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#transcriptomics

Every repository in the public record carrying this tag — from its GitHub topics or the keywords its package registries publish. Health is measured under the same versioned methodology as the rest of the record.

5 records
Tagged “transcriptomics”Ranked by health index
PyPI
98Exceptionalhealth index
scverse/anndata
Annotated data.
Python★ 768↓ 1.7M/moAug 27, 2026
BSD-3-ClauseAug 27, 2026 · metrics 2.10.0
PyPI
98Exceptionalhealth index
scverse/scanpy
Single-cell analysis in Python. Scales to >100M cells.
Python★ 2,559↓ 723.9K/moSep 12, 2026
BSD-3-ClauseSep 12, 2026 · metrics 2.10.0
PyPI
91Excellenthealth index
scverse/decoupler
Python package to perform enrichment analysis from omics data.
Python★ 294Sep 18, 2026
BSD-3-ClauseSep 18, 2026 · metrics 2.10.0
PyPI
87Excellenthealth index
ablab/IsoQuant
A universal toolkit for upstream processing of long RNA reads
Python★ 239Sep 10, 2026
Custom licenseSep 10, 2026 · metrics 2.10.0
PyPI · Go
71Goodhealth index
the-omics-os/lobster
The self-evolving agentic framework for bioinformatics
Python★ 45↓ 765/moSep 8, 2026
Custom licenseSep 8, 2026 · metrics 2.10.0