Öffentliches Register
Software-GesundheitsberichtSchema 0.11.0 · Metriken 1.13.0 · 2026-07-15 13:03 UTC

bijux / bijux-proteomics

PythonApache-2.0★ 2 Sterne⑂ 0 Forksseit Jan. 2026Auf GitHub ansehen ↗

bijux/bijux-proteomics erreicht einen Gesundheitsindex von 57 von 100 und liegt damit im Bereich Mittel. Am stärksten schneidet es bei Engineering Quality (82/100) ab, am schwächsten bei Sustainability & Governance (26/100). Zuletzt vor 4 Tagen aktualisiert. Ein einzelner Mitwirkender trägt den Großteil der jüngsten Arbeit.

57
gesamt / 100
Mittel

Software-Gesundheitsindex

Metriken werden auf einer Skala von 1–100 in gewichtete Kategorien gruppiert. Der Gesamtwert beginnt als ihr Mittel; sobald öffentliche Evidenz die Richtlinie für Hochrisikojurisdiktionen auslöst, wird die Bewertung angepasst und erhält die Obergrenze 49 (Gefährdet). AI Readiness liegt außerhalb.

57
Exzellent85-100Vorbildlich; erfüllt im Wesentlichen alle geprüften Kriterien
Gut70-84Gesund; geringfügige Lücken
Mittel50-69Akzeptabel mit deutlichen Lücken; Überprüfung empfohlen
Gefährdet30-49Erhebliche Schwächen; eine Übernahme erfordert Vorsicht
Kritisch1-29Schwerwiegende Probleme (aufgegeben, nur ein Maintainer, keine Hygiene)
VitalitätCommunity &VerbreitungNachhaltigkeit &GovernanceEngineering-QualitätSicherheitAI Readiness

Bewertungsprofil

Jede Achse ist eine Kategorie. Die Form zählt mehr als der Durchschnitt — ein gesundes Projekt füllt die gesamte Fläche, während ein Profil aus Spitzen und Kratern bedeutet, dass Stärke in einer Dimension Risiken in einer anderen verdeckt.

Eigentümerschaft

Bijan MousaviPersönliches Konto
5 Follower12 öffentliche Reposseit Juli 2025

Dieses Repository gehört einem persönlichen Konto. Ein Projekt mit nur einem Eigentümer trägt ein höheres Kontinuitätsrisiko als ein organisationsgetragenes.

Metriken nach Kategorie

Vitalität

Lebt das Projekt — wird Code geschrieben und werden Releases ausgeliefert?

80Gut · 22 % des Gesamtindex
Wie die Bewertung erfolgt
36/36Push-Aktualität — letzter Push vor 4 Tagen
9/36Commit-Rhythmus — 13/52 Wochen mit Commits
18/18Commit-Volumen — 6.881 Commits im letzten Jahr
10/10OpenSSF Scorecard: Maintained — 30 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10
Verwendete Eingangsdaten
commits_last_year6.881
human_commit_share
days_since_last_push4
active_weeks_last_year13
Wie die Bewertung erfolgt
27/27Liefert Releases aus — 5 Releases veröffentlicht
36/36Release-Aktualität — letztes Release vor 14 Tagen
27/27Release-Rhythmus — ein Release etwa alle 20,4 Tage
0/10OpenSSF Scorecard: Signed-Releases — Project has not signed or included provenance with any releases.
Verwendete Eingangsdaten
releases_count5
latest_release_tagv0.3.8
releases_from_tagsnein
days_since_latest_release14
mean_days_between_releases20,4

Community & Verbreitung

Hat das Projekt Nutzer, Downloads, Aufmerksamkeit und ein einladendes Umfeld für Beitragende?

40Gefährdet · 18 % des Gesamtindex
Wie die Bewertung erfolgt
0/60Stars — 2 Stars
0/25Forks — 0 Forks
0/15Watcher — 0 Watcher
Verwendete Eingangsdaten
forks0
stars2
watchers0
growth_stateunverified
growth_factor_pct100
growth_unverified_reasonno_history
Wie die Bewertung erfolgt
22.5/22.5README
22.5/22.5Lizenz — anerkannte Lizenz (Apache-2.0)
18/18CONTRIBUTING-Leitfaden
13.5/13.5Verhaltenskodex
0/7.2Issue-Vorlage
0/6.3PR-Vorlage
Verwendete Eingangsdaten
has_readmeja
has_licenseja
has_contributingja
has_issue_templatenein
has_code_of_conductja
has_pull_request_templatenein

Nachhaltigkeit & Governance

Überdauert das Projekt die Menschen, die es tragen — Bus-Faktor, Reaktionsfähigkeit, Trägerschaft und Paketpflege?

26Kritisch · 24 % des Gesamtindex
Wie die Bewertung erfolgt
9/54Bus-Faktor — 1 Beitragende decken die Hälfte aller Commits ab
0.1/22.5Commit-Verteilung — wichtigste beitragende Person verfasste 100 % der Commits
4.1/13.5Breite der Beitragenden — 3 Beitragende
0/10OpenSSF Scorecard: Contributors — project has 0 contributing companies or organizations -- score normalized to 0
Verwendete Eingangsdaten
bus_factor1
contributors_sampled3
top_contributor_share0,995
Wie die Bewertung erfolgt
0/46.8Issue-Lösungsquote — keine Issues oder keine Daten
19.5/38.3PR-Annahme — 95/186 entschiedene PRs gemergt
0/15OpenSSF Scorecard: Code-Review — Found 0/2 approved changesets -- score normalized to 0
Verwendete Eingangsdaten
merged_prs95
open_issues0
closed_issues0
issue_closed_ratio
closed_unmerged_prs91
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): Issue-Lösungsquote. Die verbleibenden Gewichte wurden renormalisiert.
Wie die Bewertung erfolgt
10/30Organisatorische Trägerschaft — persönliches (Nutzer-)Konto
0/20Verifizierte Domain — für Nutzerkonten nicht anwendbar
5.6/25Reichweite des Inhabers — 5 Follower von bijux
10.1/25Kontohistorie — 12 öffentliche Repos, Kontoalter ca. 0 Jahre
Verwendete Eingangsdaten
followers5
owner_typeUser
is_verified
owner_loginbijux
public_repos12
account_age_days357
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): Verifizierte Domain. Die verbleibenden Gewichte wurden renormalisiert.

Engineering-Qualität

Sind grundlegende Engineering- und Dokumentationspraktiken vorhanden?

82Gut · 20 % des Gesamtindex
Wie die Bewertung erfolgt
24/24CI-Workflows — 11 Workflow(s)
24/24Tests vorhanden
16/16Linter-Konfiguration — ruff.toml, tox.ini
0/9.6Pre-Commit-Hooks
0/6.4.editorconfig
20/20OpenSSF Scorecard: CI-Tests — 2 out of 2 merged PRs checked by a CI test -- score normalized to 10
Verwendete Eingangsdaten
has_cija
has_testsja
has_editorconfignein
has_linter_configja
has_precommit_confignein
Wie die Bewertung erfolgt
30/30README
25/25Dokumentationsverzeichnis
15/15Dokumentations-/Homepage-Site — http://bijux.io/bijux-proteomics/
0/10Repository-Beschreibung
0/10Topics
10/10Wiki
Verwendete Eingangsdaten
topics
has_wikija
homepagehttp://bijux.io/bijux-proteomics/
has_readmeja
has_docs_dirja
has_descriptionnein

Sicherheit

Sind die sichtbaren Sicherheits- und Lieferkettenpraktiken belastbar, ohne ungeklärte Exposition gegenüber Hochrisikojurisdiktionen?

59Mittel · 16 % des Gesamtindex
Wie die Bewertung erfolgt
7.5/7.5Binary-Artifacts — no binaries found in the repo
3/7.5Branch-Protection — branch protection is not maximal on development and all release branches
2.5/2.5CI-Tests — 2 out of 2 merged PRs checked by a CI test -- score normalized to 10
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
0/7.5Code-Review — Found 0/2 approved changesets -- score normalized to 0
0/2.5Contributors — project has 0 contributing companies or organizations -- score normalized to 0
10/10Dangerous-Workflow — no dangerous workflow patterns detected
7.5/7.5Dependency-Update-Tool — update tool detected
0/5Fuzzing — project is not fuzzed
2.5/2.5Lizenz — license file detected
7.5/7.5Maintained — 30 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10
5/5Packaging — packaging workflow detected
5/5Pinned-Dependencies — all dependencies are pinned
0/5SAST — SAST tool is not run on all commits -- score normalized to 0
5/5Security-Policy — security policy file detected
0/7.5Signed-Releases — Project has not signed or included provenance with any releases.
0/7.5Token-Permissions — detected GitHub workflow tokens with excessive permissions
6/7.5Vulnerabilities — 2 existing vulnerabilities detected
Verwendete Eingangsdaten
sourceopenssf_scorecard
checks_evaluated18
scorecard_versionv5.5.0
checks_inconclusive0
scorecard_aggregate5,9

AI Readiness

Wie gut ist das Repository dafür ausgestattet, mit KI-Coding-Agenten entwickelt und gepflegt zu werden? Ein unabhängiges, experimentelles Badge — Gewicht 0,0, es wird eigenständig ausgewiesen und verändert den Gesamt-Gesundheitswert nicht.

57Mittel · 0 % des Gesamtindex
Wie die Bewertung erfolgt
0/45Agentenanweisungen — keine CLAUDE.md / AGENTS.md / Editor-Regeln
0/15Maschinenlesbare Doku (llms.txt)
0/40Lesbare Commit-Historie — keine Daten
Verwendete Eingangsdaten
has_llms_txtnein
legible_history_share
agent_instruction_files
agent_instruction_max_bytes
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): Lesbare Commit-Historie. Die verbleibenden Gewichte wurden renormalisiert.
Wie die Bewertung erfolgt
18/18Bootstrap mit einem Befehl — Makefile
22/22Automatisierte Tests
11/11Lint-/Format-Konfiguration — ruff.toml, tox.ini
11/11Statische Typprüfung — configs/mypy.ini, packages/agentic-proteins/src/agentic_proteins/py.typed, packages/bijux-proteomics-core/src/bijux_proteomics/py.typed, packages/bijux-proteomics-dev/src/bijux_proteomics_dev/py.typed, packages/bijux-proteomics-foundation/src/bijux_proteomics_foundation/py.typed, packages/bijux-proteomics-intelligence/src/bijux_proteomics_intelligence/py.typed, packages/bijux-proteomics-knowledge/src/bijux_proteomics_knowledge/py.typed, packages/bijux-proteomics-lab/src/bijux_proteomics_lab/py.typed, packages/bijux-proteomics-runtime/src/bijux_proteomics_runtime/py.typed, packages/bijux-proteomics/src/bijux_proteomics_alias/py.typed, packages/proteomics-core/src/proteomics_core/py.typed, packages/proteomics-foundation/src/proteomics_foundation/py.typed, packages/proteomics-intelligence/src/proteomics_intelligence/py.typed, packages/proteomics-knowledge/src/proteomics_knowledge/py.typed, packages/proteomics-lab/src/proteomics_lab/py.typed, packages/proteomics-runtime/src/proteomics_runtime/py.typed, packages/proteomics/src/proteomics/py.typed
10/10Reproduzierbare Umgebung — lockfile
0/10Belegte Agentenpraxis — keine Daten
5/8Automatisierte Wartung — Abhängigkeits-Automatisierung konfiguriert, in den erfassten Commits nicht beobachtet
10/10OpenSSF Scorecard: Pinned-Dependencies — all dependencies are pinned
Verwendete Eingangsdaten
has_nixnein
has_testsja
lockfilespackage-lock.json, uv.lock
has_dockerfilenein
typed_languagenein
bootstrap_filesMakefile
has_devcontainernein
has_linter_configja
typecheck_configsconfigs/mypy.ini, packages/agentic-proteins/src/agentic_proteins/py.typed, packages/bijux-proteomics-core/src/bijux_proteomics/py.typed, packages/bijux-proteomics-dev/src/bijux_proteomics_dev/py.typed, packages/bijux-proteomics-foundation/src/bijux_proteomics_foundation/py.typed, packages/bijux-proteomics-intelligence/src/bijux_proteomics_intelligence/py.typed, packages/bijux-proteomics-knowledge/src/bijux_proteomics_knowledge/py.typed, packages/bijux-proteomics-lab/src/bijux_proteomics_lab/py.typed, packages/bijux-proteomics-runtime/src/bijux_proteomics_runtime/py.typed, packages/bijux-proteomics/src/bijux_proteomics_alias/py.typed, packages/proteomics-core/src/proteomics_core/py.typed, packages/proteomics-foundation/src/proteomics_foundation/py.typed, packages/proteomics-intelligence/src/proteomics_intelligence/py.typed, packages/proteomics-knowledge/src/proteomics_knowledge/py.typed, packages/proteomics-lab/src/proteomics_lab/py.typed, packages/proteomics-runtime/src/proteomics_runtime/py.typed, packages/proteomics/src/proteomics/py.typed
agent_commit_share
toolchain_manifests
dependency_bot_commit_share0
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): Belegte Agentenpraxis. Die verbleibenden Gewichte wurden renormalisiert.
Wie die Bewertung erfolgt
27/45Typprüfbarer Code — Python mit Typprüfungs-Konfiguration (configs/mypy.ini, packages/agentic-proteins/src/agentic_proteins/py.typed, packages/bijux-proteomics-core/src/bijux_proteomics/py.typed, packages/bijux-proteomics-dev/src/bijux_proteomics_dev/py.typed, packages/bijux-proteomics-foundation/src/bijux_proteomics_foundation/py.typed, packages/bijux-proteomics-intelligence/src/bijux_proteomics_intelligence/py.typed, packages/bijux-proteomics-knowledge/src/bijux_proteomics_knowledge/py.typed, packages/bijux-proteomics-lab/src/bijux_proteomics_lab/py.typed, packages/bijux-proteomics-runtime/src/bijux_proteomics_runtime/py.typed, packages/bijux-proteomics/src/bijux_proteomics_alias/py.typed, packages/proteomics-core/src/proteomics_core/py.typed, packages/proteomics-foundation/src/proteomics_foundation/py.typed, packages/proteomics-intelligence/src/proteomics_intelligence/py.typed, packages/proteomics-knowledge/src/proteomics_knowledge/py.typed, packages/proteomics-lab/src/proteomics_lab/py.typed, packages/proteomics-runtime/src/proteomics_runtime/py.typed, packages/proteomics/src/proteomics/py.typed)
54.8/55Handhabbare Dateigrößen — 12/3.667 Quelldateien über 60 KB
Verwendete Eingangsdaten
primary_languagePython
largest_source_bytes576.731
source_files_sampled3.667
oversized_source_files12
Wie die Bewertung erfolgt
0/40API-Schema (OpenAPI/GraphQL/proto)
0/20MCP-Server
40/40Lauffähige Beispiele — examples
Verwendete Eingangsdaten
example_dirsexamples
has_mcp_signalnein
api_schema_files

Eckdaten

2GitHub-Sterne
3Mitwirkende
6.881Commits, letzte 12 Monate
4Tage seit letztem Push
5Releases
1Bus-Faktor
0offene Issues
npm, PyPIPaket-Ökosysteme

Warnungen zur Datenerhebung

  • Could not fetch pypi package 'bijux-proteomics-repository' from its registry

Weitere Details

OpenSSF Scorecard 5.9 / 10
5.9Gesamtwert

Unabhängige, werkzeugneutrale Sicherheitsbewertung durch das quelloffene OpenSSF Scorecard. Jede Prüfung honoriert eine Sicherheits-Praxis, nicht das Werkzeug eines bestimmten Anbieters. Prüfungen, die Scorecard nicht ermitteln konnte, sind mit k. A. markiert und vom Sicherheitswert ausgeschlossen (nie als null gezählt).Scorecard v5.5.0 · 2026-07-15 13:03 UTC

10Binary-Artifactsno binaries found in the repo
4Branch-Protectionbranch protection is not maximal on development and all release branches
10CI-Tests2 out of 2 merged PRs checked by a CI test -- score normalized to 10
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
0Code-ReviewFound 0/2 approved changesets -- score normalized to 0
0Contributorsproject has 0 contributing companies or organizations -- score normalized to 0
10Dangerous-Workflowno dangerous workflow patterns detected
10Dependency-Update-Toolupdate tool detected
0Fuzzingproject is not fuzzed
10Licenselicense file detected
10Maintained30 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10
10Packagingpackaging workflow detected
10Pinned-Dependenciesall dependencies are pinned
0SASTSAST tool is not run on all commits -- score normalized to 0
10Security-Policysecurity policy file detected
0Signed-ReleasesProject has not signed or included provenance with any releases.
0Token-Permissionsdetected GitHub workflow tokens with excessive permissions
8Vulnerabilities2 existing vulnerabilities detected
Alle Abhängigkeiten 447

Vollständig aufgelöster Abhängigkeitssatz aus dem GitHub-Abhängigkeitsgraphen: 0 direkte und 447 indirekte (transitive) Pakete. Die transitive Hülle ist vollständig, wenn das Repository eine Lockfile eincheckt.

RegistryPaketVersionBeziehung
npm@borewit/text-codec0.2.2indirekt
npm@inquirer/core6.0.0indirekt
npm@inquirer/select1.3.3indirekt
npm@inquirer/type1.5.5indirekt
npm@lukeed/csprng1.1.0indirekt
npm@nestjs/axios4.0.1indirekt
npm@nestjs/common11.1.27indirekt
npm@nestjs/core11.1.27indirekt
npm@nuxtjs/opencollective0.3.2indirekt
npm@openapitools/openapi-generator-cli2.39.1indirekt
npm@redocly/cli2.37.0indirekt
npm@tokenizer/inflate0.4.1indirekt
npm@tokenizer/token0.3.0indirekt
npm@types/mute-stream0.0.4indirekt
npm@types/node20.19.39indirekt
npm@types/node25.5.2indirekt
npm@types/wrap-ansi3.0.0indirekt
npmagent-base6.0.2indirekt
npmagent-base9.0.0indirekt
npmansi-escapes4.3.2indirekt
npmansi-regex5.0.1indirekt
npmansi-regex6.2.2indirekt
npmansi-styles4.3.0indirekt
npmansi-styles6.2.3indirekt
npmast-types0.13.4indirekt
npmasynckit0.4.0indirekt
npmaxios1.16.1indirekt
npmbalanced-match4.0.4indirekt
npmbasic-ftp5.3.1indirekt
npmbrace-expansion5.0.6indirekt
npmcall-bind-apply-helpers1.0.2indirekt
npmchalk4.1.2indirekt
npmchalk5.6.2indirekt
npmcli-spinners2.9.2indirekt
npmcli-width4.1.0indirekt
npmcliui9.0.1indirekt
npmclone1.0.4indirekt
npmcolor-convert2.0.1indirekt
npmcolor-name1.1.4indirekt
npmcombined-stream1.0.8indirekt
npmcommander8.3.0indirekt
npmcompare-versions6.1.1indirekt
npmconcurrently10.0.3indirekt
npmconsola2.15.3indirekt
npmconsole.table0.10.0indirekt
npmdata-uri-to-buffer8.0.0indirekt
npmdebug4.4.3indirekt
npmdefaults1.0.4indirekt
npmdegenerator7.0.1indirekt
npmdelayed-stream1.0.0indirekt
npmdunder-proto1.0.1indirekt
npmeasy-table1.1.0indirekt
npmemoji-regex10.6.0indirekt
npmemoji-regex8.0.0indirekt
npmes-define-property1.0.1indirekt
npmes-errors1.3.0indirekt
npmes-object-atoms1.1.1indirekt
npmes-set-tostringtag2.1.0indirekt
npmescalade3.2.0indirekt
npmescape-string-regexp1.0.5indirekt
npmescodegen2.1.0indirekt
npmesprima4.0.1indirekt
npmestraverse5.3.0indirekt
npmesutils2.0.3indirekt
npmfast-safe-stringify2.1.1indirekt
npmfigures3.2.0indirekt
npmfile-type21.3.4indirekt
npmfollow-redirects1.16.0indirekt
npmform-data4.0.6indirekt
npmfs-extra11.3.6indirekt
npmfunction-bind1.1.2indirekt
npmget-caller-file2.0.5indirekt
npmget-east-asian-width1.6.0indirekt
npmget-intrinsic1.3.0indirekt
npmget-proto1.0.1indirekt
npmget-uri8.0.1indirekt
npmglob13.0.6indirekt
npmgopd1.2.0indirekt
npmgraceful-fs4.2.11indirekt
npmhas-flag4.0.0indirekt
npmhas-symbols1.1.0indirekt
npmhas-tostringtag1.0.2indirekt
npmhasown2.0.4indirekt
npmhttp-proxy-agent9.1.0indirekt
npmhttps-proxy-agent5.0.1indirekt
npmhttps-proxy-agent9.1.0indirekt
npmieee7541.2.1indirekt
npmip-address10.2.0indirekt
npmis-fullwidth-code-point3.0.0indirekt
npmiterare1.2.1indirekt
npmjsonfile6.2.1indirekt
npmload-esm1.0.3indirekt
npmlru-cache11.2.7indirekt
npmlru-cache7.18.3indirekt
npmmath-intrinsics1.1.0indirekt
npmmime-db1.52.0indirekt
npmmime-types2.1.35indirekt
npmminimatch10.2.5indirekt
npmminipass7.1.3indirekt
npmms2.1.3indirekt
npmmute-stream1.0.0indirekt
npmnetmask2.1.1indirekt
npmnode-fetch2.7.0indirekt
npmpac-proxy-agent9.1.0indirekt
npmpac-resolver9.0.1indirekt
npmpath-scurry2.0.2indirekt
npmpath-to-regexp8.4.2indirekt
npmproxy-agent8.0.2indirekt
npmproxy-agent-negotiate1.1.0indirekt
npmproxy-from-env2.1.0indirekt
npmquickjs-wasi2.2.0indirekt
npmreflect-metadata0.2.2indirekt
npmrun-async3.0.0indirekt
npmrxjs7.8.2indirekt
npmshell-quote1.8.4indirekt
npmsignal-exit4.1.0indirekt
npmsmart-buffer4.2.0indirekt
npmsocks2.8.9indirekt
npmsocks-proxy-agent10.1.0indirekt
npmsource-map0.6.1indirekt
npmstring-width4.2.3indirekt
npmstring-width7.2.0indirekt
npmstrip-ansi6.0.1indirekt
npmstrip-ansi7.2.0indirekt
npmstrtok310.3.5indirekt
npmsupports-color10.2.2indirekt
npmsupports-color7.2.0indirekt
npmtoken-types6.1.2indirekt
npmtr460.0.3indirekt
npmtree-kill1.2.2indirekt
npmtslib2.8.1indirekt
npmtype-fest0.21.3indirekt
npmuid2.0.2indirekt
npmuint8array-extras1.5.0indirekt
npmundici-types6.21.0indirekt
npmundici-types7.18.2indirekt
npmuniversalify2.0.1indirekt
npmwcwidth1.0.1indirekt
npmwebidl-conversions3.0.1indirekt
npmwhatwg-url5.0.0indirekt
npmwrap-ansi6.2.0indirekt
npmwrap-ansi9.0.2indirekt
npmy18n5.0.8indirekt
npmyargs18.0.0indirekt
npmyargs-parser22.0.0indirekt
PyPIagentic-proteinsindirekt
PyPIaiohappyeyeballs2.6.1indirekt
PyPIaiohttp3.14.1indirekt
PyPIaiosignal1.4.0indirekt
PyPIannotated-doc0.0.4indirekt
PyPIannotated-types0.7.0indirekt
PyPIanyio4.13.0indirekt
PyPIarq0.27.0indirekt
PyPIast-serialize0.3.0indirekt
PyPIasync-timeout5.0.1indirekt
PyPIattrs26.1.0indirekt
PyPIbabel2.18.0indirekt
PyPIbackports-tarfile1.2.0indirekt
PyPIbackports-zstd1.3.0indirekt
PyPIbackrefs6.2indirekt
PyPIbanditindirekt
PyPIbandit1.9.4indirekt
PyPIbijux-proteomics-coreindirekt
PyPIbijux-proteomics-foundationindirekt
PyPIbijux-proteomics-intelligenceindirekt
PyPIbijux-proteomics-knowledgeindirekt
PyPIbijux-proteomics-labindirekt
PyPIbijux-proteomics-runtimeindirekt
PyPIbiopythonindirekt
PyPIbiopython1.87indirekt
PyPIboolean-py5.0indirekt
PyPIbuildindirekt
PyPIbuild1.4.2indirekt
PyPIcachecontrol0.14.4indirekt
PyPIcertifi2026.2.25indirekt
PyPIcffi2.0.0indirekt
PyPIchardet7.4.1indirekt
PyPIcharset-normalizer3.4.7indirekt
PyPIclickindirekt
PyPIclick8.3.2indirekt
PyPIcodespellindirekt
PyPIcodespell2.4.2indirekt
PyPIcolorama0.4.6indirekt
PyPIcoverage7.13.5indirekt
PyPIcryptography49.0.0indirekt
PyPIcyclonedx-python-lib11.7.0indirekt
PyPIdataclasses-json0.6.7indirekt
PyPIdefusedxmlindirekt
PyPIdefusedxml0.7.1indirekt
PyPIdeprecated1.3.1indirekt
PyPIdeptryindirekt
PyPIdeptry0.25.1indirekt
PyPIdistlib0.4.0indirekt
PyPIdistro1.9.0indirekt
PyPIdocutils0.22.4indirekt
PyPIeinopsindirekt
PyPIeinops0.8.2indirekt
PyPIfastapiindirekt
PyPIfastapi0.135.3indirekt
PyPIfilelock3.25.2indirekt
PyPIfrozenlist1.8.0indirekt
PyPIfsspec2026.3.0indirekt
PyPIgemmi0.7.5indirekt
PyPIghp-import2.1.0indirekt
PyPIgitdb4.0.12indirekt
PyPIgitpythonindirekt
PyPIgitpython3.1.50indirekt
PyPIgreenlet3.4.0indirekt
PyPIh110.16.0indirekt
PyPIhatchindirekt
PyPIhatch1.16.5indirekt
PyPIhatch-fancy-pypi-readmeindirekt
PyPIhatch-vcsindirekt
PyPIhatchlingindirekt
PyPIhatchling1.30.1indirekt
PyPIhf-xet1.4.3indirekt
PyPIhiredis3.3.1indirekt
PyPIhttpcore1.0.9indirekt
PyPIhttpxindirekt
PyPIhttpx0.28.1indirekt
PyPIhttpx-sse0.4.3indirekt
PyPIhuggingface-hubindirekt
PyPIhuggingface-hub1.11.0indirekt
PyPIhyperlink21.0.0indirekt
PyPIhypothesisindirekt
PyPIhypothesis6.151.12indirekt
PyPIhypothesis-jsonschema0.23.1indirekt
PyPIid1.6.1indirekt
PyPIidnaindirekt
PyPIidna3.18indirekt
PyPIimmutabledict4.3.1indirekt
PyPIimportlab0.8.1indirekt
PyPIimportlib-metadata9.0.0indirekt
PyPIiniconfig2.3.0indirekt
PyPIinterrogateindirekt
PyPIinterrogate1.7.0indirekt
PyPIjaraco-classes3.4.0indirekt
PyPIjaraco-context6.1.2indirekt
PyPIjaraco-functools4.4.0indirekt
PyPIjeepney0.9.0indirekt
PyPIjinja23.1.6indirekt
PyPIjsonpatch1.33indirekt
PyPIjsonpointer3.1.1indirekt
PyPIjsonschema4.24.1indirekt
PyPIjsonschema-path0.4.5indirekt
PyPIjsonschema-specifications2025.9.1indirekt
PyPIkeyring25.7.0indirekt
PyPIlangchain-classic1.0.7indirekt
PyPIlangchain-communityindirekt
PyPIlangchain-community0.4.1indirekt
PyPIlangchain-coreindirekt
PyPIlangchain-core1.4.0indirekt
PyPIlangchain-huggingfaceindirekt
PyPIlangchain-huggingface1.2.1indirekt
PyPIlangchain-protocol0.0.15indirekt
PyPIlangchain-text-splittersindirekt
PyPIlangchain-text-splitters1.1.2indirekt
PyPIlangsmithindirekt
PyPIlangsmith0.9.3indirekt
PyPIlazy-object-proxy1.12.0indirekt
PyPIlibcst1.8.6indirekt
PyPIlibrt0.11.0indirekt
PyPIlicense-expression30.4.4indirekt
PyPIlimits5.8.0indirekt
PyPIloguruindirekt
PyPIloguru0.7.3indirekt
PyPImando0.7.1indirekt
PyPImarkdown3.10.2indirekt
PyPImarkdown-it-py4.0.0indirekt
PyPImarkupsafe3.0.3indirekt
PyPImarshmallow3.26.2indirekt
PyPImdurl0.1.2indirekt
PyPImergedeep1.3.4indirekt
PyPImkdocsindirekt
PyPImkdocs1.6.1indirekt
PyPImkdocs-autorefsindirekt
PyPImkdocs-autorefs1.4.4indirekt
PyPImkdocs-get-deps0.2.2indirekt
PyPImkdocs-git-revision-date-localized-pluginindirekt
PyPImkdocs-git-revision-date-localized-plugin1.5.1indirekt
PyPImkdocs-materialindirekt
PyPImkdocs-material9.7.6indirekt
PyPImkdocs-material-extensions1.3.1indirekt
PyPImkdocs-redirectsindirekt
PyPImkdocs-redirects1.2.3indirekt
PyPImore-itertools11.0.1indirekt
PyPImsgpackindirekt
PyPImsgpack1.2.1indirekt
PyPImsgspec0.20.0indirekt
PyPImultidict6.7.1indirekt
PyPImypyindirekt
PyPImypy2.1.0indirekt
PyPImypy-extensions1.1.0indirekt
PyPInetworkx3.6.1indirekt
PyPInh30.3.4indirekt
PyPIninja1.13.0indirekt
PyPInodeenv1.10.0indirekt
PyPInumpyindirekt
PyPInumpy1.26.4indirekt
PyPInumpy2.4.4indirekt
PyPIopenapi-schema-validator0.8.1indirekt
PyPIopenapi-spec-validator0.8.4indirekt
PyPIopenprotein-pythonindirekt
PyPIopenprotein-python0.12.1indirekt
PyPIorjson3.11.8indirekt
PyPIpackageurl-python0.17.6indirekt
PyPIpackagingindirekt
PyPIpackaging25.0indirekt
PyPIpaginate0.5.7indirekt
PyPIpandas2.3.3indirekt
PyPIpathable0.5.0indirekt
PyPIpathspec1.0.4indirekt
PyPIpexpect4.9.0indirekt
PyPIpip26.1indirekt
PyPIpip-api0.0.34indirekt
PyPIpip-auditindirekt
PyPIpip-audit2.10.0indirekt
PyPIpip-requirements-parser32.0.1indirekt
PyPIplatformdirs4.9.4indirekt
PyPIpluggy1.6.0indirekt
PyPIprance25.4.8.0indirekt
PyPIpropcache0.4.1indirekt
PyPIproperdocs1.6.7indirekt
PyPIptyprocess0.7.0indirekt
PyPIpy1.11.0indirekt
PyPIpy-cpuinfo9.0.0indirekt
PyPIpy-serializable2.1.0indirekt
PyPIpyarrowindirekt
PyPIpyarrow24.0.0indirekt
PyPIpycnite2024.7.31indirekt
PyPIpycparser3.0indirekt
PyPIpydanticindirekt
PyPIpydantic2.12.5indirekt
PyPIpydantic-core2.41.5indirekt
PyPIpydantic-settings2.14.2indirekt
PyPIpydocstyleindirekt
PyPIpydocstyle6.3.0indirekt
PyPIpydot4.0.1indirekt
PyPIpyfakefs6.1.6indirekt
PyPIpygments2.20.0indirekt
PyPIpyjwt2.13.0indirekt
PyPIpymdown-extensionsindirekt
PyPIpymdown-extensions10.21.3indirekt
PyPIpyparsing3.3.2indirekt
PyPIpyproject-hooks1.2.0indirekt
PyPIpyrightindirekt
PyPIpyright1.1.409indirekt
PyPIpytestindirekt
PyPIpytest9.1.1indirekt
PyPIpytest-asyncioindirekt
PyPIpytest-asyncio1.4.0indirekt
PyPIpytest-benchmarkindirekt
PyPIpytest-benchmark5.2.3indirekt
PyPIpytest-covindirekt
PyPIpytest-cov7.1.0indirekt
PyPIpytest-mock3.15.1indirekt
PyPIpytest-rerunfailures13.0indirekt
PyPIpytest-timeoutindirekt
PyPIpytest-timeout2.4.0indirekt
PyPIpython-dateutil2.9.0.post0indirekt
PyPIpython-discovery1.2.2indirekt
PyPIpython-dotenv1.2.2indirekt
PyPIpytype2024.10.11indirekt
PyPIpytz2026.1.post1indirekt
PyPIpywin32-ctypes0.2.3indirekt
PyPIpyyamlindirekt
PyPIpyyaml6.0.3indirekt
PyPIpyyaml-env-tag1.1indirekt
PyPIpyyaml-ft8.0.0indirekt
PyPIradonindirekt
PyPIradon6.0.1indirekt
PyPIreadme-renderer44.0indirekt
PyPIredis5.3.1indirekt
PyPIreferencing0.37.0indirekt
PyPIregex2026.4.4indirekt
PyPIrequestsindirekt
PyPIrequests2.33.1indirekt
PyPIrequests-toolbelt1.0.0indirekt
PyPIrequirements-parser0.13.0indirekt
PyPIrfc3339-validator0.1.4indirekt
PyPIrfc39862.0.0indirekt
PyPIrich14.3.3indirekt
PyPIrpds-py0.30.0indirekt
PyPIruamel-yaml0.19.1indirekt
PyPIruffindirekt
PyPIruff0.15.9indirekt
PyPIsafetensors0.7.0indirekt
PyPIsecretstorage3.5.0indirekt
PyPIshellingham1.5.4indirekt
PyPIsix1.17.0indirekt
PyPIslowapiindirekt
PyPIslowapi0.1.9indirekt
PyPIsmmap5.0.3indirekt
PyPIsniffio1.3.1indirekt
PyPIsnowballstemmer3.0.1indirekt
PyPIsortedcontainers2.4.0indirekt
PyPIsqlalchemy2.0.49indirekt
PyPIstarletteindirekt
PyPIstarlette1.3.1indirekt
PyPIstevedore5.7.0indirekt
PyPItabulate0.10.0indirekt
PyPItenacity9.1.4indirekt
PyPItokenizersindirekt
PyPItokenizers0.22.2indirekt
PyPItoml0.10.2indirekt
PyPItomli2.4.1indirekt
PyPItomli-w1.2.0indirekt
PyPItomlkit0.14.0indirekt
PyPItorchindirekt
PyPItqdm4.67.3indirekt
PyPItransformersindirekt
PyPItransformers5.5.4indirekt
PyPItrove-classifiers2026.1.14.14indirekt
PyPItwine6.2.0indirekt
PyPItyper0.24.1indirekt
PyPItypes-colorama0.4.15.20260408indirekt
PyPItypes-defusedxmlindirekt
PyPItypes-defusedxml0.7.0.20260408indirekt
PyPItypes-orjson3.6.2indirekt
PyPItypes-pexpect4.9.0.20260408indirekt
PyPItypes-psutil6.1.0.20241221indirekt
PyPItypes-pyyamlindirekt
PyPItypes-pyyaml6.0.12.20260408indirekt
PyPItypes-requestsindirekt
PyPItypes-requests2.33.0.20260408indirekt
PyPItyping-extensions4.15.0indirekt
PyPItyping-inspect0.9.0indirekt
PyPItyping-inspection0.4.2indirekt
PyPItzdata2026.1indirekt
PyPIurllib3indirekt
PyPIurllib32.7.0indirekt
PyPIuserpath1.9.2indirekt
PyPIuuid-utils0.14.1indirekt
PyPIuv0.11.24indirekt
PyPIuvicornindirekt
PyPIuvicorn0.44.0indirekt
PyPIvirtualenv21.2.0indirekt
PyPIvultureindirekt
PyPIvulture2.16indirekt
PyPIwatchdog6.0.0indirekt
PyPIwebsockets16.0indirekt
PyPIwin32-setctime1.2.0indirekt
PyPIwrapt2.1.2indirekt
PyPIxxhash3.6.0indirekt
PyPIyarl1.23.0indirekt
PyPIzipp3.23.0indirekt
PyPIzstandard0.23.0indirekt
JSON-Rohbericht maschinenlesbar
{
  "data": {
    "repo": {
      "topics": [],
      "is_fork": false,
      "size_kb": 24616,
      "has_wiki": true,
      "homepage": "http://bijux.io/bijux-proteomics/",
      "languages": {
        "CSS": 65378,
        "HTML": 53279,
        "Shell": 41801,
        "Python": 23197164,
        "Makefile": 282341,
        "JavaScript": 47483
      },
      "pushed_at": "2026-07-10T15:44:38Z",
      "created_at": "2026-01-14T18:16:22Z",
      "owner_type": "User",
      "updated_at": "2026-07-04T21:54:41Z",
      "description": null,
      "is_archived": false,
      "is_disabled": false,
      "license_spdx": "Apache-2.0",
      "default_branch": "main",
      "primary_language": "Python",
      "significant_languages": [
        "Python"
      ]
    },
    "owner": {
      "blog": "https://bijux.io",
      "name": "Bijan Mousavi",
      "type": "User",
      "login": "bijux",
      "company": null,
      "followers": 5,
      "avatar_url": "https://avatars.githubusercontent.com/u/222414480?v=4",
      "created_at": "2025-07-23T11:06:33Z",
      "is_verified": null,
      "public_repos": 12,
      "account_age_days": 357
    },
    "activity": {
      "releases_count": 5,
      "commits_last_year": 6881,
      "latest_release_at": "2026-07-01T10:14:07Z",
      "latest_release_tag": "v0.3.8",
      "releases_from_tags": false,
      "days_since_last_push": 4,
      "active_weeks_last_year": 13,
      "days_since_latest_release": 14,
      "mean_days_between_releases": 20.4
    },
    "community": {
      "has_readme": true,
      "has_license": true,
      "has_description": false,
      "has_contributing": true,
      "health_percentage": 71,
      "has_issue_template": false,
      "has_code_of_conduct": true,
      "has_pull_request_template": false
    },
    "ecosystem": {
      "packages": []
    },
    "popularity": {
      "forks": 0,
      "stars": 2,
      "watchers": 0,
      "open_issues_and_prs": 12
    },
    "ai_readiness": {
      "has_nix": false,
      "example_dirs": [
        "examples"
      ],
      "has_llms_txt": false,
      "has_dockerfile": false,
      "has_mcp_signal": false,
      "bootstrap_files": [
        "Makefile"
      ],
      "api_schema_files": [],
      "has_devcontainer": false,
      "typecheck_configs": [
        "configs/mypy.ini",
        "packages/agentic-proteins/src/agentic_proteins/py.typed",
        "packages/bijux-proteomics-core/src/bijux_proteomics/py.typed",
        "packages/bijux-proteomics-dev/src/bijux_proteomics_dev/py.typed",
        "packages/bijux-proteomics-foundation/src/bijux_proteomics_foundation/py.typed",
        "packages/bijux-proteomics-intelligence/src/bijux_proteomics_intelligence/py.typed",
        "packages/bijux-proteomics-knowledge/src/bijux_proteomics_knowledge/py.typed",
        "packages/bijux-proteomics-lab/src/bijux_proteomics_lab/py.typed",
        "packages/bijux-proteomics-runtime/src/bijux_proteomics_runtime/py.typed",
        "packages/bijux-proteomics/src/bijux_proteomics_alias/py.typed",
        "packages/proteomics-core/src/proteomics_core/py.typed",
        "packages/proteomics-foundation/src/proteomics_foundation/py.typed",
        "packages/proteomics-intelligence/src/proteomics_intelligence/py.typed",
        "packages/proteomics-knowledge/src/proteomics_knowledge/py.typed",
        "packages/proteomics-lab/src/proteomics_lab/py.typed",
        "packages/proteomics-runtime/src/proteomics_runtime/py.typed",
        "packages/proteomics/src/proteomics/py.typed"
      ],
      "largest_source_bytes": 576731,
      "source_files_sampled": 3667,
      "oversized_source_files": 12,
      "agent_instruction_files": [],
      "agent_instruction_max_bytes": null
    },
    "dependencies": {
      "manifests": [
        "configs/package.json",
        "pyproject.toml"
      ],
      "ecosystems": [
        "npm",
        "pypi"
      ],
      "dependencies": [],
      "all_dependencies": {
        "error": null,
        "source": "github-sbom",
        "packages": [
          {
            "name": "@borewit/text-codec",
            "direct": false,
            "version": "0.2.2",
            "ecosystem": "npm"
          },
          {
            "name": "@inquirer/core",
            "direct": false,
            "version": "6.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "@inquirer/select",
            "direct": false,
            "version": "1.3.3",
            "ecosystem": "npm"
          },
          {
            "name": "@inquirer/type",
            "direct": false,
            "version": "1.5.5",
            "ecosystem": "npm"
          },
          {
            "name": "@lukeed/csprng",
            "direct": false,
            "version": "1.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "@nestjs/axios",
            "direct": false,
            "version": "4.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "@nestjs/common",
            "direct": false,
            "version": "11.1.27",
            "ecosystem": "npm"
          },
          {
            "name": "@nestjs/core",
            "direct": false,
            "version": "11.1.27",
            "ecosystem": "npm"
          },
          {
            "name": "@nuxtjs/opencollective",
            "direct": false,
            "version": "0.3.2",
            "ecosystem": "npm"
          },
          {
            "name": "@openapitools/openapi-generator-cli",
            "direct": false,
            "version": "2.39.1",
            "ecosystem": "npm"
          },
          {
            "name": "@redocly/cli",
            "direct": false,
            "version": "2.37.0",
            "ecosystem": "npm"
          },
          {
            "name": "@tokenizer/inflate",
            "direct": false,
            "version": "0.4.1",
            "ecosystem": "npm"
          },
          {
            "name": "@tokenizer/token",
            "direct": false,
            "version": "0.3.0",
            "ecosystem": "npm"
          },
          {
            "name": "@types/mute-stream",
            "direct": false,
            "version": "0.0.4",
            "ecosystem": "npm"
          },
          {
            "name": "@types/node",
            "direct": false,
            "version": "20.19.39",
            "ecosystem": "npm"
          },
          {
            "name": "@types/node",
            "direct": false,
            "version": "25.5.2",
            "ecosystem": "npm"
          },
          {
            "name": "@types/wrap-ansi",
            "direct": false,
            "version": "3.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "agent-base",
            "direct": false,
            "version": "6.0.2",
            "ecosystem": "npm"
          },
          {
            "name": "agent-base",
            "direct": false,
            "version": "9.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "ansi-escapes",
            "direct": false,
            "version": "4.3.2",
            "ecosystem": "npm"
          },
          {
            "name": "ansi-regex",
            "direct": false,
            "version": "5.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "ansi-regex",
            "direct": false,
            "version": "6.2.2",
            "ecosystem": "npm"
          },
          {
            "name": "ansi-styles",
            "direct": false,
            "version": "4.3.0",
            "ecosystem": "npm"
          },
          {
            "name": "ansi-styles",
            "direct": false,
            "version": "6.2.3",
            "ecosystem": "npm"
          },
          {
            "name": "ast-types",
            "direct": false,
            "version": "0.13.4",
            "ecosystem": "npm"
          },
          {
            "name": "asynckit",
            "direct": false,
            "version": "0.4.0",
            "ecosystem": "npm"
          },
          {
            "name": "axios",
            "direct": false,
            "version": "1.16.1",
            "ecosystem": "npm"
          },
          {
            "name": "balanced-match",
            "direct": false,
            "version": "4.0.4",
            "ecosystem": "npm"
          },
          {
            "name": "basic-ftp",
            "direct": false,
            "version": "5.3.1",
            "ecosystem": "npm"
          },
          {
            "name": "brace-expansion",
            "direct": false,
            "version": "5.0.6",
            "ecosystem": "npm"
          },
          {
            "name": "call-bind-apply-helpers",
            "direct": false,
            "version": "1.0.2",
            "ecosystem": "npm"
          },
          {
            "name": "chalk",
            "direct": false,
            "version": "4.1.2",
            "ecosystem": "npm"
          },
          {
            "name": "chalk",
            "direct": false,
            "version": "5.6.2",
            "ecosystem": "npm"
          },
          {
            "name": "cli-spinners",
            "direct": false,
            "version": "2.9.2",
            "ecosystem": "npm"
          },
          {
            "name": "cli-width",
            "direct": false,
            "version": "4.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "cliui",
            "direct": false,
            "version": "9.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "clone",
            "direct": false,
            "version": "1.0.4",
            "ecosystem": "npm"
          },
          {
            "name": "color-convert",
            "direct": false,
            "version": "2.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "color-name",
            "direct": false,
            "version": "1.1.4",
            "ecosystem": "npm"
          },
          {
            "name": "combined-stream",
            "direct": false,
            "version": "1.0.8",
            "ecosystem": "npm"
          },
          {
            "name": "commander",
            "direct": false,
            "version": "8.3.0",
            "ecosystem": "npm"
          },
          {
            "name": "compare-versions",
            "direct": false,
            "version": "6.1.1",
            "ecosystem": "npm"
          },
          {
            "name": "concurrently",
            "direct": false,
            "version": "10.0.3",
            "ecosystem": "npm"
          },
          {
            "name": "consola",
            "direct": false,
            "version": "2.15.3",
            "ecosystem": "npm"
          },
          {
            "name": "console.table",
            "direct": false,
            "version": "0.10.0",
            "ecosystem": "npm"
          },
          {
            "name": "data-uri-to-buffer",
            "direct": false,
            "version": "8.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "debug",
            "direct": false,
            "version": "4.4.3",
            "ecosystem": "npm"
          },
          {
            "name": "defaults",
            "direct": false,
            "version": "1.0.4",
            "ecosystem": "npm"
          },
          {
            "name": "degenerator",
            "direct": false,
            "version": "7.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "delayed-stream",
            "direct": false,
            "version": "1.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "dunder-proto",
            "direct": false,
            "version": "1.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "easy-table",
            "direct": false,
            "version": "1.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "emoji-regex",
            "direct": false,
            "version": "10.6.0",
            "ecosystem": "npm"
          },
          {
            "name": "emoji-regex",
            "direct": false,
            "version": "8.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "es-define-property",
            "direct": false,
            "version": "1.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "es-errors",
            "direct": false,
            "version": "1.3.0",
            "ecosystem": "npm"
          },
          {
            "name": "es-object-atoms",
            "direct": false,
            "version": "1.1.1",
            "ecosystem": "npm"
          },
          {
            "name": "es-set-tostringtag",
            "direct": false,
            "version": "2.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "escalade",
            "direct": false,
            "version": "3.2.0",
            "ecosystem": "npm"
          },
          {
            "name": "escape-string-regexp",
            "direct": false,
            "version": "1.0.5",
            "ecosystem": "npm"
          },
          {
            "name": "escodegen",
            "direct": false,
            "version": "2.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "esprima",
            "direct": false,
            "version": "4.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "estraverse",
            "direct": false,
            "version": "5.3.0",
            "ecosystem": "npm"
          },
          {
            "name": "esutils",
            "direct": false,
            "version": "2.0.3",
            "ecosystem": "npm"
          },
          {
            "name": "fast-safe-stringify",
            "direct": false,
            "version": "2.1.1",
            "ecosystem": "npm"
          },
          {
            "name": "figures",
            "direct": false,
            "version": "3.2.0",
            "ecosystem": "npm"
          },
          {
            "name": "file-type",
            "direct": false,
            "version": "21.3.4",
            "ecosystem": "npm"
          },
          {
            "name": "follow-redirects",
            "direct": false,
            "version": "1.16.0",
            "ecosystem": "npm"
          },
          {
            "name": "form-data",
            "direct": false,
            "version": "4.0.6",
            "ecosystem": "npm"
          },
          {
            "name": "fs-extra",
            "direct": false,
            "version": "11.3.6",
            "ecosystem": "npm"
          },
          {
            "name": "function-bind",
            "direct": false,
            "version": "1.1.2",
            "ecosystem": "npm"
          },
          {
            "name": "get-caller-file",
            "direct": false,
            "version": "2.0.5",
            "ecosystem": "npm"
          },
          {
            "name": "get-east-asian-width",
            "direct": false,
            "version": "1.6.0",
            "ecosystem": "npm"
          },
          {
            "name": "get-intrinsic",
            "direct": false,
            "version": "1.3.0",
            "ecosystem": "npm"
          },
          {
            "name": "get-proto",
            "direct": false,
            "version": "1.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "get-uri",
            "direct": false,
            "version": "8.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "glob",
            "direct": false,
            "version": "13.0.6",
            "ecosystem": "npm"
          },
          {
            "name": "gopd",
            "direct": false,
            "version": "1.2.0",
            "ecosystem": "npm"
          },
          {
            "name": "graceful-fs",
            "direct": false,
            "version": "4.2.11",
            "ecosystem": "npm"
          },
          {
            "name": "has-flag",
            "direct": false,
            "version": "4.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "has-symbols",
            "direct": false,
            "version": "1.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "has-tostringtag",
            "direct": false,
            "version": "1.0.2",
            "ecosystem": "npm"
          },
          {
            "name": "hasown",
            "direct": false,
            "version": "2.0.4",
            "ecosystem": "npm"
          },
          {
            "name": "http-proxy-agent",
            "direct": false,
            "version": "9.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "https-proxy-agent",
            "direct": false,
            "version": "5.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "https-proxy-agent",
            "direct": false,
            "version": "9.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "ieee754",
            "direct": false,
            "version": "1.2.1",
            "ecosystem": "npm"
          },
          {
            "name": "ip-address",
            "direct": false,
            "version": "10.2.0",
            "ecosystem": "npm"
          },
          {
            "name": "is-fullwidth-code-point",
            "direct": false,
            "version": "3.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "iterare",
            "direct": false,
            "version": "1.2.1",
            "ecosystem": "npm"
          },
          {
            "name": "jsonfile",
            "direct": false,
            "version": "6.2.1",
            "ecosystem": "npm"
          },
          {
            "name": "load-esm",
            "direct": false,
            "version": "1.0.3",
            "ecosystem": "npm"
          },
          {
            "name": "lru-cache",
            "direct": false,
            "version": "11.2.7",
            "ecosystem": "npm"
          },
          {
            "name": "lru-cache",
            "direct": false,
            "version": "7.18.3",
            "ecosystem": "npm"
          },
          {
            "name": "math-intrinsics",
            "direct": false,
            "version": "1.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "mime-db",
            "direct": false,
            "version": "1.52.0",
            "ecosystem": "npm"
          },
          {
            "name": "mime-types",
            "direct": false,
            "version": "2.1.35",
            "ecosystem": "npm"
          },
          {
            "name": "minimatch",
            "direct": false,
            "version": "10.2.5",
            "ecosystem": "npm"
          },
          {
            "name": "minipass",
            "direct": false,
            "version": "7.1.3",
            "ecosystem": "npm"
          },
          {
            "name": "ms",
            "direct": false,
            "version": "2.1.3",
            "ecosystem": "npm"
          },
          {
            "name": "mute-stream",
            "direct": false,
            "version": "1.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "netmask",
            "direct": false,
            "version": "2.1.1",
            "ecosystem": "npm"
          },
          {
            "name": "node-fetch",
            "direct": false,
            "version": "2.7.0",
            "ecosystem": "npm"
          },
          {
            "name": "pac-proxy-agent",
            "direct": false,
            "version": "9.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "pac-resolver",
            "direct": false,
            "version": "9.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "path-scurry",
            "direct": false,
            "version": "2.0.2",
            "ecosystem": "npm"
          },
          {
            "name": "path-to-regexp",
            "direct": false,
            "version": "8.4.2",
            "ecosystem": "npm"
          },
          {
            "name": "proxy-agent",
            "direct": false,
            "version": "8.0.2",
            "ecosystem": "npm"
          },
          {
            "name": "proxy-agent-negotiate",
            "direct": false,
            "version": "1.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "proxy-from-env",
            "direct": false,
            "version": "2.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "quickjs-wasi",
            "direct": false,
            "version": "2.2.0",
            "ecosystem": "npm"
          },
          {
            "name": "reflect-metadata",
            "direct": false,
            "version": "0.2.2",
            "ecosystem": "npm"
          },
          {
            "name": "run-async",
            "direct": false,
            "version": "3.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "rxjs",
            "direct": false,
            "version": "7.8.2",
            "ecosystem": "npm"
          },
          {
            "name": "shell-quote",
            "direct": false,
            "version": "1.8.4",
            "ecosystem": "npm"
          },
          {
            "name": "signal-exit",
            "direct": false,
            "version": "4.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "smart-buffer",
            "direct": false,
            "version": "4.2.0",
            "ecosystem": "npm"
          },
          {
            "name": "socks",
            "direct": false,
            "version": "2.8.9",
            "ecosystem": "npm"
          },
          {
            "name": "socks-proxy-agent",
            "direct": false,
            "version": "10.1.0",
            "ecosystem": "npm"
          },
          {
            "name": "source-map",
            "direct": false,
            "version": "0.6.1",
            "ecosystem": "npm"
          },
          {
            "name": "string-width",
            "direct": false,
            "version": "4.2.3",
            "ecosystem": "npm"
          },
          {
            "name": "string-width",
            "direct": false,
            "version": "7.2.0",
            "ecosystem": "npm"
          },
          {
            "name": "strip-ansi",
            "direct": false,
            "version": "6.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "strip-ansi",
            "direct": false,
            "version": "7.2.0",
            "ecosystem": "npm"
          },
          {
            "name": "strtok3",
            "direct": false,
            "version": "10.3.5",
            "ecosystem": "npm"
          },
          {
            "name": "supports-color",
            "direct": false,
            "version": "10.2.2",
            "ecosystem": "npm"
          },
          {
            "name": "supports-color",
            "direct": false,
            "version": "7.2.0",
            "ecosystem": "npm"
          },
          {
            "name": "token-types",
            "direct": false,
            "version": "6.1.2",
            "ecosystem": "npm"
          },
          {
            "name": "tr46",
            "direct": false,
            "version": "0.0.3",
            "ecosystem": "npm"
          },
          {
            "name": "tree-kill",
            "direct": false,
            "version": "1.2.2",
            "ecosystem": "npm"
          },
          {
            "name": "tslib",
            "direct": false,
            "version": "2.8.1",
            "ecosystem": "npm"
          },
          {
            "name": "type-fest",
            "direct": false,
            "version": "0.21.3",
            "ecosystem": "npm"
          },
          {
            "name": "uid",
            "direct": false,
            "version": "2.0.2",
            "ecosystem": "npm"
          },
          {
            "name": "uint8array-extras",
            "direct": false,
            "version": "1.5.0",
            "ecosystem": "npm"
          },
          {
            "name": "undici-types",
            "direct": false,
            "version": "6.21.0",
            "ecosystem": "npm"
          },
          {
            "name": "undici-types",
            "direct": false,
            "version": "7.18.2",
            "ecosystem": "npm"
          },
          {
            "name": "universalify",
            "direct": false,
            "version": "2.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "wcwidth",
            "direct": false,
            "version": "1.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "webidl-conversions",
            "direct": false,
            "version": "3.0.1",
            "ecosystem": "npm"
          },
          {
            "name": "whatwg-url",
            "direct": false,
            "version": "5.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "wrap-ansi",
            "direct": false,
            "version": "6.2.0",
            "ecosystem": "npm"
          },
          {
            "name": "wrap-ansi",
            "direct": false,
            "version": "9.0.2",
            "ecosystem": "npm"
          },
          {
            "name": "y18n",
            "direct": false,
            "version": "5.0.8",
            "ecosystem": "npm"
          },
          {
            "name": "yargs",
            "direct": false,
            "version": "18.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "yargs-parser",
            "direct": false,
            "version": "22.0.0",
            "ecosystem": "npm"
          },
          {
            "name": "agentic-proteins",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "aiohappyeyeballs",
            "direct": false,
            "version": "2.6.1",
            "ecosystem": "pypi"
          },
          {
            "name": "aiohttp",
            "direct": false,
            "version": "3.14.1",
            "ecosystem": "pypi"
          },
          {
            "name": "aiosignal",
            "direct": false,
            "version": "1.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "annotated-doc",
            "direct": false,
            "version": "0.0.4",
            "ecosystem": "pypi"
          },
          {
            "name": "annotated-types",
            "direct": false,
            "version": "0.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "anyio",
            "direct": false,
            "version": "4.13.0",
            "ecosystem": "pypi"
          },
          {
            "name": "arq",
            "direct": false,
            "version": "0.27.0",
            "ecosystem": "pypi"
          },
          {
            "name": "ast-serialize",
            "direct": false,
            "version": "0.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "async-timeout",
            "direct": false,
            "version": "5.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "attrs",
            "direct": false,
            "version": "26.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "babel",
            "direct": false,
            "version": "2.18.0",
            "ecosystem": "pypi"
          },
          {
            "name": "backports-tarfile",
            "direct": false,
            "version": "1.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "backports-zstd",
            "direct": false,
            "version": "1.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "backrefs",
            "direct": false,
            "version": "6.2",
            "ecosystem": "pypi"
          },
          {
            "name": "bandit",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "bandit",
            "direct": false,
            "version": "1.9.4",
            "ecosystem": "pypi"
          },
          {
            "name": "bijux-proteomics-core",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "bijux-proteomics-foundation",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "bijux-proteomics-intelligence",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "bijux-proteomics-knowledge",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "bijux-proteomics-lab",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "bijux-proteomics-runtime",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "biopython",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "biopython",
            "direct": false,
            "version": "1.87",
            "ecosystem": "pypi"
          },
          {
            "name": "boolean-py",
            "direct": false,
            "version": "5.0",
            "ecosystem": "pypi"
          },
          {
            "name": "build",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "build",
            "direct": false,
            "version": "1.4.2",
            "ecosystem": "pypi"
          },
          {
            "name": "cachecontrol",
            "direct": false,
            "version": "0.14.4",
            "ecosystem": "pypi"
          },
          {
            "name": "certifi",
            "direct": false,
            "version": "2026.2.25",
            "ecosystem": "pypi"
          },
          {
            "name": "cffi",
            "direct": false,
            "version": "2.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "chardet",
            "direct": false,
            "version": "7.4.1",
            "ecosystem": "pypi"
          },
          {
            "name": "charset-normalizer",
            "direct": false,
            "version": "3.4.7",
            "ecosystem": "pypi"
          },
          {
            "name": "click",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "click",
            "direct": false,
            "version": "8.3.2",
            "ecosystem": "pypi"
          },
          {
            "name": "codespell",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "codespell",
            "direct": false,
            "version": "2.4.2",
            "ecosystem": "pypi"
          },
          {
            "name": "colorama",
            "direct": false,
            "version": "0.4.6",
            "ecosystem": "pypi"
          },
          {
            "name": "coverage",
            "direct": false,
            "version": "7.13.5",
            "ecosystem": "pypi"
          },
          {
            "name": "cryptography",
            "direct": false,
            "version": "49.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "cyclonedx-python-lib",
            "direct": false,
            "version": "11.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "dataclasses-json",
            "direct": false,
            "version": "0.6.7",
            "ecosystem": "pypi"
          },
          {
            "name": "defusedxml",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "defusedxml",
            "direct": false,
            "version": "0.7.1",
            "ecosystem": "pypi"
          },
          {
            "name": "deprecated",
            "direct": false,
            "version": "1.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "deptry",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "deptry",
            "direct": false,
            "version": "0.25.1",
            "ecosystem": "pypi"
          },
          {
            "name": "distlib",
            "direct": false,
            "version": "0.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "distro",
            "direct": false,
            "version": "1.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "docutils",
            "direct": false,
            "version": "0.22.4",
            "ecosystem": "pypi"
          },
          {
            "name": "einops",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "einops",
            "direct": false,
            "version": "0.8.2",
            "ecosystem": "pypi"
          },
          {
            "name": "fastapi",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "fastapi",
            "direct": false,
            "version": "0.135.3",
            "ecosystem": "pypi"
          },
          {
            "name": "filelock",
            "direct": false,
            "version": "3.25.2",
            "ecosystem": "pypi"
          },
          {
            "name": "frozenlist",
            "direct": false,
            "version": "1.8.0",
            "ecosystem": "pypi"
          },
          {
            "name": "fsspec",
            "direct": false,
            "version": "2026.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "gemmi",
            "direct": false,
            "version": "0.7.5",
            "ecosystem": "pypi"
          },
          {
            "name": "ghp-import",
            "direct": false,
            "version": "2.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "gitdb",
            "direct": false,
            "version": "4.0.12",
            "ecosystem": "pypi"
          },
          {
            "name": "gitpython",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "gitpython",
            "direct": false,
            "version": "3.1.50",
            "ecosystem": "pypi"
          },
          {
            "name": "greenlet",
            "direct": false,
            "version": "3.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "h11",
            "direct": false,
            "version": "0.16.0",
            "ecosystem": "pypi"
          },
          {
            "name": "hatch",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "hatch",
            "direct": false,
            "version": "1.16.5",
            "ecosystem": "pypi"
          },
          {
            "name": "hatch-fancy-pypi-readme",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "hatch-vcs",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "hatchling",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "hatchling",
            "direct": false,
            "version": "1.30.1",
            "ecosystem": "pypi"
          },
          {
            "name": "hf-xet",
            "direct": false,
            "version": "1.4.3",
            "ecosystem": "pypi"
          },
          {
            "name": "hiredis",
            "direct": false,
            "version": "3.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "httpcore",
            "direct": false,
            "version": "1.0.9",
            "ecosystem": "pypi"
          },
          {
            "name": "httpx",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "httpx",
            "direct": false,
            "version": "0.28.1",
            "ecosystem": "pypi"
          },
          {
            "name": "httpx-sse",
            "direct": false,
            "version": "0.4.3",
            "ecosystem": "pypi"
          },
          {
            "name": "huggingface-hub",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "huggingface-hub",
            "direct": false,
            "version": "1.11.0",
            "ecosystem": "pypi"
          },
          {
            "name": "hyperlink",
            "direct": false,
            "version": "21.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "hypothesis",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "hypothesis",
            "direct": false,
            "version": "6.151.12",
            "ecosystem": "pypi"
          },
          {
            "name": "hypothesis-jsonschema",
            "direct": false,
            "version": "0.23.1",
            "ecosystem": "pypi"
          },
          {
            "name": "id",
            "direct": false,
            "version": "1.6.1",
            "ecosystem": "pypi"
          },
          {
            "name": "idna",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "idna",
            "direct": false,
            "version": "3.18",
            "ecosystem": "pypi"
          },
          {
            "name": "immutabledict",
            "direct": false,
            "version": "4.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "importlab",
            "direct": false,
            "version": "0.8.1",
            "ecosystem": "pypi"
          },
          {
            "name": "importlib-metadata",
            "direct": false,
            "version": "9.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "iniconfig",
            "direct": false,
            "version": "2.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "interrogate",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "interrogate",
            "direct": false,
            "version": "1.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jaraco-classes",
            "direct": false,
            "version": "3.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jaraco-context",
            "direct": false,
            "version": "6.1.2",
            "ecosystem": "pypi"
          },
          {
            "name": "jaraco-functools",
            "direct": false,
            "version": "4.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jeepney",
            "direct": false,
            "version": "0.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jinja2",
            "direct": false,
            "version": "3.1.6",
            "ecosystem": "pypi"
          },
          {
            "name": "jsonpatch",
            "direct": false,
            "version": "1.33",
            "ecosystem": "pypi"
          },
          {
            "name": "jsonpointer",
            "direct": false,
            "version": "3.1.1",
            "ecosystem": "pypi"
          },
          {
            "name": "jsonschema",
            "direct": false,
            "version": "4.24.1",
            "ecosystem": "pypi"
          },
          {
            "name": "jsonschema-path",
            "direct": false,
            "version": "0.4.5",
            "ecosystem": "pypi"
          },
          {
            "name": "jsonschema-specifications",
            "direct": false,
            "version": "2025.9.1",
            "ecosystem": "pypi"
          },
          {
            "name": "keyring",
            "direct": false,
            "version": "25.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "langchain-classic",
            "direct": false,
            "version": "1.0.7",
            "ecosystem": "pypi"
          },
          {
            "name": "langchain-community",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "langchain-community",
            "direct": false,
            "version": "0.4.1",
            "ecosystem": "pypi"
          },
          {
            "name": "langchain-core",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "langchain-core",
            "direct": false,
            "version": "1.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "langchain-huggingface",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "langchain-huggingface",
            "direct": false,
            "version": "1.2.1",
            "ecosystem": "pypi"
          },
          {
            "name": "langchain-protocol",
            "direct": false,
            "version": "0.0.15",
            "ecosystem": "pypi"
          },
          {
            "name": "langchain-text-splitters",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "langchain-text-splitters",
            "direct": false,
            "version": "1.1.2",
            "ecosystem": "pypi"
          },
          {
            "name": "langsmith",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "langsmith",
            "direct": false,
            "version": "0.9.3",
            "ecosystem": "pypi"
          },
          {
            "name": "lazy-object-proxy",
            "direct": false,
            "version": "1.12.0",
            "ecosystem": "pypi"
          },
          {
            "name": "libcst",
            "direct": false,
            "version": "1.8.6",
            "ecosystem": "pypi"
          },
          {
            "name": "librt",
            "direct": false,
            "version": "0.11.0",
            "ecosystem": "pypi"
          },
          {
            "name": "license-expression",
            "direct": false,
            "version": "30.4.4",
            "ecosystem": "pypi"
          },
          {
            "name": "limits",
            "direct": false,
            "version": "5.8.0",
            "ecosystem": "pypi"
          },
          {
            "name": "loguru",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "loguru",
            "direct": false,
            "version": "0.7.3",
            "ecosystem": "pypi"
          },
          {
            "name": "mando",
            "direct": false,
            "version": "0.7.1",
            "ecosystem": "pypi"
          },
          {
            "name": "markdown",
            "direct": false,
            "version": "3.10.2",
            "ecosystem": "pypi"
          },
          {
            "name": "markdown-it-py",
            "direct": false,
            "version": "4.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "markupsafe",
            "direct": false,
            "version": "3.0.3",
            "ecosystem": "pypi"
          },
          {
            "name": "marshmallow",
            "direct": false,
            "version": "3.26.2",
            "ecosystem": "pypi"
          },
          {
            "name": "mdurl",
            "direct": false,
            "version": "0.1.2",
            "ecosystem": "pypi"
          },
          {
            "name": "mergedeep",
            "direct": false,
            "version": "1.3.4",
            "ecosystem": "pypi"
          },
          {
            "name": "mkdocs",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "mkdocs",
            "direct": false,
            "version": "1.6.1",
            "ecosystem": "pypi"
          },
          {
            "name": "mkdocs-autorefs",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "mkdocs-autorefs",
            "direct": false,
            "version": "1.4.4",
            "ecosystem": "pypi"
          },
          {
            "name": "mkdocs-get-deps",
            "direct": false,
            "version": "0.2.2",
            "ecosystem": "pypi"
          },
          {
            "name": "mkdocs-git-revision-date-localized-plugin",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "mkdocs-git-revision-date-localized-plugin",
            "direct": false,
            "version": "1.5.1",
            "ecosystem": "pypi"
          },
          {
            "name": "mkdocs-material",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "mkdocs-material",
            "direct": false,
            "version": "9.7.6",
            "ecosystem": "pypi"
          },
          {
            "name": "mkdocs-material-extensions",
            "direct": false,
            "version": "1.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "mkdocs-redirects",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "mkdocs-redirects",
            "direct": false,
            "version": "1.2.3",
            "ecosystem": "pypi"
          },
          {
            "name": "more-itertools",
            "direct": false,
            "version": "11.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "msgpack",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "msgpack",
            "direct": false,
            "version": "1.2.1",
            "ecosystem": "pypi"
          },
          {
            "name": "msgspec",
            "direct": false,
            "version": "0.20.0",
            "ecosystem": "pypi"
          },
          {
            "name": "multidict",
            "direct": false,
            "version": "6.7.1",
            "ecosystem": "pypi"
          },
          {
            "name": "mypy",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "mypy",
            "direct": false,
            "version": "2.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "mypy-extensions",
            "direct": false,
            "version": "1.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "networkx",
            "direct": false,
            "version": "3.6.1",
            "ecosystem": "pypi"
          },
          {
            "name": "nh3",
            "direct": false,
            "version": "0.3.4",
            "ecosystem": "pypi"
          },
          {
            "name": "ninja",
            "direct": false,
            "version": "1.13.0",
            "ecosystem": "pypi"
          },
          {
            "name": "nodeenv",
            "direct": false,
            "version": "1.10.0",
            "ecosystem": "pypi"
          },
          {
            "name": "numpy",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "numpy",
            "direct": false,
            "version": "1.26.4",
            "ecosystem": "pypi"
          },
          {
            "name": "numpy",
            "direct": false,
            "version": "2.4.4",
            "ecosystem": "pypi"
          },
          {
            "name": "openapi-schema-validator",
            "direct": false,
            "version": "0.8.1",
            "ecosystem": "pypi"
          },
          {
            "name": "openapi-spec-validator",
            "direct": false,
            "version": "0.8.4",
            "ecosystem": "pypi"
          },
          {
            "name": "openprotein-python",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "openprotein-python",
            "direct": false,
            "version": "0.12.1",
            "ecosystem": "pypi"
          },
          {
            "name": "orjson",
            "direct": false,
            "version": "3.11.8",
            "ecosystem": "pypi"
          },
          {
            "name": "packageurl-python",
            "direct": false,
            "version": "0.17.6",
            "ecosystem": "pypi"
          },
          {
            "name": "packaging",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "packaging",
            "direct": false,
            "version": "25.0",
            "ecosystem": "pypi"
          },
          {
            "name": "paginate",
            "direct": false,
            "version": "0.5.7",
            "ecosystem": "pypi"
          },
          {
            "name": "pandas",
            "direct": false,
            "version": "2.3.3",
            "ecosystem": "pypi"
          },
          {
            "name": "pathable",
            "direct": false,
            "version": "0.5.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pathspec",
            "direct": false,
            "version": "1.0.4",
            "ecosystem": "pypi"
          },
          {
            "name": "pexpect",
            "direct": false,
            "version": "4.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pip",
            "direct": false,
            "version": "26.1",
            "ecosystem": "pypi"
          },
          {
            "name": "pip-api",
            "direct": false,
            "version": "0.0.34",
            "ecosystem": "pypi"
          },
          {
            "name": "pip-audit",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pip-audit",
            "direct": false,
            "version": "2.10.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pip-requirements-parser",
            "direct": false,
            "version": "32.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "platformdirs",
            "direct": false,
            "version": "4.9.4",
            "ecosystem": "pypi"
          },
          {
            "name": "pluggy",
            "direct": false,
            "version": "1.6.0",
            "ecosystem": "pypi"
          },
          {
            "name": "prance",
            "direct": false,
            "version": "25.4.8.0",
            "ecosystem": "pypi"
          },
          {
            "name": "propcache",
            "direct": false,
            "version": "0.4.1",
            "ecosystem": "pypi"
          },
          {
            "name": "properdocs",
            "direct": false,
            "version": "1.6.7",
            "ecosystem": "pypi"
          },
          {
            "name": "ptyprocess",
            "direct": false,
            "version": "0.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "py",
            "direct": false,
            "version": "1.11.0",
            "ecosystem": "pypi"
          },
          {
            "name": "py-cpuinfo",
            "direct": false,
            "version": "9.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "py-serializable",
            "direct": false,
            "version": "2.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pyarrow",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pyarrow",
            "direct": false,
            "version": "24.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pycnite",
            "direct": false,
            "version": "2024.7.31",
            "ecosystem": "pypi"
          },
          {
            "name": "pycparser",
            "direct": false,
            "version": "3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pydantic",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pydantic",
            "direct": false,
            "version": "2.12.5",
            "ecosystem": "pypi"
          },
          {
            "name": "pydantic-core",
            "direct": false,
            "version": "2.41.5",
            "ecosystem": "pypi"
          },
          {
            "name": "pydantic-settings",
            "direct": false,
            "version": "2.14.2",
            "ecosystem": "pypi"
          },
          {
            "name": "pydocstyle",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pydocstyle",
            "direct": false,
            "version": "6.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pydot",
            "direct": false,
            "version": "4.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "pyfakefs",
            "direct": false,
            "version": "6.1.6",
            "ecosystem": "pypi"
          },
          {
            "name": "pygments",
            "direct": false,
            "version": "2.20.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pyjwt",
            "direct": false,
            "version": "2.13.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pymdown-extensions",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pymdown-extensions",
            "direct": false,
            "version": "10.21.3",
            "ecosystem": "pypi"
          },
          {
            "name": "pyparsing",
            "direct": false,
            "version": "3.3.2",
            "ecosystem": "pypi"
          },
          {
            "name": "pyproject-hooks",
            "direct": false,
            "version": "1.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pyright",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pyright",
            "direct": false,
            "version": "1.1.409",
            "ecosystem": "pypi"
          },
          {
            "name": "pytest",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pytest",
            "direct": false,
            "version": "9.1.1",
            "ecosystem": "pypi"
          },
          {
            "name": "pytest-asyncio",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pytest-asyncio",
            "direct": false,
            "version": "1.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pytest-benchmark",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pytest-benchmark",
            "direct": false,
            "version": "5.2.3",
            "ecosystem": "pypi"
          },
          {
            "name": "pytest-cov",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pytest-cov",
            "direct": false,
            "version": "7.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pytest-mock",
            "direct": false,
            "version": "3.15.1",
            "ecosystem": "pypi"
          },
          {
            "name": "pytest-rerunfailures",
            "direct": false,
            "version": "13.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pytest-timeout",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pytest-timeout",
            "direct": false,
            "version": "2.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "python-dateutil",
            "direct": false,
            "version": "2.9.0.post0",
            "ecosystem": "pypi"
          },
          {
            "name": "python-discovery",
            "direct": false,
            "version": "1.2.2",
            "ecosystem": "pypi"
          },
          {
            "name": "python-dotenv",
            "direct": false,
            "version": "1.2.2",
            "ecosystem": "pypi"
          },
          {
            "name": "pytype",
            "direct": false,
            "version": "2024.10.11",
            "ecosystem": "pypi"
          },
          {
            "name": "pytz",
            "direct": false,
            "version": "2026.1.post1",
            "ecosystem": "pypi"
          },
          {
            "name": "pywin32-ctypes",
            "direct": false,
            "version": "0.2.3",
            "ecosystem": "pypi"
          },
          {
            "name": "pyyaml",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pyyaml",
            "direct": false,
            "version": "6.0.3",
            "ecosystem": "pypi"
          },
          {
            "name": "pyyaml-env-tag",
            "direct": false,
            "version": "1.1",
            "ecosystem": "pypi"
          },
          {
            "name": "pyyaml-ft",
            "direct": false,
            "version": "8.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "radon",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "radon",
            "direct": false,
            "version": "6.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "readme-renderer",
            "direct": false,
            "version": "44.0",
            "ecosystem": "pypi"
          },
          {
            "name": "redis",
            "direct": false,
            "version": "5.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "referencing",
            "direct": false,
            "version": "0.37.0",
            "ecosystem": "pypi"
          },
          {
            "name": "regex",
            "direct": false,
            "version": "2026.4.4",
            "ecosystem": "pypi"
          },
          {
            "name": "requests",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "requests",
            "direct": false,
            "version": "2.33.1",
            "ecosystem": "pypi"
          },
          {
            "name": "requests-toolbelt",
            "direct": false,
            "version": "1.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "requirements-parser",
            "direct": false,
            "version": "0.13.0",
            "ecosystem": "pypi"
          },
          {
            "name": "rfc3339-validator",
            "direct": false,
            "version": "0.1.4",
            "ecosystem": "pypi"
          },
          {
            "name": "rfc3986",
            "direct": false,
            "version": "2.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "rich",
            "direct": false,
            "version": "14.3.3",
            "ecosystem": "pypi"
          },
          {
            "name": "rpds-py",
            "direct": false,
            "version": "0.30.0",
            "ecosystem": "pypi"
          },
          {
            "name": "ruamel-yaml",
            "direct": false,
            "version": "0.19.1",
            "ecosystem": "pypi"
          },
          {
            "name": "ruff",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "ruff",
            "direct": false,
            "version": "0.15.9",
            "ecosystem": "pypi"
          },
          {
            "name": "safetensors",
            "direct": false,
            "version": "0.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "secretstorage",
            "direct": false,
            "version": "3.5.0",
            "ecosystem": "pypi"
          },
          {
            "name": "shellingham",
            "direct": false,
            "version": "1.5.4",
            "ecosystem": "pypi"
          },
          {
            "name": "six",
            "direct": false,
            "version": "1.17.0",
            "ecosystem": "pypi"
          },
          {
            "name": "slowapi",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "slowapi",
            "direct": false,
            "version": "0.1.9",
            "ecosystem": "pypi"
          },
          {
            "name": "smmap",
            "direct": false,
            "version": "5.0.3",
            "ecosystem": "pypi"
          },
          {
            "name": "sniffio",
            "direct": false,
            "version": "1.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "snowballstemmer",
            "direct": false,
            "version": "3.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "sortedcontainers",
            "direct": false,
            "version": "2.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "sqlalchemy",
            "direct": false,
            "version": "2.0.49",
            "ecosystem": "pypi"
          },
          {
            "name": "starlette",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "starlette",
            "direct": false,
            "version": "1.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "stevedore",
            "direct": false,
            "version": "5.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "tabulate",
            "direct": false,
            "version": "0.10.0",
            "ecosystem": "pypi"
          },
          {
            "name": "tenacity",
            "direct": false,
            "version": "9.1.4",
            "ecosystem": "pypi"
          },
          {
            "name": "tokenizers",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "tokenizers",
            "direct": false,
            "version": "0.22.2",
            "ecosystem": "pypi"
          },
          {
            "name": "toml",
            "direct": false,
            "version": "0.10.2",
            "ecosystem": "pypi"
          },
          {
            "name": "tomli",
            "direct": false,
            "version": "2.4.1",
            "ecosystem": "pypi"
          },
          {
            "name": "tomli-w",
            "direct": false,
            "version": "1.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "tomlkit",
            "direct": false,
            "version": "0.14.0",
            "ecosystem": "pypi"
          },
          {
            "name": "torch",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "tqdm",
            "direct": false,
            "version": "4.67.3",
            "ecosystem": "pypi"
          },
          {
            "name": "transformers",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "transformers",
            "direct": false,
            "version": "5.5.4",
            "ecosystem": "pypi"
          },
          {
            "name": "trove-classifiers",
            "direct": false,
            "version": "2026.1.14.14",
            "ecosystem": "pypi"
          },
          {
            "name": "twine",
            "direct": false,
            "version": "6.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "typer",
            "direct": false,
            "version": "0.24.1",
            "ecosystem": "pypi"
          },
          {
            "name": "types-colorama",
            "direct": false,
            "version": "0.4.15.20260408",
            "ecosystem": "pypi"
          },
          {
            "name": "types-defusedxml",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "types-defusedxml",
            "direct": false,
            "version": "0.7.0.20260408",
            "ecosystem": "pypi"
          },
          {
            "name": "types-orjson",
            "direct": false,
            "version": "3.6.2",
            "ecosystem": "pypi"
          },
          {
            "name": "types-pexpect",
            "direct": false,
            "version": "4.9.0.20260408",
            "ecosystem": "pypi"
          },
          {
            "name": "types-psutil",
            "direct": false,
            "version": "6.1.0.20241221",
            "ecosystem": "pypi"
          },
          {
            "name": "types-pyyaml",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "types-pyyaml",
            "direct": false,
            "version": "6.0.12.20260408",
            "ecosystem": "pypi"
          },
          {
            "name": "types-requests",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "types-requests",
            "direct": false,
            "version": "2.33.0.20260408",
            "ecosystem": "pypi"
          },
          {
            "name": "typing-extensions",
            "direct": false,
            "version": "4.15.0",
            "ecosystem": "pypi"
          },
          {
            "name": "typing-inspect",
            "direct": false,
            "version": "0.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "typing-inspection",
            "direct": false,
            "version": "0.4.2",
            "ecosystem": "pypi"
          },
          {
            "name": "tzdata",
            "direct": false,
            "version": "2026.1",
            "ecosystem": "pypi"
          },
          {
            "name": "urllib3",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "urllib3",
            "direct": false,
            "version": "2.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "userpath",
            "direct": false,
            "version": "1.9.2",
            "ecosystem": "pypi"
          },
          {
            "name": "uuid-utils",
            "direct": false,
            "version": "0.14.1",
            "ecosystem": "pypi"
          },
          {
            "name": "uv",
            "direct": false,
            "version": "0.11.24",
            "ecosystem": "pypi"
          },
          {
            "name": "uvicorn",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "uvicorn",
            "direct": false,
            "version": "0.44.0",
            "ecosystem": "pypi"
          },
          {
            "name": "virtualenv",
            "direct": false,
            "version": "21.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "vulture",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "vulture",
            "direct": false,
            "version": "2.16",
            "ecosystem": "pypi"
          },
          {
            "name": "watchdog",
            "direct": false,
            "version": "6.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "websockets",
            "direct": false,
            "version": "16.0",
            "ecosystem": "pypi"
          },
          {
            "name": "win32-setctime",
            "direct": false,
            "version": "1.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "wrapt",
            "direct": false,
            "version": "2.1.2",
            "ecosystem": "pypi"
          },
          {
            "name": "xxhash",
            "direct": false,
            "version": "3.6.0",
            "ecosystem": "pypi"
          },
          {
            "name": "yarl",
            "direct": false,
            "version": "1.23.0",
            "ecosystem": "pypi"
          },
          {
            "name": "zipp",
            "direct": false,
            "version": "3.23.0",
            "ecosystem": "pypi"
          },
          {
            "name": "zstandard",
            "direct": false,
            "version": "0.23.0",
            "ecosystem": "pypi"
          }
        ],
        "collected": true,
        "truncated": false,
        "total_count": 447,
        "direct_count": 0,
        "indirect_count": 447
      }
    },
    "maintainership": {
      "issues": {
        "open_prs": 12,
        "merged_prs": 95,
        "open_issues": 0,
        "closed_ratio": null,
        "closed_issues": 0,
        "closed_unmerged_prs": 91
      },
      "bus_factor": 1,
      "top_contributors": [
        {
          "type": "User",
          "login": "bijux",
          "commits": 6845,
          "avatar_url": "https://avatars.githubusercontent.com/u/222414480?u=647e90a042868b52de9c48ddfe64248546a520a2&v=4"
        },
        {
          "type": "Bot",
          "login": "dependabot[bot]",
          "commits": 33,
          "avatar_url": "https://avatars.githubusercontent.com/in/29110?v=4"
        },
        {
          "type": "Bot",
          "login": "github-actions[bot]",
          "commits": 3,
          "avatar_url": "https://avatars.githubusercontent.com/in/15368?v=4"
        }
      ],
      "contributors_sampled": 3,
      "top_contributor_share": 0.995
    },
    "quality_signals": {
      "has_ci": true,
      "has_tests": true,
      "ci_workflows": [
        "automerge-pr.yml",
        "bijux-std.yml",
        "ci.yml",
        "deploy-docs.yml",
        "github-policy.yml",
        "pr-approval-policy.yml",
        "release-artifacts.yml",
        "release-ghcr.yml",
        "release-github.yml",
        "release-pypi.yml",
        "verify.yml"
      ],
      "has_docs_dir": true,
      "linter_configs": [
        "ruff.toml",
        "tox.ini"
      ],
      "has_editorconfig": false,
      "has_linter_config": true,
      "has_precommit_config": false
    },
    "security_signals": {
      "lockfiles": [
        "package-lock.json",
        "uv.lock"
      ],
      "scorecard": {
        "checks": [
          {
            "name": "Binary-Artifacts",
            "score": 10,
            "reason": "no binaries found in the repo",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#binary-artifacts"
          },
          {
            "name": "Branch-Protection",
            "score": 4,
            "reason": "branch protection is not maximal on development and all release branches",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#branch-protection"
          },
          {
            "name": "CI-Tests",
            "score": 10,
            "reason": "2 out of 2 merged PRs checked by a CI test -- score normalized to 10",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#ci-tests"
          },
          {
            "name": "CII-Best-Practices",
            "score": 0,
            "reason": "no effort to earn an OpenSSF best practices badge detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#cii-best-practices"
          },
          {
            "name": "Code-Review",
            "score": 0,
            "reason": "Found 0/2 approved changesets -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#code-review"
          },
          {
            "name": "Contributors",
            "score": 0,
            "reason": "project has 0 contributing companies or organizations -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#contributors"
          },
          {
            "name": "Dangerous-Workflow",
            "score": 10,
            "reason": "no dangerous workflow patterns detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dangerous-workflow"
          },
          {
            "name": "Dependency-Update-Tool",
            "score": 10,
            "reason": "update tool detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dependency-update-tool"
          },
          {
            "name": "Fuzzing",
            "score": 0,
            "reason": "project is not fuzzed",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#fuzzing"
          },
          {
            "name": "License",
            "score": 10,
            "reason": "license file detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#license"
          },
          {
            "name": "Maintained",
            "score": 10,
            "reason": "30 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#maintained"
          },
          {
            "name": "Packaging",
            "score": 10,
            "reason": "packaging workflow detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#packaging"
          },
          {
            "name": "Pinned-Dependencies",
            "score": 10,
            "reason": "all dependencies are pinned",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#pinned-dependencies"
          },
          {
            "name": "SAST",
            "score": 0,
            "reason": "SAST tool is not run on all commits -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#sast"
          },
          {
            "name": "Security-Policy",
            "score": 10,
            "reason": "security policy file detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#security-policy"
          },
          {
            "name": "Signed-Releases",
            "score": 0,
            "reason": "Project has not signed or included provenance with any releases.",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#signed-releases"
          },
          {
            "name": "Token-Permissions",
            "score": 0,
            "reason": "detected GitHub workflow tokens with excessive permissions",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#token-permissions"
          },
          {
            "name": "Vulnerabilities",
            "score": 8,
            "reason": "2 existing vulnerabilities detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#vulnerabilities"
          }
        ],
        "commit": "afca84d79ed54acea16abfa8ff6ce3cb98671d7b",
        "ran_at": "2026-07-15T13:03:25Z",
        "aggregate_score": 5.9,
        "scorecard_version": "v5.5.0"
      },
      "has_codeql_workflow": false,
      "has_security_policy": true,
      "has_dependabot_config": true
    }
  },
  "config": {
    "disabled_metrics": [],
    "disabled_categories": [],
    "disabled_components": {}
  },
  "source": {
    "url": "https://github.com/bijux/bijux-proteomics",
    "host": "github.com",
    "name": "bijux-proteomics",
    "owner": "bijux"
  },
  "metrics": {
    "overall": {
      "key": "overall",
      "band": "moderate",
      "name": "Overall health",
      "note": null,
      "notes": [],
      "value": 57,
      "inputs": {
        "security": 59,
        "vitality": 80,
        "community": 40,
        "governance": 26,
        "engineering": 82
      },
      "components": []
    },
    "categories": [
      {
        "key": "vitality",
        "band": "good",
        "name": "Vitality",
        "value": 80,
        "weight": 0.22,
        "metrics": [
          {
            "key": "development_activity",
            "band": "good",
            "name": "Development activity",
            "note": null,
            "notes": [],
            "value": 73,
            "inputs": {
              "commits_last_year": 6881,
              "human_commit_share": null,
              "days_since_last_push": 4,
              "active_weeks_last_year": 13
            },
            "components": [
              {
                "key": "push_recency",
                "name": "Push recency",
                "detail": "last push 4 days ago",
                "points": 36,
                "status": "met",
                "details": [
                  {
                    "code": "push_recency",
                    "params": {
                      "days": 4
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_cadence",
                "name": "Commit cadence",
                "detail": "13/52 weeks with commits",
                "points": 9,
                "status": "partial",
                "details": [
                  {
                    "code": "commit_cadence_weeks",
                    "params": {
                      "weeks": 13
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_volume",
                "name": "Commit volume",
                "detail": "6881 commits in the last year",
                "points": 18,
                "status": "met",
                "details": [
                  {
                    "code": "commits_last_year",
                    "params": {
                      "count": 6881
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "openssf_scorecard_maintained",
                "name": "OpenSSF Scorecard: Maintained",
                "detail": "30 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "release_discipline",
            "band": "excellent",
            "name": "Release discipline",
            "note": null,
            "notes": [],
            "value": 90,
            "inputs": {
              "releases_count": 5,
              "latest_release_tag": "v0.3.8",
              "releases_from_tags": false,
              "days_since_latest_release": 14,
              "mean_days_between_releases": 20.4
            },
            "components": [
              {
                "key": "ships_releases",
                "name": "Ships releases",
                "detail": "5 releases published",
                "points": 27,
                "status": "met",
                "details": [
                  {
                    "code": "releases_published",
                    "params": {
                      "count": 5
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "release_recency",
                "name": "Release recency",
                "detail": "latest release 14 days ago",
                "points": 36,
                "status": "met",
                "details": [
                  {
                    "code": "release_recency",
                    "params": {
                      "days": 14
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "release_cadence",
                "name": "Release cadence",
                "detail": "a release every ~20.4 days",
                "points": 27,
                "status": "met",
                "details": [
                  {
                    "code": "release_cadence",
                    "params": {
                      "gap": 20.4
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "openssf_scorecard_signed_releases",
                "name": "OpenSSF Scorecard: Signed-Releases",
                "detail": "Project has not signed or included provenance with any releases.",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "abandonment",
            "band": "excellent",
            "name": "Abandonment",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "cap": null,
              "state": "unverified",
              "guards": [],
              "signals": [],
              "red_flag": false,
              "multiplier_pct": 100,
              "declared_reason": null,
              "unverified_reason": "no_commit_sample",
              "unanswered_open_prs": null,
              "unanswered_open_issues": null,
              "days_since_last_merged_pr": null,
              "days_since_last_human_commit": null,
              "days_since_last_human_commit_is_floor": false
            },
            "components": [
              {
                "key": "project_is_still_maintained",
                "name": "Project is still maintained",
                "detail": "maintenance record not established from the collected data",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "abandonment_unverified",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Is the project alive — is code being written and are releases shipping?"
      },
      {
        "key": "community",
        "band": "at_risk",
        "name": "Community & Adoption",
        "value": 40,
        "weight": 0.18,
        "metrics": [
          {
            "key": "popularity",
            "band": "critical",
            "name": "Popularity & adoption",
            "note": null,
            "notes": [],
            "value": 1,
            "inputs": {
              "forks": 0,
              "stars": 2,
              "watchers": 0,
              "growth_state": "unverified",
              "growth_factor_pct": 100,
              "growth_unverified_reason": "no_history"
            },
            "components": [
              {
                "key": "stars",
                "name": "Stars",
                "detail": "2 stars",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "stars",
                    "params": {
                      "count": 2
                    }
                  }
                ],
                "max_points": 60
              },
              {
                "key": "forks",
                "name": "Forks",
                "detail": "0 forks",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "forks",
                    "params": {
                      "count": 0
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "watchers",
                "name": "Watchers",
                "detail": "0 watchers",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "watchers",
                    "params": {
                      "count": 0
                    }
                  }
                ],
                "max_points": 15
              }
            ]
          },
          {
            "key": "community_health",
            "band": "excellent",
            "name": "Community health",
            "note": null,
            "notes": [],
            "value": 85,
            "inputs": {
              "has_readme": true,
              "has_license": true,
              "has_contributing": true,
              "has_issue_template": false,
              "has_code_of_conduct": true,
              "has_pull_request_template": false
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 22.5,
                "status": "met",
                "details": [],
                "max_points": 22.5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "recognized license (Apache-2.0)",
                "points": 22.5,
                "status": "met",
                "details": [
                  {
                    "code": "license_standard",
                    "params": {}
                  },
                  {
                    "code": "license_spdx",
                    "params": {
                      "spdx": "Apache-2.0"
                    }
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributing_guide",
                "name": "CONTRIBUTING guide",
                "detail": null,
                "points": 18,
                "status": "met",
                "details": [],
                "max_points": 18
              },
              {
                "key": "code_of_conduct",
                "name": "Code of conduct",
                "detail": null,
                "points": 13.5,
                "status": "met",
                "details": [],
                "max_points": 13.5
              },
              {
                "key": "issue_template",
                "name": "Issue template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.2
              },
              {
                "key": "pr_template",
                "name": "PR template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.3
              }
            ]
          }
        ],
        "description": "Does the project have users, downloads, attention, and a welcoming setup for contributors?"
      },
      {
        "key": "governance",
        "band": "critical",
        "name": "Sustainability & Governance",
        "value": 26,
        "weight": 0.24,
        "metrics": [
          {
            "key": "maintainer_resilience",
            "band": "critical",
            "name": "Maintainer resilience (bus factor)",
            "note": null,
            "notes": [],
            "value": 13,
            "inputs": {
              "bus_factor": 1,
              "contributors_sampled": 3,
              "top_contributor_share": 0.995
            },
            "components": [
              {
                "key": "bus_factor",
                "name": "Bus factor",
                "detail": "1 contributor(s) cover half of all commits",
                "points": 9,
                "status": "partial",
                "details": [
                  {
                    "code": "bus_factor",
                    "params": {
                      "count": 1
                    }
                  }
                ],
                "max_points": 54
              },
              {
                "key": "commit_distribution",
                "name": "Commit distribution",
                "detail": "top contributor authored 100% of commits",
                "points": 0.1,
                "status": "partial",
                "details": [
                  {
                    "code": "top_contributor_share",
                    "params": {
                      "share": 100
                    }
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributor_breadth",
                "name": "Contributor breadth",
                "detail": "3 contributors",
                "points": 4.1,
                "status": "partial",
                "details": [
                  {
                    "code": "contributors_sampled",
                    "params": {
                      "count": 3
                    }
                  }
                ],
                "max_points": 13.5
              },
              {
                "key": "openssf_scorecard_contributors",
                "name": "OpenSSF Scorecard: Contributors",
                "detail": "project has 0 contributing companies or organizations -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "responsiveness",
            "band": "at_risk",
            "name": "Issue & PR responsiveness",
            "note": "Excluded from scoring (no data or not applicable): Issue resolution. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "issue_resolution"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 37,
            "inputs": {
              "merged_prs": 95,
              "open_issues": 0,
              "closed_issues": 0,
              "issue_closed_ratio": null,
              "closed_unmerged_prs": 91
            },
            "components": [
              {
                "key": "issue_resolution",
                "name": "Issue resolution",
                "detail": "no issues or no data",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_issues_or_data",
                    "params": {}
                  }
                ],
                "max_points": 46.75
              },
              {
                "key": "pr_acceptance",
                "name": "PR acceptance",
                "detail": "95/186 decided PRs merged",
                "points": 19.5,
                "status": "partial",
                "details": [
                  {
                    "code": "decided_prs_merged",
                    "params": {
                      "merged": 95,
                      "decided": 186
                    }
                  }
                ],
                "max_points": 38.25
              },
              {
                "key": "openssf_scorecard_code_review",
                "name": "OpenSSF Scorecard: Code-Review",
                "detail": "Found 0/2 approved changesets -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              }
            ]
          },
          {
            "key": "stewardship",
            "band": "at_risk",
            "name": "Ownership & stewardship",
            "note": "Excluded from scoring (no data or not applicable): Verified domain. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "verified_domain"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 32,
            "inputs": {
              "followers": 5,
              "owner_type": "User",
              "is_verified": null,
              "owner_login": "bijux",
              "public_repos": 12,
              "account_age_days": 357
            },
            "components": [
              {
                "key": "ownership_backing",
                "name": "Ownership backing",
                "detail": "personal (user) account",
                "points": 10,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_personal",
                    "params": {}
                  }
                ],
                "max_points": 30
              },
              {
                "key": "verified_domain",
                "name": "Verified domain",
                "detail": "not applicable to user accounts",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "not_applicable_to_user_accounts",
                    "params": {}
                  }
                ],
                "max_points": 20
              },
              {
                "key": "owner_reach",
                "name": "Owner reach",
                "detail": "5 followers of bijux",
                "points": 5.6,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_followers",
                    "params": {
                      "count": 5,
                      "login": "bijux"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "track_record",
                "name": "Track record",
                "detail": "12 public repos, account ~0 yr old",
                "points": 10.1,
                "status": "partial",
                "details": [
                  {
                    "code": "public_repos",
                    "params": {
                      "count": 12
                    }
                  },
                  {
                    "code": "account_age_years",
                    "params": {
                      "years": 0
                    }
                  }
                ],
                "max_points": 25
              }
            ]
          }
        ],
        "description": "Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?"
      },
      {
        "key": "engineering",
        "band": "good",
        "name": "Engineering Quality",
        "value": 82,
        "weight": 0.2,
        "metrics": [
          {
            "key": "engineering_practices",
            "band": "good",
            "name": "Engineering practices",
            "note": null,
            "notes": [],
            "value": 84,
            "inputs": {
              "has_ci": true,
              "has_tests": true,
              "has_editorconfig": false,
              "has_linter_config": true,
              "has_precommit_config": false
            },
            "components": [
              {
                "key": "ci_workflows",
                "name": "CI workflows",
                "detail": "11 workflow(s)",
                "points": 24,
                "status": "met",
                "details": [
                  {
                    "code": "ci_workflows",
                    "params": {
                      "count": 11
                    }
                  }
                ],
                "max_points": 24
              },
              {
                "key": "tests_present",
                "name": "Tests present",
                "detail": null,
                "points": 24,
                "status": "met",
                "details": [],
                "max_points": 24
              },
              {
                "key": "linter_config",
                "name": "Linter config",
                "detail": "ruff.toml, tox.ini",
                "points": 16,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "ruff.toml, tox.ini"
                    }
                  }
                ],
                "max_points": 16
              },
              {
                "key": "pre_commit_hooks",
                "name": "Pre-commit hooks",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 9.6
              },
              {
                "key": "editorconfig",
                "name": ".editorconfig",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.4
              },
              {
                "key": "openssf_scorecard_ci_tests",
                "name": "OpenSSF Scorecard: CI-Tests",
                "detail": "2 out of 2 merged PRs checked by a CI test -- score normalized to 10",
                "points": 20,
                "status": "met",
                "details": [],
                "max_points": 20
              }
            ]
          },
          {
            "key": "documentation",
            "band": "good",
            "name": "Documentation",
            "note": null,
            "notes": [],
            "value": 80,
            "inputs": {
              "topics": [],
              "has_wiki": true,
              "homepage": "http://bijux.io/bijux-proteomics/",
              "has_readme": true,
              "has_docs_dir": true,
              "has_description": false
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 30,
                "status": "met",
                "details": [],
                "max_points": 30
              },
              {
                "key": "documentation_directory",
                "name": "Documentation directory",
                "detail": null,
                "points": 25,
                "status": "met",
                "details": [],
                "max_points": 25
              },
              {
                "key": "documentation_homepage_site",
                "name": "Documentation / homepage site",
                "detail": "http://bijux.io/bijux-proteomics/",
                "points": 15,
                "status": "met",
                "details": [],
                "max_points": 15
              },
              {
                "key": "repository_description",
                "name": "Repository description",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              },
              {
                "key": "topics",
                "name": "Topics",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              },
              {
                "key": "wiki",
                "name": "Wiki",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          }
        ],
        "description": "Are baseline engineering and documentation practices in place?"
      },
      {
        "key": "security",
        "band": "moderate",
        "name": "Security",
        "value": 59,
        "weight": 0.16,
        "metrics": [
          {
            "key": "security_posture",
            "band": "moderate",
            "name": "Security posture",
            "note": null,
            "notes": [],
            "value": 59,
            "inputs": {
              "source": "openssf_scorecard",
              "checks_evaluated": 18,
              "scorecard_version": "v5.5.0",
              "checks_inconclusive": 0,
              "scorecard_aggregate": 5.9
            },
            "components": [
              {
                "key": "binary_artifacts",
                "name": "Binary-Artifacts",
                "detail": "no binaries found in the repo",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "branch_protection",
                "name": "Branch-Protection",
                "detail": "branch protection is not maximal on development and all release branches",
                "points": 3,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "ci_tests",
                "name": "CI-Tests",
                "detail": "2 out of 2 merged PRs checked by a CI test -- score normalized to 10",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "cii_best_practices",
                "name": "CII-Best-Practices",
                "detail": "no effort to earn an OpenSSF best practices badge detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "code_review",
                "name": "Code-Review",
                "detail": "Found 0/2 approved changesets -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "contributors",
                "name": "Contributors",
                "detail": "project has 0 contributing companies or organizations -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "dangerous_workflow",
                "name": "Dangerous-Workflow",
                "detail": "no dangerous workflow patterns detected",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "dependency_update_tool",
                "name": "Dependency-Update-Tool",
                "detail": "update tool detected",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "fuzzing",
                "name": "Fuzzing",
                "detail": "project is not fuzzed",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "license file detected",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "maintained",
                "name": "Maintained",
                "detail": "30 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "packaging",
                "name": "Packaging",
                "detail": "packaging workflow detected",
                "points": 5,
                "status": "met",
                "details": [],
                "max_points": 5
              },
              {
                "key": "pinned_dependencies",
                "name": "Pinned-Dependencies",
                "detail": "all dependencies are pinned",
                "points": 5,
                "status": "met",
                "details": [],
                "max_points": 5
              },
              {
                "key": "sast",
                "name": "SAST",
                "detail": "SAST tool is not run on all commits -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "security_policy",
                "name": "Security-Policy",
                "detail": "security policy file detected",
                "points": 5,
                "status": "met",
                "details": [],
                "max_points": 5
              },
              {
                "key": "signed_releases",
                "name": "Signed-Releases",
                "detail": "Project has not signed or included provenance with any releases.",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "token_permissions",
                "name": "Token-Permissions",
                "detail": "detected GitHub workflow tokens with excessive permissions",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "vulnerabilities",
                "name": "Vulnerabilities",
                "detail": "2 existing vulnerabilities detected",
                "points": 6,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              }
            ]
          }
        ],
        "description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
      },
      {
        "key": "ai_readiness",
        "band": "moderate",
        "name": "AI Readiness",
        "value": 57,
        "weight": 0,
        "metrics": [
          {
            "key": "ai_agent_context",
            "band": "critical",
            "name": "Agent context & guidance",
            "note": "Excluded from scoring (no data or not applicable): Legible commit history. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "legible_commit_history"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 1,
            "inputs": {
              "has_llms_txt": false,
              "legible_history_share": null,
              "agent_instruction_files": [],
              "agent_instruction_max_bytes": null
            },
            "components": [
              {
                "key": "agent_instructions",
                "name": "Agent instructions",
                "detail": "no CLAUDE.md / AGENTS.md / editor rules",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_instructions",
                    "params": {}
                  }
                ],
                "max_points": 45
              },
              {
                "key": "machine_readable_docs_llms_txt",
                "name": "Machine-readable docs (llms.txt)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              },
              {
                "key": "legible_commit_history",
                "name": "Legible commit history",
                "detail": "no data",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "ai_verify_loop",
            "band": "excellent",
            "name": "Verify loop (build / test / typecheck)",
            "note": "Excluded from scoring (no data or not applicable): Demonstrated agent practice. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "demonstrated_agent_practice"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 97,
            "inputs": {
              "has_nix": false,
              "has_tests": true,
              "lockfiles": [
                "package-lock.json",
                "uv.lock"
              ],
              "has_dockerfile": false,
              "typed_language": false,
              "bootstrap_files": [
                "Makefile"
              ],
              "has_devcontainer": false,
              "has_linter_config": true,
              "typecheck_configs": [
                "configs/mypy.ini",
                "packages/agentic-proteins/src/agentic_proteins/py.typed",
                "packages/bijux-proteomics-core/src/bijux_proteomics/py.typed",
                "packages/bijux-proteomics-dev/src/bijux_proteomics_dev/py.typed",
                "packages/bijux-proteomics-foundation/src/bijux_proteomics_foundation/py.typed",
                "packages/bijux-proteomics-intelligence/src/bijux_proteomics_intelligence/py.typed",
                "packages/bijux-proteomics-knowledge/src/bijux_proteomics_knowledge/py.typed",
                "packages/bijux-proteomics-lab/src/bijux_proteomics_lab/py.typed",
                "packages/bijux-proteomics-runtime/src/bijux_proteomics_runtime/py.typed",
                "packages/bijux-proteomics/src/bijux_proteomics_alias/py.typed",
                "packages/proteomics-core/src/proteomics_core/py.typed",
                "packages/proteomics-foundation/src/proteomics_foundation/py.typed",
                "packages/proteomics-intelligence/src/proteomics_intelligence/py.typed",
                "packages/proteomics-knowledge/src/proteomics_knowledge/py.typed",
                "packages/proteomics-lab/src/proteomics_lab/py.typed",
                "packages/proteomics-runtime/src/proteomics_runtime/py.typed",
                "packages/proteomics/src/proteomics/py.typed"
              ],
              "agent_commit_share": null,
              "toolchain_manifests": [],
              "dependency_bot_commit_share": 0
            },
            "components": [
              {
                "key": "one_command_bootstrap",
                "name": "One-command bootstrap",
                "detail": "Makefile",
                "points": 18,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "Makefile"
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "automated_tests",
                "name": "Automated tests",
                "detail": null,
                "points": 22,
                "status": "met",
                "details": [],
                "max_points": 22
              },
              {
                "key": "lint_format_config",
                "name": "Lint / format config",
                "detail": "ruff.toml, tox.ini",
                "points": 11,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "ruff.toml, tox.ini"
                    }
                  }
                ],
                "max_points": 11
              },
              {
                "key": "static_type_checking",
                "name": "Static type checking",
                "detail": "configs/mypy.ini, packages/agentic-proteins/src/agentic_proteins/py.typed, packages/bijux-proteomics-core/src/bijux_proteomics/py.typed, packages/bijux-proteomics-dev/src/bijux_proteomics_dev/py.typed, packages/bijux-proteomics-foundation/src/bijux_proteomics_foundation/py.typed, packages/bijux-proteomics-intelligence/src/bijux_proteomics_intelligence/py.typed, packages/bijux-proteomics-knowledge/src/bijux_proteomics_knowledge/py.typed, packages/bijux-proteomics-lab/src/bijux_proteomics_lab/py.typed, packages/bijux-proteomics-runtime/src/bijux_proteomics_runtime/py.typed, packages/bijux-proteomics/src/bijux_proteomics_alias/py.typed, packages/proteomics-core/src/proteomics_core/py.typed, packages/proteomics-foundation/src/proteomics_foundation/py.typed, packages/proteomics-intelligence/src/proteomics_intelligence/py.typed, packages/proteomics-knowledge/src/proteomics_knowledge/py.typed, packages/proteomics-lab/src/proteomics_lab/py.typed, packages/proteomics-runtime/src/proteomics_runtime/py.typed, packages/proteomics/src/proteomics/py.typed",
                "points": 11,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "configs/mypy.ini, packages/agentic-proteins/src/agentic_proteins/py.typed, packages/bijux-proteomics-core/src/bijux_proteomics/py.typed, packages/bijux-proteomics-dev/src/bijux_proteomics_dev/py.typed, packages/bijux-proteomics-foundation/src/bijux_proteomics_foundation/py.typed, packages/bijux-proteomics-intelligence/src/bijux_proteomics_intelligence/py.typed, packages/bijux-proteomics-knowledge/src/bijux_proteomics_knowledge/py.typed, packages/bijux-proteomics-lab/src/bijux_proteomics_lab/py.typed, packages/bijux-proteomics-runtime/src/bijux_proteomics_runtime/py.typed, packages/bijux-proteomics/src/bijux_proteomics_alias/py.typed, packages/proteomics-core/src/proteomics_core/py.typed, packages/proteomics-foundation/src/proteomics_foundation/py.typed, packages/proteomics-intelligence/src/proteomics_intelligence/py.typed, packages/proteomics-knowledge/src/proteomics_knowledge/py.typed, packages/proteomics-lab/src/proteomics_lab/py.typed, packages/proteomics-runtime/src/proteomics_runtime/py.typed, packages/proteomics/src/proteomics/py.typed"
                    }
                  }
                ],
                "max_points": 11
              },
              {
                "key": "reproducible_environment",
                "name": "Reproducible environment",
                "detail": "lockfile",
                "points": 10,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "lockfile"
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "demonstrated_agent_practice",
                "name": "Demonstrated agent practice",
                "detail": "no data",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              },
              {
                "key": "automated_maintenance",
                "name": "Automated maintenance",
                "detail": "dependency automation configured, none observed in the sampled commits",
                "points": 5,
                "status": "partial",
                "details": [
                  {
                    "code": "dependency_bot_config_only",
                    "params": {}
                  }
                ],
                "max_points": 8
              },
              {
                "key": "openssf_scorecard_pinned_dependencies",
                "name": "OpenSSF Scorecard: Pinned-Dependencies",
                "detail": "all dependencies are pinned",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "ai_code_legibility",
            "band": "good",
            "name": "Code legibility for models",
            "note": null,
            "notes": [],
            "value": 82,
            "inputs": {
              "primary_language": "Python",
              "largest_source_bytes": 576731,
              "source_files_sampled": 3667,
              "oversized_source_files": 12
            },
            "components": [
              {
                "key": "type_checkable_code",
                "name": "Type-checkable code",
                "detail": "Python with type-check config (configs/mypy.ini, packages/agentic-proteins/src/agentic_proteins/py.typed, packages/bijux-proteomics-core/src/bijux_proteomics/py.typed, packages/bijux-proteomics-dev/src/bijux_proteomics_dev/py.typed, packages/bijux-proteomics-foundation/src/bijux_proteomics_foundation/py.typed, packages/bijux-proteomics-intelligence/src/bijux_proteomics_intelligence/py.typed, packages/bijux-proteomics-knowledge/src/bijux_proteomics_knowledge/py.typed, packages/bijux-proteomics-lab/src/bijux_proteomics_lab/py.typed, packages/bijux-proteomics-runtime/src/bijux_proteomics_runtime/py.typed, packages/bijux-proteomics/src/bijux_proteomics_alias/py.typed, packages/proteomics-core/src/proteomics_core/py.typed, packages/proteomics-foundation/src/proteomics_foundation/py.typed, packages/proteomics-intelligence/src/proteomics_intelligence/py.typed, packages/proteomics-knowledge/src/proteomics_knowledge/py.typed, packages/proteomics-lab/src/proteomics_lab/py.typed, packages/proteomics-runtime/src/proteomics_runtime/py.typed, packages/proteomics/src/proteomics/py.typed)",
                "points": 27,
                "status": "partial",
                "details": [
                  {
                    "code": "typecheck_config_language",
                    "params": {
                      "files": "configs/mypy.ini, packages/agentic-proteins/src/agentic_proteins/py.typed, packages/bijux-proteomics-core/src/bijux_proteomics/py.typed, packages/bijux-proteomics-dev/src/bijux_proteomics_dev/py.typed, packages/bijux-proteomics-foundation/src/bijux_proteomics_foundation/py.typed, packages/bijux-proteomics-intelligence/src/bijux_proteomics_intelligence/py.typed, packages/bijux-proteomics-knowledge/src/bijux_proteomics_knowledge/py.typed, packages/bijux-proteomics-lab/src/bijux_proteomics_lab/py.typed, packages/bijux-proteomics-runtime/src/bijux_proteomics_runtime/py.typed, packages/bijux-proteomics/src/bijux_proteomics_alias/py.typed, packages/proteomics-core/src/proteomics_core/py.typed, packages/proteomics-foundation/src/proteomics_foundation/py.typed, packages/proteomics-intelligence/src/proteomics_intelligence/py.typed, packages/proteomics-knowledge/src/proteomics_knowledge/py.typed, packages/proteomics-lab/src/proteomics_lab/py.typed, packages/proteomics-runtime/src/proteomics_runtime/py.typed, packages/proteomics/src/proteomics/py.typed",
                      "language": "Python"
                    }
                  }
                ],
                "max_points": 45
              },
              {
                "key": "manageable_file_sizes",
                "name": "Manageable file sizes",
                "detail": "12/3667 source files over 60KB",
                "points": 54.8,
                "status": "partial",
                "details": [
                  {
                    "code": "oversized_source_files",
                    "params": {
                      "kb": 60,
                      "sampled": 3667,
                      "oversized": 12
                    }
                  }
                ],
                "max_points": 55
              }
            ]
          },
          {
            "key": "ai_interfaces",
            "band": "at_risk",
            "name": "Machine-readable interfaces",
            "note": null,
            "notes": [],
            "value": 40,
            "inputs": {
              "example_dirs": [
                "examples"
              ],
              "has_mcp_signal": false,
              "api_schema_files": []
            },
            "components": [
              {
                "key": "api_schema_openapi_graphql_proto",
                "name": "API schema (OpenAPI/GraphQL/proto)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 40
              },
              {
                "key": "mcp_server",
                "name": "MCP server",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              },
              {
                "key": "runnable_examples",
                "name": "Runnable examples",
                "detail": "examples",
                "points": 40,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "examples"
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          }
        ],
        "description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
      }
    ],
    "metrics_version": "1.13.0"
  },
  "warnings": [
    "Could not fetch pypi package 'bijux-proteomics-repository' from its registry"
  ],
  "report_type": "repository",
  "generated_at": "2026-07-15T13:03:42.438752Z",
  "schema_version": "0.11.0",
  "badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/b/bijux/bijux-proteomics.svg",
  "full_name": "bijux/bijux-proteomics",
  "license_state": "standard",
  "license_spdx": "Apache-2.0"
}

Bewertungen sind Signale, keine Garantien. Sie spiegeln öffentlich sichtbare Praxis auf GitHub wider — kein Code-Audit und keine Sicherheitsgarantie.

Fehlende Daten werden ausgeschlossen und die Gewichte neu normiert, nie als null bewertet. Die Methodik ist versioniert und offen: Metriken v1.13.0, Schema v0.11.0 — vollständige Methodik · Metriken-Wiki.

Wie ein einzelnes Ergebnis im Gesamtregister steht: aggregierte Statistiken.