Public record
Software health reportschema 0.11.0 · metrics 1.13.0 · 2026-07-15 16:59 UTC

plotly / dash-bio

Open-source bioinformatics components for Dash

Python · CSS · JavaScriptMIT★ 573 stars⑂ 194 forkssince Jul 2018View on GitHub ↗
#bioinformatics#biojs#dash

plotly/dash-bio holds a health index of 59 out of 100, placing it in the Moderate band. It scores highest on Community & Adoption (73/100) and lowest on AI Readiness (33/100). It was last updated 47 days ago. 2 contributors account for most of its recent work.

59
overall / 100
Moderate

Software health index

Metrics are grouped into weighted categories on one standardized 1–100 scale. Overall starts as their weighted mean; when public evidence triggers the High-Risk Jurisdiction Policy, the rating is adjusted and receives an At risk ceiling of 49. AI Readiness sits outside the overall score.

59
Excellent85-100Exemplary; meets essentially all checked criteria
Good70-84Healthy; minor gaps
Moderate50-69Acceptable with notable gaps; review recommended
At risk30-49Significant weaknesses; adoption warrants caution
Critical1-29Severe problems (abandoned, single-maintainer, no hygiene)
VitalityCommunity &AdoptionSustainability &GovernanceEngineeringQualitySecurityAI Readiness

Score profile

Each axis is a category. The shape matters more than the average — a healthy subject fills the whole shape, while a spike-and-crater profile means strength in one dimension is masking risk in another.

Ownership

PlotlyOrganization
2,067 followers230 public repossince Nov 2013

This repository is backed by an organization — shared, accountable stewardship that can outlive any single maintainer.

Package ecosystems

RegistryPackageVersionDownloads / moVersionsLast publish
npmdash-bio1.0.2566571579 days ago

Metrics by category

Vitality

Is the project alive — is code being written and are releases shipping?

40At risk · 22% of overall

Development activity

26Critical
How it's scored
18/36Push recency — last push 47 days ago
2.1/36Commit cadence — 3/52 weeks with commits
6.3/18Commit volume — 4 commits in the last year
0/10OpenSSF Scorecard: Maintained — 1 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
Inputs used
commits_last_year4
human_commit_share—
days_since_last_push47
active_weeks_last_year3

Release discipline

60Moderate
How it's scored
27/27Ships releases — 22 releases published
0/36Release recency — latest release 1,579 days ago
27/27Release cadence — a release every ~37 days
0/10OpenSSF Scorecard: Signed-Releases — no data
Inputs used
releases_count22
latest_release_tagv1.0.2
releases_from_tagsno
days_since_latest_release1,579
mean_days_between_releases37
Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Signed-Releases. Remaining weights renormalized.

Community & Adoption

Does the project have users, downloads, attention, and a welcoming setup for contributors?

73Good · 18% of overall

Popularity & adoption

73Good
How it's scored
44.7/60Stars — 573 stars
19/25Forks — 194 forks
9.1/15Watchers — 44 watchers
Inputs used
forks194
stars573
watchers44
growth_stateunverified
growth_factor_pct100
growth_unverified_reasonno_history

Community health

92Excellent
How it's scored
22.5/22.5README
22.5/22.5License — recognized license (MIT)
18/18CONTRIBUTING guide
13.5/13.5Code of conduct
0/7.2Issue template
6.3/6.3PR template
Inputs used
has_readmeyes
has_licenseyes
has_contributingyes
has_issue_templateno
has_code_of_conductyes
has_pull_request_templateyes

Ecosystem adoption (downloads)

46At risk
How it's scored
36.7/80Monthly downloads — 566 downloads/month across npm
0/20Registry dependents — not reported by this ecosystem
Inputs used
packagesdash-bio
dependents—
ecosystemsnpm
total_downloads—
monthly_downloads566
Excluded from scoring (no data or not applicable): Registry dependents. Remaining weights renormalized.

Sustainability & Governance

Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?

72Good · 24% of overall

Maintainer resilience (bus factor)

64Moderate
How it's scored
25.2/54Bus factor — 2 contributor(s) cover half of all commits
15.7/22.5Commit distribution — top contributor authored 30% of commits
13.5/13.5Contributor breadth — 38 contributors
10/10OpenSSF Scorecard: Contributors — project has 20 contributing companies or organizations
Inputs used
bus_factor2
contributors_sampled38
top_contributor_share0.304

Issue & PR responsiveness

76Good
How it's scored
39.4/46.8Issue resolution — 84% of issues closed
29.2/38.3PR acceptance — 373/489 decided PRs merged
7.5/15OpenSSF Scorecard: Code-Review — Found 10/19 approved changesets -- score normalized to 5
Inputs used
merged_prs373
open_issues41
closed_issues219
issue_closed_ratio0.842
closed_unmerged_prs116

Ownership & stewardship

79Good
How it's scored
30/30Ownership backing — organization-owned
0/20Verified domain
23.8/25Owner reach — 2,067 followers of plotly
25/25Track record — 230 public repos, account ~12 yr old
Inputs used
followers2,067
owner_typeOrganization
is_verified—
owner_loginplotly
public_repos230
account_age_days4,619

Package maintenance

69Moderate
How it's scored
25/25Published & resolvable — 1 package(s) on npm
4/35Publish recency — latest publish 1,579 days ago
20/20Version history — 57 published versions
20/20Not deprecated — active, not deprecated or yanked
Inputs used
packagesdash-bio
ecosystemsnpm
any_deprecatedno
min_days_since_publish1,579

Engineering Quality

Are baseline engineering and documentation practices in place?

68Moderate · 20% of overall

Engineering practices

64Moderate
How it's scored
24/24CI workflows — 1 workflow(s)
24/24Tests present
16/16Linter config — .eslintrc, .pylintrc
0/9.6Pre-commit hooks
0/6.4.editorconfig
0/20OpenSSF Scorecard: CI-Tests — 0 out of 16 merged PRs checked by a CI test -- score normalized to 0
Inputs used
has_ciyes
has_testsyes
has_editorconfigno
has_linter_configyes
has_precommit_configno

Documentation

75Good
How it's scored
30/30README
0/25Documentation directory
15/15Documentation / homepage site — https://dash-gallery.plotly.host/Portal/?search=Bioinformatics
10/10Repository description
10/10Topics — 3 topics
10/10Wiki
Inputs used
topicsbioinformatics, biojs, dash
has_wikiyes
homepagehttps://dash-gallery.plotly.host/Portal/?search=Bioinformatics
has_readmeyes
has_docs_dirno
has_descriptionyes

Security

Are visible security and supply-chain practices strong, without unresolved high-risk jurisdiction exposure?

40At risk · 16% of overall

Security posture

40At risk
How it's scored
7.5/7.5Binary-Artifacts — no binaries found in the repo
0/7.5Branch-Protection — no data
0/2.5CI-Tests — 0 out of 16 merged PRs checked by a CI test -- score normalized to 0
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
3.8/7.5Code-Review — Found 10/19 approved changesets -- score normalized to 5
2.5/2.5Contributors — project has 20 contributing companies or organizations
10/10Dangerous-Workflow — no dangerous workflow patterns detected
7.5/7.5Dependency-Update-Tool — update tool detected
0/5Fuzzing — project is not fuzzed
2.5/2.5License — license file detected
0/7.5Maintained — 1 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
0/5Packaging — no data
0/5Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
0/5SAST — SAST tool is not run on all commits -- score normalized to 0
0/5Security-Policy — security policy file not detected
0/7.5Signed-Releases — no data
0/7.5Token-Permissions — detected GitHub workflow tokens with excessive permissions
0/7.5Vulnerabilities — 111 existing vulnerabilities detected
Inputs used
sourceopenssf_scorecard
checks_evaluated15
scorecard_versionv5.5.0
checks_inconclusive3
scorecard_aggregate4
Excluded from scoring (no data or not applicable): branch_protection, packaging, signed_releases. Remaining weights renormalized.

AI Readiness

How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score.

33At risk · 0% of overall

Agent context & guidance

1Critical
How it's scored
0/45Agent instructions — no CLAUDE.md / AGENTS.md / editor rules
0/15Machine-readable docs (llms.txt)
0/40Legible commit history — no data
Inputs used
has_llms_txtno
legible_history_share—
agent_instruction_files—
agent_instruction_max_bytes—
Excluded from scoring (no data or not applicable): Legible commit history. Remaining weights renormalized.

Verify loop (build / test / typecheck)

52Moderate
How it's scored
0/18One-command bootstrap
22/22Automated tests
11/11Lint / format config — .eslintrc, .pylintrc
0/11Static type checking
10/10Reproducible environment — lockfile
0/10Demonstrated agent practice — no data
0/8Automated maintenance — no data
0/10OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
Inputs used
has_nixno
has_testsyes
lockfilespackage-lock.json
has_dockerfileno
typed_languageno
bootstrap_files—
has_devcontainerno
has_linter_configyes
typecheck_configs—
agent_commit_share—
toolchain_manifests—
dependency_bot_commit_share—
Excluded from scoring (no data or not applicable): Demonstrated agent practice, Automated maintenance. Remaining weights renormalized.

Code legibility for models

48At risk
How it's scored
0/45Type-checkable code — Python without a type-check config
48/55Manageable file sizes — 22/174 source files over 60KB
Inputs used
primary_languagePython
largest_source_bytes3,476,985
source_files_sampled174
oversized_source_files22

Key facts

573GitHub stars
38contributors
4commits, last 12 months
47days since last push
22releases
2bus factor
41open issues
npm, PyPIpackage ecosystems

More detail

OpenSSF Scorecard 4.0 / 10
4.0aggregate

Independent, tool-agnostic security assessment from the open-source OpenSSF Scorecard. Each check rewards a security practice, not a specific vendor's tool. Checks Scorecard could not determine are marked n/a and excluded from the security score (never counted as zero).Scorecard v5.5.0 · 2026-07-15 16:58 UTC

10Binary-Artifactsno binaries found in the repo
n/aBranch-Protectioninternal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md
0CI-Tests0 out of 16 merged PRs checked by a CI test -- score normalized to 0
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
5Code-ReviewFound 10/19 approved changesets -- score normalized to 5
10Contributorsproject has 20 contributing companies or organizations
10Dangerous-Workflowno dangerous workflow patterns detected
10Dependency-Update-Toolupdate tool detected
0Fuzzingproject is not fuzzed
10Licenselicense file detected
0Maintained1 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
n/aPackagingpackaging workflow not detected
0Pinned-Dependenciesdependency not pinned by hash detected -- score normalized to 0
0SASTSAST tool is not run on all commits -- score normalized to 0
0Security-Policysecurity policy file not detected
n/aSigned-Releasesno releases found
0Token-Permissionsdetected GitHub workflow tokens with excessive permissions
0Vulnerabilities111 existing vulnerabilities detected
Direct dependencies 19
RegistryPackageVersion constraintManifest
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All dependencies 1,772

Full resolved dependency set from the GitHub dependency graph: 25 direct and 1,747 indirect (transitive) packages. The transitive closure is complete when the repository commits a lockfile.

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                "key": "openssf_scorecard_contributors",
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              {
                "key": "security_policy",
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                "detail": "security policy file not detected",
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                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "signed_releases",
                "name": "Signed-Releases",
                "detail": "no releases found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "token_permissions",
                "name": "Token-Permissions",
                "detail": "detected GitHub workflow tokens with excessive permissions",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "vulnerabilities",
                "name": "Vulnerabilities",
                "detail": "111 existing vulnerabilities detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              }
            ]
          },
          {
            "key": "high_risk_jurisdiction_exposure",
            "band": "excellent",
            "name": "High-Risk Jurisdiction Exposure",
            "note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
            "notes": [
              {
                "code": "jurisdiction_evidence_limits",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "meaning": "self-published location evidence; not nationality or citizenship",
              "red_flag": false,
              "exposures": [],
              "policy_countries": [
                "Russia",
                "Iran",
                "North Korea"
              ],
              "review_only_matches": 0,
              "assessed_self_published_locations": 6
            },
            "components": [
              {
                "key": "policy_exposure_multiplier",
                "name": "Policy exposure multiplier",
                "detail": "no confirmed policy-scope location match",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "jurisdiction_no_match",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
      },
      {
        "key": "ai_readiness",
        "band": "at_risk",
        "name": "AI Readiness",
        "value": 33,
        "weight": 0,
        "metrics": [
          {
            "key": "ai_agent_context",
            "band": "critical",
            "name": "Agent context & guidance",
            "note": "Excluded from scoring (no data or not applicable): Legible commit history. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "legible_commit_history"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
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            "value": 1,
            "inputs": {
              "has_llms_txt": false,
              "legible_history_share": null,
              "agent_instruction_files": [],
              "agent_instruction_max_bytes": null
            },
            "components": [
              {
                "key": "agent_instructions",
                "name": "Agent instructions",
                "detail": "no CLAUDE.md / AGENTS.md / editor rules",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_instructions",
                    "params": {}
                  }
                ],
                "max_points": 45
              },
              {
                "key": "machine_readable_docs_llms_txt",
                "name": "Machine-readable docs (llms.txt)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              },
              {
                "key": "legible_commit_history",
                "name": "Legible commit history",
                "detail": "no data",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "ai_verify_loop",
            "band": "moderate",
            "name": "Verify loop (build / test / typecheck)",
            "note": "Excluded from scoring (no data or not applicable): Demonstrated agent practice, Automated maintenance. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "demonstrated_agent_practice",
                    "automated_maintenance"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 52,
            "inputs": {
              "has_nix": false,
              "has_tests": true,
              "lockfiles": [
                "package-lock.json"
              ],
              "has_dockerfile": false,
              "typed_language": false,
              "bootstrap_files": [],
              "has_devcontainer": false,
              "has_linter_config": true,
              "typecheck_configs": [],
              "agent_commit_share": null,
              "toolchain_manifests": [],
              "dependency_bot_commit_share": null
            },
            "components": [
              {
                "key": "one_command_bootstrap",
                "name": "One-command bootstrap",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 18
              },
              {
                "key": "automated_tests",
                "name": "Automated tests",
                "detail": null,
                "points": 22,
                "status": "met",
                "details": [],
                "max_points": 22
              },
              {
                "key": "lint_format_config",
                "name": "Lint / format config",
                "detail": ".eslintrc, .pylintrc",
                "points": 11,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": ".eslintrc, .pylintrc"
                    }
                  }
                ],
                "max_points": 11
              },
              {
                "key": "static_type_checking",
                "name": "Static type checking",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "reproducible_environment",
                "name": "Reproducible environment",
                "detail": "lockfile",
                "points": 10,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "lockfile"
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "demonstrated_agent_practice",
                "name": "Demonstrated agent practice",
                "detail": "no data",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              },
              {
                "key": "automated_maintenance",
                "name": "Automated maintenance",
                "detail": "no data",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 8
              },
              {
                "key": "openssf_scorecard_pinned_dependencies",
                "name": "OpenSSF Scorecard: Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "ai_code_legibility",
            "band": "at_risk",
            "name": "Code legibility for models",
            "note": null,
            "notes": [],
            "value": 48,
            "inputs": {
              "primary_language": "Python",
              "largest_source_bytes": 3476985,
              "source_files_sampled": 174,
              "oversized_source_files": 22
            },
            "components": [
              {
                "key": "type_checkable_code",
                "name": "Type-checkable code",
                "detail": "Python without a type-check config",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_typecheck_config_language",
                    "params": {
                      "language": "Python"
                    }
                  }
                ],
                "max_points": 45
              },
              {
                "key": "manageable_file_sizes",
                "name": "Manageable file sizes",
                "detail": "22/174 source files over 60KB",
                "points": 48,
                "status": "partial",
                "details": [
                  {
                    "code": "oversized_source_files",
                    "params": {
                      "kb": 60,
                      "sampled": 174,
                      "oversized": 22
                    }
                  }
                ],
                "max_points": 55
              }
            ]
          }
        ],
        "description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
      }
    ],
    "metrics_version": "1.13.0"
  },
  "warnings": [],
  "report_type": "repository",
  "generated_at": "2026-07-15T16:59:21.021850Z",
  "schema_version": "0.11.0",
  "badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/p/plotly/dash-bio.svg",
  "full_name": "plotly/dash-bio",
  "license_state": "standard",
  "license_spdx": "MIT"
}

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Scores are signals, not warranties. They reflect publicly visible practices on GitHub — not a code audit, and not a security guarantee.

Missing data is excluded and weights renormalized, never scored as zero. Methodology is versioned and open: metrics v1.13.0, schema v0.11.0 — full methodology · metrics wiki.

How one result sits in the wider record: aggregate statistics — npm.