npm
nvuillam/npm-groovy-lint
Lint, format and auto-fix your Groovy / Jenkinsfile / Gradle files using command line
MITSep 15, 2026 · metrics 2.10.0
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Catalogue tag
#nextflow
Every repository in the public record carrying this tag — from its GitHub topics or the keywords its package registries publish. Health is measured under the same versioned methodology as the rest of the record.
7 records
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EBI-Metagenomics/assembly-analysis-pipeline
MGnify Assembly Analysis Pipeline
Apache-2.0Sep 11, 2026 · metrics 2.10.0
PyPI
CDCgov/tostadas
🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission
Apache-2.0Sep 11, 2026 · metrics 2.10.0
PyPI · npm
haqaliz/contig
An agentic bioinformatics analyst: it runs the analysis on your own compute, self-heals failures, verifies the output, and returns a reproducible result.
Apache-2.0Sep 5, 2026 · metrics 2.10.0
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bactopia/bactopia
A flexible pipeline for complete analysis of bacterial genomes
MITOct 19, 2026 · metrics 2.10.0
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edmundmiller/nextflow-mode
Emacs major mode for Nextflow
GPL-3.0Oct 18, 2026 · metrics 2.10.0
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beiko-lab/arete
AMR/VF LGT focused bacterial genomics analysis workflow
MITSep 10, 2026 · metrics 2.10.0