "Security-Policy",
"detail": "security policy file not detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "signed_releases",
"name": "Signed-Releases",
"detail": "5 out of the last 5 releases have a total of 5 signed artifacts.",
"points": 6,
"status": "partial",
"details": [],
"max_points": 7.5
},
{
"key": "token_permissions",
"name": "Token-Permissions",
"detail": "detected GitHub workflow tokens with excessive permissions",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
},
{
"key": "vulnerabilities",
"name": "Vulnerabilities",
"detail": "0 existing vulnerabilities detected",
"points": 7.5,
"status": "met",
"details": [],
"max_points": 7.5
}
]
},
{
"key": "dependency_advisories",
"band": "exceptional",
"name": "Dependency advisories",
"note": "Excluded from scoring (no data or not applicable): Indirect dependencies free of known advisories, No advisories left outstanding. Remaining weights renormalized. Matched 296 resolved dependencies against OSV; 16 could not be assessed (no resolved version, an unsupported ecosystem, or beyond the reported package list). This repository publishes no package the index resolves, so the repository dependency graph was assessed instead. That graph mixes development and test pins with shipped dependencies, so only the declared runtime dependencies are scored; transitive findings are reported as context and excluded from the score. Reachability is not analyzed.",
"notes": [
{
"code": "excluded_no_data",
"params": {
"components": [
"indirect_dependencies_free_of_known_advisories",
"no_advisories_left_outstanding"
]
}
},
{
"code": "weights_renormalized",
"params": {}
},
{
"code": "advisories_scope_repository",
"params": {
"assessed": 296
}
},
{
"code": "advisories_unassessed",
"params": {
"count": 16
}
},
{
"code": "advisories_repo_graph_caveat",
"params": {}
},
{
"code": "advisories_reachability",
"params": {}
}
],
"value": 100,
"inputs": {
"source": "osv",
"advisories": 0,
"affected_packages": 0,
"assessed_packages": 296,
"unassessed_packages": 16,
"affected_by_severity": "none",
"direct_affected_packages": 0
},
"components": [
{
"key": "direct_dependencies_free_of_known_advisories",
"name": "Direct dependencies free of known advisories",
"detail": "no direct dependency carries a known advisory",
"points": 35,
"status": "met",
"details": [
{
"code": "no_direct_advisories",
"params": {}
}
],
"max_points": 35
},
{
"key": "indirect_dependencies_free_of_known_advisories",
"name": "Indirect dependencies free of known advisories",
"detail": "transitive set not separable from development and test dependencies in this scope",
"points": 0,
"status": "excluded",
"details": [
{
"code": "advisories_scope_not_separable",
"params": {}
}
],
"max_points": 25
},
{
"key": "no_advisories_left_outstanding",
"name": "No advisories left outstanding",
"detail": "no advisory carries a publication date",
"points": 0,
"status": "excluded",
"details": [
{
"code": "advisories_no_publication_date",
"params": {}
}
],
"max_points": 40
}
]
},
{
"key": "malicious_dependencies",
"band": "exceptional",
"name": "Malicious dependencies",
"note": null,
"notes": [],
"value": 100,
"inputs": {
"source": "osv",
"meaning": "reported as a malicious package by the OpenSSF corpus; the remedy is removal or moving off the compromised name, never an upgrade of the same artifact. Versions the registry has since pulled are listed but not scored",
"packages": [],
"red_flag": false,
"assessed_packages": 296,
"malicious_packages": 0,
"direct_malicious_packages": 0,
"withdrawn_malicious_packages": 0,
"installable_malicious_packages": 0
},
"components": [
{
"key": "no_dependency_reported_as_a_malicious_package",
"name": "No dependency reported as a malicious package",
"detail": "no dependency is reported as a malicious package",
"points": 100,
"status": "met",
"details": [
{
"code": "no_malicious_dependencies",
"params": {}
}
],
"max_points": 100
}
]
},
{
"key": "high_risk_jurisdiction_exposure",
"band": "exceptional",
"name": "High-Risk Jurisdiction Exposure",
"note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
"notes": [
{
"code": "jurisdiction_evidence_limits",
"params": {}
}
],
"value": 100,
"inputs": {
"meaning": "self-published location evidence; not nationality or citizenship",
"red_flag": false,
"exposures": [],
"policy_countries": [
"Russia",
"Iran",
"North Korea"
],
"commit_weight_rule": {
"min_commits": 50,
"min_commit_share": 0.1
},
"review_only_matches": 0,
"below_threshold_exposures": [],
"assessed_self_published_locations": 8
},
"components": [
{
"key": "policy_exposure_multiplier",
"name": "Policy exposure multiplier",
"detail": "no confirmed policy-scope location match",
"points": 100,
"status": "met",
"details": [
{
"code": "jurisdiction_no_match",
"params": {}
}
],
"max_points": 100
}
]
}
],
"description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
},
{
"key": "ai_readiness",
"band": "moderate",
"name": "AI Readiness",
"value": 64,
"weight": 0.04,
"metrics": [
{
"key": "ai_agent_context",
"band": "moderate",
"name": "Agent context & guidance",
"note": null,
"notes": [],
"value": 60,
"inputs": {
"has_llms_txt": true,
"legible_history_share": 0.01,
"agent_instruction_files": [
"AGENTS.md"
],
"agent_instruction_max_bytes": 9201
},
"components": [
{
"key": "agent_instructions",
"name": "Agent instructions",
"detail": "AGENTS.md",
"points": 45,
"status": "met",
"details": [
{
"code": "file_list",
"params": {
"files": "AGENTS.md"
}
}
],
"max_points": 45
},
{
"key": "machine_readable_docs_llms_txt",
"name": "Machine-readable docs (llms.txt)",
"detail": "llms.txt present",
"points": 15,
"status": "met",
"details": [
{
"code": "llms_txt_present",
"params": {}
}
],
"max_points": 15
},
{
"key": "legible_commit_history",
"name": "Legible commit history",
"detail": "1 of 97 human commits state their intent (structured subject or explanatory body)",
"points": 0.5,
"status": "partial",
"details": [
{
"code": "legible_history",
"params": {
"legible": 1,
"sampled": 97
}
}
],
"max_points": 40
}
]
},
{
"key": "ai_verify_loop",
"band": "good",
"name": "Verify loop (build / test / typecheck)",
"note": null,
"notes": [],
"value": 69,
"inputs": {
"has_nix": false,
"has_tests": true,
"lockfiles": [
"package-lock.json"
],
"has_dockerfile": true,
"typed_language": false,
"bootstrap_files": [
"Makefile",
"doc/Makefile"
],
"has_devcontainer": false,
"has_linter_config": false,
"typecheck_configs": [
"viewer-frontend/tsconfig.json"
],
"agent_commit_share": 0,
"toolchain_manifests": [],
"dependency_bot_commit_share": 0.03
},
"components": [
{
"key": "one_command_bootstrap",
"name": "One-command bootstrap",
"detail": "Makefile, doc/Makefile",
"points": 18,
"status": "met",
"details": [
{
"code": "file_list",
"params": {
"files": "Makefile, doc/Makefile"
}
}
],
"max_points": 18
},
{
"key": "automated_tests",
"name": "Automated tests",
"detail": null,
"points": 22,
"status": "met",
"details": [],
"max_points": 22
},
{
"key": "lint_format_config",
"name": "Lint / format config",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 11
},
{
"key": "static_type_checking",
"name": "Static type checking",
"detail": "viewer-frontend/tsconfig.json",
"points": 11,
"status": "met",
"details": [
{
"code": "file_list",
"params": {
"files": "viewer-frontend/tsconfig.json"
}
}
],
"max_points": 11
},
{
"key": "reproducible_environment",
"name": "Reproducible environment",
"detail": "Dockerfile, lockfile",
"points": 10,
"status": "met",
"details": [
{
"code": "file_list",
"params": {
"files": "Dockerfile, lockfile"
}
}
],
"max_points": 10
},
{
"key": "demonstrated_agent_practice",
"name": "Demonstrated agent practice",
"detail": "no agent-authored commits among the last 100",
"points": 0,
"status": "missed",
"details": [
{
"code": "no_agent_authored_commits",
"params": {
"sampled": 100
}
}
],
"max_points": 10
},
{
"key": "automated_maintenance",
"name": "Automated maintenance",
"detail": "3 of the last 100 commits are automated dependency updates",
"points": 8,
"status": "met",
"details": [
{
"code": "dependency_bot_commits",
"params": {
"count": 3,
"sampled": 100
}
}
],
"max_points": 8
},
{
"key": "openssf_scorecard_pinned_dependencies",
"name": "OpenSSF Scorecard: Pinned-Dependencies",
"detail": "dependency not pinned by hash detected -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 10
}
]
},
{
"key": "ai_code_legibility",
"band": "excellent",
"name": "Code legibility for models",
"note": null,
"notes": [],
"value": 80,
"inputs": {
"primary_language": "Python",
"largest_source_bytes": 3419873,
"source_files_sampled": 195,
"oversized_source_files": 9
},
"components": [
{
"key": "type_checkable_code",
"name": "Type-checkable code",
"detail": "Python with type-check config (viewer-frontend/tsconfig.json)",
"points": 27,
"status": "partial",
"details": [
{
"code": "typecheck_config_language",
"params": {
"files": "viewer-frontend/tsconfig.json",
"language": "Python"
}
}
],
"max_points": 45
},
{
"key": "manageable_file_sizes",
"name": "Manageable file sizes",
"detail": "9/195 source files over 60KB",
"points": 52.5,
"status": "partial",
"details": [
{
"code": "oversized_source_files",
"params": {
"kb": 60,
"sampled": 195,
"oversized": 9
}
}
],
"max_points": 55
}
]
},
{
"key": "ai_interfaces",
"band": "weak",
"name": "Machine-readable interfaces",
"note": null,
"notes": [],
"value": 40,
"inputs": {
"example_dirs": [
"examples",
"notebooks"
],
"has_mcp_signal": false,
"api_schema_files": []
},
"components": [
{
"key": "api_schema_openapi_graphql_proto",
"name": "API schema (OpenAPI/GraphQL/proto)",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 40
},
{
"key": "mcp_server",
"name": "MCP server",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 20
},
{
"key": "runnable_examples",
"name": "Runnable examples",
"detail": "examples, notebooks",
"points": 40,
"status": "met",
"details": [
{
"code": "file_list",
"params": {
"files": "examples, notebooks"
}
}
],
"max_points": 40
}
]
}
],
"description": "How well is the repo equipped to be developed and maintained with AI coding agents? Carries a deliberately small weight: agent tooling is a real maintenance signal, but its absence must never gate the top of the scale (calibration saturates at raw 91, so 100/100 remains reachable with AI Readiness at zero)."
}
],
"classification": {
"labels": [
"library",
"web-ui"
],
"scores": {
"web-ui": 4,
"library": 6
},
"primary": "library",
"evidence": [
{
"tier": "distribution",
"label": "library",
"source": "registry:pypi",
"weight": 6
},
{
"tier": "dependencies",
"label": "web-ui",
"source": "dep:react-dom",
"weight": 4
}
],
"artifacts": [],
"confidence": "medium",
"host_extension": false,
"runs_as_process": true,
"consumed_by_code": true
},
"metrics_version": "2.3.1"
},
"warnings": [
"Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token",
"deps.dev does not index pypi:moleculekit@1.15.7; advisories assessed against the repository dependency graph instead"
],
"report_type": "repository",
"generated_at": "2026-07-24T14:06:27.830803Z",
"schema_version": "0.27.0",
"badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/a/Acellera/moleculekit.svg",
"full_name": "Acellera/moleculekit",
"license_state": "custom",
"license_spdx": null
}Scores are signals, not warranties. They reflect publicly visible practices on GitHub — not a code audit, and not a security guarantee.
Missing data is excluded and weights renormalized, never scored as zero. Methodology is versioned and open: metrics v2.3.1, schema v0.27.0 — full methodology · metrics wiki.
How one result sits in the wider record: aggregate statistics — PyPI.