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Software-GesundheitsberichtSchema 0.11.0 · Metriken 1.13.0 · 2026-07-15 12:10 UTC

haddocking / protein-quest

Python package to search/retrieve/filter proteins and protein structures

PythonApache-2.0★ 5 Sterne⑂ 0 Forksseit Aug. 2025Auf GitHub ansehen ↗

haddocking/protein-quest erreicht einen Gesundheitsindex von 69 von 100 und liegt damit im Bereich Mittel. Am stärksten schneidet es bei Vitality (94/100) ab, am schwächsten bei Community & Adoption (45/100). Zuletzt vor 1 Tag aktualisiert. Ein einzelner Mitwirkender trägt den Großteil der jüngsten Arbeit.

69
gesamt / 100
Mittel

Software-Gesundheitsindex

Metriken werden auf einer Skala von 1–100 in gewichtete Kategorien gruppiert. Der Gesamtwert beginnt als ihr Mittel; sobald öffentliche Evidenz die Richtlinie für Hochrisikojurisdiktionen auslöst, wird die Bewertung angepasst und erhält die Obergrenze 49 (Gefährdet). AI Readiness liegt außerhalb.

69
Exzellent85-100Vorbildlich; erfüllt im Wesentlichen alle geprüften Kriterien
Gut70-84Gesund; geringfügige Lücken
Mittel50-69Akzeptabel mit deutlichen Lücken; Überprüfung empfohlen
Gefährdet30-49Erhebliche Schwächen; eine Übernahme erfordert Vorsicht
Kritisch1-29Schwerwiegende Probleme (aufgegeben, nur ein Maintainer, keine Hygiene)
VitalitätCommunity &VerbreitungNachhaltigkeit &GovernanceEngineering-QualitätSicherheitAI Readiness

Bewertungsprofil

Jede Achse ist eine Kategorie. Die Form zählt mehr als der Durchschnitt — ein gesundes Projekt füllt die gesamte Fläche, während ein Profil aus Spitzen und Kratern bedeutet, dass Stärke in einer Dimension Risiken in einer anderen verdeckt.

Eigentümerschaft

HADDOCKOrganisation
225 Follower75 öffentliche Reposseit Okt. 2013

Dieses Repository wird von einer Organisation getragen — geteilte, rechenschaftspflichtige Trägerschaft, die jeden einzelnen Maintainer überdauern kann.

Paket-Ökosysteme

RegistryPaketVersionDownloads / MonatVersionenZuletzt veröffentlichtTags
PyPIprotein_quest1.5.0-20vor 2 Tagenalphafoldmmcifpdbproteinprotein-structureuniprot

Metriken nach Kategorie

Vitalität

Lebt das Projekt — wird Code geschrieben und werden Releases ausgeliefert?

94Exzellent · 22 % des Gesamtindex
Wie die Bewertung erfolgt
36/36Push-Aktualität — letzter Push vor 1 Tagen
25.6/36Commit-Rhythmus — 37/52 Wochen mit Commits
18/18Commit-Volumen — 677 Commits im letzten Jahr
10/10OpenSSF Scorecard: Maintained — 30 commit(s) and 14 issue activity found in the last 90 days -- score normalized to 10
Verwendete Eingangsdaten
commits_last_year677
human_commit_share
days_since_last_push1
active_weeks_last_year37

Release-Disziplin

100Exzellent
Wie die Bewertung erfolgt
27/27Liefert Releases aus — 20 Releases veröffentlicht
36/36Release-Aktualität — letztes Release vor 2 Tagen
27/27Release-Rhythmus — ein Release etwa alle 27,1 Tage
0/10OpenSSF Scorecard: Signed-Releases — keine Daten
Verwendete Eingangsdaten
releases_count20
latest_release_tagv1.5.0
releases_from_tagsnein
days_since_latest_release2
mean_days_between_releases27,1
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): OpenSSF Scorecard: Signed-Releases. Die verbleibenden Gewichte wurden renormalisiert.

Community & Verbreitung

Hat das Projekt Nutzer, Downloads, Aufmerksamkeit und ein einladendes Umfeld für Beitragende?

45Gefährdet · 18 % des Gesamtindex
Wie die Bewertung erfolgt
9.8/60Stars — 5 Stars
0/25Forks — 0 Forks
0/15Watcher — 1 Watcher
Verwendete Eingangsdaten
forks0
stars5
watchers1
growth_stateunverified
growth_factor_pct100
growth_unverified_reasonno_history
Wie die Bewertung erfolgt
22.5/22.5README
22.5/22.5Lizenz — anerkannte Lizenz (Apache-2.0)
18/18CONTRIBUTING-Leitfaden
13.5/13.5Verhaltenskodex
0/7.2Issue-Vorlage
0/6.3PR-Vorlage
Verwendete Eingangsdaten
has_readmeja
has_licenseja
has_contributingja
has_issue_templatenein
has_code_of_conductja
has_pull_request_templatenein

Nachhaltigkeit & Governance

Überdauert das Projekt die Menschen, die es tragen — Bus-Faktor, Reaktionsfähigkeit, Trägerschaft und Paketpflege?

64Mittel · 24 % des Gesamtindex
Wie die Bewertung erfolgt
9/54Bus-Faktor — 1 Beitragende decken die Hälfte aller Commits ab
0.2/22.5Commit-Verteilung — wichtigste beitragende Person verfasste 99 % der Commits
4.1/13.5Breite der Beitragenden — 3 Beitragende
10/10OpenSSF Scorecard: Contributors — project has 18 contributing companies or organizations
Verwendete Eingangsdaten
bus_factor1
contributors_sampled3
top_contributor_share0,993
Wie die Bewertung erfolgt
38/46.8Issue-Lösungsquote — 81 % der Issues geschlossen
36.8/38.3PR-Annahme — 78/81 entschiedene PRs gemergt
0/15OpenSSF Scorecard: Code-Review — Found 0/3 approved changesets -- score normalized to 0
Verwendete Eingangsdaten
merged_prs78
open_issues9
closed_issues39
issue_closed_ratio0,812
closed_unmerged_prs3
Wie die Bewertung erfolgt
30/30Organisatorische Trägerschaft — im Besitz einer Organisation
0/20Verifizierte Domain
16.9/25Reichweite des Inhabers — 225 Follower von haddocking
25/25Kontohistorie — 75 öffentliche Repos, Kontoalter ca. 12 Jahre
Verwendete Eingangsdaten
followers225
owner_typeOrganization
is_verified
owner_loginhaddocking
public_repos75
account_age_days4.663

Paketpflege

100Exzellent
Wie die Bewertung erfolgt
25/25Veröffentlicht & auflösbar — 1 Paket(e) auf pypi
35/35Veröffentlichungsaktualität — letzte Veröffentlichung vor 2 Tagen
20/20Versionshistorie — 20 veröffentlichte Versionen
20/20Nicht veraltet — aktiv, nicht veraltet oder zurückgezogen
Verwendete Eingangsdaten
packagesprotein_quest
ecosystemspypi
any_deprecatednein
min_days_since_publish2

Engineering-Qualität

Sind grundlegende Engineering- und Dokumentationspraktiken vorhanden?

88Exzellent · 20 % des Gesamtindex
Wie die Bewertung erfolgt
24/24CI-Workflows — 4 Workflow(s)
24/24Tests vorhanden
16/16Linter-Konfiguration
9.6/9.6Pre-Commit-Hooks
0/6.4.editorconfig
20/20OpenSSF Scorecard: CI-Tests — 3 out of 3 merged PRs checked by a CI test -- score normalized to 10
Verwendete Eingangsdaten
has_cija
has_testsja
has_editorconfignein
has_linter_configja
has_precommit_configja
Wie die Bewertung erfolgt
30/30README
25/25Dokumentationsverzeichnis
15/15Dokumentations-/Homepage-Site — http://www.bonvinlab.org/protein-quest/
10/10Repository-Beschreibung
0/10Topics
0/10Wiki
Verwendete Eingangsdaten
topics
has_wikinein
homepagehttp://www.bonvinlab.org/protein-quest/
has_readmeja
has_docs_dirja
has_descriptionja

Sicherheit

Sind die sichtbaren Sicherheits- und Lieferkettenpraktiken belastbar, ohne ungeklärte Exposition gegenüber Hochrisikojurisdiktionen?

48Gefährdet · 16 % des Gesamtindex

Sicherheitslage

48Gefährdet
Wie die Bewertung erfolgt
7.5/7.5Binary-Artifacts — no binaries found in the repo
2.2/7.5Branch-Protection — branch protection is not maximal on development and all release branches
2.5/2.5CI-Tests — 3 out of 3 merged PRs checked by a CI test -- score normalized to 10
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
0/7.5Code-Review — Found 0/3 approved changesets -- score normalized to 0
2.5/2.5Contributors — project has 18 contributing companies or organizations
10/10Dangerous-Workflow — no dangerous workflow patterns detected
0/7.5Dependency-Update-Tool — no update tool detected
0/5Fuzzing — project is not fuzzed
2.5/2.5Lizenz — license file detected
7.5/7.5Maintained — 30 commit(s) and 14 issue activity found in the last 90 days -- score normalized to 10
5/5Packaging — packaging workflow detected
0/5Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
0/5SAST — SAST tool is not run on all commits -- score normalized to 0
0/5Security-Policy — security policy file not detected
0/7.5Signed-Releases — keine Daten
0/7.5Token-Permissions — detected GitHub workflow tokens with excessive permissions
7.5/7.5Vulnerabilities — 0 existing vulnerabilities detected
Verwendete Eingangsdaten
sourceopenssf_scorecard
checks_evaluated17
scorecard_versionv5.5.0
checks_inconclusive1
scorecard_aggregate4,8
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): signed_releases. Die verbleibenden Gewichte wurden renormalisiert.

AI Readiness

Wie gut ist das Repository dafür ausgestattet, mit KI-Coding-Agenten entwickelt und gepflegt zu werden? Ein unabhängiges, experimentelles Badge — Gewicht 0,0, es wird eigenständig ausgewiesen und verändert den Gesamt-Gesundheitswert nicht.

48Gefährdet · 0 % des Gesamtindex
Wie die Bewertung erfolgt
0/45Agentenanweisungen — keine CLAUDE.md / AGENTS.md / Editor-Regeln
0/15Maschinenlesbare Doku (llms.txt)
0/40Lesbare Commit-Historie — keine Daten
Verwendete Eingangsdaten
has_llms_txtnein
legible_history_share
agent_instruction_files
agent_instruction_max_bytes
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): Lesbare Commit-Historie. Die verbleibenden Gewichte wurden renormalisiert.
Wie die Bewertung erfolgt
0/18Bootstrap mit einem Befehl
22/22Automatisierte Tests
11/11Lint-/Format-Konfiguration
11/11Statische Typprüfung — src/protein_quest/py.typed
10/10Reproduzierbare Umgebung — lockfile
0/10Belegte Agentenpraxis — keine Daten
0/8Automatisierte Wartung — keine Daten
0/10OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
Verwendete Eingangsdaten
has_nixnein
has_testsja
lockfilesuv.lock
has_dockerfilenein
typed_languagenein
bootstrap_files
has_devcontainernein
has_linter_configja
typecheck_configssrc/protein_quest/py.typed
agent_commit_share
toolchain_manifests
dependency_bot_commit_share
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): Belegte Agentenpraxis, Automatisierte Wartung. Die verbleibenden Gewichte wurden renormalisiert.
Wie die Bewertung erfolgt
27/45Typprüfbarer Code — Python mit Typprüfungs-Konfiguration (src/protein_quest/py.typed)
55/55Handhabbare Dateigrößen — 0/93 Quelldateien über 60 KB
Verwendete Eingangsdaten
primary_languagePython
largest_source_bytes38.744
source_files_sampled93
oversized_source_files0
Wie die Bewertung erfolgt
0/40API-Schema (OpenAPI/GraphQL/proto)
20/20MCP-Server
40/40Lauffähige Beispiele — notebooks
Verwendete Eingangsdaten
example_dirsnotebooks
has_mcp_signalja
api_schema_files

Eckdaten

5GitHub-Sterne
3Mitwirkende
677Commits, letzte 12 Monate
1Tage seit letztem Push
20Releases
1Bus-Faktor
9offene Issues
PyPIPaket-Ökosysteme

Weitere Details

OpenSSF Scorecard 4.8 / 10
4.8Gesamtwert

Unabhängige, werkzeugneutrale Sicherheitsbewertung durch das quelloffene OpenSSF Scorecard. Jede Prüfung honoriert eine Sicherheits-Praxis, nicht das Werkzeug eines bestimmten Anbieters. Prüfungen, die Scorecard nicht ermitteln konnte, sind mit k. A. markiert und vom Sicherheitswert ausgeschlossen (nie als null gezählt).Scorecard v5.5.0 · 2026-07-15 12:10 UTC

10Binary-Artifactsno binaries found in the repo
3Branch-Protectionbranch protection is not maximal on development and all release branches
10CI-Tests3 out of 3 merged PRs checked by a CI test -- score normalized to 10
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
0Code-ReviewFound 0/3 approved changesets -- score normalized to 0
10Contributorsproject has 18 contributing companies or organizations
10Dangerous-Workflowno dangerous workflow patterns detected
0Dependency-Update-Toolno update tool detected
0Fuzzingproject is not fuzzed
10Licenselicense file detected
10Maintained30 commit(s) and 14 issue activity found in the last 90 days -- score normalized to 10
10Packagingpackaging workflow detected
0Pinned-Dependenciesdependency not pinned by hash detected -- score normalized to 0
0SASTSAST tool is not run on all commits -- score normalized to 0
0Security-Policysecurity policy file not detected
k. A.Signed-Releasesno releases found
0Token-Permissionsdetected GitHub workflow tokens with excessive permissions
10Vulnerabilities0 existing vulnerabilities detected
Direkte Abhängigkeiten 18
RegistryPaketVersionsvorgabeManifest
PyPIaiofiles>=24.1.0pyproject.toml
PyPIaiohttp>=3.13.4pyproject.toml
PyPIaiohttp-retry>=2.9.1pyproject.toml
PyPIattrs>=25.3.0pyproject.toml
PyPIcattrs>=24.1.3pyproject.toml
PyPIdask>=2025.5.1pyproject.toml
PyPIdistributed>=2025.5.1pyproject.toml
PyPIgemmi>=0.7.5pyproject.toml
PyPIpsutil>=7.0.0pyproject.toml
PyPIrich>=14.0.0pyproject.toml
PyPIsparqlwrapper>=2.0.0pyproject.toml
PyPItqdm>=4.67.1pyproject.toml
PyPIyarl>=1.20.1pyproject.toml
PyPIplatformdirs>=4.3.8pyproject.toml
PyPImmcif>=0.92.0pyproject.toml
PyPIrocrate-action-recorder>=0.5.1pyproject.toml
PyPIcyclopts>=4.16.1pyproject.toml
PyPIscipy>=1.17.1pyproject.toml
Alle Abhängigkeiten 195

Vollständig aufgelöster Abhängigkeitssatz aus dem GitHub-Abhängigkeitsgraphen: 18 direkte und 177 indirekte (transitive) Pakete. Die transitive Hülle ist vollständig, wenn das Repository eine Lockfile eincheckt.

RegistryPaketVersionBeziehung
PyPIaiofiles25.1.0direkt
PyPIaiohttp3.14.1direkt
PyPIaiohttp-retry2.9.1direkt
PyPIattrs26.1.0direkt
PyPIcattrs26.1.0direkt
PyPIcyclopts4.21.0direkt
PyPIdask2026.7.0direkt
PyPIdistributed2026.7.0direkt
PyPIgemmi0.7.5direkt
PyPImmcif1.1.1direkt
PyPIplatformdirs4.10.0direkt
PyPIpsutil7.2.2direkt
PyPIrich15.0.0direkt
PyPIrocrate-action-recorder0.5.3direkt
PyPIscipy1.18.0direkt
PyPIsparqlwrapper2.0.0direkt
PyPItqdm4.68.4direkt
PyPIyarl1.24.2direkt
PyPIaiodns4.0.4indirekt
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PyPIaiohappyeyeballs2.7.1indirekt
PyPIaiohttp-compress0.2.1indirekt
PyPIaiosignal1.4.0indirekt
PyPIannotated-types0.7.0indirekt
PyPIanyio4.14.2indirekt
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PyPIauthlib1.7.2indirekt
PyPIbabel2.18.0indirekt
PyPIbackports-zstd1.6.0indirekt
PyPIbackrefs7.0indirekt
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PyPIcachetools7.1.4indirekt
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PyPIcertifi2026.6.17indirekt
PyPIcffi2.1.0indirekt
PyPIcharset-normalizer3.4.9indirekt
PyPIclick8.4.2indirekt
PyPIcloudpickle3.1.2indirekt
PyPIcolorama0.4.6indirekt
PyPIcomm0.2.3indirekt
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PyPIcryptography49.0.0indirekt
PyPIdebugpy1.8.21indirekt
PyPIdecorator5.3.1indirekt
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PyPIdocstring-parser0.18.0indirekt
PyPIemail-validator2.3.0indirekt
PyPIexceptiongroup1.3.1indirekt
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PyPIfastjsonschema2.21.2indirekt
PyPIfastmcp3.4.4indirekt
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PyPIfrozenlist1.8.0indirekt
PyPIfsspec2026.6.0indirekt
PyPIghp-import2.1.0indirekt
PyPIgriffelib2.1.0indirekt
PyPIh110.16.0indirekt
PyPIhttpcore1.0.9indirekt
PyPIhttpx0.28.1indirekt
PyPIhttpx-sse0.4.3indirekt
PyPIidna3.18indirekt
PyPIiniconfig2.3.0indirekt
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PyPIipywidgets8.1.8indirekt
PyPIjaraco-classes3.4.0indirekt
PyPIjaraco-context6.1.2indirekt
PyPIjaraco-functools4.5.0indirekt
PyPIjedi0.20.0indirekt
PyPIjeepney0.9.0indirekt
PyPIjinja23.1.6indirekt
PyPIjoserfc1.7.3indirekt
PyPIjsonref1.1.0indirekt
PyPIjsonschema4.26.0indirekt
PyPIjsonschema-path0.5.0indirekt
PyPIjsonschema-specifications2025.9.1indirekt
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PyPIjupyterlab-pygments0.3.0indirekt
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PyPIkeyring25.7.0indirekt
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PyPIwebsockets16.1indirekt
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PyPIzict3.0.0indirekt
JSON-Rohbericht maschinenlesbar
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                "key": "commit_distribution",
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                "key": "openssf_scorecard_contributors",
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            ]
          },
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            "key": "responsiveness",
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              "merged_prs": 78,
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                "key": "pr_acceptance",
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                "key": "openssf_scorecard_code_review",
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          {
            "key": "stewardship",
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              "followers": 225,
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              "is_verified": null,
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            "components": [
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                "key": "ownership_backing",
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                    "code": "owner_organization",
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                "max_points": 30
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              {
                "key": "verified_domain",
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              },
              {
                "key": "owner_reach",
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              },
              {
                "key": "track_record",
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                    "code": "public_repos",
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                    "code": "account_age_years",
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                "max_points": 25
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            ]
          },
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            "key": "package_maintenance",
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              "ecosystems": "pypi",
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                "key": "published_resolvable",
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                "max_points": 20
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              {
                "key": "not_deprecated",
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                "max_points": 20
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        ],
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                "key": "ci_workflows",
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                    "code": "ci_workflows",
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                "max_points": 24
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              {
                "key": "tests_present",
                "name": "Tests present",
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              },
              {
                "key": "linter_config",
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                "key": "pre_commit_hooks",
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              {
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                "key": "openssf_scorecard_ci_tests",
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        ],
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                "code": "weights_renormalized",
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            "value": 48,
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              {
                "key": "branch_protection",
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                "key": "cii_best_practices",
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              {
                "key": "code_review",
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              {
                "key": "contributors",
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              },
              {
                "key": "dangerous_workflow",
                "name": "Dangerous-Workflow",
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                "points": 10,
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                "details": [],
                "max_points": 10
              },
              {
                "key": "dependency_update_tool",
                "name": "Dependency-Update-Tool",
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              },
              {
                "key": "fuzzing",
                "name": "Fuzzing",
                "detail": "project is not fuzzed",
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              },
              {
                "key": "license",
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                "detail": "license file detected",
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                "max_points": 2.5
              },
              {
                "key": "maintained",
                "name": "Maintained",
                "detail": "30 commit(s) and 14 issue activity found in the last 90 days -- score normalized to 10",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
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              {
                "key": "packaging",
                "name": "Packaging",
                "detail": "packaging workflow detected",
                "points": 5,
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                "details": [],
                "max_points": 5
              },
              {
                "key": "pinned_dependencies",
                "name": "Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 0",
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                "status": "missed",
                "details": [],
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              },
              {
                "key": "sast",
                "name": "SAST",
                "detail": "SAST tool is not run on all commits -- score normalized to 0",
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                "status": "missed",
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              },
              {
                "key": "security_policy",
                "name": "Security-Policy",
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                "status": "missed",
                "details": [],
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              },
              {
                "key": "signed_releases",
                "name": "Signed-Releases",
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                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "token_permissions",
                "name": "Token-Permissions",
                "detail": "detected GitHub workflow tokens with excessive permissions",
                "points": 0,
                "status": "missed",
                "details": [],
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              },
              {
                "key": "vulnerabilities",
                "name": "Vulnerabilities",
                "detail": "0 existing vulnerabilities detected",
                "points": 7.5,
                "status": "met",
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                "max_points": 7.5
              }
            ]
          },
          {
            "key": "high_risk_jurisdiction_exposure",
            "band": "excellent",
            "name": "High-Risk Jurisdiction Exposure",
            "note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
            "notes": [
              {
                "code": "jurisdiction_evidence_limits",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "meaning": "self-published location evidence; not nationality or citizenship",
              "red_flag": false,
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              "policy_countries": [
                "Russia",
                "Iran",
                "North Korea"
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              "review_only_matches": 0,
              "assessed_self_published_locations": 2
            },
            "components": [
              {
                "key": "policy_exposure_multiplier",
                "name": "Policy exposure multiplier",
                "detail": "no confirmed policy-scope location match",
                "points": 100,
                "status": "met",
                "details": [
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