All tags
Catalogue tag

#pdb

Every repository in the public record carrying this tag — from its GitHub topics or the keywords its package registries publish. Health is measured under the same versioned methodology as the rest of the record.

55 records
Tagged “pdb”Ranked by health index
PyPI
53Moderatehealth index
crabisoft/pdbstore
Publish PDB and PE files to symbols store
Python★ 2↓ 35/moSep 8, 2026
MITSep 8, 2026 · metrics 2.10.0
PyPI · crates.io · npm
53Moderatehealth index
miguelcsx/molframe
:dna: A batteries-included structural bioinformatics engine
Rust★ 0↓ 3,477/moOct 10, 2026
MITOct 10, 2026 · metrics 2.10.0
PyPI · npm
51Moderatehealth index
N283T/pdb-mine-builder
Build a Mine-schema database from PDB data. Load PDBj structural biology data into PostgreSQL with RDKit chemical search support.
Python★ 0↓ 69/moSep 8, 2026
MITSep 8, 2026 · metrics 2.10.0
npm
48Weakhealth index
juliocesar-io/nano-protein-viewer-react
React component for visualizing protein structures with the Mol* framework.
TypeScript★ 9↓ 78/moSep 8, 2026
MITSep 8, 2026 · metrics 2.10.0
npm
45Weakhealth index
BugSplat-Git/pdb-guid
💻🪟👀 Peek into Windows symbol files to read their unique identifiers
TypeScript★ 0↓ 3,416/moSep 8, 2026
No licenseSep 8, 2026 · metrics 2.10.0
PyPI
45Weakhealth index
N283T/view-cif
CLI tool to view CIF files from various sources in your editor
Python★ 0↓ 17/moSep 8, 2026
MITSep 8, 2026 · metrics 2.10.0
PyPI
45Weakhealth index
gqy20/protein-mcp
FastMCP-based protein data access tools for bioinformatics research
Python★ 0↓ 682/moSep 8, 2026
MITSep 8, 2026 · metrics 2.10.0
PyPI
44Weakhealth index
PDBeurope/mmcif-gen
This application is designed to create mmcif files from facilities data.
Python★ 7Sep 10, 2026
No licenseSep 10, 2026 · metrics 2.10.0
PyPI
42Weakhealth index
gotcha/ipdb
Integration of IPython pdb
Python★ 1,974↓ 15.4M/moSep 10, 2026
BSD-3-ClauseSep 10, 2026 · metrics 2.10.0
PyPI
41Weakhealth index
a-r-j/CPDB
Cython implementation of PDB -> DataFrame parsing
Cython · Jupyter Notebook · Python★ 34↓ 20.1K/moSep 8, 2026
MITSep 8, 2026 · metrics 2.10.0
PyPI
39Weakhealth index
cifkao/nopdb
NoPdb: Non-interactive Python Debugger
Python★ 84↓ 1,243/moSep 8, 2026
BSD-3-ClauseSep 8, 2026 · metrics 2.10.0
PyPI
35Weakhealth index
diggerdu/apdb
apdb: python debugger for agents
Python★ 1↓ 36/moSep 8, 2026
BSD-2-ClauseSep 8, 2026 · metrics 2.10.0
PyPI
34At Riskhealth index
ShintaroMinami/pdbutil
A simple module for handling protein backbone coordinates.
Python★ 1↓ 826/moSep 8, 2026
MITSep 8, 2026 · metrics 2.10.0
PyPI
32At Riskhealth index
PDBeurope/pdbecif
A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"
Python★ 38↓ 2,697/moSep 9, 2026
Apache-2.0Sep 9, 2026 · metrics 2.10.0
npm · crates.io
29At Riskhealth index
i-VRESSE/pdbtbx-ts
JS wrapper around pdbtbx rust crate
Rust · JavaScript★ 1↓ 169/moSep 8, 2026
Apache-2.0Sep 8, 2026 · metrics 2.10.0
PyPI
26At Riskhealth index
MoseleyBioinformaticsLab/pdb_eda
A Python tool for parsing and analyzing electron density maps data available from the worldwide Protein Data Bank
Python★ 13Sep 8, 2026
Custom licenseSep 8, 2026 · metrics 2.10.0
PyPI
25At Riskhealth index
amorehead/pdb-tools
A dependency-free cross-platform swiss army knife for PDB files.
Python★ 0↓ 995/moSep 8, 2026
Apache-2.0Sep 8, 2026 · metrics 2.10.0
npm
25At Riskhealth index
samirelanduk/molstar-react
Molstar as a react component
JavaScript★ 30↓ 1,169/moOct 18, 2026
ISCOct 18, 2026 · metrics 2.10.0
—
23At Riskhealth index
UCLOrengoGroup/cath-tools
Protein structure comparison tools such as SSAP and SNAP
C++ · Promela★ 68Sep 8, 2026
GPL-3.0Sep 8, 2026 · metrics 2.10.0
npm
23At Riskhealth index
fabiomcosta/thebugger
🐞debug a nodejs process without inspect flags.
JavaScript★ 93↓ 29/moOct 22, 2026
MITOct 22, 2026 · metrics 2.10.0
npm
16Criticalhealth index
BioPolymer/bio-pdb
PDB-related web components
JavaScript★ 0↓ 27/moSep 9, 2026
Apache-2.0Sep 9, 2026 · metrics 2.10.0
NuGet
16Criticalhealth index
ctaggart/SourceLink
Source Code On Demand
C#★ 354Sep 11, 2026
MITSep 11, 2026 · metrics 2.10.0
PyPI
15Criticalhealth index
antigenomics/tcren
Predicting TCR:pMHC binding from structural data
Jupyter Notebook · Python★ 28↓ 7,044/moSep 11, 2026
GPL-3.0Sep 11, 2026 · metrics 2.10.0
npm
14Criticalhealth index
justinmc/tiny-molecule
A small, developer-friendly 3D molecule viewer for the modern web
JavaScript★ 4↓ 39/moSep 8, 2026
MITSep 8, 2026 · metrics 2.10.0