Public recordGood
Software health reportschema 0.27.0 · metrics 1.13.0 · 2026-07-26 08:34 UTC
alan-turing-institute / autoemulate
Emulate simulations easily
alan-turing-institute/autoemulate holds a health index of 79 out of 100, placing it in the Good band. It scores highest on Vitality (94/100) and lowest on Security (52/100). It was last updated today. 2 contributors account for most of its recent work.
79
overall / 100Software health index
Metrics are grouped into weighted categories on one standardized 1–100 scale. Overall starts as their weighted mean; when public evidence triggers the High-Risk Jurisdiction Policy, the rating is adjusted and receives an At risk ceiling of 49. AI Readiness sits outside the overall score.
79
Excellent85-100Exemplary; meets essentially all checked criteria
Good70-84Healthy; minor gaps
Moderate50-69Acceptable with notable gaps; review recommended
At risk30-49Significant weaknesses; adoption warrants caution
Critical1-29Severe problems (abandoned, single-maintainer, no hygiene)
Score profile
Each axis is a category. The shape matters more than the average — a healthy subject fills the whole shape, while a spike-and-crater profile means strength in one dimension is masking risk in another.
Ownership
The Alan Turing InstituteOrganization
1,007 followers657 public repossince Apr 2016
This repository is backed by an organization — shared, accountable stewardship that can outlive any single maintainer.
Package ecosystems
| Registry | Package | Version | Downloads / mo | Versions | Last publish |
|---|---|---|---|---|---|
| PyPI | autoemulate | 2.1.2 | - | 18 | 19 days ago |
Metrics by category
Vitality
Is the project alive — is code being written and are releases shipping?
94
Development activity
90Excellent
How it's scored
| 36/36 | Push recency — last push 0 days ago |
| 25.6/36 | Commit cadence — 37/52 weeks with commits |
| 18/18 | Commit volume — 1,306 commits in the last year |
| 10/10 | OpenSSF Scorecard: Maintained — 30 commit(s) and 15 issue activity found in the last 90 days -- score normalized to 10 |
Inputs used
| commits_last_year | 1,306 |
| human_commit_share | 0.88 |
| days_since_last_push | 0 |
| active_weeks_last_year | 37 |
Release discipline
100Excellent
How it's scored
| 27/27 | Ships releases — 17 releases published |
| 36/36 | Release recency — latest release 18 days ago |
| 27/27 | Release cadence — a release every ~41.9 days |
| 0/10 | OpenSSF Scorecard: Signed-Releases — no data |
Inputs used
| releases_count | 17 |
| latest_release_tag | v2.1.2 |
| releases_from_tags | no |
| days_since_latest_release | 18 |
| mean_days_between_releases | 41.9 |
Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Signed-Releases. Remaining weights renormalized.
Community & Adoption
Does the project have users, downloads, attention, and a welcoming setup for contributors?
66
Popularity & adoption
50Moderate
How it's scored
| 33.5/60 | Stars — 118 stars |
| 13.4/25 | Forks — 42 forks |
| 3.3/15 | Watchers — 5 watchers |
Inputs used
| forks | 42 |
| stars | 118 |
| watchers | 5 |
| growth_state | unverified |
| growth_factor_pct | 100 |
| growth_unverified_reason | no_history |
Community health
85Excellent
How it's scored
| 22.5/22.5 | README |
| 22.5/22.5 | License — recognized license (MIT) |
| 18/18 | CONTRIBUTING guide |
| 13.5/13.5 | Code of conduct |
| 0/7.2 | Issue template |
| 0/6.3 | PR template |
Inputs used
| has_readme | yes |
| has_license | yes |
| has_contributing | yes |
| has_issue_template | no |
| has_code_of_conduct | yes |
| has_pull_request_template | no |
Sustainability & Governance
Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?
82
Maintainer resilience (bus factor)
65Moderate
How it's scored
| 25.2/54 | Bus factor — 2 contributor(s) cover half of all commits |
| 16/22.5 | Commit distribution — top contributor authored 29% of commits |
| 13.5/13.5 | Contributor breadth — 24 contributors |
| 10/10 | OpenSSF Scorecard: Contributors — project has 26 contributing companies or organizations |
Inputs used
| bus_factor | 2 |
| contributors_sampled | 24 |
| top_contributor_share | 0.289 |
Issue & PR responsiveness
92Excellent
How it's scored
| 41.3/46.8 | Issue resolution — 88% of issues closed |
| 35.2/38.3 | PR acceptance — 453/492 decided PRs merged |
| 15/15 | OpenSSF Scorecard: Code-Review — all changesets reviewed |
Inputs used
| merged_prs | 453 |
| open_issues | 60 |
| closed_issues | 454 |
| issue_closed_ratio | 0.883 |
| closed_unmerged_prs | 39 |
Ownership & stewardship
77Good
How it's scored
| 30/30 | Ownership backing — organization-owned |
| 0/20 | Verified domain |
| 21.6/25 | Owner reach — 1,007 followers of alan-turing-institute |
| 25/25 | Track record — 657 public repos, account ~10 yr old |
Inputs used
| followers | 1,007 |
| owner_type | Organization |
| is_verified | — |
| owner_login | alan-turing-institute |
| public_repos | 657 |
| account_age_days | 3,762 |
Package maintenance
100Excellent
How it's scored
| 25/25 | Published & resolvable — 1 package(s) on pypi |
| 35/35 | Publish recency — latest publish 19 days ago |
| 20/20 | Version history — 18 published versions |
| 20/20 | Not deprecated — active, not deprecated or yanked |
Inputs used
| packages | autoemulate |
| ecosystems | pypi |
| any_deprecated | no |
| min_days_since_publish | 19 |
Engineering Quality
Are baseline engineering and documentation practices in place?
90
Engineering practices
94Excellent
How it's scored
| 24/24 | CI workflows — 5 workflow(s) |
| 24/24 | Tests present |
| 16/16 | Linter config |
| 9.6/9.6 | Pre-commit hooks |
| 0/6.4 | .editorconfig |
| 20/20 | OpenSSF Scorecard: CI-Tests — 9 out of 9 merged PRs checked by a CI test -- score normalized to 10 |
Inputs used
| has_ci | yes |
| has_tests | yes |
| has_editorconfig | no |
| has_linter_config | yes |
| has_precommit_config | yes |
Documentation
85Excellent
How it's scored
| 30/30 | README |
| 25/25 | Documentation directory |
| 0/15 | Documentation / homepage site |
| 10/10 | Repository description |
| 10/10 | Topics — 14 topics |
| 10/10 | Wiki |
Inputs used
| topics | hut23, hut23-1468, emulation, pytorch, active-learning, calibration, gaussian-processes, mcmc, sensitivity-analysis, uncertainty-quantification, ensemble, history-matching, neural-networks, aiphys |
| has_wiki | yes |
| homepage | — |
| has_readme | yes |
| has_docs_dir | yes |
| has_description | yes |
Security
Are visible security and supply-chain practices strong, without unresolved high-risk jurisdiction exposure?
52
Security posture
47At risk
How it's scored
| 7.5/7.5 | Binary-Artifacts — no binaries found in the repo |
| 0/7.5 | Branch-Protection — no data |
| 2.5/2.5 | CI-Tests — 9 out of 9 merged PRs checked by a CI test -- score normalized to 10 |
| 0/2.5 | CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected |
| 7.5/7.5 | Code-Review — all changesets reviewed |
| 2.5/2.5 | Contributors — project has 26 contributing companies or organizations |
| 10/10 | Dangerous-Workflow — no dangerous workflow patterns detected |
| 0/7.5 | Dependency-Update-Tool — no update tool detected |
| 0/5 | Fuzzing — project is not fuzzed |
| 2.5/2.5 | License — license file detected |
| 7.5/7.5 | Maintained — 30 commit(s) and 15 issue activity found in the last 90 days -- score normalized to 10 |
| 0/5 | Packaging — no data |
| 0/5 | Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
| 0/5 | SAST — SAST tool is not run on all commits -- score normalized to 0 |
| 0/5 | Security-Policy — security policy file not detected |
| 0/7.5 | Signed-Releases — no data |
| 0/7.5 | Token-Permissions — detected GitHub workflow tokens with excessive permissions |
| 0/7.5 | Vulnerabilities — 109 existing vulnerabilities detected |
Inputs used
| source | openssf_scorecard |
| checks_evaluated | 15 |
| scorecard_version | v5.5.0 |
| checks_inconclusive | 3 |
| scorecard_aggregate | 4.7 |
Excluded from scoring (no data or not applicable): branch_protection, packaging, signed_releases. Remaining weights renormalized.
Dependency advisories
70Good
How it's scored
| 35/35 | Direct dependencies free of known advisories — no direct dependency carries a known advisory |
| 6.3/25 | Indirect dependencies free of known advisories — 2 affected: setuptools 68.0.0 (high 8.8), wheel 0.41.0 (high 7.1) |
| 28.6/40 | No advisories left outstanding — 2 advisory-carrying package(s) unaddressed past 90 days; oldest published 741 days ago |
Inputs used
| source | osv |
| advisories | 8 |
| affected_packages | 2 |
| assessed_packages | 172 |
| unassessed_packages | 0 |
| affected_by_severity | high 2 |
| direct_affected_packages | 0 |
Matched the pypi:autoemulate@2.1.2 runtime dependency closure — what installing the published package pulls in — 172 packages. Reachability is not analyzed.
AI Readiness
How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score.
53
Agent context & guidance
70Good
How it's scored
| 45/45 | Agent instructions — AGENTS.md |
| 0/15 | Machine-readable docs (llms.txt) |
| 24.8/40 | Legible commit history — 41 of 88 human commits state their intent (structured subject or explanatory body) |
Inputs used
| has_llms_txt | no |
| legible_history_share | 0.466 |
| agent_instruction_files | AGENTS.md |
| agent_instruction_max_bytes | 4,030 |
How it's scored
| 0/18 | One-command bootstrap |
| 22/22 | Automated tests |
| 11/11 | Lint / format config |
| 0/11 | Static type checking |
| 10/10 | Reproducible environment — lockfile |
| 2/10 | Demonstrated agent practice — 1 of the last 100 commits agent-authored or agent-credited |
| 0/8 | Automated maintenance — no automated dependency updates observed |
| 0/10 | OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
Inputs used
| has_nix | no |
| has_tests | yes |
| lockfiles | uv.lock |
| has_dockerfile | no |
| typed_language | no |
| bootstrap_files | — |
| has_devcontainer | no |
| has_linter_config | yes |
| typecheck_configs | — |
| agent_commit_share | 0.01 |
| toolchain_manifests | — |
| dependency_bot_commit_share | 0 |
Code legibility for models
55Moderate
How it's scored
| 0/45 | Type-checkable code — Python without a type-check config |
| 55/55 | Manageable file sizes — 0/113 source files over 60KB |
Inputs used
| primary_language | Python |
| largest_source_bytes | 50,214 |
| source_files_sampled | 113 |
| oversized_source_files | 0 |
Machine-readable interfaces
40At risk
How it's scored
| 0/40 | API schema (OpenAPI/GraphQL/proto) |
| 0/20 | MCP server |
| 40/40 | Runnable examples — notebooks |
Inputs used
| example_dirs | notebooks |
| has_mcp_signal | no |
| api_schema_files | — |
Key facts
118GitHub stars
24contributors
1,306commits, last 12 months
0days since last push
17releases
2bus factor
60open issues
PyPIpackage ecosystems
Data collection warnings
- Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token
More detail
Star and fork history 0 ★ / 42 ⇿
0Stars
42Forks
16Releases
When each star and fork was added, collected from GitHub and bucketed by day. Cumulative growth sits directly above the daily additions it is made of, so the two read against each other: steady organic accretion looks nothing like an abrupt, short-lived burst. Where that difference is measurable, it is reported as growth authenticity.
Major 2Minor 6Patch 7
Each point covers 3 days.
OpenSSF Scorecard 4.7 / 10
4.7aggregate
Independent, tool-agnostic security assessment from the open-source OpenSSF Scorecard. Each check rewards a security practice, not a specific vendor's tool. Checks Scorecard could not determine are marked n/a and excluded from the security score (never counted as zero).
| 10 | Binary-Artifacts | no binaries found in the repo |
| n/a | Branch-Protection | internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md |
| 10 | CI-Tests | 9 out of 9 merged PRs checked by a CI test -- score normalized to 10 |
| 0 | CII-Best-Practices | no effort to earn an OpenSSF best practices badge detected |
| 10 | Code-Review | all changesets reviewed |
| 10 | Contributors | project has 26 contributing companies or organizations |
| 10 | Dangerous-Workflow | no dangerous workflow patterns detected |
| 0 | Dependency-Update-Tool | no update tool detected |
| 0 | Fuzzing | project is not fuzzed |
| 10 | License | license file detected |
| 10 | Maintained | 30 commit(s) and 15 issue activity found in the last 90 days -- score normalized to 10 |
| n/a | Packaging | packaging workflow not detected |
| 0 | Pinned-Dependencies | dependency not pinned by hash detected -- score normalized to 0 |
| 0 | SAST | SAST tool is not run on all commits -- score normalized to 0 |
| 0 | Security-Policy | security policy file not detected |
| n/a | Signed-Releases | no releases found |
| 0 | Token-Permissions | detected GitHub workflow tokens with excessive permissions |
| 0 | Vulnerabilities | 109 existing vulnerabilities detected |
Direct dependencies 22
| Registry | Package | Version constraint | Manifest |
|---|---|---|---|
| PyPI | matplotlib | >=3.7.2 | pyproject.toml |
| PyPI | seaborn | >=0.12.2 | pyproject.toml |
| PyPI | scikit-learn | >=1.3.0 | pyproject.toml |
| PyPI | pandas | >=2.1 | pyproject.toml |
| PyPI | torch | >=2.1.0 | pyproject.toml |
| PyPI | scipy | >=1.11.3 | pyproject.toml |
| PyPI | numpy | >=1.24 | pyproject.toml |
| PyPI | joblib | >=1.3.2 | pyproject.toml |
| PyPI | tqdm | >=4.66.2 | pyproject.toml |
| PyPI | lightgbm | >=4.3.0 | pyproject.toml |
| PyPI | ipywidgets | >=8.1.2 | pyproject.toml |
| PyPI | gpytorch | >=1.12 | pyproject.toml |
| PyPI | salib | >=1.5.1 | pyproject.toml |
| PyPI | torcheval | >=0.0.7 | pyproject.toml |
| PyPI | anytree | >=2.12.1 | pyproject.toml |
| PyPI | torchmetrics | >=1.7.1 | pyproject.toml |
| PyPI | pyro-ppl | >=1.9.1 | pyproject.toml |
| PyPI | torchrbf | >=0.0.1 | pyproject.toml |
| PyPI | arviz | >=0.21.0,<1.0 | pyproject.toml |
| PyPI | getdist | >=1.7.2 | pyproject.toml |
| PyPI | einops | >=0.8.1 | pyproject.toml |
| PyPI | harmonic | >=1.3.0 | pyproject.toml |
All dependencies 316
Full resolved dependency set from the GitHub dependency graph: 27 direct and 289 indirect (transitive) packages. The transitive closure is complete when the repository commits a lockfile.
| Registry | Package | Version | Relation |
|---|---|---|---|
| PyPI | anytree | 2.13.0 | direct |
| PyPI | arviz | 0.22.0 | direct |
| PyPI | einops | 0.8.1 | direct |
| PyPI | getdist | 1.7.2 | direct |
| PyPI | gpytorch | 1.14 | direct |
| PyPI | harmonic | 1.3.0 | direct |
| PyPI | harmonic | 1.3.1 | direct |
| PyPI | ipywidgets | 8.1.7 | direct |
| PyPI | joblib | 1.5.1 | direct |
| PyPI | lightgbm | 4.6.0 | direct |
| PyPI | matplotlib | 3.10.5 | direct |
| PyPI | numpy | 1.26.4 | direct |
| PyPI | numpy | 2.3.2 | direct |
| PyPI | pandas | 2.3.1 | direct |
| PyPI | pyro-ppl | 1.9.1 | direct |
| PyPI | salib | 1.5.1 | direct |
| PyPI | scikit-learn | 1.7.2 | direct |
| PyPI | scikit-learn | 1.8.0 | direct |
| PyPI | scipy | 1.15.3 | direct |
| PyPI | scipy | 1.16.1 | direct |
| PyPI | seaborn | 0.13.2 | direct |
| PyPI | torch | 2.11.0+cu126 | direct |
| PyPI | torch | 2.7.1 | direct |
| PyPI | torcheval | 0.0.7 | direct |
| PyPI | torchmetrics | 1.8.0 | direct |
| PyPI | torchrbf | 1.0.0 | direct |
| PyPI | tqdm | 4.67.1 | direct |
| PyPI | absl-py | 2.4.0 | indirect |
| PyPI | accessible-pygments | 0.0.5 | indirect |
| PyPI | aiofiles | 25.1.0 | indirect |
| PyPI | alabaster | 0.7.16 | indirect |
| PyPI | annotated-types | 0.7.0 | indirect |
| PyPI | anyio | 4.13.0 | indirect |
| PyPI | appnope | 0.1.4 | indirect |
| PyPI | argon2-cffi | 25.1.0 | indirect |
| PyPI | argon2-cffi-bindings | 25.1.0 | indirect |
| PyPI | arrow | 1.4.0 | indirect |
| PyPI | asciitree | 0.3.3 | indirect |
| PyPI | asttokens | 3.0.0 | indirect |
| PyPI | async-lru | 2.3.0 | indirect |
| PyPI | attrs | 25.3.0 | indirect |
| PyPI | autoemulate | 1.1 | indirect |
| PyPI | autoemulate | 2.1.1 | indirect |
| PyPI | babel | 2.17.0 | indirect |
| PyPI | beautifulsoup4 | 4.13.4 | indirect |
| PyPI | black | 25.1.0 | indirect |
| PyPI | bleach | 6.3.0 | indirect |
| PyPI | certifi | 2025.7.14 | indirect |
| PyPI | cffi | 1.17.1 | indirect |
| PyPI | cfgv | 3.4.0 | indirect |
| PyPI | charset-normalizer | 3.4.2 | indirect |
| PyPI | chex | 0.1.90 | indirect |
| PyPI | click | 8.2.1 | indirect |
| PyPI | cloudpickle | 3.1.2 | indirect |
| PyPI | colorama | 0.4.6 | indirect |
| PyPI | colorlog | 6.10.1 | indirect |
| PyPI | comm | 0.2.3 | indirect |
| PyPI | configmypy | 0.2.0 | indirect |
| PyPI | contourpy | 1.3.2 | indirect |
| PyPI | contourpy | 1.3.3 | indirect |
| PyPI | coverage | 7.10.1 | indirect |
| PyPI | crc32c | 2.7.1 | indirect |
| PyPI | cuda-bindings | 12.9.6 | indirect |
| PyPI | cuda-pathfinder | 1.5.4 | indirect |
| PyPI | cuda-toolkit | 12.6.3 | indirect |
| PyPI | cycler | 0.12.1 | indirect |
| PyPI | cython | 3.2.4 | indirect |
| PyPI | dataclasses-json | 0.6.7 | indirect |
| PyPI | debugpy | 1.8.15 | indirect |
| PyPI | decorator | 5.2.1 | indirect |
| PyPI | defusedxml | 0.7.1 | indirect |
| PyPI | dill | 0.4.0 | indirect |
| PyPI | distlib | 0.4.0 | indirect |
| PyPI | distrax | 0.1.5 | indirect |
| PyPI | distrax | 0.1.7 | indirect |
| PyPI | dm-tree | 0.1.9 | indirect |
| PyPI | docutils | 0.21.2 | indirect |
| PyPI | donfig | 0.8.1.post1 | indirect |
| PyPI | etils | 1.13.0 | indirect |
| PyPI | etils | 1.14.0 | indirect |
| PyPI | exceptiongroup | 1.3.0 | indirect |
| PyPI | execnet | 2.1.2 | indirect |
| PyPI | executing | 2.2.0 | indirect |
| PyPI | fasteners | 0.20 | indirect |
| PyPI | fastjsonschema | 2.21.1 | indirect |
| PyPI | filelock | 3.18.0 | indirect |
| PyPI | flax | 0.10.7 | indirect |
| PyPI | flax | 0.12.6 | indirect |
| PyPI | fonttools | 4.59.0 | indirect |
| PyPI | fqdn | 1.5.1 | indirect |
| PyPI | fsspec | 2025.7.0 | indirect |
| PyPI | furo | 2025.7.19 | indirect |
| PyPI | gast | 0.7.0 | indirect |
| PyPI | gitdb | 4.0.12 | indirect |
| PyPI | gitpython | 3.1.45 | indirect |
| PyPI | greenlet | 3.2.3 | indirect |
| PyPI | h11 | 0.16.0 | indirect |
| PyPI | h5netcdf | 1.6.3 | indirect |
| PyPI | h5py | 3.14.0 | indirect |
| PyPI | httpcore | 1.0.9 | indirect |
| PyPI | httpx | 0.28.1 | indirect |
| PyPI | humanize | 4.15.0 | indirect |
| PyPI | identify | 2.6.12 | indirect |
| PyPI | idna | 3.10 | indirect |
| PyPI | imagesize | 1.4.1 | indirect |
| PyPI | importlib-metadata | 8.7.0 | indirect |
| PyPI | importlib-resources | 6.5.2 | indirect |
| PyPI | iniconfig | 2.1.0 | indirect |
| PyPI | ipykernel | 6.30.0 | indirect |
| PyPI | ipython | 8.37.0 | indirect |
| PyPI | ipython | 9.4.0 | indirect |
| PyPI | ipython-pygments-lexers | 1.1.1 | indirect |
| PyPI | isoduration | 20.11.0 | indirect |
| PyPI | jax | 0.6.2 | indirect |
| PyPI | jax | 0.9.2 | indirect |
| PyPI | jaxlib | 0.6.2 | indirect |
| PyPI | jaxlib | 0.9.2 | indirect |
| PyPI | jaxtyping | 0.3.2 | indirect |
| PyPI | jedi | 0.19.2 | indirect |
| PyPI | jinja2 | 3.1.6 | indirect |
| PyPI | json5 | 0.13.0 | indirect |
| PyPI | jsonpointer | 3.1.1 | indirect |
| PyPI | jsonschema | 4.25.0 | indirect |
| PyPI | jsonschema-specifications | 2025.4.1 | indirect |
| PyPI | jupyter | 1.1.1 | indirect |
| PyPI | jupyter-book | 1.0.4.post1 | indirect |
| PyPI | jupyter-cache | 1.0.1 | indirect |
| PyPI | jupyter-client | 8.6.3 | indirect |
| PyPI | jupyter-console | 6.6.3 | indirect |
| PyPI | jupyter-core | 5.8.1 | indirect |
| PyPI | jupyter-events | 0.12.0 | indirect |
| PyPI | jupyter-lsp | 2.3.0 | indirect |
| PyPI | jupyter-server | 2.17.0 | indirect |
| PyPI | jupyter-server-terminals | 0.5.4 | indirect |
| PyPI | jupyterlab | — | indirect |
| PyPI | jupyterlab | 4.4.5 | indirect |
| PyPI | jupyterlab-pygments | 0.3.0 | indirect |
| PyPI | jupyterlab-server | 2.28.0 | indirect |
| PyPI | jupyterlab-widgets | 3.0.15 | indirect |
| PyPI | kiwisolver | 1.4.8 | indirect |
| PyPI | lark | 1.3.1 | indirect |
| PyPI | latexcodec | 3.0.1 | indirect |
| PyPI | lightning-utilities | 0.15.0 | indirect |
| PyPI | linear-operator | 0.6 | indirect |
| PyPI | linkify-it-py | 2.0.3 | indirect |
| PyPI | markdown-it-py | 3.0.0 | indirect |
| PyPI | markupsafe | 3.0.2 | indirect |
| PyPI | marshmallow | 3.26.2 | indirect |
| PyPI | matplotlib-inline | 0.1.7 | indirect |
| PyPI | mdit-py-plugins | 0.4.2 | indirect |
| PyPI | mdurl | 0.1.2 | indirect |
| PyPI | mistune | 3.2.0 | indirect |
| PyPI | mizani | 0.14.2 | indirect |
| PyPI | ml-dtypes | 0.5.4 | indirect |
| PyPI | modularcirc | — | indirect |
| PyPI | mpmath | 1.3.0 | indirect |
| PyPI | msgpack | 1.1.2 | indirect |
| PyPI | multiprocess | 0.70.18 | indirect |
| PyPI | mypy-extensions | 1.1.0 | indirect |
| PyPI | myst-nb | 1.3.0 | indirect |
| PyPI | myst-parser | 3.0.1 | indirect |
| PyPI | nbclient | 0.10.2 | indirect |
| PyPI | nbconvert | 7.17.0 | indirect |
| PyPI | nbformat | 5.10.4 | indirect |
| PyPI | nest-asyncio | 1.6.0 | indirect |
| PyPI | networkx | 3.4.2 | indirect |
| PyPI | networkx | 3.5 | indirect |
| PyPI | neuraloperator | 1.0.2 | indirect |
| PyPI | nodeenv | 1.9.1 | indirect |
| PyPI | notebook | 7.4.5 | indirect |
| PyPI | notebook-shim | 0.2.4 | indirect |
| PyPI | numcodecs | 0.13.1 | indirect |
| PyPI | numcodecs | 0.16.1 | indirect |
| PyPI | nvidia-cublas-cu12 | 12.6.4.1 | indirect |
| PyPI | nvidia-cuda-cupti-cu12 | 12.6.80 | indirect |
| PyPI | nvidia-cuda-nvrtc-cu12 | 12.6.85 | indirect |
| PyPI | nvidia-cuda-runtime-cu12 | 12.6.77 | indirect |
| PyPI | nvidia-cudnn-cu12 | 9.10.2.21 | indirect |
| PyPI | nvidia-cufft-cu12 | 11.3.0.4 | indirect |
| PyPI | nvidia-cufile-cu12 | 1.11.1.6 | indirect |
| PyPI | nvidia-curand-cu12 | 10.3.7.77 | indirect |
| PyPI | nvidia-cusolver-cu12 | 11.7.1.2 | indirect |
| PyPI | nvidia-cusparse-cu12 | 12.5.4.2 | indirect |
| PyPI | nvidia-cusparselt-cu12 | 0.7.1 | indirect |
| PyPI | nvidia-nccl-cu12 | 2.28.9 | indirect |
| PyPI | nvidia-nvjitlink-cu12 | 12.6.85 | indirect |
| PyPI | nvidia-nvshmem-cu12 | 3.4.5 | indirect |
| PyPI | nvidia-nvtx-cu12 | 12.6.77 | indirect |
| PyPI | opt-einsum | 3.4.0 | indirect |
| PyPI | optax | 0.2.8 | indirect |
| PyPI | orbax-checkpoint | 0.11.33 | indirect |
| PyPI | orbax-export | 0.0.8 | indirect |
| PyPI | overrides | 7.7.0 | indirect |
| PyPI | packaging | 25.0 | indirect |
| PyPI | pandocfilters | 1.5.1 | indirect |
| PyPI | parso | 0.8.4 | indirect |
| PyPI | pathspec | 0.12.1 | indirect |
| PyPI | patsy | 1.0.1 | indirect |
| PyPI | pexpect | 4.9.0 | indirect |
| PyPI | pillow | 11.3.0 | indirect |
| PyPI | platformdirs | 4.3.8 | indirect |
| PyPI | plotnine | 0.15.0 | indirect |
| PyPI | pluggy | 1.6.0 | indirect |
| PyPI | pre-commit | 4.2.0 | indirect |
| PyPI | prometheus-client | 0.24.1 | indirect |
| PyPI | prompt-toolkit | 3.0.51 | indirect |
| PyPI | protobuf | 6.31.1 | indirect |
| PyPI | psutil | 7.0.0 | indirect |
| PyPI | ptyprocess | 0.7.0 | indirect |
| PyPI | pure-eval | 0.2.3 | indirect |
| PyPI | pybtex | 0.25.1 | indirect |
| PyPI | pybtex-docutils | 1.0.3 | indirect |
| PyPI | pycparser | 2.22 | indirect |
| PyPI | pydantic | 2.11.7 | indirect |
| PyPI | pydantic-core | 2.33.2 | indirect |
| PyPI | pydata-sphinx-theme | 0.15.4 | indirect |
| PyPI | pygments | 2.19.2 | indirect |
| PyPI | pyparsing | 3.2.3 | indirect |
| PyPI | pyright | 1.1.405 | indirect |
| PyPI | pyro-api | 0.1.2 | indirect |
| PyPI | pytest | 8.4.1 | indirect |
| PyPI | pytest-cov | 6.2.1 | indirect |
| PyPI | pytest-mock | 3.14.1 | indirect |
| PyPI | pytest-xdist | 3.8.0 | indirect |
| PyPI | python-dateutil | 2.9.0.post0 | indirect |
| PyPI | python-json-logger | 4.0.0 | indirect |
| PyPI | pytz | 2025.2 | indirect |
| PyPI | pywin32 | 311 | indirect |
| PyPI | pywinpty | 3.0.3 | indirect |
| PyPI | pyyaml | 6.0.2 | indirect |
| PyPI | pyzmq | 27.0.0 | indirect |
| PyPI | referencing | 0.36.2 | indirect |
| PyPI | requests | 2.32.4 | indirect |
| PyPI | rfc3339-validator | 0.1.4 | indirect |
| PyPI | rfc3986-validator | 0.1.1 | indirect |
| PyPI | rfc3987-syntax | 1.1.0 | indirect |
| PyPI | rich | 14.3.3 | indirect |
| PyPI | rpds-py | 0.26.0 | indirect |
| PyPI | ruamel-yaml | 0.18.14 | indirect |
| PyPI | ruamel-yaml-clib | 0.2.12 | indirect |
| PyPI | ruff | 0.12.11 | indirect |
| PyPI | send2trash | 2.1.0 | indirect |
| PyPI | sentry-sdk | 2.34.1 | indirect |
| PyPI | setuptools | 68.0.0 | indirect |
| PyPI | setuptools-scm | 9.2.2 | indirect |
| PyPI | simplejson | 3.20.2 | indirect |
| PyPI | six | 1.17.0 | indirect |
| PyPI | smmap | 5.0.2 | indirect |
| PyPI | snowballstemmer | 3.0.1 | indirect |
| PyPI | soupsieve | 2.7 | indirect |
| PyPI | sphinx | 7.4.7 | indirect |
| PyPI | sphinx-autodoc-typehints | 2.3.0 | indirect |
| PyPI | sphinx-basic-ng | 1.0.0b2 | indirect |
| PyPI | sphinx-book-theme | 1.1.4 | indirect |
| PyPI | sphinx-comments | 0.0.3 | indirect |
| PyPI | sphinx-copybutton | 0.5.2 | indirect |
| PyPI | sphinx-design | 0.6.1 | indirect |
| PyPI | sphinx-external-toc | 1.0.1 | indirect |
| PyPI | sphinx-jupyterbook-latex | 1.0.0 | indirect |
| PyPI | sphinx-multitoc-numbering | 0.1.3 | indirect |
| PyPI | sphinx-thebe | 0.3.1 | indirect |
| PyPI | sphinx-togglebutton | 0.3.2 | indirect |
| PyPI | sphinxcontrib-applehelp | 2.0.0 | indirect |
| PyPI | sphinxcontrib-bibtex | 2.6.5 | indirect |
| PyPI | sphinxcontrib-devhelp | 2.0.0 | indirect |
| PyPI | sphinxcontrib-htmlhelp | 2.1.0 | indirect |
| PyPI | sphinxcontrib-jsmath | 1.0.1 | indirect |
| PyPI | sphinxcontrib-qthelp | 2.0.0 | indirect |
| PyPI | sphinxcontrib-serializinghtml | 2.0.0 | indirect |
| PyPI | sqlalchemy | 2.0.42 | indirect |
| PyPI | stack-data | 0.6.3 | indirect |
| PyPI | statsmodels | 0.14.5 | indirect |
| PyPI | sympy | 1.14.0 | indirect |
| PyPI | tabulate | 0.9.0 | indirect |
| PyPI | tensorflow-probability | 0.25.0 | indirect |
| PyPI | tensorly | 0.9.0 | indirect |
| PyPI | tensorly-torch | 0.5.0 | indirect |
| PyPI | tensorstore | 0.1.78 | indirect |
| PyPI | tensorstore | 0.1.82 | indirect |
| PyPI | terminado | 0.18.1 | indirect |
| PyPI | tfp-nightly | 0.26.0.dev20260325 | indirect |
| PyPI | the-well | 1.1.0 | indirect |
| PyPI | threadpoolctl | 3.6.0 | indirect |
| PyPI | tinycss2 | 1.4.0 | indirect |
| PyPI | tomli | 2.2.1 | indirect |
| PyPI | toolz | 1.1.0 | indirect |
| PyPI | torch-harmonics | 0.7.3 | indirect |
| PyPI | tornado | 6.5.1 | indirect |
| PyPI | traitlets | 5.14.3 | indirect |
| PyPI | treescope | 0.1.10 | indirect |
| PyPI | triton | 3.6.0 | indirect |
| PyPI | typing-extensions | 4.14.1 | indirect |
| PyPI | typing-inspect | 0.9.0 | indirect |
| PyPI | typing-inspection | 0.4.1 | indirect |
| PyPI | tzdata | 2025.2 | indirect |
| PyPI | uc-micro-py | 1.0.3 | indirect |
| PyPI | uri-template | 1.3.0 | indirect |
| PyPI | urllib3 | 2.5.0 | indirect |
| PyPI | uvloop | 0.22.1 | indirect |
| PyPI | virtualenv | 20.32.0 | indirect |
| PyPI | wadler-lindig | 0.1.7 | indirect |
| PyPI | wandb | 0.21.1 | indirect |
| PyPI | wcwidth | 0.2.13 | indirect |
| PyPI | webcolors | 25.10.0 | indirect |
| PyPI | webencodings | 0.5.1 | indirect |
| PyPI | websocket-client | 1.9.0 | indirect |
| PyPI | wheel | 0.41.0 | indirect |
| PyPI | widgetsnbextension | 4.0.14 | indirect |
| PyPI | wrapt | 2.1.2 | indirect |
| PyPI | xarray | 2025.6.1 | indirect |
| PyPI | xarray | 2025.7.1 | indirect |
| PyPI | xarray-einstats | 0.8.0 | indirect |
| PyPI | xarray-einstats | 0.9.1 | indirect |
| PyPI | zarr | 2.18.3 | indirect |
| PyPI | zarr | 3.1.1 | indirect |
| PyPI | zipp | 3.23.0 | indirect |
Dependency advisories 2
Installing pypi:autoemulate@2.1.2 pulls in 172 packages, direct and transitive: 2 carry known advisories, of which 0 are direct dependencies.
| Package | Version | Relation | Severity | Advisories | Fixed in |
|---|---|---|---|---|---|
| setuptools | 68.0.0 | indirect | high | 6 | 83.0.0 |
| wheel | 0.41.0 | indirect | high | 2 | 0.46.2 |
An advisory means the version recorded in the dependency graph falls inside an advisory’s affected range. Reachability is not analysed, and the graph includes development and test pins — a finding may concern tooling rather than shipped software.
Raw JSON report machine-readable
{
"data": {
"repo": {
"topics": [
"hut23",
"hut23-1468",
"emulation",
"pytorch",
"active-learning",
"calibration",
"gaussian-processes",
"mcmc",
"sensitivity-analysis",
"uncertainty-quantification",
"ensemble",
"history-matching",
"neural-networks",
"aiphys"
],
"is_fork": false,
"size_kb": 325004,
"has_wiki": true,
"homepage": null,
"languages": {
"Python": 916091,
"Jupyter Notebook": 559578
},
"pushed_at": "2026-07-25T23:20:14Z",
"created_at": "2023-08-01T13:06:39Z",
"owner_type": "Organization",
"updated_at": "2026-07-24T19:40:45Z",
"description": "Emulate simulations easily",
"is_archived": false,
"is_disabled": false,
"license_spdx": "MIT",
"default_branch": "main",
"license_spdx_raw": "MIT",
"primary_language": "Python",
"significant_languages": [
"Python",
"Jupyter Notebook"
]
},
"owner": {
"blog": "https://turing.ac.uk",
"name": "The Alan Turing Institute",
"type": "Organization",
"login": "alan-turing-institute",
"company": null,
"location": null,
"followers": 1007,
"avatar_url": "https://avatars.githubusercontent.com/u/18304793?v=4",
"created_at": "2016-04-06T09:38:19Z",
"is_verified": null,
"public_repos": 657,
"account_age_days": 3762
},
"license": {
"state": "standard",
"spdx_id": "MIT",
"raw_spdx": "MIT",
"file_present": true,
"scorecard_found": true,
"profile_has_license": true
},
"activity": {
"releases": [
{
"tag": "v2.1.2",
"kind": "patch",
"published_at": "2026-07-07T09:25:05Z"
},
{
"tag": "v2.1.1",
"kind": "patch",
"published_at": "2026-05-12T19:46:20Z"
},
{
"tag": "v2.1.0",
"kind": "minor",
"published_at": "2026-05-12T16:22:54Z"
},
{
"tag": "v2.0.0",
"kind": "major",
"published_at": "2026-01-14T13:47:34Z"
},
{
"tag": "v1.2.1",
"kind": "patch",
"published_at": "2025-12-15T13:12:20Z"
},
{
"tag": "v1.2.0",
"kind": "minor",
"published_at": "2025-10-16T09:21:53Z"
},
{
"tag": "v1.1.1",
"kind": "patch",
"published_at": "2025-09-25T15:07:50Z"
},
{
"tag": "v1.1.0",
"kind": "minor",
"published_at": "2025-09-04T13:34:15Z"
},
{
"tag": "v1.0.0",
"kind": "major",
"published_at": "2025-07-31T10:41:36Z"
},
{
"tag": "v0.4.0",
"kind": "minor",
"published_at": "2025-06-25T14:50:24Z"
},
{
"tag": "v0.3.3",
"kind": "patch",
"published_at": "2025-06-13T13:42:57Z"
},
{
"tag": "v0.3.2",
"kind": "patch",
"published_at": "2025-06-06T14:53:05Z"
},
{
"tag": "v0.3.1",
"kind": "patch",
"published_at": "2025-06-04T08:46:22Z"
},
{
"tag": "v0.3.0",
"kind": "minor",
"published_at": "2025-04-29T15:02:54Z"
},
{
"tag": "v0.2.1",
"kind": "patch",
"published_at": "2025-01-30T16:27:13Z"
},
{
"tag": "v0.2.0",
"kind": "minor",
"published_at": "2024-11-27T17:08:42Z"
},
{
"tag": "v0.1.0.post1",
"kind": "other",
"published_at": "2024-04-02T16:15:54Z"
}
],
"recent_commits": [
{
"oid": "0168b27d4f13bc625a37a67ccc98b47366e1e61d",
"body": "…add-hebatea\n\ndocs: add hebatea as a contributor for code",
"is_bot": false,
"headline": "Merge pull request #1030 from alan-turing-institute/all-contributors/…",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-07-14T09:56:10Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "7b9e6851c6d8fef13ac2a995ba9496c29f3d4a78",
"body": null,
"is_bot": true,
"headline": "docs: update .all-contributorsrc",
"author_name": "allcontributors[bot]",
"author_login": "allcontributors[bot]",
"committed_at": "2026-07-14T09:54:42Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "9a51ef1898c6e5ac2c5aa52657b0bcd8270527e0",
"body": null,
"is_bot": true,
"headline": "docs: update README.md",
"author_name": "allcontributors[bot]",
"author_login": "allcontributors[bot]",
"committed_at": "2026-07-14T09:54:41Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "097a4b802395e677874a486ee3302fd504407590",
"body": "Fix #928: Replace ±2σ with 95% predictive intervals in plots",
"is_bot": false,
"headline": "Merge pull request #1029 from hebatea/fix/issue-928-predictive-intervals",
"author_name": "Penelope Yong",
"author_login": "penelopeysm",
"committed_at": "2026-07-13T13:58:48Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "2fd95b9f0cd7459290cc16e269ba042f101c9f0b",
"body": null,
"is_bot": false,
"headline": "Use norm.ppf(0.975) instead of hardcoded 1.96 for PREDICTION_INTERVAL_Z",
"author_name": "hebatea",
"author_login": "hebatea",
"committed_at": "2026-07-12T18:46:34Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "8b159a3d503356995d99c1378983962fff09c8bc",
"body": null,
"is_bot": false,
"headline": "Fix pre-commit ruff and pyright failures",
"author_name": "hebatea",
"author_login": "hebatea",
"committed_at": "2026-07-07T10:46:16Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "1de502d6766179776c469518f67a4e00a90dd8a5",
"body": "update version to 2.1.2",
"is_bot": false,
"headline": "Merge pull request #1028 from alan-turing-institute/v212",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-07-07T09:22:23Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "5d24976330596e6fbaf02ce4853aadd03039d381",
"body": null,
"is_bot": false,
"headline": "Add tests for 95% predictive interval width and constant value",
"author_name": "hebatea",
"author_login": "hebatea",
"committed_at": "2026-07-07T02:56:13Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "ca6b6ae4cf1301c9739e02f905b16dd109175a76",
"body": null,
"is_bot": false,
"headline": "Update docstrings to mention 95% predictive interval",
"author_name": "hebatea",
"author_login": "hebatea",
"committed_at": "2026-07-07T02:56:13Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "1d528b7a77769012f7754c3a063495c2b9243d06",
"body": "- Add PREDICTION_INTERVAL_Z = 1.96 constant to plotting.py and v0/plotting.py\n- Replace hardcoded 2 * y_std with PREDICTION_INTERVAL_Z * y_std in plot_xy (bars and fill), plot_parity, and _plot_Xy\n- Update labels from ±2σ to 95% PI throughout\n- Import PREDICTION_INTERVAL_Z in compare.py so future coverage changes are a single-line edit\n\nCloses #928",
"is_bot": false,
"headline": "Replace ±2σ with 95% predictive intervals in plots",
"author_name": "hebatea",
"author_login": "hebatea",
"committed_at": "2026-07-07T02:56:13Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "344e4502f472acb2efc585de258c331e27e7fe43",
"body": null,
"is_bot": false,
"headline": "update version to 2.1.2",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-07-06T10:27:02Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "7f9f436af93e42ef92e2c158f49a46f2d7b043a8",
"body": "…add-ykd007\n\ndocs: add ykd007 as a contributor for doc",
"is_bot": false,
"headline": "Merge pull request #1027 from alan-turing-institute/all-contributors/…",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-07-03T18:45:46Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "e16a6f68742bcbd5519bf3aa1e2cba8fb69ef5f8",
"body": "docs: add AGENTS.md with build, test, and contribution guide",
"is_bot": false,
"headline": "Merge pull request #1005 from ykd007/add-agents-md",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-07-03T18:45:07Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "06a2644cefedfe44bd3782b3e845ab1cdfa443e1",
"body": null,
"is_bot": true,
"headline": "docs: update .all-contributorsrc",
"author_name": "allcontributors[bot]",
"author_login": "allcontributors[bot]",
"committed_at": "2026-07-03T18:43:41Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "3418202b936960df5139206ee92d19259880b352",
"body": null,
"is_bot": true,
"headline": "docs: update README.md",
"author_name": "allcontributors[bot]",
"author_login": "allcontributors[bot]",
"committed_at": "2026-07-03T18:43:41Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "4bbed1c29df4ba02381ece47633d2568c350927d",
"body": null,
"is_bot": false,
"headline": "docs: address contributor guide feedback",
"author_name": "Yash Dhawan",
"author_login": "ykd007",
"committed_at": "2026-07-03T17:34:11Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "6bcecf0fddf73fbca6ab7cb6cbe5a0ddf2d01a49",
"body": "Remove dead code",
"is_bot": false,
"headline": "Merge pull request #1025 from alan-turing-institute/iss1016_rm_dead_code",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-07-03T09:57:55Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "bd008896315a7fde3bc60a22fc7be4b4fcf8e42e",
"body": "rm benchmarks dir",
"is_bot": false,
"headline": "Merge pull request #1024 from alan-turing-institute/rm_benchmarks",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-07-02T11:06:03Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "6fcddb21b07929ebc491ac338bc06fbdfd1a9c81",
"body": null,
"is_bot": false,
"headline": "rm outdated comments from learners",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-07-02T10:38:28Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "c755910a0782978e9825bad8fd3a9c3094da4e8c",
"body": "related to iss 536 which has been closed as not planned",
"is_bot": false,
"headline": "rm outdated comments in transforms",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-07-02T10:37:15Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "21e3ee47dcc23252108bb008b95496b65aa6b95e",
"body": null,
"is_bot": false,
"headline": "rm CNPs from experimental",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-07-02T10:28:11Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "b0eaef4b0b3188d91be525b873d93383c6fd00e1",
"body": null,
"is_bot": false,
"headline": "rm FNO experiments applied to AD and RD data",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-07-02T10:21:03Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "2fa380e27229dffc1e3f0a141e7c0db01a072d4d",
"body": null,
"is_bot": false,
"headline": "rm experimental spatiotemporal data+emulator",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-07-02T10:19:31Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "ffdf32692d663bdcc398e23e3b4ee4b06c7b7202",
"body": null,
"is_bot": false,
"headline": "rm experimental FNO",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-07-02T10:18:27Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "c920b23a8d83d52722c66a3fe971d7ad0802e7ec",
"body": null,
"is_bot": false,
"headline": "rm the well experiments",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-07-02T10:16:46Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "7193de03634c26433cc0b80a82a3f61e0fe62615",
"body": null,
"is_bot": false,
"headline": "rm v0 code and docs",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-07-02T10:12:26Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "2e46a8293aab29cca3991562cb1b76a0ec56de67",
"body": null,
"is_bot": false,
"headline": "rm benchmarks dir",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-07-02T10:09:48Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a0ce16db853eda48c19e4dad9f5b5333b4901105",
"body": "Add FESTIM links to case studies",
"is_bot": false,
"headline": "Merge pull request #1022 from alan-turing-institute/festim",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-06-19T13:02:23Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a73df398ce2c0087aaf107c84baf6807cefc8652",
"body": "Co-authored-by: Penelope Yong <penelopeysm@gmail.com>",
"is_bot": false,
"headline": "Update case_studies/README.md",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-06-19T08:41:50Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "7ef525cfa21e8cee0490c312c456d307eb5359db",
"body": "…add-RemDelaporteMathurin\n\ndocs: add RemDelaporteMathurin as a contributor for doc",
"is_bot": false,
"headline": "Merge pull request #1023 from alan-turing-institute/all-contributors/…",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-06-18T15:15:17Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a62c573f1f19eed8647092a5c61ca924ccd6c1d0",
"body": null,
"is_bot": true,
"headline": "docs: update .all-contributorsrc",
"author_name": "allcontributors[bot]",
"author_login": "allcontributors[bot]",
"committed_at": "2026-06-18T15:14:36Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "7c19c6e6c10c2ef7727a9ab74e02d3f53813db33",
"body": null,
"is_bot": true,
"headline": "docs: update README.md",
"author_name": "allcontributors[bot]",
"author_login": "allcontributors[bot]",
"committed_at": "2026-06-18T15:14:35Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "768010bcf94ea7e8c058828868af8fdc253f5941",
"body": null,
"is_bot": false,
"headline": "add FESTIM example links to case studies",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-06-18T10:06:32Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "045ada8129b040148106ed0c0b1ad4181288b9dd",
"body": "…add-z7076\n\ndocs: add z7076 as a contributor for doc",
"is_bot": false,
"headline": "Merge pull request #1021 from alan-turing-institute/all-contributors/…",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-06-18T09:34:10Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "41f569b747f1bf690359428ba9043d56e904c43e",
"body": null,
"is_bot": true,
"headline": "docs: update .all-contributorsrc",
"author_name": "allcontributors[bot]",
"author_login": "allcontributors[bot]",
"committed_at": "2026-06-18T09:33:02Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "08d039af144ffc24f2ee9e98b123e315f8ec7ded",
"body": null,
"is_bot": true,
"headline": "docs: update README.md",
"author_name": "allcontributors[bot]",
"author_login": "allcontributors[bot]",
"committed_at": "2026-06-18T09:33:01Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "5f064255c62b477570ec07b9c9390ec6a8175b9c",
"body": "…add-SyedHaider2084\n\ndocs: add SyedHaider2084 as a contributor for doc",
"is_bot": false,
"headline": "Merge pull request #1020 from alan-turing-institute/all-contributors/…",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-06-18T09:32:19Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "b2c418d989f93d5662ae792a1f3ad7f990b70210",
"body": null,
"is_bot": true,
"headline": "docs: update .all-contributorsrc",
"author_name": "allcontributors[bot]",
"author_login": "allcontributors[bot]",
"committed_at": "2026-06-18T09:31:31Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "009900ecc5e5573b275119c369300beca126bb94",
"body": null,
"is_bot": true,
"headline": "docs: update README.md",
"author_name": "allcontributors[bot]",
"author_login": "allcontributors[bot]",
"committed_at": "2026-06-18T09:31:30Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "c21d8b1ba8e661e44a2e89e3571352d3a366d03e",
"body": "Update pueue instructions",
"is_bot": false,
"headline": "Merge pull request #1018 from alan-turing-institute/update_instructions",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-06-10T09:52:10Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "62ecf550b2684ec3cbb7d823398eeb6d8cdbd127",
"body": "Co-authored-by: Sam Greenbury <50113363+sgreenbury@users.noreply.github.com>",
"is_bot": false,
"headline": "Update benchmarks/README.md",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-06-10T09:51:38Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "870a2bdf53697adc0fec46d466ab1084d3a7abe8",
"body": null,
"is_bot": false,
"headline": "update pueue instructions",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-06-09T11:37:29Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "324eea45d61c2859767540c89634a25edbdbbed6",
"body": "…tructions\n\nFix pueue instruction",
"is_bot": false,
"headline": "Merge pull request #1017 from alan-turing-institute/fix_benchmark_ins…",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-06-08T16:19:15Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a14c35e6d59cbc648f5084c77304d520fe232bcc",
"body": null,
"is_bot": false,
"headline": "fix pueue instruction",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-06-08T15:55:01Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a1eb26214ddf5b20d63108bf5d51e78a5d461ffe",
"body": "…structions\n\nRm version number from pip install instructions",
"is_bot": false,
"headline": "Merge pull request #1015 from alan-turing-institute/update_install_in…",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-06-05T16:46:07Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a967e922b602b09d94a548fc3651674b783def8e",
"body": null,
"is_bot": false,
"headline": "rm version number from pip install instractions",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-06-05T16:37:01Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "f9981b6828de36e0a53dedb419c601d1feb64c31",
"body": "Update email",
"is_bot": false,
"headline": "Merge pull request #1009 from alan-turing-institute/update_email",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-05-18T10:43:50Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a2f7fcd712190a8c03ddfe8ad01503569cabb846",
"body": "Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>",
"is_bot": false,
"headline": "Add missing trailing period in bullet point.",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-05-18T10:43:07Z",
"body_truncated": false,
"is_coding_agent": true
},
{
"oid": "e71bcce53b40b90c4b4e1043b22cdb6a1902f48d",
"body": null,
"is_bot": false,
"headline": "update group email",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-05-18T10:38:29Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "dc3bac2bbe8c44d2fc144b860b0b017beede41b0",
"body": "Bump sklearn compat",
"is_bot": false,
"headline": "Merge pull request #1006 from penelopeysm/py/sklearn",
"author_name": "Penelope Yong",
"author_login": "penelopeysm",
"committed_at": "2026-05-14T19:10:24Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "b89c25fd12b8df84f6ae011bed2f5f4d5911b40a",
"body": null,
"is_bot": false,
"headline": "Suppress lightgbm warning",
"author_name": "Penelope Yong",
"author_login": "penelopeysm",
"committed_at": "2026-05-14T16:45:30Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "726ebbc26f6c09fe7d6f8fb8ca33c4a35fba342d",
"body": null,
"is_bot": false,
"headline": "Unbump patch in lockfile",
"author_name": "Penelope Yong",
"author_login": "penelopeysm",
"committed_at": "2026-05-14T16:21:34Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "747a1a5ae34de313f84303ffe1244973e091ed19",
"body": "Co-authored-by: Sam Greenbury <50113363+sgreenbury@users.noreply.github.com>",
"is_bot": false,
"headline": "Don't bump patch",
"author_name": "Penelope Yong",
"author_login": "penelopeysm",
"committed_at": "2026-05-14T16:03:50Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "7c714ca292f32565d2dbb00e88d3973d3b3a1754",
"body": null,
"is_bot": false,
"headline": "Only upgrade sklearn in lockfile",
"author_name": "Penelope Yong",
"author_login": "penelopeysm",
"committed_at": "2026-05-14T13:53:02Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a4e5b92c7a743717f997e4a117524e2354daa0b5",
"body": null,
"is_bot": false,
"headline": "pin arviz<1",
"author_name": "Penelope Yong",
"author_login": "penelopeysm",
"committed_at": "2026-05-14T13:11:45Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "9e3df853fbc6d6add4946fdd275b7033e1db6d74",
"body": null,
"is_bot": false,
"headline": "Bump patch",
"author_name": "Penelope Yong",
"author_login": "penelopeysm",
"committed_at": "2026-05-14T12:43:23Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "e397e149bf9ae962800f8dc59e74bd40ea14e002",
"body": null,
"is_bot": false,
"headline": "Remove sklearn upper bound, upgrade deps",
"author_name": "Penelope Yong",
"author_login": "penelopeysm",
"committed_at": "2026-05-14T12:41:27Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "b9f052a7fe5396444af367772fc5d9b72840f0fa",
"body": "Adds an AGENTS.md file as requested in issue #968. Covers:\n- uv-based environment setup\n- how to run tests (including Apple Silicon MPS workaround)\n- code style and pre-commit hooks\n- repo structure overview\n- guide for adding new emulators\n- docstring conventions and PR checklist\n\nCloses #968",
"is_bot": false,
"headline": "docs: add AGENTS.md with build, test, and contribution guide",
"author_name": "Yash",
"author_login": null,
"committed_at": "2026-05-13T13:32:58Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "87f3a4bd558fcfc6f669a5732b5a05c9c77540e2",
"body": "Bump to v2.1.1",
"is_bot": false,
"headline": "Merge pull request #1003 from alan-turing-institute/update-to-v2.1.1",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T19:45:34Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "0edb4c51745d4abbc5ea6d6f2c770d9c86159dbc",
"body": "…-docs\n\nUpdate benchmarks README",
"is_bot": false,
"headline": "Merge pull request #1004 from alan-turing-institute/update-benchmarks…",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T19:43:57Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a43c6c7d04610932b9292ab923822ca8a3b6e895",
"body": null,
"is_bot": false,
"headline": "Update benchmarks README",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T19:31:43Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "39a45549c67b9b1ad1ab07f1ea86b2732e5657f1",
"body": null,
"is_bot": false,
"headline": "Bump to v2.1.1",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T18:39:41Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "a7ffb81f19939c32288e96fc88be46d9d34acca2",
"body": "…-progress\n\nFix notebook `show_progress_bar=False`",
"is_bot": false,
"headline": "Merge pull request #1002 from alan-turing-institute/fix-notebook-show…",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T18:38:28Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "5eacfb9b281bd3e66b67be64c01ebed3bcaae15f",
"body": null,
"is_bot": false,
"headline": "Add `show_progress_bar=False` for notebooks",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T18:36:58Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "af588be7e3b7c82d79a5692755adac10e066ee7c",
"body": "Fix docstrings",
"is_bot": false,
"headline": "Merge pull request #1001 from alan-turing-institute/fix-docstrings",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T18:36:36Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "093ab0168393f65c03b77d47477ad09779e9f238",
"body": null,
"is_bot": false,
"headline": "Fix docstring misalignment",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T18:35:53Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "9b7a88d4ef4d17fc501e9999f96ddfce9464ed7b",
"body": "…-and-new-warnings\n\nFix failing test and new warnings (#978)",
"is_bot": false,
"headline": "Merge pull request #1000 from alan-turing-institute/fix-failing-tests…",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T18:35:06Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "5dabe771fa7a2aff06f8e3aac246fd070b24273f",
"body": null,
"is_bot": false,
"headline": "Fix warnings raised in CI",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T18:20:22Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "79eafe326bdb97bf99c719a82dcb1e6ba1866459",
"body": null,
"is_bot": false,
"headline": "Remove deprecated kwarg",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T17:24:51Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "2d73ca4403780783fe92e8b15b976ca0e0cae832",
"body": null,
"is_bot": false,
"headline": "Fix dup in docstring",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T17:15:51Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "1394b4ce26b664a0fa700a25dea5d79739da13e6",
"body": "Bump to v2.1.0",
"is_bot": false,
"headline": "Merge pull request #999 from alan-turing-institute/update-to-v2.1.0",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T16:21:17Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "d750be84effa4dc350b4e88d9e2f720cc3e519f3",
"body": "Update the IES formulation",
"is_bot": false,
"headline": "Merge pull request #998 from alan-turing-institute/fix-eq-notebook",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T16:18:48Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "46559972a0e7eeea471f212dd139a4d291b0a0ae",
"body": null,
"is_bot": false,
"headline": "Bump to v2.1.0",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T16:16:15Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "f0c55fada58463ce68142f5dad9369e39ef862e7",
"body": "- Add support for multidimensional case\n- Clarify example demonstrated compared with API support",
"is_bot": false,
"headline": "Update the IES formulation",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T16:15:07Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "8ec7b8ebae9bf750b02024ec994107015c5c5144",
"body": "Remove warning suppression from docs (#978)",
"is_bot": false,
"headline": "Merge pull request #997 from alan-turing-institute/remove-warnings-nb",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T16:06:55Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "7fb427f55412680c21adb51ccb4f8cb73ee180c4",
"body": null,
"is_bot": false,
"headline": "Remove warning suppression from tutorial",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T15:38:45Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "89e78cb0557a71c27106c6d90363a78c8e91a574",
"body": null,
"is_bot": false,
"headline": "Remove warning suppression from notebooks",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T15:38:24Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "dc626f7f6d24647441c2f5e2c0db9c77b3fd30b6",
"body": "Refactor logging",
"is_bot": false,
"headline": "Merge pull request #988 from alan-turing-institute/logging_refactor",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-05-12T15:06:27Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "dcc1465fe7022dbcbb2e01e2f7a0adfa34aaf550",
"body": "…-arg\n\nFix deterministic argument order",
"is_bot": false,
"headline": "Merge pull request #996 from alan-turing-institute/move-deterministic…",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-05-12T15:06:01Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "ae29979a46378db83bdfd234b7800301bf9778b2",
"body": "Move deterministic to the end of affected public signatures so existing\npositional callers keep their previous argument binding.\n\nKeep keyword behavior unchanged while preserving deterministic seed\nhandling across comparison, simulation, tuning, transform, and emulator\npaths.",
"is_bot": false,
"headline": "Fix deterministic argument order",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T12:54:47Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "0094da54a240f5d6979d18a80b80972820bb1dcd",
"body": "…dd-penelopeysm\n\ndocs: add penelopeysm as a contributor for ideas, review, and 2 more",
"is_bot": false,
"headline": "Merge pull request #995 from alan-turing-institute/all-contributors/a…",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-05-12T12:28:38Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "3bc15dc5f63c677549ede56b156c8e9565fd1d70",
"body": null,
"is_bot": true,
"headline": "docs: update .all-contributorsrc",
"author_name": "allcontributors[bot]",
"author_login": "allcontributors[bot]",
"committed_at": "2026-05-12T12:28:02Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "1583d18f51ee2f42837c897b200b64fe73faab41",
"body": null,
"is_bot": true,
"headline": "docs: update README.md",
"author_name": "allcontributors[bot]",
"author_login": "allcontributors[bot]",
"committed_at": "2026-05-12T12:28:01Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "642f9d150563fef4e1b3d96b7a077a5b24e6d225",
"body": null,
"is_bot": false,
"headline": "refactor so that each calibration submodule has its own logger",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-05-12T12:12:27Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "07751a1cbc1a1517849aad174faba6e51758ebfc",
"body": null,
"is_bot": false,
"headline": "fix ruff error after main merge",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-05-12T12:08:42Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "542df8155a4e723221801f3a47e8fb1f2a836dea",
"body": null,
"is_bot": false,
"headline": "Merge branch 'main' into logging_refactor",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-05-12T12:07:37Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "43fee854f37968e33b7ee882e2716966716696a0",
"body": "rm try/except from DoublePendulum._forward, this is handled in Simulator.forward",
"is_bot": false,
"headline": "update Simulator to not save logger",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-05-12T11:11:35Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "7fdf814634dea1d87f5ae73ac9eab02cb15967c3",
"body": "Fix slow calibration tests",
"is_bot": false,
"headline": "Merge pull request #993 from alan-turing-institute/fix-slow-tests",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T11:03:41Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "d936823e973288b3241adc9d33456e80cb57c31c",
"body": "Fix warnings in tests and revise `make_positive_definite` (#978)",
"is_bot": false,
"headline": "Merge pull request #990 from alan-turing-institute/fix-warnings",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T11:02:48Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "7f0f0aea9122473113162a636cfe1ed2eed58997",
"body": null,
"is_bot": false,
"headline": "rm unnecessary call to setup_library_logger",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-05-12T10:53:58Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "e8c3cb28a35f015319f9c5e489a3ceec781b762e",
"body": null,
"is_bot": false,
"headline": "add pyright ignore in test",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-05-12T10:51:09Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "12dede355a53715d259f1c792aef30f247ab4875",
"body": null,
"is_bot": false,
"headline": "make show_progress_bar not optional",
"author_name": "radka-j",
"author_login": "radka-j",
"committed_at": "2026-05-12T10:49:58Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "03086cd6404415c05dd34a1e8e1bfd1ebebabf43",
"body": "Fix library logging compatibility",
"is_bot": false,
"headline": "Merge pull request #994 from alan-turing-institute/logging_refactor_pr",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-05-12T10:30:34Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "19e3a6d88d25d8a9740a9418dd58735cf0c7bfc8",
"body": "Keep autoemulate library logging handler-safe by retaining only the\npackage NullHandler and moving remaining root logger calls to library\nloggers or warnings.\n\nRestore the deprecated log_level constructor argument so existing\ncallers keep working while directing users to configure logging in\ntheir application and use show_progress_bar for progress output.",
"is_bot": false,
"headline": "Fix library logging compatibility",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T10:25:50Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "cf19940732c5291c28c2120d723587de3d023ff9",
"body": "Reuse small emulator fixtures and deterministic evidence samples so\ntests stay focused on API contracts, tensor shapes, and error handling.\nKeep one real calibration integration path while reducing MCMC settings\nto avoid CI warnings and long runtimes.",
"is_bot": false,
"headline": "Fix slow calibration tests",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T09:42:55Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "e02159284dbbc0e62334e35526c93e29b4c50914",
"body": "Co-authored-by: Penelope Yong <penelopeysm@gmail.com>",
"is_bot": false,
"headline": "Update autoemulate/core/logging_config.py",
"author_name": "Radka Jersakova",
"author_login": "radka-j",
"committed_at": "2026-05-12T09:29:51Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "3f85948d1b84f33931491638d7bb1c03cfdf5095",
"body": "Extract transformed full-covariance PSD warning handling into\nshared test utilities so transformed and gradient tests use the\nsame logic.\n\nThis reduces duplication and keeps warning expectations scoped to\nthe tests that exercise PCA or VAE inverse covariance repairs.",
"is_bot": false,
"headline": "Refactor PSD warning test helpers",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T08:20:48Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "06b29a1e876dcbcf323dac6745a061fa04f12e7e",
"body": null,
"is_bot": false,
"headline": "Add ignore for MPS test warnings",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-12T08:18:47Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "3c4829d1fb6c2720609c7ca584beecbec6c6b2c2",
"body": "Silence only routine baseline jitter repairs when covariance\nmatrices are made positive definite. Keep material jitter and\neigenvalue clamping warnings visible so users still see repairs\nthat can affect uncertainty estimates or gradients.\n\nMove expected transformed-emulator PSD repairs into local test\nfilters and remove the global pytest filter.",
"is_bot": false,
"headline": "Fix PSD warning handling",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-11T21:48:05Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "c164263ddaf150f53ec557b127a79ffbf5a0d294",
"body": null,
"is_bot": false,
"headline": "Add comments",
"author_name": "Sam Greenbury",
"author_login": "sgreenbury",
"committed_at": "2026-05-11T17:59:36Z",
"body_truncated": false,
"is_coding_agent": false
}
],
"releases_count": 17,
"commits_last_year": 1306,
"latest_release_at": "2026-07-07T09:25:05Z",
"latest_release_tag": "v2.1.2",
"releases_from_tags": false,
"days_since_last_push": 0,
"active_weeks_last_year": 37,
"days_since_latest_release": 18,
"mean_days_between_releases": 41.9
},
"community": {
"has_readme": true,
"has_license": true,
"has_description": true,
"has_contributing": true,
"health_percentage": 75,
"has_issue_template": false,
"has_code_of_conduct": true,
"has_pull_request_template": false
},
"ecosystem": {
"packages": [
{
"name": "autoemulate",
"exists": true,
"license": "MIT",
"keywords": [
"Development Status :: 5 - Production/Stable",
"Intended Audience :: Science/Research",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12",
"Topic :: Scientific/Engineering"
],
"ecosystem": "pypi",
"matches_repo": true,
"registry_url": "https://pypi.org/project/autoemulate/",
"is_deprecated": false,
"latest_version": "2.1.2",
"repository_url": "https://github.com/alan-turing-institute/autoemulate",
"versions_count": 18,
"total_downloads": null,
"dependents_count": null,
"deprecation_note": null,
"maintainers_count": null,
"monthly_downloads": null,
"first_published_at": "2024-04-02T15:30:25.138950Z",
"latest_published_at": "2026-07-06T10:28:40.686229Z",
"latest_version_yanked": null,
"days_since_latest_publish": 19
}
]
},
"popularity": {
"forks": 42,
"stars": 118,
"watchers": 5,
"fork_history": {
"days": [
{
"date": "2024-02-27",
"count": 1
},
{
"date": "2024-09-03",
"count": 1
},
{
"date": "2024-11-06",
"count": 1
},
{
"date": "2025-01-13",
"count": 1
},
{
"date": "2025-02-12",
"count": 1
},
{
"date": "2025-02-19",
"count": 1
},
{
"date": "2025-02-27",
"count": 1
},
{
"date": "2025-06-02",
"count": 1
},
{
"date": "2025-06-03",
"count": 1
},
{
"date": "2025-06-16",
"count": 1
},
{
"date": "2025-08-01",
"count": 1
},
{
"date": "2025-08-02",
"count": 2
},
{
"date": "2025-08-26",
"count": 1
},
{
"date": "2025-09-03",
"count": 1
},
{
"date": "2025-09-16",
"count": 1
},
{
"date": "2025-09-21",
"count": 1
},
{
"date": "2025-10-03",
"count": 1
},
{
"date": "2025-10-29",
"count": 1
},
{
"date": "2025-11-05",
"count": 2
},
{
"date": "2025-11-19",
"count": 1
},
{
"date": "2025-11-21",
"count": 1
},
{
"date": "2025-12-04",
"count": 1
},
{
"date": "2025-12-17",
"count": 1
},
{
"date": "2026-01-07",
"count": 1
},
{
"date": "2026-03-05",
"count": 1
},
{
"date": "2026-03-08",
"count": 1
},
{
"date": "2026-03-27",
"count": 2
},
{
"date": "2026-04-05",
"count": 1
},
{
"date": "2026-04-10",
"count": 1
},
{
"date": "2026-04-14",
"count": 1
},
{
"date": "2026-04-21",
"count": 1
},
{
"date": "2026-04-25",
"count": 2
},
{
"date": "2026-04-29",
"count": 1
},
{
"date": "2026-04-30",
"count": 1
},
{
"date": "2026-05-02",
"count": 1
},
{
"date": "2026-05-13",
"count": 1
},
{
"date": "2026-06-03",
"count": 1
},
{
"date": "2026-07-07",
"count": 1
}
],
"complete": true,
"collected": 42,
"total_forks": 42
},
"star_history": null,
"open_issues_and_prs": 67
},
"ai_readiness": {
"has_nix": false,
"example_dirs": [
"notebooks"
],
"has_llms_txt": false,
"has_dockerfile": false,
"has_mcp_signal": false,
"bootstrap_files": [],
"api_schema_files": [],
"has_devcontainer": false,
"typecheck_configs": [],
"toolchain_manifests": [],
"largest_source_bytes": 50214,
"source_files_sampled": 113,
"oversized_source_files": 0,
"agent_instruction_files": [
"AGENTS.md"
],
"agent_instruction_max_bytes": 4030
},
"dependencies": {
"manifests": [
"pyproject.toml"
],
"advisories": {
"error": null,
"scope": "published_package",
"source": "osv",
"findings": [
{
"name": "setuptools",
"direct": false,
"version": "68.0.0",
"severity": "high",
"ecosystem": "pypi",
"cvss_score": 8.8,
"advisory_ids": [
"GHSA-5rjg-fvgr-3xxf",
"GHSA-cx63-2mw6-8hw5",
"GHSA-h35f-9h28-mq5c",
"PYSEC-2025-49",
"PYSEC-2026-1918",
"PYSEC-2026-3447"
],
"fixed_version": "83.0.0",
"advisory_count": 6,
"oldest_advisory_days": 741
},
{
"name": "wheel",
"direct": false,
"version": "0.41.0",
"severity": "high",
"ecosystem": "pypi",
"cvss_score": 7.1,
"advisory_ids": [
"GHSA-8rrh-rw8j-w5fx",
"PYSEC-2026-2047"
],
"fixed_version": "0.46.2",
"advisory_count": 2,
"oldest_advisory_days": 184
}
],
"collected": true,
"malicious": [],
"truncated": false,
"by_severity": {
"high": 2
},
"advisory_count": 8,
"affected_count": 2,
"assessed_count": 172,
"malicious_count": 0,
"assessed_package": "pypi:autoemulate@2.1.2",
"unassessed_count": 0,
"direct_affected_count": 0
},
"ecosystems": [
"pypi"
],
"dependencies": [
{
"name": "matplotlib",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=3.7.2"
},
{
"name": "seaborn",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=0.12.2"
},
{
"name": "scikit-learn",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=1.3.0"
},
{
"name": "pandas",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=2.1"
},
{
"name": "torch",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=2.1.0"
},
{
"name": "scipy",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=1.11.3"
},
{
"name": "numpy",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=1.24"
},
{
"name": "joblib",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=1.3.2"
},
{
"name": "tqdm",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=4.66.2"
},
{
"name": "lightgbm",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=4.3.0"
},
{
"name": "ipywidgets",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=8.1.2"
},
{
"name": "gpytorch",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=1.12"
},
{
"name": "salib",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=1.5.1"
},
{
"name": "torcheval",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=0.0.7"
},
{
"name": "anytree",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=2.12.1"
},
{
"name": "torchmetrics",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=1.7.1"
},
{
"name": "pyro-ppl",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=1.9.1"
},
{
"name": "torchrbf",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=0.0.1"
},
{
"name": "arviz",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=0.21.0,<1.0"
},
{
"name": "getdist",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=1.7.2"
},
{
"name": "einops",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=0.8.1"
},
{
"name": "harmonic",
"manifest": "pyproject.toml",
"ecosystem": "pypi",
"version_constraint": ">=1.3.0"
}
],
"all_dependencies": {
"error": null,
"source": "github-sbom",
"packages": [
{
"name": "anytree",
"direct": true,
"version": "2.13.0",
"ecosystem": "pypi"
},
{
"name": "arviz",
"direct": true,
"version": "0.22.0",
"ecosystem": "pypi"
},
{
"name": "einops",
"direct": true,
"version": "0.8.1",
"ecosystem": "pypi"
},
{
"name": "getdist",
"direct": true,
"version": "1.7.2",
"ecosystem": "pypi"
},
{
"name": "gpytorch",
"direct": true,
"version": "1.14",
"ecosystem": "pypi"
},
{
"name": "harmonic",
"direct": true,
"version": "1.3.0",
"ecosystem": "pypi"
},
{
"name": "harmonic",
"direct": true,
"version": "1.3.1",
"ecosystem": "pypi"
},
{
"name": "ipywidgets",
"direct": true,
"version": "8.1.7",
"ecosystem": "pypi"
},
{
"name": "joblib",
"direct": true,
"version": "1.5.1",
"ecosystem": "pypi"
},
{
"name": "lightgbm",
"direct": true,
"version": "4.6.0",
"ecosystem": "pypi"
},
{
"name": "matplotlib",
"direct": true,
"version": "3.10.5",
"ecosystem": "pypi"
},
{
"name": "numpy",
"direct": true,
"version": "1.26.4",
"ecosystem": "pypi"
},
{
"name": "numpy",
"direct": true,
"version": "2.3.2",
"ecosystem": "pypi"
},
{
"name": "pandas",
"direct": true,
"version": "2.3.1",
"ecosystem": "pypi"
},
{
"name": "pyro-ppl",
"direct": true,
"version": "1.9.1",
"ecosystem": "pypi"
},
{
"name": "salib",
"direct": true,
"version": "1.5.1",
"ecosystem": "pypi"
},
{
"name": "scikit-learn",
"direct": true,
"version": "1.7.2",
"ecosystem": "pypi"
},
{
"name": "scikit-learn",
"direct": true,
"version": "1.8.0",
"ecosystem": "pypi"
},
{
"name": "scipy",
"direct": true,
"version": "1.15.3",
"ecosystem": "pypi"
},
{
"name": "scipy",
"direct": true,
"version": "1.16.1",
"ecosystem": "pypi"
},
{
"name": "seaborn",
"direct": true,
"version": "0.13.2",
"ecosystem": "pypi"
},
{
"name": "torch",
"direct": true,
"version": "2.11.0+cu126",
"ecosystem": "pypi"
},
{
"name": "torch",
"direct": true,
"version": "2.7.1",
"ecosystem": "pypi"
},
{
"name": "torcheval",
"direct": true,
"version": "0.0.7",
"ecosystem": "pypi"
},
{
"name": "torchmetrics",
"direct": true,
"version": "1.8.0",
"ecosystem": "pypi"
},
{
"name": "torchrbf",
"direct": true,
"version": "1.0.0",
"ecosystem": "pypi"
},
{
"name": "tqdm",
"direct": true,
"version": "4.67.1",
"ecosystem": "pypi"
},
{
"name": "absl-py",
"direct": false,
"version": "2.4.0",
"ecosystem": "pypi"
},
{
"name": "accessible-pygments",
"direct": false,
"version": "0.0.5",
"ecosystem": "pypi"
},
{
"name": "aiofiles",
"direct": false,
"version": "25.1.0",
"ecosystem": "pypi"
},
{
"name": "alabaster",
"direct": false,
"version": "0.7.16",
"ecosystem": "pypi"
},
{
"name": "annotated-types",
"direct": false,
"version": "0.7.0",
"ecosystem": "pypi"
},
{
"name": "anyio",
"direct": false,
"version": "4.13.0",
"ecosystem": "pypi"
},
{
"name": "appnope",
"direct": false,
"version": "0.1.4",
"ecosystem": "pypi"
},
{
"name": "argon2-cffi",
"direct": false,
"version": "25.1.0",
"ecosystem": "pypi"
},
{
"name": "argon2-cffi-bindings",
"direct": false,
"version": "25.1.0",
"ecosystem": "pypi"
},
{
"name": "arrow",
"direct": false,
"version": "1.4.0",
"ecosystem": "pypi"
},
{
"name": "asciitree",
"direct": false,
"version": "0.3.3",
"ecosystem": "pypi"
},
{
"name": "asttokens",
"direct": false,
"version": "3.0.0",
"ecosystem": "pypi"
},
{
"name": "async-lru",
"direct": false,
"version": "2.3.0",
"ecosystem": "pypi"
},
{
"name": "attrs",
"direct": false,
"version": "25.3.0",
"ecosystem": "pypi"
},
{
"name": "autoemulate",
"direct": false,
"version": "1.1",
"ecosystem": "pypi"
},
{
"name": "autoemulate",
"direct": false,
"version": "2.1.1",
"ecosystem": "pypi"
},
{
"name": "babel",
"direct": false,
"version": "2.17.0",
"ecosystem": "pypi"
},
{
"name": "beautifulsoup4",
"direct": false,
"version": "4.13.4",
"ecosystem": "pypi"
},
{
"name": "black",
"direct": false,
"version": "25.1.0",
"ecosystem": "pypi"
},
{
"name": "bleach",
"direct": false,
"version": "6.3.0",
"ecosystem": "pypi"
},
{
"name": "certifi",
"direct": false,
"version": "2025.7.14",
"ecosystem": "pypi"
},
{
"name": "cffi",
"direct": false,
"version": "1.17.1",
"ecosystem": "pypi"
},
{
"name": "cfgv",
"direct": false,
"version": "3.4.0",
"ecosystem": "pypi"
},
{
"name": "charset-normalizer",
"direct": false,
"version": "3.4.2",
"ecosystem": "pypi"
},
{
"name": "chex",
"direct": false,
"version": "0.1.90",
"ecosystem": "pypi"
},
{
"name": "click",
"direct": false,
"version": "8.2.1",
"ecosystem": "pypi"
},
{
"name": "cloudpickle",
"direct": false,
"version": "3.1.2",
"ecosystem": "pypi"
},
{
"name": "colorama",
"direct": false,
"version": "0.4.6",
"ecosystem": "pypi"
},
{
"name": "colorlog",
"direct": false,
"version": "6.10.1",
"ecosystem": "pypi"
},
{
"name": "comm",
"direct": false,
"version": "0.2.3",
"ecosystem": "pypi"
},
{
"name": "configmypy",
"direct": false,
"version": "0.2.0",
"ecosystem": "pypi"
},
{
"name": "contourpy",
"direct": false,
"version": "1.3.2",
"ecosystem": "pypi"
},
{
"name": "contourpy",
"direct": false,
"version": "1.3.3",
"ecosystem": "pypi"
},
{
"name": "coverage",
"direct": false,
"version": "7.10.1",
"ecosystem": "pypi"
},
{
"name": "crc32c",
"direct": false,
"version": "2.7.1",
"ecosystem": "pypi"
},
{
"name": "cuda-bindings",
"direct": false,
"version": "12.9.6",
"ecosystem": "pypi"
},
{
"name": "cuda-pathfinder",
"direct": false,
"version": "1.5.4",
"ecosystem": "pypi"
},
{
"name": "cuda-toolkit",
"direct": false,
"version": "12.6.3",
"ecosystem": "pypi"
},
{
"name": "cycler",
"direct": false,
"version": "0.12.1",
"ecosystem": "pypi"
},
{
"name": "cython",
"direct": false,
"version": "3.2.4",
"ecosystem": "pypi"
},
{
"name": "dataclasses-json",
"direct": false,
"version": "0.6.7",
"ecosystem": "pypi"
},
{
"name": "debugpy",
"direct": false,
"version": "1.8.15",
"ecosystem": "pypi"
},
{
"name": "decorator",
"direct": false,
"version": "5.2.1",
"ecosystem": "pypi"
},
{
"name": "defusedxml",
"direct": false,
"version": "0.7.1",
"ecosystem": "pypi"
},
{
"name": "dill",
"direct": false,
"version": "0.4.0",
"ecosystem": "pypi"
},
{
"name": "distlib",
"direct": false,
"version": "0.4.0",
"ecosystem": "pypi"
},
{
"name": "distrax",
"direct": false,
"version": "0.1.5",
"ecosystem": "pypi"
},
{
"name": "distrax",
"direct": false,
"version": "0.1.7",
"ecosystem": "pypi"
},
{
"name": "dm-tree",
"direct": false,
"version": "0.1.9",
"ecosystem": "pypi"
},
{
"name": "docutils",
"direct": false,
"version": "0.21.2",
"ecosystem": "pypi"
},
{
"name": "donfig",
"direct": false,
"version": "0.8.1.post1",
"ecosystem": "pypi"
},
{
"name": "etils",
"direct": false,
"version": "1.13.0",
"ecosystem": "pypi"
},
{
"name": "etils",
"direct": false,
"version": "1.14.0",
"ecosystem": "pypi"
},
{
"name": "exceptiongroup",
"direct": false,
"version": "1.3.0",
"ecosystem": "pypi"
},
{
"name": "execnet",
"direct": false,
"version": "2.1.2",
"ecosystem": "pypi"
},
{
"name": "executing",
"direct": false,
"version": "2.2.0",
"ecosystem": "pypi"
},
{
"name": "fasteners",
"direct": false,
"version": "0.20",
"ecosystem": "pypi"
},
{
"name": "fastjsonschema",
"direct": false,
"version": "2.21.1",
"ecosystem": "pypi"
},
{
"name": "filelock",
"direct": false,
"version": "3.18.0",
"ecosystem": "pypi"
},
{
"name": "flax",
"direct": false,
"version": "0.10.7",
"ecosystem": "pypi"
},
{
"name": "flax",
"direct": false,
"version": "0.12.6",
"ecosystem": "pypi"
},
{
"name": "fonttools",
"direct": false,
"version": "4.59.0",
"ecosystem": "pypi"
},
{
"name": "fqdn",
"direct": false,
"version": "1.5.1",
"ecosystem": "pypi"
},
{
"name": "fsspec",
"direct": false,
"version": "2025.7.0",
"ecosystem": "pypi"
},
{
"name": "furo",
"direct": false,
"version": "2025.7.19",
"ecosystem": "pypi"
},
{
"name": "gast",
"direct": false,
"version": "0.7.0",
"ecosystem": "pypi"
},
{
"name": "gitdb",
"direct": false,
"version": "4.0.12",
"ecosystem": "pypi"
},
{
"name": "gitpython",
"direct": false,
"version": "3.1.45",
"ecosystem": "pypi"
},
{
"name": "greenlet",
"direct": false,
"version": "3.2.3",
"ecosystem": "pypi"
},
{
"name": "h11",
"direct": false,
"version": "0.16.0",
"ecosystem": "pypi"
},
{
"name": "h5netcdf",
"direct": false,
"version": "1.6.3",
"ecosystem": "pypi"
},
{
"name": "h5py",
"direct": false,
"version": "3.14.0",
"ecosystem": "pypi"
},
{
"name": "httpcore",
"direct": false,
"version": "1.0.9",
"ecosystem": "pypi"
},
{
"name": "httpx",
"direct": false,
"version": "0.28.1",
"ecosystem": "pypi"
},
{
"name": "humanize",
"direct": false,
"version": "4.15.0",
"ecosystem": "pypi"
},
{
"name": "identify",
"direct": false,
"version": "2.6.12",
"ecosystem": "pypi"
},
{
"name": "idna",
"direct": false,
"version": "3.10",
"ecosystem": "pypi"
},
{
"name": "imagesize",
"direct": false,
"version": "1.4.1",
"ecosystem": "pypi"
},
{
"name": "importlib-metadata",
"direct": false,
"version": "8.7.0",
"ecosystem": "pypi"
},
{
"name": "importlib-resources",
"direct": false,
"version": "6.5.2",
"ecosystem": "pypi"
},
{
"name": "iniconfig",
"direct": false,
"version": "2.1.0",
"ecosystem": "pypi"
},
{
"name": "ipykernel",
"direct": false,
"version": "6.30.0",
"ecosystem": "pypi"
},
{
"name": "ipython",
"direct": false,
"version": "8.37.0",
"ecosystem": "pypi"
},
{
"name": "ipython",
"direct": false,
"version": "9.4.0",
"ecosystem": "pypi"
},
{
"name": "ipython-pygments-lexers",
"direct": false,
"version": "1.1.1",
"ecosystem": "pypi"
},
{
"name": "isoduration",
"direct": false,
"version": "20.11.0",
"ecosystem": "pypi"
},
{
"name": "jax",
"direct": false,
"version": "0.6.2",
"ecosystem": "pypi"
},
{
"name": "jax",
"direct": false,
"version": "0.9.2",
"ecosystem": "pypi"
},
{
"name": "jaxlib",
"direct": false,
"version": "0.6.2",
"ecosystem": "pypi"
},
{
"name": "jaxlib",
"direct": false,
"version": "0.9.2",
"ecosystem": "pypi"
},
{
"name": "jaxtyping",
"direct": false,
"version": "0.3.2",
"ecosystem": "pypi"
},
{
"name": "jedi",
"direct": false,
"version": "0.19.2",
"ecosystem": "pypi"
},
{
"name": "jinja2",
"direct": false,
"version": "3.1.6",
"ecosystem": "pypi"
},
{
"name": "json5",
"direct": false,
"version": "0.13.0",
"ecosystem": "pypi"
},
{
"name": "jsonpointer",
"direct": false,
"version": "3.1.1",
"ecosystem": "pypi"
},
{
"name": "jsonschema",
"direct": false,
"version": "4.25.0",
"ecosystem": "pypi"
},
{
"name": "jsonschema-specifications",
"direct": false,
"version": "2025.4.1",
"ecosystem": "pypi"
},
{
"name": "jupyter",
"direct": false,
"version": "1.1.1",
"ecosystem": "pypi"
},
{
"name": "jupyter-book",
"direct": false,
"version": "1.0.4.post1",
"ecosystem": "pypi"
},
{
"name": "jupyter-cache",
"direct": false,
"version": "1.0.1",
"ecosystem": "pypi"
},
{
"name": "jupyter-client",
"direct": false,
"version": "8.6.3",
"ecosystem": "pypi"
},
{
"name": "jupyter-console",
"direct": false,
"version": "6.6.3",
"ecosystem": "pypi"
},
{
"name": "jupyter-core",
"direct": false,
"version": "5.8.1",
"ecosystem": "pypi"
},
{
"name": "jupyter-events",
"direct": false,
"version": "0.12.0",
"ecosystem": "pypi"
},
{
"name": "jupyter-lsp",
"direct": false,
"version": "2.3.0",
"ecosystem": "pypi"
},
{
"name": "jupyter-server",
"direct": false,
"version": "2.17.0",
"ecosystem": "pypi"
},
{
"name": "jupyter-server-terminals",
"direct": false,
"version": "0.5.4",
"ecosystem": "pypi"
},
{
"name": "jupyterlab",
"direct": false,
"version": null,
"ecosystem": "pypi"
},
{
"name": "jupyterlab",
"direct": false,
"version": "4.4.5",
"ecosystem": "pypi"
},
{
"name": "jupyterlab-pygments",
"direct": false,
"version": "0.3.0",
"ecosystem": "pypi"
},
{
"name": "jupyterlab-server",
"direct": false,
"version": "2.28.0",
"ecosystem": "pypi"
},
{
"name": "jupyterlab-widgets",
"direct": false,
"version": "3.0.15",
"ecosystem": "pypi"
},
{
"name": "kiwisolver",
"direct": false,
"version": "1.4.8",
"ecosystem": "pypi"
},
{
"name": "lark",
"direct": false,
"version": "1.3.1",
"ecosystem": "pypi"
},
{
"name": "latexcodec",
"direct": false,
"version": "3.0.1",
"ecosystem": "pypi"
},
{
"name": "lightning-utilities",
"direct": false,
"version": "0.15.0",
"ecosystem": "pypi"
},
{
"name": "linear-operator",
"direct": false,
"version": "0.6",
"ecosystem": "pypi"
},
{
"name": "linkify-it-py",
"direct": false,
"version": "2.0.3",
"ecosystem": "pypi"
},
{
"name": "markdown-it-py",
"direct": false,
"version": "3.0.0",
"ecosystem": "pypi"
},
{
"name": "markupsafe",
"direct": false,
"version": "3.0.2",
"ecosystem": "pypi"
},
{
"name": "marshmallow",
"direct": false,
"version": "3.26.2",
"ecosystem": "pypi"
},
{
"name": "matplotlib-inline",
"direct": false,
"version": "0.1.7",
"ecosystem": "pypi"
},
{
"name": "mdit-py-plugins",
"direct": false,
"version": "0.4.2",
"ecosystem": "pypi"
},
{
"name": "mdurl",
"direct": false,
"version": "0.1.2",
"ecosystem": "pypi"
},
{
"name": "mistune",
"direct": false,
"version": "3.2.0",
"ecosystem": "pypi"
},
{
"name": "mizani",
"direct": false,
"version": "0.14.2",
"ecosystem": "pypi"
},
{
"name": "ml-dtypes",
"direct": false,
"version": "0.5.4",
"ecosystem": "pypi"
},
{
"name": "modularcirc",
"direct": false,
"version": null,
"ecosystem": "pypi"
},
{
"name": "mpmath",
"direct": false,
"version": "1.3.0",
"ecosystem": "pypi"
},
{
"name": "msgpack",
"direct": false,
"version": "1.1.2",
"ecosystem": "pypi"
},
{
"name": "multiprocess",
"direct": false,
"version": "0.70.18",
"ecosystem": "pypi"
},
{
"name": "mypy-extensions",
"direct": false,
"version": "1.1.0",
"ecosystem": "pypi"
},
{
"name": "myst-nb",
"direct": false,
"version": "1.3.0",
"ecosystem": "pypi"
},
{
"name": "myst-parser",
"direct": false,
"version": "3.0.1",
"ecosystem": "pypi"
},
{
"name": "nbclient",
"direct": false,
"version": "0.10.2",
"ecosystem": "pypi"
},
{
"name": "nbconvert",
"direct": false,
"version": "7.17.0",
"ecosystem": "pypi"
},
{
"name": "nbformat",
"direct": false,
"version": "5.10.4",
"ecosystem": "pypi"
},
{
"name": "nest-asyncio",
"direct": false,
"version": "1.6.0",
"ecosystem": "pypi"
},
{
"name": "networkx",
"direct": false,
"version": "3.4.2",
"ecosystem": "pypi"
},
{
"name": "networkx",
"direct": false,
"version": "3.5",
"ecosystem": "pypi"
},
{
"name": "neuraloperator",
"direct": false,
"version": "1.0.2",
"ecosystem": "pypi"
},
{
"name": "nodeenv",
"direct": false,
"version": "1.9.1",
"ecosystem": "pypi"
},
{
"name": "notebook",
"direct": false,
"version": "7.4.5",
"ecosystem": "pypi"
},
{
"name": "notebook-shim",
"direct": false,
"version": "0.2.4",
"ecosystem": "pypi"
},
{
"name": "numcodecs",
"direct": false,
"version": "0.13.1",
"ecosystem": "pypi"
},
{
"name": "numcodecs",
"direct": false,
"version": "0.16.1",
"ecosystem": "pypi"
},
{
"name": "nvidia-cublas-cu12",
"direct": false,
"version": "12.6.4.1",
"ecosystem": "pypi"
},
{
"name": "nvidia-cuda-cupti-cu12",
"direct": false,
"version": "12.6.80",
"ecosystem": "pypi"
},
{
"name": "nvidia-cuda-nvrtc-cu12",
"direct": false,
"version": "12.6.85",
"ecosystem": "pypi"
},
{
"name": "nvidia-cuda-runtime-cu12",
"direct": false,
"version": "12.6.77",
"ecosystem": "pypi"
},
{
"name": "nvidia-cudnn-cu12",
"direct": false,
"version": "9.10.2.21",
"ecosystem": "pypi"
},
{
"name": "nvidia-cufft-cu12",
"direct": false,
"version": "11.3.0.4",
"ecosystem": "pypi"
},
{
"name": "nvidia-cufile-cu12",
"direct": false,
"version": "1.11.1.6",
"ecosystem": "pypi"
},
{
"name": "nvidia-curand-cu12",
"direct": false,
"version": "10.3.7.77",
"ecosystem": "pypi"
},
{
"name": "nvidia-cusolver-cu12",
"direct": false,
"version": "11.7.1.2",
"ecosystem": "pypi"
},
{
"name": "nvidia-cusparse-cu12",
"direct": false,
"version": "12.5.4.2",
"ecosystem": "pypi"
},
{
"name": "nvidia-cusparselt-cu12",
"direct": false,
"version": "0.7.1",
"ecosystem": "pypi"
},
{
"name": "nvidia-nccl-cu12",
"direct": false,
"version": "2.28.9",
"ecosystem": "pypi"
},
{
"name": "nvidia-nvjitlink-cu12",
"direct": false,
"version": "12.6.85",
"ecosystem": "pypi"
},
{
"name": "nvidia-nvshmem-cu12",
"direct": false,
"version": "3.4.5",
"ecosystem": "pypi"
},
{
"name": "nvidia-nvtx-cu12",
"direct": false,
"version": "12.6.77",
"ecosystem": "pypi"
},
{
"name": "opt-einsum",
"direct": false,
"version": "3.4.0",
"ecosystem": "pypi"
},
{
"name": "optax",
"direct": false,
"version": "0.2.8",
"ecosystem": "pypi"
},
{
"name": "orbax-checkpoint",
"direct": false,
"version": "0.11.33",
"ecosystem": "pypi"
},
{
"name": "orbax-export",
"direct": false,
"version": "0.0.8",
"ecosystem": "pypi"
},
{
"name": "overrides",
"direct": false,
"version": "7.7.0",
"ecosystem": "pypi"
},
{
"name": "packaging",
"direct": false,
"version": "25.0",
"ecosystem": "pypi"
},
{
"name": "pandocfilters",
"direct": false,
"version": "1.5.1",
"ecosystem": "pypi"
},
{
"name": "parso",
"direct": false,
"version": "0.8.4",
"ecosystem": "pypi"
},
{
"name": "pathspec",
"direct": false,
"version": "0.12.1",
"ecosystem": "pypi"
},
{
"name": "patsy",
"direct": false,
"version": "1.0.1",
"ecosystem": "pypi"
},
{
"name": "pexpect",
"direct": false,
"version": "4.9.0",
"ecosystem": "pypi"
},
{
"name": "pillow",
"direct": false,
"version": "11.3.0",
"ecosystem": "pypi"
},
{
"name": "platformdirs",
"direct": false,
"version": "4.3.8",
"ecosystem": "pypi"
},
{
"name": "plotnine",
"direct": false,
"version": "0.15.0",
"ecosystem": "pypi"
},
{
"name": "pluggy",
"direct": false,
"version": "1.6.0",
"ecosystem": "pypi"
},
{
"name": "pre-commit",
"direct": false,
"version": "4.2.0",
"ecosystem": "pypi"
},
{
"name": "prometheus-client",
"direct": false,
"version": "0.24.1",
"ecosystem": "pypi"
},
{
"name": "prompt-toolkit",
"direct": false,
"version": "3.0.51",
"ecosystem": "pypi"
},
{
"name": "protobuf",
"direct": false,
"version": "6.31.1",
"ecosystem": "pypi"
},
{
"name": "psutil",
"direct": false,
"version": "7.0.0",
"ecosystem": "pypi"
},
{
"name": "ptyprocess",
"direct": false,
"version": "0.7.0",
"ecosystem": "pypi"
},
{
"name": "pure-eval",
"direct": false,
"version": "0.2.3",
"ecosystem": "pypi"
},
{
"name": "pybtex",
"direct": false,
"version": "0.25.1",
"ecosystem": "pypi"
},
{
"name": "pybtex-docutils",
"direct": false,
"version": "1.0.3",
"ecosystem": "pypi"
},
{
"name": "pycparser",
"direct": false,
"version": "2.22",
"ecosystem": "pypi"
},
{
"name": "pydantic",
"direct": false,
"version": "2.11.7",
"ecosystem": "pypi"
},
{
"name": "pydantic-core",
"direct": false,
"version": "2.33.2",
"ecosystem": "pypi"
},
{
"name": "pydata-sphinx-theme",
"direct": false,
"version": "0.15.4",
"ecosystem": "pypi"
},
{
"name": "pygments",
"direct": false,
"version": "2.19.2",
"ecosystem": "pypi"
},
{
"name": "pyparsing",
"direct": false,
"version": "3.2.3",
"ecosystem": "pypi"
},
{
"name": "pyright",
"direct": false,
"version": "1.1.405",
"ecosystem": "pypi"
},
{
"name": "pyro-api",
"direct": false,
"version": "0.1.2",
"ecosystem": "pypi"
},
{
"name": "pytest",
"direct": false,
"version": "8.4.1",
"ecosystem": "pypi"
},
{
"name": "pytest-cov",
"direct": false,
"version": "6.2.1",
"ecosystem": "pypi"
},
{
"name": "pytest-mock",
"direct": false,
"version": "3.14.1",
"ecosystem": "pypi"
},
{
"name": "pytest-xdist",
"direct": false,
"version": "3.8.0",
"ecosystem": "pypi"
},
{
"name": "python-dateutil",
"direct": false,
"version": "2.9.0.post0",
"ecosystem": "pypi"
},
{
"name": "python-json-logger",
"direct": false,
"version": "4.0.0",
"ecosystem": "pypi"
},
{
"name": "pytz",
"direct": false,
"version": "2025.2",
"ecosystem": "pypi"
},
{
"name": "pywin32",
"direct": false,
"version": "311",
"ecosystem": "pypi"
},
{
"name": "pywinpty",
"direct": false,
"version": "3.0.3",
"ecosystem": "pypi"
},
{
"name": "pyyaml",
"direct": false,
"version": "6.0.2",
"ecosystem": "pypi"
},
{
"name": "pyzmq",
"direct": false,
"version": "27.0.0",
"ecosystem": "pypi"
},
{
"name": "referencing",
"direct": false,
"version": "0.36.2",
"ecosystem": "pypi"
},
{
"name": "requests",
"direct": false,
"version": "2.32.4",
"ecosystem": "pypi"
},
{
"name": "rfc3339-validator",
"direct": false,
"version": "0.1.4",
"ecosystem": "pypi"
},
{
"name": "rfc3986-validator",
"direct": false,
"version": "0.1.1",
"ecosystem": "pypi"
},
{
"name": "rfc3987-syntax",
"direct": false,
"version": "1.1.0",
"ecosystem": "pypi"
},
{
"name": "rich",
"direct": false,
"version": "14.3.3",
"ecosystem": "pypi"
},
{
"name": "rpds-py",
"direct": false,
"version": "0.26.0",
"ecosystem": "pypi"
},
{
"name": "ruamel-yaml",
"direct": false,
"version": "0.18.14",
"ecosystem": "pypi"
},
{
"name": "ruamel-yaml-clib",
"direct": false,
"version": "0.2.12",
"ecosystem": "pypi"
},
{
"name": "ruff",
"direct": false,
"version": "0.12.11",
"ecosystem": "pypi"
},
{
"name": "send2trash",
"direct": false,
"version": "2.1.0",
"ecosystem": "pypi"
},
{
"name": "sentry-sdk",
"direct": false,
"version": "2.34.1",
"ecosystem": "pypi"
},
{
"name": "setuptools",
"direct": false,
"version": "68.0.0",
"ecosystem": "pypi"
},
{
"name": "setuptools-scm",
"direct": false,
"version": "9.2.2",
"ecosystem": "pypi"
},
{
"name": "simplejson",
"direct": false,
"version": "3.20.2",
"ecosystem": "pypi"
},
{
"name": "six",
"direct": false,
"version": "1.17.0",
"ecosystem": "pypi"
},
{
"name": "smmap",
"direct": false,
"version": "5.0.2",
"ecosystem": "pypi"
},
{
"name": "snowballstemmer",
"direct": false,
"version": "3.0.1",
"ecosystem": "pypi"
},
{
"name": "soupsieve",
"direct": false,
"version": "2.7",
"ecosystem": "pypi"
},
{
"name": "sphinx",
"direct": false,
"version": "7.4.7",
"ecosystem": "pypi"
},
{
"name": "sphinx-autodoc-typehints",
"direct": false,
"version": "2.3.0",
"ecosystem": "pypi"
},
{
"name": "sphinx-basic-ng",
"direct": false,
"version": "1.0.0b2",
"ecosystem": "pypi"
},
{
"name": "sphinx-book-theme",
"direct": false,
"version": "1.1.4",
"ecosystem": "pypi"
},
{
"name": "sphinx-comments",
"direct": false,
"version": "0.0.3",
"ecosystem": "pypi"
},
{
"name": "sphinx-copybutton",
"direct": false,
"version": "0.5.2",
"ecosystem": "pypi"
},
{
"name": "sphinx-design",
"direct": false,
"version": "0.6.1",
"ecosystem": "pypi"
},
{
"name": "sphinx-external-toc",
"direct": false,
"version": "1.0.1",
"ecosystem": "pypi"
},
{
"name": "sphinx-jupyterbook-latex",
"direct": false,
"version": "1.0.0",
"ecosystem": "pypi"
},
{
"name": "sphinx-multitoc-numbering",
"direct": false,
"version": "0.1.3",
"ecosystem": "pypi"
},
{
"name": "sphinx-thebe",
"direct": false,
"version": "0.3.1",
"ecosystem": "pypi"
},
{
"name": "sphinx-togglebutton",
"direct": false,
"version": "0.3.2",
"ecosystem": "pypi"
},
{
"name": "sphinxcontrib-applehelp",
"direct": false,
"version": "2.0.0",
"ecosystem": "pypi"
},
{
"name": "sphinxcontrib-bibtex",
"direct": false,
"version": "2.6.5",
"ecosystem": "pypi"
},
{
"name": "sphinxcontrib-devhelp",
"direct": false,
"version": "2.0.0",
"ecosystem": "pypi"
},
{
"name": "sphinxcontrib-htmlhelp",
"direct": false,
"version": "2.1.0",
"ecosystem": "pypi"
},
{
"name": "sphinxcontrib-jsmath",
"direct": false,
"version": "1.0.1",
"ecosystem": "pypi"
},
{
"name": "sphinxcontrib-qthelp",
"direct": false,
"version": "2.0.0",
"ecosystem": "pypi"
},
{
"name": "sphinxcontrib-serializinghtml",
"direct": false,
"version": "2.0.0",
"ecosystem": "pypi"
},
{
"name": "sqlalchemy",
"direct": false,
"version": "2.0.42",
"ecosystem": "pypi"
},
{
"name": "stack-data",
"direct": false,
"version": "0.6.3",
"ecosystem": "pypi"
},
{
"name": "statsmodels",
"direct": false,
"version": "0.14.5",
"ecosystem": "pypi"
},
{
"name": "sympy",
"direct": false,
"version": "1.14.0",
"ecosystem": "pypi"
},
{
"name": "tabulate",
"direct": false,
"version": "0.9.0",
"ecosystem": "pypi"
},
{
"name": "tensorflow-probability",
"direct": false,
"version": "0.25.0",
"ecosystem": "pypi"
},
{
"name": "tensorly",
"direct": false,
"version": "0.9.0",
"ecosystem": "pypi"
},
{
"name": "tensorly-torch",
"direct": false,
"version": "0.5.0",
"ecosystem": "pypi"
},
{
"name": "tensorstore",
"direct": false,
"version": "0.1.78",
"ecosystem": "pypi"
},
{
"name": "tensorstore",
"direct": false,
"version": "0.1.82",
"ecosystem": "pypi"
},
{
"name": "terminado",
"direct": false,
"version": "0.18.1",
"ecosystem": "pypi"
},
{
"name": "tfp-nightly",
"direct": false,
"version": "0.26.0.dev20260325",
"ecosystem": "pypi"
},
{
"name": "the-well",
"direct": false,
"version": "1.1.0",
"ecosystem": "pypi"
},
{
"name": "threadpoolctl",
"direct": false,
"version": "3.6.0",
"ecosystem": "pypi"
},
{
"name": "tinycss2",
"direct": false,
"version": "1.4.0",
"ecosystem": "pypi"
},
{
"name": "tomli",
"direct": false,
"version": "2.2.1",
"ecosystem": "pypi"
},
{
"name": "toolz",
"direct": false,
"version": "1.1.0",
"ecosystem": "pypi"
},
{
"name": "torch-harmonics",
"direct": false,
"version": "0.7.3",
"ecosystem": "pypi"
},
{
"name": "tornado",
"direct": false,
"version": "6.5.1",
"ecosystem": "pypi"
},
{
"name": "traitlets",
"direct": false,
"version": "5.14.3",
"ecosystem": "pypi"
},
{
"name": "treescope",
"direct": false,
"version": "0.1.10",
"ecosystem": "pypi"
},
{
"name": "triton",
"direct": false,
"version": "3.6.0",
"ecosystem": "pypi"
},
{
"name": "typing-extensions",
"direct": false,
"version": "4.14.1",
"ecosystem": "pypi"
},
{
"name": "typing-inspect",
"direct": false,
"version": "0.9.0",
"ecosystem": "pypi"
},
{
"name": "typing-inspection",
"direct": false,
"version": "0.4.1",
"ecosystem": "pypi"
},
{
"name": "tzdata",
"direct": false,
"version": "2025.2",
"ecosystem": "pypi"
},
{
"name": "uc-micro-py",
"direct": false,
"version": "1.0.3",
"ecosystem": "pypi"
},
{
"name": "uri-template",
"direct": false,
"version": "1.3.0",
"ecosystem": "pypi"
},
{
"name": "urllib3",
"direct": false,
"version": "2.5.0",
"ecosystem": "pypi"
},
{
"name": "uvloop",
"direct": false,
"version": "0.22.1",
"ecosystem": "pypi"
},
{
"name": "virtualenv",
"direct": false,
"version": "20.32.0",
"ecosystem": "pypi"
},
{
"name": "wadler-lindig",
"direct": false,
"version": "0.1.7",
"ecosystem": "pypi"
},
{
"name": "wandb",
"direct": false,
"version": "0.21.1",
"ecosystem": "pypi"
},
{
"name": "wcwidth",
"direct": false,
"version": "0.2.13",
"ecosystem": "pypi"
},
{
"name": "webcolors",
"direct": false,
"version": "25.10.0",
"ecosystem": "pypi"
},
{
"name": "webencodings",
"direct": false,
"version": "0.5.1",
"ecosystem": "pypi"
},
{
"name": "websocket-client",
"direct": false,
"version": "1.9.0",
"ecosystem": "pypi"
},
{
"name": "wheel",
"direct": false,
"version": "0.41.0",
"ecosystem": "pypi"
},
{
"name": "widgetsnbextension",
"direct": false,
"version": "4.0.14",
"ecosystem": "pypi"
},
{
"name": "wrapt",
"direct": false,
"version": "2.1.2",
"ecosystem": "pypi"
},
{
"name": "xarray",
"direct": false,
"version": "2025.6.1",
"ecosystem": "pypi"
},
{
"name": "xarray",
"direct": false,
"version": "2025.7.1",
"ecosystem": "pypi"
},
{
"name": "xarray-einstats",
"direct": false,
"version": "0.8.0",
"ecosystem": "pypi"
},
{
"name": "xarray-einstats",
"direct": false,
"version": "0.9.1",
"ecosystem": "pypi"
},
{
"name": "zarr",
"direct": false,
"version": "2.18.3",
"ecosystem": "pypi"
},
{
"name": "zarr",
"direct": false,
"version": "3.1.1",
"ecosystem": "pypi"
},
{
"name": "zipp",
"direct": false,
"version": "3.23.0",
"ecosystem": "pypi"
}
],
"collected": true,
"truncated": false,
"total_count": 316,
"direct_count": 27,
"indirect_count": 289
}
},
"maintainership": {
"issues": {
"open_prs": 7,
"merged_prs": 453,
"open_issues": 60,
"closed_ratio": 0.883,
"closed_issues": 454,
"closed_unmerged_prs": 39
},
"bus_factor": 2,
"bot_contributors": 1,
"top_contributors": [
{
"type": "User",
"login": "radka-j",
"commits": 1139,
"avatar_url": "https://avatars.githubusercontent.com/u/29207091?v=4"
},
{
"type": "User",
"login": "sgreenbury",
"commits": 975,
"avatar_url": "https://avatars.githubusercontent.com/u/50113363?v=4"
},
{
"type": "User",
"login": "mastoffel",
"commits": 646,
"avatar_url": "https://avatars.githubusercontent.com/u/7348440?v=4"
},
{
"type": "User",
"login": "edwardchalstrey1",
"commits": 637,
"avatar_url": "https://avatars.githubusercontent.com/u/5486164?v=4"
},
{
"type": "User",
"login": "marjanfamili",
"commits": 165,
"avatar_url": "https://avatars.githubusercontent.com/u/44607686?v=4"
},
{
"type": "User",
"login": "EdwinB12",
"commits": 111,
"avatar_url": "https://avatars.githubusercontent.com/u/64434531?v=4"
},
{
"type": "User",
"login": "cisprague",
"commits": 51,
"avatar_url": "https://avatars.githubusercontent.com/u/17131395?v=4"
},
{
"type": "User",
"login": "kallewesterling",
"commits": 49,
"avatar_url": "https://avatars.githubusercontent.com/u/7298727?v=4"
},
{
"type": "User",
"login": "crangelsmith",
"commits": 44,
"avatar_url": "https://avatars.githubusercontent.com/u/11162074?v=4"
},
{
"type": "User",
"login": "ContiPaolo",
"commits": 39,
"avatar_url": "https://avatars.githubusercontent.com/u/51111500?v=4"
}
],
"contributors_sampled": 24,
"top_contributor_share": 0.289
},
"quality_signals": {
"has_ci": true,
"has_tests": true,
"ci_workflows": [
"ci.yaml",
"docs.yaml",
"github-repo-stats.yml",
"precommit.yaml",
"release.yaml"
],
"has_docs_dir": true,
"linter_configs": [],
"has_editorconfig": false,
"has_linter_config": true,
"has_precommit_config": true
},
"security_signals": {
"lockfiles": [
"uv.lock"
],
"scorecard": {
"checks": [
{
"name": "Binary-Artifacts",
"score": 10,
"reason": "no binaries found in the repo",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#binary-artifacts"
},
{
"name": "Branch-Protection",
"score": null,
"reason": "internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#branch-protection"
},
{
"name": "CI-Tests",
"score": 10,
"reason": "9 out of 9 merged PRs checked by a CI test -- score normalized to 10",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#ci-tests"
},
{
"name": "CII-Best-Practices",
"score": 0,
"reason": "no effort to earn an OpenSSF best practices badge detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#cii-best-practices"
},
{
"name": "Code-Review",
"score": 10,
"reason": "all changesets reviewed",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#code-review"
},
{
"name": "Contributors",
"score": 10,
"reason": "project has 26 contributing companies or organizations",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#contributors"
},
{
"name": "Dangerous-Workflow",
"score": 10,
"reason": "no dangerous workflow patterns detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dangerous-workflow"
},
{
"name": "Dependency-Update-Tool",
"score": 0,
"reason": "no update tool detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dependency-update-tool"
},
{
"name": "Fuzzing",
"score": 0,
"reason": "project is not fuzzed",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#fuzzing"
},
{
"name": "License",
"score": 10,
"reason": "license file detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#license"
},
{
"name": "Maintained",
"score": 10,
"reason": "30 commit(s) and 15 issue activity found in the last 90 days -- score normalized to 10",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#maintained"
},
{
"name": "Packaging",
"score": null,
"reason": "packaging workflow not detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#packaging"
},
{
"name": "Pinned-Dependencies",
"score": 0,
"reason": "dependency not pinned by hash detected -- score normalized to 0",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#pinned-dependencies"
},
{
"name": "SAST",
"score": 0,
"reason": "SAST tool is not run on all commits -- score normalized to 0",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#sast"
},
{
"name": "Security-Policy",
"score": 0,
"reason": "security policy file not detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#security-policy"
},
{
"name": "Signed-Releases",
"score": null,
"reason": "no releases found",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#signed-releases"
},
{
"name": "Token-Permissions",
"score": 0,
"reason": "detected GitHub workflow tokens with excessive permissions",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#token-permissions"
},
{
"name": "Vulnerabilities",
"score": 0,
"reason": "109 existing vulnerabilities detected",
"documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#vulnerabilities"
}
],
"commit": "0168b27d4f13bc625a37a67ccc98b47366e1e61d",
"ran_at": "2026-07-26T08:34:24Z",
"aggregate_score": 4.7,
"scorecard_version": "v5.5.0"
},
"has_codeql_workflow": false,
"has_security_policy": false,
"has_dependabot_config": false
},
"contribution_flow": {
"collected": true,
"ci_last_run_at": "2026-07-25T23:20:17Z",
"oldest_open_prs": [
{
"number": 655,
"created_at": "2025-07-28T12:05:09Z",
"last_comment_at": "2025-07-28T18:15:50Z",
"last_comment_author": "github-actions"
},
{
"number": 763,
"created_at": "2025-08-21T11:15:41Z",
"last_comment_at": "2025-10-09T15:02:44Z",
"last_comment_author": "sgreenbury"
},
{
"number": 956,
"created_at": "2026-01-26T15:47:11Z",
"last_comment_at": "2026-02-13T10:03:41Z",
"last_comment_author": "radka-j"
},
{
"number": 967,
"created_at": "2026-03-01T12:28:13Z",
"last_comment_at": "2026-03-04T10:41:09Z",
"last_comment_author": "radka-j"
},
{
"number": 1008,
"created_at": "2026-05-14T19:20:18Z",
"last_comment_at": null,
"last_comment_author": null
},
{
"number": 1012,
"created_at": "2026-05-28T13:41:42Z",
"last_comment_at": "2026-06-05T07:28:53Z",
"last_comment_author": "radka-j"
},
{
"number": 1013,
"created_at": "2026-06-03T12:22:07Z",
"last_comment_at": "2026-06-18T09:45:28Z",
"last_comment_author": "radka-j"
}
],
"last_merged_pr_at": "2026-07-14T09:56:10Z",
"ci_last_conclusion": "SUCCESS",
"oldest_open_issues": [
{
"number": 313,
"created_at": "2025-02-28T06:24:03Z",
"last_comment_at": null,
"last_comment_author": null
},
{
"number": 314,
"created_at": "2025-03-03T09:43:14Z",
"last_comment_at": "2025-06-27T14:14:57Z",
"last_comment_author": "edwardchalstrey1"
},
{
"number": 410,
"created_at": "2025-04-22T10:19:55Z",
"last_comment_at": "2025-06-26T07:57:47Z",
"last_comment_author": "radka-j"
},
{
"number": 434,
"created_at": "2025-04-29T08:27:58Z",
"last_comment_at": "2025-08-20T12:15:24Z",
"last_comment_author": "radka-j"
},
{
"number": 470,
"created_at": "2025-05-14T14:23:50Z",
"last_comment_at": "2025-07-15T07:48:57Z",
"last_comment_author": "radka-j"
},
{
"number": 480,
"created_at": "2025-05-22T10:13:12Z",
"last_comment_at": null,
"last_comment_author": null
},
{
"number": 486,
"created_at": "2025-05-23T15:14:07Z",
"last_comment_at": "2025-07-14T14:32:05Z",
"last_comment_author": "sgreenbury"
},
{
"number": 491,
"created_at": "2025-05-28T14:19:30Z",
"last_comment_at": "2025-05-28T14:27:07Z",
"last_comment_author": "edwardchalstrey1"
},
{
"number": 497,
"created_at": "2025-06-02T12:00:10Z",
"last_comment_at": "2025-06-02T12:04:55Z",
"last_comment_author": "marjanfamili"
},
{
"number": 513,
"created_at": "2025-06-06T13:55:57Z",
"last_comment_at": null,
"last_comment_author": null
},
{
"number": 514,
"created_at": "2025-06-06T14:18:43Z",
"last_comment_at": null,
"last_comment_author": null
},
{
"number": 517,
"created_at": "2025-06-10T09:34:39Z",
"last_comment_at": "2025-10-15T16:00:44Z",
"last_comment_author": "radka-j"
},
{
"number": 537,
"created_at": "2025-06-16T17:54:51Z",
"last_comment_at": null,
"last_comment_author": null
},
{
"number": 550,
"created_at": "2025-06-18T16:53:55Z",
"last_comment_at": "2025-06-30T10:15:27Z",
"last_comment_author": "radka-j"
},
{
"number": 563,
"created_at": "2025-06-24T08:12:39Z",
"last_comment_at": null,
"last_comment_author": null
},
{
"number": 578,
"created_at": "2025-06-27T16:19:55Z",
"last_comment_at": null,
"last_comment_author": null
},
{
"number": 589,
"created_at": "2025-07-04T09:51:41Z",
"last_comment_at": null,
"last_comment_author": null
},
{
"number": 596,
"created_at": "2025-07-07T09:02:40Z",
"last_comment_at": null,
"last_comment_author": null
},
{
"number": 597,
"created_at": "2025-07-07T09:24:23Z",
"last_comment_at": null,
"last_comment_author": null
},
{
"number": 601,
"created_at": "2025-07-07T14:58:56Z",
"last_comment_at": "2025-09-30T14:31:00Z",
"last_comment_author": "radka-j"
}
]
}
},
"config": {
"disabled_metrics": [],
"disabled_categories": [],
"disabled_components": {}
},
"source": {
"url": "https://github.com/alan-turing-institute/autoemulate",
"host": "github.com",
"name": "autoemulate",
"owner": "alan-turing-institute"
},
"metrics": {
"overall": {
"key": "overall",
"band": "good",
"name": "Overall health",
"note": null,
"notes": [],
"value": 79,
"inputs": {
"security": 52,
"vitality": 94,
"community": 66,
"governance": 82,
"engineering": 90
},
"components": []
},
"categories": [
{
"key": "vitality",
"band": "excellent",
"name": "Vitality",
"value": 94,
"weight": 0.22,
"metrics": [
{
"key": "development_activity",
"band": "excellent",
"name": "Development activity",
"note": null,
"notes": [],
"value": 90,
"inputs": {
"commits_last_year": 1306,
"human_commit_share": 0.88,
"days_since_last_push": 0,
"active_weeks_last_year": 37
},
"components": [
{
"key": "push_recency",
"name": "Push recency",
"detail": "last push 0 days ago",
"points": 36,
"status": "met",
"details": [
{
"code": "push_recency",
"params": {
"days": 0
}
}
],
"max_points": 36
},
{
"key": "commit_cadence",
"name": "Commit cadence",
"detail": "37/52 weeks with commits",
"points": 25.6,
"status": "partial",
"details": [
{
"code": "commit_cadence_weeks",
"params": {
"weeks": 37
}
}
],
"max_points": 36
},
{
"key": "commit_volume",
"name": "Commit volume",
"detail": "1306 commits in the last year",
"points": 18,
"status": "met",
"details": [
{
"code": "commits_last_year",
"params": {
"count": 1306
}
}
],
"max_points": 18
},
{
"key": "openssf_scorecard_maintained",
"name": "OpenSSF Scorecard: Maintained",
"detail": "30 commit(s) and 15 issue activity found in the last 90 days -- score normalized to 10",
"points": 10,
"status": "met",
"details": [],
"max_points": 10
}
]
},
{
"key": "release_discipline",
"band": "excellent",
"name": "Release discipline",
"note": "Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Signed-Releases. Remaining weights renormalized.",
"notes": [
{
"code": "excluded_no_data",
"params": {
"components": [
"openssf_scorecard_signed_releases"
]
}
},
{
"code": "weights_renormalized",
"params": {}
}
],
"value": 100,
"inputs": {
"releases_count": 17,
"latest_release_tag": "v2.1.2",
"releases_from_tags": false,
"days_since_latest_release": 18,
"mean_days_between_releases": 41.9
},
"components": [
{
"key": "ships_releases",
"name": "Ships releases",
"detail": "17 releases published",
"points": 27,
"status": "met",
"details": [
{
"code": "releases_published",
"params": {
"count": 17
}
}
],
"max_points": 27
},
{
"key": "release_recency",
"name": "Release recency",
"detail": "latest release 18 days ago",
"points": 36,
"status": "met",
"details": [
{
"code": "release_recency",
"params": {
"days": 18
}
}
],
"max_points": 36
},
{
"key": "release_cadence",
"name": "Release cadence",
"detail": "a release every ~41.9 days",
"points": 27,
"status": "met",
"details": [
{
"code": "release_cadence",
"params": {
"gap": 41.9
}
}
],
"max_points": 27
},
{
"key": "openssf_scorecard_signed_releases",
"name": "OpenSSF Scorecard: Signed-Releases",
"detail": "no releases found",
"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
"params": {}
}
],
"max_points": 10
}
]
},
{
"key": "abandonment",
"band": "excellent",
"name": "Abandonment",
"note": null,
"notes": [],
"value": 100,
"inputs": {
"cap": null,
"state": "maintained",
"guards": [],
"signals": [],
"red_flag": false,
"multiplier_pct": 100,
"declared_reason": null,
"unverified_reason": null,
"unanswered_open_prs": null,
"unanswered_open_issues": null,
"days_since_last_merged_pr": null,
"days_since_last_human_commit": 11,
"days_since_last_human_commit_is_floor": false
},
"components": [
{
"key": "project_is_still_maintained",
"name": "Project is still maintained",
"detail": "last human commit 11 days ago",
"points": 100,
"status": "met",
"details": [
{
"code": "abandonment_maintained",
"params": {
"days": 11
}
}
],
"max_points": 100
}
]
}
],
"description": "Is the project alive — is code being written and are releases shipping?"
},
{
"key": "community",
"band": "moderate",
"name": "Community & Adoption",
"value": 66,
"weight": 0.18,
"metrics": [
{
"key": "popularity",
"band": "moderate",
"name": "Popularity & adoption",
"note": null,
"notes": [],
"value": 50,
"inputs": {
"forks": 42,
"stars": 118,
"watchers": 5,
"growth_state": "unverified",
"growth_factor_pct": 100,
"growth_unverified_reason": "no_history"
},
"components": [
{
"key": "stars",
"name": "Stars",
"detail": "118 stars",
"points": 33.5,
"status": "partial",
"details": [
{
"code": "stars",
"params": {
"count": 118
}
}
],
"max_points": 60
},
{
"key": "forks",
"name": "Forks",
"detail": "42 forks",
"points": 13.4,
"status": "partial",
"details": [
{
"code": "forks",
"params": {
"count": 42
}
}
],
"max_points": 25
},
{
"key": "watchers",
"name": "Watchers",
"detail": "5 watchers",
"points": 3.3,
"status": "partial",
"details": [
{
"code": "watchers",
"params": {
"count": 5
}
}
],
"max_points": 15
}
]
},
{
"key": "community_health",
"band": "excellent",
"name": "Community health",
"note": null,
"notes": [],
"value": 85,
"inputs": {
"has_readme": true,
"has_license": true,
"has_contributing": true,
"has_issue_template": false,
"has_code_of_conduct": true,
"has_pull_request_template": false
},
"components": [
{
"key": "readme",
"name": "README",
"detail": null,
"points": 22.5,
"status": "met",
"details": [],
"max_points": 22.5
},
{
"key": "license",
"name": "License",
"detail": "recognized license (MIT)",
"points": 22.5,
"status": "met",
"details": [
{
"code": "license_standard",
"params": {}
},
{
"code": "license_spdx",
"params": {
"spdx": "MIT"
}
}
],
"max_points": 22.5
},
{
"key": "contributing_guide",
"name": "CONTRIBUTING guide",
"detail": null,
"points": 18,
"status": "met",
"details": [],
"max_points": 18
},
{
"key": "code_of_conduct",
"name": "Code of conduct",
"detail": null,
"points": 13.5,
"status": "met",
"details": [],
"max_points": 13.5
},
{
"key": "issue_template",
"name": "Issue template",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.2
},
{
"key": "pr_template",
"name": "PR template",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 6.3
}
]
}
],
"description": "Does the project have users, downloads, attention, and a welcoming setup for contributors?"
},
{
"key": "governance",
"band": "good",
"name": "Sustainability & Governance",
"value": 82,
"weight": 0.24,
"metrics": [
{
"key": "maintainer_resilience",
"band": "moderate",
"name": "Maintainer resilience (bus factor)",
"note": null,
"notes": [],
"value": 65,
"inputs": {
"bus_factor": 2,
"contributors_sampled": 24,
"top_contributor_share": 0.289
},
"components": [
{
"key": "bus_factor",
"name": "Bus factor",
"detail": "2 contributor(s) cover half of all commits",
"points": 25.2,
"status": "partial",
"details": [
{
"code": "bus_factor",
"params": {
"count": 2
}
}
],
"max_points": 54
},
{
"key": "commit_distribution",
"name": "Commit distribution",
"detail": "top contributor authored 29% of commits",
"points": 16,
"status": "partial",
"details": [
{
"code": "top_contributor_share",
"params": {
"share": 29
}
}
],
"max_points": 22.5
},
{
"key": "contributor_breadth",
"name": "Contributor breadth",
"detail": "24 contributors",
"points": 13.5,
"status": "met",
"details": [
{
"code": "contributors_sampled",
"params": {
"count": 24
}
}
],
"max_points": 13.5
},
{
"key": "openssf_scorecard_contributors",
"name": "OpenSSF Scorecard: Contributors",
"detail": "project has 26 contributing companies or organizations",
"points": 10,
"status": "met",
"details": [],
"max_points": 10
}
]
},
{
"key": "responsiveness",
"band": "excellent",
"name": "Issue & PR responsiveness",
"note": null,
"notes": [],
"value": 92,
"inputs": {
"merged_prs": 453,
"open_issues": 60,
"closed_issues": 454,
"issue_closed_ratio": 0.883,
"closed_unmerged_prs": 39
},
"components": [
{
"key": "issue_resolution",
"name": "Issue resolution",
"detail": "88% of issues closed",
"points": 41.3,
"status": "partial",
"details": [
{
"code": "issues_closed_share",
"params": {
"share": 88
}
}
],
"max_points": 46.75
},
{
"key": "pr_acceptance",
"name": "PR acceptance",
"detail": "453/492 decided PRs merged",
"points": 35.2,
"status": "partial",
"details": [
{
"code": "decided_prs_merged",
"params": {
"merged": 453,
"decided": 492
}
}
],
"max_points": 38.25
},
{
"key": "openssf_scorecard_code_review",
"name": "OpenSSF Scorecard: Code-Review",
"detail": "all changesets reviewed",
"points": 15,
"status": "met",
"details": [],
"max_points": 15
}
]
},
{
"key": "stewardship",
"band": "good",
"name": "Ownership & stewardship",
"note": null,
"notes": [],
"value": 77,
"inputs": {
"followers": 1007,
"owner_type": "Organization",
"is_verified": null,
"owner_login": "alan-turing-institute",
"public_repos": 657,
"account_age_days": 3762
},
"components": [
{
"key": "ownership_backing",
"name": "Ownership backing",
"detail": "organization-owned",
"points": 30,
"status": "met",
"details": [
{
"code": "owner_organization",
"params": {}
}
],
"max_points": 30
},
{
"key": "verified_domain",
"name": "Verified domain",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 20
},
{
"key": "owner_reach",
"name": "Owner reach",
"detail": "1,007 followers of alan-turing-institute",
"points": 21.6,
"status": "partial",
"details": [
{
"code": "owner_followers",
"params": {
"count": 1007,
"login": "alan-turing-institute"
}
}
],
"max_points": 25
},
{
"key": "track_record",
"name": "Track record",
"detail": "657 public repos, account ~10 yr old",
"points": 25,
"status": "met",
"details": [
{
"code": "public_repos",
"params": {
"count": 657
}
},
{
"code": "account_age_years",
"params": {
"years": 10
}
}
],
"max_points": 25
}
]
},
{
"key": "package_maintenance",
"band": "excellent",
"name": "Package maintenance",
"note": null,
"notes": [],
"value": 100,
"inputs": {
"packages": [
"autoemulate"
],
"ecosystems": "pypi",
"any_deprecated": false,
"min_days_since_publish": 19
},
"components": [
{
"key": "published_resolvable",
"name": "Published & resolvable",
"detail": "1 package(s) on pypi",
"points": 25,
"status": "met",
"details": [
{
"code": "packages_published",
"params": {
"count": 1,
"ecosystems": "pypi"
}
}
],
"max_points": 25
},
{
"key": "publish_recency",
"name": "Publish recency",
"detail": "latest publish 19 days ago",
"points": 35,
"status": "met",
"details": [
{
"code": "publish_recency",
"params": {
"days": 19
}
}
],
"max_points": 35
},
{
"key": "version_history",
"name": "Version history",
"detail": "18 published versions",
"points": 20,
"status": "met",
"details": [
{
"code": "published_versions",
"params": {
"count": 18
}
}
],
"max_points": 20
},
{
"key": "not_deprecated",
"name": "Not deprecated",
"detail": "active, not deprecated or yanked",
"points": 20,
"status": "met",
"details": [
{
"code": "package_not_deprecated",
"params": {}
}
],
"max_points": 20
}
]
}
],
"description": "Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?"
},
{
"key": "engineering",
"band": "excellent",
"name": "Engineering Quality",
"value": 90,
"weight": 0.2,
"metrics": [
{
"key": "engineering_practices",
"band": "excellent",
"name": "Engineering practices",
"note": null,
"notes": [],
"value": 94,
"inputs": {
"has_ci": true,
"has_tests": true,
"has_editorconfig": false,
"has_linter_config": true,
"has_precommit_config": true
},
"components": [
{
"key": "ci_workflows",
"name": "CI workflows",
"detail": "5 workflow(s)",
"points": 24,
"status": "met",
"details": [
{
"code": "ci_workflows",
"params": {
"count": 5
}
}
],
"max_points": 24
},
{
"key": "tests_present",
"name": "Tests present",
"detail": null,
"points": 24,
"status": "met",
"details": [],
"max_points": 24
},
{
"key": "linter_config",
"name": "Linter config",
"detail": null,
"points": 16,
"status": "met",
"details": [],
"max_points": 16
},
{
"key": "pre_commit_hooks",
"name": "Pre-commit hooks",
"detail": null,
"points": 9.6,
"status": "met",
"details": [],
"max_points": 9.6
},
{
"key": "editorconfig",
"name": ".editorconfig",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 6.4
},
{
"key": "openssf_scorecard_ci_tests",
"name": "OpenSSF Scorecard: CI-Tests",
"detail": "9 out of 9 merged PRs checked by a CI test -- score normalized to 10",
"points": 20,
"status": "met",
"details": [],
"max_points": 20
}
]
},
{
"key": "documentation",
"band": "excellent",
"name": "Documentation",
"note": null,
"notes": [],
"value": 85,
"inputs": {
"topics": [
"hut23",
"hut23-1468",
"emulation",
"pytorch",
"active-learning",
"calibration",
"gaussian-processes",
"mcmc",
"sensitivity-analysis",
"uncertainty-quantification",
"ensemble",
"history-matching",
"neural-networks",
"aiphys"
],
"has_wiki": true,
"homepage": null,
"has_readme": true,
"has_docs_dir": true,
"has_description": true
},
"components": [
{
"key": "readme",
"name": "README",
"detail": null,
"points": 30,
"status": "met",
"details": [],
"max_points": 30
},
{
"key": "documentation_directory",
"name": "Documentation directory",
"detail": null,
"points": 25,
"status": "met",
"details": [],
"max_points": 25
},
{
"key": "documentation_homepage_site",
"name": "Documentation / homepage site",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 15
},
{
"key": "repository_description",
"name": "Repository description",
"detail": null,
"points": 10,
"status": "met",
"details": [],
"max_points": 10
},
{
"key": "topics",
"name": "Topics",
"detail": "14 topics",
"points": 10,
"status": "met",
"details": [
{
"code": "topics_count",
"params": {
"count": 14
}
}
],
"max_points": 10
},
{
"key": "wiki",
"name": "Wiki",
"detail": null,
"points": 10,
"status": "met",
"details": [],
"max_points": 10
}
]
}
],
"description": "Are baseline engineering and documentation practices in place?"
},
{
"key": "security",
"band": "moderate",
"name": "Security",
"value": 52,
"weight": 0.16,
"metrics": [
{
"key": "security_posture",
"band": "at_risk",
"name": "Security posture",
"note": "Excluded from scoring (no data or not applicable): Branch-Protection, Packaging, Signed-Releases. Remaining weights renormalized.",
"notes": [
{
"code": "excluded_no_data",
"params": {
"components": [
"branch_protection",
"packaging",
"signed_releases"
]
}
},
{
"code": "weights_renormalized",
"params": {}
}
],
"value": 47,
"inputs": {
"source": "openssf_scorecard",
"checks_evaluated": 15,
"scorecard_version": "v5.5.0",
"checks_inconclusive": 3,
"scorecard_aggregate": 4.7
},
"components": [
{
"key": "binary_artifacts",
"name": "Binary-Artifacts",
"detail": "no binaries found in the repo",
"points": 7.5,
"status": "met",
"details": [],
"max_points": 7.5
},
{
"key": "branch_protection",
"name": "Branch-Protection",
"detail": "internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md",
"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
"params": {}
}
],
"max_points": 7.5
},
{
"key": "ci_tests",
"name": "CI-Tests",
"detail": "9 out of 9 merged PRs checked by a CI test -- score normalized to 10",
"points": 2.5,
"status": "met",
"details": [],
"max_points": 2.5
},
{
"key": "cii_best_practices",
"name": "CII-Best-Practices",
"detail": "no effort to earn an OpenSSF best practices badge detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 2.5
},
{
"key": "code_review",
"name": "Code-Review",
"detail": "all changesets reviewed",
"points": 7.5,
"status": "met",
"details": [],
"max_points": 7.5
},
{
"key": "contributors",
"name": "Contributors",
"detail": "project has 26 contributing companies or organizations",
"points": 2.5,
"status": "met",
"details": [],
"max_points": 2.5
},
{
"key": "dangerous_workflow",
"name": "Dangerous-Workflow",
"detail": "no dangerous workflow patterns detected",
"points": 10,
"status": "met",
"details": [],
"max_points": 10
},
{
"key": "dependency_update_tool",
"name": "Dependency-Update-Tool",
"detail": "no update tool detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
},
{
"key": "fuzzing",
"name": "Fuzzing",
"detail": "project is not fuzzed",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "license",
"name": "License",
"detail": "license file detected",
"points": 2.5,
"status": "met",
"details": [],
"max_points": 2.5
},
{
"key": "maintained",
"name": "Maintained",
"detail": "30 commit(s) and 15 issue activity found in the last 90 days -- score normalized to 10",
"points": 7.5,
"status": "met",
"details": [],
"max_points": 7.5
},
{
"key": "packaging",
"name": "Packaging",
"detail": "packaging workflow not detected",
"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
"params": {}
}
],
"max_points": 5
},
{
"key": "pinned_dependencies",
"name": "Pinned-Dependencies",
"detail": "dependency not pinned by hash detected -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "sast",
"name": "SAST",
"detail": "SAST tool is not run on all commits -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "security_policy",
"name": "Security-Policy",
"detail": "security policy file not detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "signed_releases",
"name": "Signed-Releases",
"detail": "no releases found",
"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
"params": {}
}
],
"max_points": 7.5
},
{
"key": "token_permissions",
"name": "Token-Permissions",
"detail": "detected GitHub workflow tokens with excessive permissions",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
},
{
"key": "vulnerabilities",
"name": "Vulnerabilities",
"detail": "109 existing vulnerabilities detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
}
]
},
{
"key": "dependency_advisories",
"band": "good",
"name": "Dependency advisories",
"note": "Matched the pypi:autoemulate@2.1.2 runtime dependency closure — what installing the published package pulls in — 172 packages. Reachability is not analyzed.",
"notes": [
{
"code": "advisories_scope_published",
"params": {
"package": "pypi:autoemulate@2.1.2",
"assessed": 172
}
},
{
"code": "advisories_reachability",
"params": {}
}
],
"value": 70,
"inputs": {
"source": "osv",
"advisories": 8,
"affected_packages": 2,
"assessed_packages": 172,
"unassessed_packages": 0,
"affected_by_severity": "high 2",
"direct_affected_packages": 0
},
"components": [
{
"key": "direct_dependencies_free_of_known_advisories",
"name": "Direct dependencies free of known advisories",
"detail": "no direct dependency carries a known advisory",
"points": 35,
"status": "met",
"details": [
{
"code": "no_direct_advisories",
"params": {}
}
],
"max_points": 35
},
{
"key": "indirect_dependencies_free_of_known_advisories",
"name": "Indirect dependencies free of known advisories",
"detail": "2 affected: setuptools 68.0.0 (high 8.8), wheel 0.41.0 (high 7.1)",
"points": 6.3,
"status": "partial",
"details": [
{
"code": "advisories_affected",
"params": {
"count": 2,
"packages": "setuptools 68.0.0 (high 8.8), wheel 0.41.0 (high 7.1)"
}
}
],
"max_points": 25
},
{
"key": "no_advisories_left_outstanding",
"name": "No advisories left outstanding",
"detail": "2 advisory-carrying package(s) unaddressed past 90 days; oldest published 741 days ago",
"points": 28.6,
"status": "partial",
"details": [
{
"code": "advisories_stale",
"params": {
"days": 90,
"count": 2,
"oldest": 741
}
}
],
"max_points": 40
}
]
},
{
"key": "malicious_dependencies",
"band": "excellent",
"name": "Malicious dependencies",
"note": null,
"notes": [],
"value": 100,
"inputs": {
"source": "osv",
"meaning": "reported as a malicious package by the OpenSSF corpus; the remedy is removal or moving off the compromised name, never an upgrade of the same artifact. Versions the registry has since pulled are listed but not scored",
"packages": [],
"red_flag": false,
"assessed_packages": 172,
"malicious_packages": 0,
"direct_malicious_packages": 0,
"withdrawn_malicious_packages": 0,
"installable_malicious_packages": 0
},
"components": [
{
"key": "no_dependency_reported_as_a_malicious_package",
"name": "No dependency reported as a malicious package",
"detail": "no dependency is reported as a malicious package",
"points": 100,
"status": "met",
"details": [
{
"code": "no_malicious_dependencies",
"params": {}
}
],
"max_points": 100
}
]
},
{
"key": "high_risk_jurisdiction_exposure",
"band": "excellent",
"name": "High-Risk Jurisdiction Exposure",
"note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
"notes": [
{
"code": "jurisdiction_evidence_limits",
"params": {}
}
],
"value": 100,
"inputs": {
"meaning": "self-published location evidence; not nationality or citizenship",
"red_flag": false,
"exposures": [],
"policy_countries": [
"Russia",
"Iran",
"North Korea"
],
"review_only_matches": 0,
"assessed_self_published_locations": 10
},
"components": [
{
"key": "policy_exposure_multiplier",
"name": "Policy exposure multiplier",
"detail": "no confirmed policy-scope location match",
"points": 100,
"status": "met",
"details": [
{
"code": "jurisdiction_no_match",
"params": {}
}
],
"max_points": 100
}
]
}
],
"description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
},
{
"key": "ai_readiness",
"band": "moderate",
"name": "AI Readiness",
"value": 53,
"weight": 0,
"metrics": [
{
"key": "ai_agent_context",
"band": "good",
"name": "Agent context & guidance",
"note": null,
"notes": [],
"value": 70,
"inputs": {
"has_llms_txt": false,
"legible_history_share": 0.466,
"agent_instruction_files": [
"AGENTS.md"
],
"agent_instruction_max_bytes": 4030
},
"components": [
{
"key": "agent_instructions",
"name": "Agent instructions",
"detail": "AGENTS.md",
"points": 45,
"status": "met",
"details": [
{
"code": "file_list",
"params": {
"files": "AGENTS.md"
}
}
],
"max_points": 45
},
{
"key": "machine_readable_docs_llms_txt",
"name": "Machine-readable docs (llms.txt)",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 15
},
{
"key": "legible_commit_history",
"name": "Legible commit history",
"detail": "41 of 88 human commits state their intent (structured subject or explanatory body)",
"points": 24.8,
"status": "partial",
"details": [
{
"code": "legible_history",
"params": {
"legible": 41,
"sampled": 88
}
}
],
"max_points": 40
}
]
},
{
"key": "ai_verify_loop",
"band": "at_risk",
"name": "Verify loop (build / test / typecheck)",
"note": null,
"notes": [],
"value": 45,
"inputs": {
"has_nix": false,
"has_tests": true,
"lockfiles": [
"uv.lock"
],
"has_dockerfile": false,
"typed_language": false,
"bootstrap_files": [],
"has_devcontainer": false,
"has_linter_config": true,
"typecheck_configs": [],
"agent_commit_share": 0.01,
"toolchain_manifests": [],
"dependency_bot_commit_share": 0
},
"components": [
{
"key": "one_command_bootstrap",
"name": "One-command bootstrap",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 18
},
{
"key": "automated_tests",
"name": "Automated tests",
"detail": null,
"points": 22,
"status": "met",
"details": [],
"max_points": 22
},
{
"key": "lint_format_config",
"name": "Lint / format config",
"detail": null,
"points": 11,
"status": "met",
"details": [],
"max_points": 11
},
{
"key": "static_type_checking",
"name": "Static type checking",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 11
},
{
"key": "reproducible_environment",
"name": "Reproducible environment",
"detail": "lockfile",
"points": 10,
"status": "met",
"details": [
{
"code": "file_list",
"params": {
"files": "lockfile"
}
}
],
"max_points": 10
},
{
"key": "demonstrated_agent_practice",
"name": "Demonstrated agent practice",
"detail": "1 of the last 100 commits agent-authored or agent-credited",
"points": 2,
"status": "partial",
"details": [
{
"code": "agent_authored_commits",
"params": {
"count": 1,
"sampled": 100
}
}
],
"max_points": 10
},
{
"key": "automated_maintenance",
"name": "Automated maintenance",
"detail": "no automated dependency updates observed",
"points": 0,
"status": "missed",
"details": [
{
"code": "no_dependency_automation",
"params": {}
}
],
"max_points": 8
},
{
"key": "openssf_scorecard_pinned_dependencies",
"name": "OpenSSF Scorecard: Pinned-Dependencies",
"detail": "dependency not pinned by hash detected -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 10
}
]
},
{
"key": "ai_code_legibility",
"band": "moderate",
"name": "Code legibility for models",
"note": null,
"notes": [],
"value": 55,
"inputs": {
"primary_language": "Python",
"largest_source_bytes": 50214,
"source_files_sampled": 113,
"oversized_source_files": 0
},
"components": [
{
"key": "type_checkable_code",
"name": "Type-checkable code",
"detail": "Python without a type-check config",
"points": 0,
"status": "missed",
"details": [
{
"code": "no_typecheck_config_language",
"params": {
"language": "Python"
}
}
],
"max_points": 45
},
{
"key": "manageable_file_sizes",
"name": "Manageable file sizes",
"detail": "0/113 source files over 60KB",
"points": 55,
"status": "met",
"details": [
{
"code": "oversized_source_files",
"params": {
"kb": 60,
"sampled": 113,
"oversized": 0
}
}
],
"max_points": 55
}
]
},
{
"key": "ai_interfaces",
"band": "at_risk",
"name": "Machine-readable interfaces",
"note": null,
"notes": [],
"value": 40,
"inputs": {
"example_dirs": [
"notebooks"
],
"has_mcp_signal": false,
"api_schema_files": []
},
"components": [
{
"key": "api_schema_openapi_graphql_proto",
"name": "API schema (OpenAPI/GraphQL/proto)",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 40
},
{
"key": "mcp_server",
"name": "MCP server",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 20
},
{
"key": "runnable_examples",
"name": "Runnable examples",
"detail": "notebooks",
"points": 40,
"status": "met",
"details": [
{
"code": "file_list",
"params": {
"files": "notebooks"
}
}
],
"max_points": 40
}
]
}
],
"description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
}
],
"metrics_version": "1.13.0"
},
"warnings": [
"Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token"
],
"report_type": "repository",
"generated_at": "2026-07-26T08:34:53.961088Z",
"schema_version": "0.27.0",
"badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/a/alan-turing-institute/autoemulate.svg",
"full_name": "alan-turing-institute/autoemulate",
"license_state": "standard",
"license_spdx": "MIT"
}Scores are signals, not warranties. They reflect publicly visible practices on GitHub — not a code audit, and not a security guarantee.
Missing data is excluded and weights renormalized, never scored as zero. Methodology is versioned and open: metrics v1.13.0, schema v0.27.0 — full methodology · metrics wiki.
How one result sits in the wider record: aggregate statistics — PyPI.