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#biophysics

Todos los repositorios del registro público que llevan esta etiqueta, procedente de sus topics de GitHub o de las palabras clave que publican sus registros de paquetes. La salud se mide con la misma metodología versionada que el resto del registro.

12 registros
Con la etiqueta «biophysics»Ordenado por índice de salud
PyPI
81Buenoíndice de salud
MDAnalysis/mdanalysis
MDAnalysis is a Python library to analyze molecular dynamics simulations.
Python★ 1610↓ 219.6K/mes21 jul 2026
Licencia propia21 jul 2026 · métricas 1.13.0
PyPI
67Moderadoíndice de salud
elkins/synth-pdb
Generate realistic PDB files with mixed secondary structures for testing, education and bioinformatics tool development. Jupyter Notebook tutorials are available to visualize the concepts..
Python★ 1↓ 3758/mes15 jul 2026
MIT15 jul 2026 · métricas 1.13.0
PyPI
63Moderadoíndice de salud
elkins-lab/synth-pdb
Generate realistic PDB files with mixed secondary structures for testing, education and bioinformatics tool development. Jupyter Notebook tutorials are available to visualize the concepts..
Python★ 117 jul 2026
MIT17 jul 2026 · métricas 1.13.0
PyPI
61Moderadoíndice de salud
elkins-lab/synth-saxs
A lightweight Python library for simulating Small-Angle X-ray Scattering (SAXS) profiles from protein coordinates, with Jupyter Notebook examples.
Python★ 1↓ 3502/mes17 jul 2026
MIT17 jul 2026 · métricas 1.13.0
PyPI
60Moderadoíndice de salud
Electrostatics/mmcif_pdbx
Yet another version of PDBx/mmCIF Python implementation
Python★ 915 jul 2026
CC0-1.015 jul 2026 · métricas 1.13.0
PyPI
60Moderadoíndice de salud
elkins-lab/diff-biophys
Differentiable biophysical modeling in JAX (SAXS, NMR, CD), with Jupyter Notebook examples.
Python★ 017 jul 2026
MIT17 jul 2026 · métricas 1.13.0
PyPI
59Moderadoíndice de salud
elkins-lab/synth-nmr
NMR spectroscopy calculations for protein structures. Jupyter Notebook tutorials are available to visualize the concepts.
Python★ 217 jul 2026
MIT17 jul 2026 · métricas 1.13.0
PyPI
56Moderadoíndice de salud
elkins-lab/diff-ensemble
Differentiable VAE framework for predicting protein structural ensembles (IDPs) consistent with SAXS and NMR data. Built on JAX/Flax.
Python★ 1↓ 158/mes17 jul 2026
MIT17 jul 2026 · métricas 1.13.0
PyPI
56Moderadoíndice de salud
elkins-lab/resonance-flow
JAX-native differentiable protein folding framework integrating experimental NMR constraints (RDCs) and biophysical "self-correction." Several Jupyter Notebooks visualize the concepts.
Python★ 117 jul 2026
MIT17 jul 2026 · métricas 1.13.0
PyPI
53Moderadoíndice de salud
electrostatics/apbs
Software for biomolecular electrostatics and solvation calculations
C · Python · MATLAB★ 13417 jul 2026
Licencia propia17 jul 2026 · métricas 1.13.0
PyPI
48En riesgoíndice de salud
elkins-lab/synth-dynamics
Fast Langevin dynamics engine using the Anisotropic Network Model (ANM) for rapid protein conformational ensemble generation.
Python · Shell★ 117 jul 2026
MIT17 jul 2026 · métricas 1.13.0
PyPI
35En riesgoíndice de salud
electrostatics/go2pdb
Extract PDB entries annotated with specific GO codes
Python · Jupyter Notebook★ 2↓ 998/mes15 jul 2026
Licencia propia15 jul 2026 · métricas 1.13.0