Public record
Software health reportschema 0.11.0 · metrics 2.10.0 · 2026-07-15 12:15 UTC

ppillot / biomsalign

JavaScript library for Multiple Sequence Alignment

TypeScriptMIT★ 26 stars⑂ 0 forkssince Jan 2021View on GitHub ↗
KindLibraryhow this is determined
#alignment#minimizer#sequence-alignment#bioinformatics#javascript

ppillot/biomsalign holds a health index of 31 out of 100, placing it in the At Risk band. It scores highest on Engineering Quality (53/100) and lowest on Vitality (17/100). It was last updated 920 days ago. A single contributor accounts for most of its recent work.

31
overall / 100
At Risk

Software health index

Metrics are grouped into weighted categories on one standardized 1–100 scale. Overall starts as their weighted mean, calibrated against the distribution of the public record so bands carry percentile meaning; when public evidence triggers the High-Risk Jurisdiction Policy, the rating is adjusted and receives an At Risk ceiling of 34.

31
Exceptional93-100The record's top tier (≈ top 5%); essentially all checked criteria met
Excellent80-92Strong across the board; minor gaps
Good65-79Healthy; gaps are limited and manageable
Moderate50-64Acceptable with notable gaps; review recommended
Weak35-49Material weaknesses across several areas
At Risk20-34Significant weaknesses; adoption warrants caution
Critical1-19Severe problems (abandoned, single-maintainer, no hygiene)
VitalityCommunity &AdoptionSustainability &GovernanceEngineeringQualitySecurityAI Readiness

Score profile

Each axis is a category. The shape matters more than the average — a healthy subject fills the whole shape, while a spike-and-crater profile means strength in one dimension is masking risk in another.

The weighted overall 37 is calibrated to 31 on the published index scale (record calibration 2026-08-02).

Ownership

Paul PillotPersonal account
7 followers16 public repossince Mar 2013

This repository is owned by a personal account. A single-owner project carries more continuity risk than an organization-backed one.

Package ecosystems

RegistryPackageVersionDownloads / moVersionsLast publishTags
npmbiomsa0.3.323,04113920 days agosequencealignmentdnaproteinclustalmultipleminimizer

Metrics by category

Vitality

Is the project alive — is code being written and are releases shipping?

17Critical · 21% of overall

Development activity

1Critical
How it's scored
0/36Push recency — last push 920 days ago
0/36Commit cadence — 0/52 weeks with commits
0/18Commit volume — 0 commits in the last year
0/10OpenSSF Scorecard: Maintained — 0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
Inputs used
commits_last_year0
human_commit_share—
days_since_last_push920
active_weeks_last_year0

Release discipline

40Weak
How it's scored
27/27Ships releases — 7 releases published
0/36Release recency — latest release 920 days ago
12.6/27Release cadence — a release every ~143.4 days
0/10OpenSSF Scorecard: Signed-Releases — Project has not signed or included provenance with any releases.
Inputs used
releases_count7
latest_release_tagv0.3.3
releases_from_tagsno
days_since_latest_release920
mean_days_between_releases143.4

Community & Adoption

Does the project have users, downloads, attention, and a welcoming setup for contributors?

36Weak · 17% of overall

Popularity & adoption

23At Risk
How it's scored
22.7/60Stars — 26 stars
0/25Forks — 0 forks
0/15Watchers — 1 watchers
Inputs used
forks0
stars26
watchers1
growth_stateunverified
growth_factor_pct100
growth_unverified_reasonno_history

Community health

50Moderate
How it's scored
22.5/22.5README
22.5/22.5License — recognized license (MIT)
0/18CONTRIBUTING guide
0/13.5Code of conduct
0/7.2Issue template
0/6.3PR template
Inputs used
has_readmeyes
has_licenseyes
readme_badges—
has_contributingno
has_issue_templateno
has_code_of_conductno
readme_badge_services—
has_pull_request_templateno

Sustainability & Governance

Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?

44Weak · 23% of overall

Maintainer resilience (bus factor)

10Critical
How it's scored
9/54Bus factor — 1 contributor(s) cover half of all commits
0/22.5Commit distribution — top contributor authored 100% of commits
1.4/13.5Contributor breadth — 1 contributors
0/10OpenSSF Scorecard: Contributors — project has 0 contributing companies or organizations -- score normalized to 0
Inputs used
bus_factor1
contributors_sampled1
top_contributor_share1

Issue & PR responsiveness

63Moderate
How it's scored
25.2/42Issue resolution — 60% of issues closed
30/30PR acceptance — 4/4 decided PRs merged
0/13Newcomer PR acceptance — no first-time contributor's PR decided in 30d
0/15OpenSSF Scorecard: Code-Review — Found 0/16 approved changesets -- score normalized to 0
Inputs used
merged_prs4
open_issues2
closed_issues3
prs_merged_7d—
prs_decided_7d—
prs_merged_30d—
prs_decided_30d—
issue_closed_ratio0.6
closed_unmerged_prs0
first_time_authors_30d—
first_time_prs_merged_30d—
first_time_prs_decided_30d—
Excluded from scoring (no data or not applicable): Newcomer PR acceptance. Remaining weights renormalized.

Ownership & stewardship

47Weak
How it's scored
10/30Ownership backing — personal (user) account
0/20Verified domain — not applicable to user accounts
6.5/25Owner reach — 7 followers of ppillot
21/25Track record — 16 public repos, account ~13 yr old
Inputs used
followers7
owner_typeUser
is_verified—
owner_loginppillot
public_repos16
account_age_days4,864
Excluded from scoring (no data or not applicable): Verified domain. Remaining weights renormalized.

Package maintenance

69Good
How it's scored
25/25Published & resolvable — 1 package(s) on npm
4/35Publish recency — latest publish 920 days ago
20/20Version history — 13 published versions
20/20Not deprecated — active, not deprecated or yanked
Inputs used
packagesbiomsa
ecosystemsnpm
any_deprecatedno
min_days_since_publish920

Engineering Quality

Are baseline engineering and documentation practices in place?

53Moderate · 19% of overall

Engineering practices

48Weak
How it's scored
24/24CI workflows — 1 workflow(s)
24/24Tests present
0/16Linter config
0/9.6Pre-commit hooks
0/6.4.editorconfig
0/20OpenSSF Scorecard: CI-Tests — 0 out of 4 merged PRs checked by a CI test -- score normalized to 0
Inputs used
has_ciyes
has_testsyes
has_editorconfigno
has_linter_configno
has_precommit_configno

Documentation

60Moderate
How it's scored
30/30README
0/25Documentation directory
0/15Documentation / homepage site
10/10Repository description
10/10Topics — 5 topics
10/10Wiki
Inputs used
topicsalignment, minimizer, sequence-alignment, bioinformatics, javascript
has_wikiyes
homepage—
docs_site—
has_readmeyes
has_docs_dirno
has_descriptionyes

Security

Are visible security and supply-chain practices strong, without unresolved high-risk jurisdiction exposure?

30At Risk · 16% of overall

Security posture

30At Risk
How it's scored
7.5/7.5Binary-Artifacts — no binaries found in the repo
0/7.5Branch-Protection — branch protection not enabled on development/release branches
0/2.5CI-Tests — 0 out of 4 merged PRs checked by a CI test -- score normalized to 0
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
0/7.5Code-Review — Found 0/16 approved changesets -- score normalized to 0
0/2.5Contributors — project has 0 contributing companies or organizations -- score normalized to 0
10/10Dangerous-Workflow — no dangerous workflow patterns detected
0/7.5Dependency-Update-Tool — no update tool detected
0/5Fuzzing — project is not fuzzed
2.5/2.5License — license file detected
0/7.5Maintained — 0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
0/5Packaging — no data
0/5Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
3.5/5SAST — SAST tool detected but not run on all commits
0/5Security-Policy — security policy file not detected
0/7.5Signed-Releases — Project has not signed or included provenance with any releases.
6.8/7.5Token-Permissions — detected GitHub workflow tokens with excessive permissions
0/7.5Vulnerabilities — 19 existing vulnerabilities detected
Inputs used
sourceopenssf_scorecard
checks_evaluated17
scorecard_versionv5.5.0
checks_inconclusive1
scorecard_aggregate3
Excluded from scoring (no data or not applicable): Packaging. Remaining weights renormalized.

AI Readiness

How well is the repo equipped to be developed and maintained with AI coding agents? Carries a deliberately small weight (4%): agent tooling is a real maintenance signal, but a repository with none can still reach 100/100.

51Moderate · 4% of overall

Agent context & guidance

1Critical
How it's scored
0/45Agent instructions — no CLAUDE.md / AGENTS.md / editor rules
0/15Machine-readable docs (llms.txt)
0/40Legible commit history — no data
Inputs used
has_llms_txtno
llms_txt_url—
legible_history_share—
agent_instruction_files—
agent_instruction_max_bytes—
Excluded from scoring (no data or not applicable): Legible commit history. Remaining weights renormalized.

Verify loop (build / test / typecheck)

52Moderate
How it's scored
0/18One-command bootstrap
22/22Automated tests
0/11Lint / format config
11/11Static type checking — tsconfig.json
10/10Reproducible environment — lockfile
0/10Demonstrated agent practice — no data
0/8Automated maintenance — no data
0/10OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
Inputs used
has_nixno
has_testsyes
lockfilespackage-lock.json
has_dockerfileno
typed_languageyes
bootstrap_files—
has_devcontainerno
has_linter_configno
typecheck_configstsconfig.json
agent_commit_share—
toolchain_manifests—
dependency_bot_commit_share—
Excluded from scoring (no data or not applicable): Demonstrated agent practice, Automated maintenance. Remaining weights renormalized.

Code legibility for models

98Exceptional
How it's scored
45/45Type-checkable code — TypeScript (statically typed)
52.5/55Manageable file sizes — 1/22 source files over 60KB
Inputs used
primary_languageTypeScript
largest_source_bytes92,629
source_files_sampled22
oversized_source_files1

Machine-readable interfaces

100Exceptional
How it's scored
0/40API schema (OpenAPI/GraphQL/proto) — not applicable to this kind of software
0/20MCP server — not applicable to this kind of software
40/40Runnable examples — examples
Inputs used
example_dirsexamples
has_mcp_signalno
api_schema_files—
interfaces_expected_of—
Excluded from scoring (no data or not applicable): API schema (OpenAPI/GraphQL/proto), MCP server. Remaining weights renormalized.

Key facts

26GitHub stars
1contributors
0commits, last 12 months
920days since last push
7releases
1bus factor
2open issues
npmpackage ecosystems

More detail

OpenSSF Scorecard 3.0 / 10
3.0aggregate

Independent, tool-agnostic security assessment from the open-source OpenSSF Scorecard. Each check rewards a security practice, not a specific vendor's tool. Checks Scorecard could not determine are marked n/a and excluded from the security score (never counted as zero).Scorecard v5.5.0 · 2026-07-15 12:15 UTC

10Binary-Artifactsno binaries found in the repo
0Branch-Protectionbranch protection not enabled on development/release branches
0CI-Tests0 out of 4 merged PRs checked by a CI test -- score normalized to 0
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
0Code-ReviewFound 0/16 approved changesets -- score normalized to 0
0Contributorsproject has 0 contributing companies or organizations -- score normalized to 0
10Dangerous-Workflowno dangerous workflow patterns detected
0Dependency-Update-Toolno update tool detected
0Fuzzingproject is not fuzzed
10Licenselicense file detected
0Maintained0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
n/aPackagingpackaging workflow not detected
0Pinned-Dependenciesdependency not pinned by hash detected -- score normalized to 0
7SASTSAST tool detected but not run on all commits
0Security-Policysecurity policy file not detected
0Signed-ReleasesProject has not signed or included provenance with any releases.
9Token-Permissionsdetected GitHub workflow tokens with excessive permissions
0Vulnerabilities19 existing vulnerabilities detected
All dependencies 319

Full resolved dependency set from the GitHub dependency graph: 0 direct and 319 indirect (transitive) packages. The transitive closure is complete when the repository commits a lockfile.

RegistryPackageVersionRelation
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npmstrip-ansi6.0.1indirect
npmstrip-bom4.0.0indirect
npmstrip-final-newline2.0.0indirect
npmstrip-json-comments3.1.1indirect
npmsupports-color5.5.0indirect
npmsupports-color7.2.0indirect
npmsupports-color8.1.1indirect
npmsupports-preserve-symlinks-flag1.0.0indirect
npmterser5.26.0indirect
npmtest-exclude6.0.0indirect
npmtmpl1.0.5indirect
npmto-fast-properties2.0.0indirect
npmto-regex-range5.0.1indirect
npmts-jest29.1.1indirect
npmtslib2.3.1indirect
npmtype-detect4.0.8indirect
npmtype-fest0.21.3indirect
npmtypescript5.3.3indirect
npmupdate-browserslist-db1.0.13indirect
npmv8-to-istanbul9.2.0indirect
npmwalker1.0.8indirect
npmwhich2.0.2indirect
npmwrap-ansi7.0.0indirect
npmwrappy1.0.2indirect
npmwrite-file-atomic4.0.2indirect
npmy18n5.0.8indirect
npmyallist3.1.1indirect
npmyallist4.0.0indirect
npmyargs17.7.2indirect
npmyargs-parser21.1.1indirect
npmyocto-queue0.1.0indirect
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Scores are signals, not warranties. They reflect publicly visible practices on GitHub — not a code audit, and not a security guarantee.

Missing data is excluded and weights renormalized, never scored as zero. Methodology is versioned and open: metrics v2.10.0, schema v0.11.0 — full methodology · metrics wiki.

How one result sits in the wider record: aggregate statistics — npm.