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Software-GesundheitsberichtSchema 0.26.0 · Metriken 1.13.0 · 2026-07-21 23:48 UTC

chapmanb / bcbb

Incubator for useful bioinformatics code, primarily in Python and R

Python · HTMLKeine Lizenz erkannt★ 644 Sterne⑂ 241 Forksseit Dez. 2008Auf GitHub ansehen ↗

chapmanb/bcbb erreicht einen Gesundheitsindex von 34 von 100 und liegt damit im Bereich Gefährdet. Am stärksten schneidet es bei Sustainability & Governance (59/100) ab, am schwächsten bei Vitality (10/100). Zuletzt vor 531 Tagen aktualisiert. Ein einzelner Mitwirkender trägt den Großteil der jüngsten Arbeit.

34
gesamt / 100
Gefährdet

Software-Gesundheitsindex

Metriken werden auf einer Skala von 1–100 in gewichtete Kategorien gruppiert. Der Gesamtwert beginnt als ihr Mittel; sobald öffentliche Evidenz die Richtlinie für Hochrisikojurisdiktionen auslöst, wird die Bewertung angepasst und erhält die Obergrenze 49 (Gefährdet). AI Readiness liegt außerhalb.

34
Exzellent85-100Vorbildlich; erfüllt im Wesentlichen alle geprüften Kriterien
Gut70-84Gesund; geringfügige Lücken
Mittel50-69Akzeptabel mit deutlichen Lücken; Überprüfung empfohlen
Gefährdet30-49Erhebliche Schwächen; eine Übernahme erfordert Vorsicht
Kritisch1-29Schwerwiegende Probleme (aufgegeben, nur ein Maintainer, keine Hygiene)
VitalitätCommunity &VerbreitungNachhaltigkeit &GovernanceEngineering-QualitätSicherheitAI Readiness

Bewertungsprofil

Jede Achse ist eine Kategorie. Die Form zählt mehr als der Durchschnitt — ein gesundes Projekt füllt die gesamte Fläche, während ein Profil aus Spitzen und Kratern bedeutet, dass Stärke in einer Dimension Risiken in einer anderen verdeckt.

Abandonment Policy applies a 85% multiplier to weighted overall health.

Eigentümerschaft

Brad ChapmanPersönliches Konto
982 Follower121 öffentliche Reposseit Dez. 2008Ginkgo Bioworks

Dieses Repository gehört einem persönlichen Konto. Ein Projekt mit nur einem Eigentümer trägt ein höheres Kontinuitätsrisiko als ein organisationsgetragenes.

Paket-Ökosysteme

RegistryPaketVersionDownloads / MonatVersionenZuletzt veröffentlicht
PyPIbcbio-gff0.7.1-15vor 904 Tagen
PyPIbcbio-phyloblastverweist auf ein anderes Repo — nicht bewertet0.1.2-3vor 4891 Tagen

Metriken nach Kategorie

Vitalität

Lebt das Projekt — wird Code geschrieben und werden Releases ausgeliefert?

10Kritisch · 22 % des Gesamtindex
Wie die Bewertung erfolgt
0/36Push-Aktualität — letzter Push vor 531 Tagen
0/36Commit-Rhythmus — 0/52 Wochen mit Commits
0/18Commit-Volumen — 0 Commits im letzten Jahr
0/10OpenSSF Scorecard: Maintained — 0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
Verwendete Eingangsdaten
commits_last_year0
human_commit_share1
days_since_last_push531
active_weeks_last_year0
Wie die Bewertung erfolgt
16.2/27Liefert Releases aus — 2 Versions-Tags (keine GitHub-Releases)
0/36Release-Aktualität — letztes Release vor 1.749 Tagen
5.4/27Release-Rhythmus — ein Release etwa alle 3.164,1 Tage
0/10OpenSSF Scorecard: Signed-Releases — keine Daten
Verwendete Eingangsdaten
releases_count2
latest_release_tagv0.6.7
releases_from_tagsja
days_since_latest_release1.749
mean_days_between_releases3.164,1
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): OpenSSF Scorecard: Signed-Releases. Die verbleibenden Gewichte wurden renormalisiert.

Community & Verbreitung

Hat das Projekt Nutzer, Downloads, Aufmerksamkeit und ein einladendes Umfeld für Beitragende?

52Mittel · 18 % des Gesamtindex
Wie die Bewertung erfolgt
45.6/60Stars — 644 Stars
19.8/25Forks — 241 Forks
9.6/15Watcher — 55 Watcher
Verwendete Eingangsdaten
forks241
stars644
watchers55
growth_stateorganic
growth_factor_pct100
Wie die Bewertung erfolgt
22.5/22.5README
0/22.5Lizenz — keine Lizenzdatei erkannt
0/18CONTRIBUTING-Leitfaden
0/13.5Verhaltenskodex
0/7.2Issue-Vorlage
0/6.3PR-Vorlage
Verwendete Eingangsdaten
has_readmeja
has_licensenein
has_contributingnein
has_issue_templatenein
has_code_of_conductnein
has_pull_request_templatenein

Nachhaltigkeit & Governance

Überdauert das Projekt die Menschen, die es tragen — Bus-Faktor, Reaktionsfähigkeit, Trägerschaft und Paketpflege?

59Mittel · 24 % des Gesamtindex
Wie die Bewertung erfolgt
9/54Bus-Faktor — 1 Beitragende decken die Hälfte aller Commits ab
2.2/22.5Commit-Verteilung — wichtigste beitragende Person verfasste 90 % der Commits
13.5/13.5Breite der Beitragenden — 25 Beitragende
10/10OpenSSF Scorecard: Contributors — project has 25 contributing companies or organizations
Verwendete Eingangsdaten
bus_factor1
contributors_sampled25
top_contributor_share0,904
Wie die Bewertung erfolgt
36.2/46.8Issue-Lösungsquote — 78 % der Issues geschlossen
26.3/38.3PR-Annahme — 46/67 entschiedene PRs gemergt
6/15OpenSSF Scorecard: Code-Review — Found 9/20 approved changesets -- score normalized to 4
Verwendete Eingangsdaten
merged_prs46
open_issues18
closed_issues62
issue_closed_ratio0,775
closed_unmerged_prs21
Wie die Bewertung erfolgt
10/30Organisatorische Trägerschaft — persönliches (Nutzer-)Konto
0/20Verifizierte Domain — für Nutzerkonten nicht anwendbar
21.5/25Reichweite des Inhabers — 982 Follower von chapmanb
25/25Kontohistorie — 121 öffentliche Repos, Kontoalter ca. 17 Jahre
Verwendete Eingangsdaten
followers982
owner_typeUser
is_verified
owner_loginchapmanb
public_repos121
account_age_days6.433
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): Verifizierte Domain. Die verbleibenden Gewichte wurden renormalisiert.

Paketpflege

69Mittel
Wie die Bewertung erfolgt
25/25Veröffentlicht & auflösbar — 1 Paket(e) auf pypi
4/35Veröffentlichungsaktualität — letzte Veröffentlichung vor 904 Tagen
20/20Versionshistorie — 15 veröffentlichte Versionen
20/20Nicht veraltet — aktiv, nicht veraltet oder zurückgezogen
Verwendete Eingangsdaten
packagesbcbio-gff
ecosystemspypi
any_deprecatednein
min_days_since_publish904

Engineering-Qualität

Sind grundlegende Engineering- und Dokumentationspraktiken vorhanden?

36Gefährdet · 20 % des Gesamtindex
Wie die Bewertung erfolgt
0/24CI-Workflows
24/24Tests vorhanden
0/16Linter-Konfiguration
0/9.6Pre-Commit-Hooks
0/6.4.editorconfig
0/20OpenSSF Scorecard: CI-Tests — 0 out of 9 merged PRs checked by a CI test -- score normalized to 0
Verwendete Eingangsdaten
has_cinein
has_testsja
has_editorconfignein
has_linter_confignein
has_precommit_confignein
Wie die Bewertung erfolgt
30/30README
0/25Dokumentationsverzeichnis
15/15Dokumentations-/Homepage-Site — http://bcbio.wordpress.com
10/10Repository-Beschreibung
0/10Topics
0/10Wiki
Verwendete Eingangsdaten
topics
has_wikinein
homepagehttp://bcbio.wordpress.com
has_readmeja
has_docs_dirnein
has_descriptionja

Sicherheit

Sind die sichtbaren Sicherheits- und Lieferkettenpraktiken belastbar, ohne ungeklärte Exposition gegenüber Hochrisikojurisdiktionen?

43Gefährdet · 16 % des Gesamtindex

Sicherheitslage

29Kritisch
Wie die Bewertung erfolgt
7.5/7.5Binary-Artifacts — no binaries found in the repo
0/7.5Branch-Protection — branch protection not enabled on development/release branches
0/2.5CI-Tests — 0 out of 9 merged PRs checked by a CI test -- score normalized to 0
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
3/7.5Code-Review — Found 9/20 approved changesets -- score normalized to 4
2.5/2.5Contributors — project has 25 contributing companies or organizations
0/10Dangerous-Workflow — keine Daten
0/7.5Dependency-Update-Tool — no update tool detected
0/5Fuzzing — project is not fuzzed
0/2.5Lizenz — license file not detected
0/7.5Maintained — 0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
0/5Packaging — keine Daten
0/5Pinned-Dependencies — keine Daten
0/5SAST — SAST tool is not run on all commits -- score normalized to 0
0/5Security-Policy — security policy file not detected
0/7.5Signed-Releases — keine Daten
0/7.5Token-Permissions — keine Daten
7.5/7.5Vulnerabilities — 0 existing vulnerabilities detected
Verwendete Eingangsdaten
sourceopenssf_scorecard
checks_evaluated13
scorecard_versionv5.5.0
checks_inconclusive5
scorecard_aggregate2,9
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): dangerous_workflow, packaging, pinned_dependencies, signed_releases, token_permissions. Die verbleibenden Gewichte wurden renormalisiert.
Wie die Bewertung erfolgt
35/35Direkte Abhängigkeiten ohne bekannte Advisories — keine direkte Abhängigkeit trägt ein bekanntes Advisory
25/25Indirekte Abhängigkeiten ohne bekannte Advisories — keine indirekte Abhängigkeit trägt ein bekanntes Advisory
0/40Keine offenen Advisories — kein Advisory trägt ein Veröffentlichungsdatum
Verwendete Eingangsdaten
sourceosv
advisories0
affected_packages0
assessed_packages3
unassessed_packages0
affected_by_severitynone
direct_affected_packages0
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): Keine offenen Advisories. Die verbleibenden Gewichte wurden renormalisiert. Abgeglichen wurde die Laufzeit-Abhängigkeitshülle von pypi:bcbio-gff@0.7.1 — das, was die Installation des veröffentlichten Pakets nach sich zieht — mit 3 Paketen. Erreichbarkeit wird nicht analysiert.

AI Readiness

Wie gut ist das Repository dafür ausgestattet, mit KI-Coding-Agenten entwickelt und gepflegt zu werden? Ein unabhängiges, experimentelles Badge — Gewicht 0,0, es wird eigenständig ausgewiesen und verändert den Gesamt-Gesundheitswert nicht.

37Gefährdet · 0 % des Gesamtindex
Wie die Bewertung erfolgt
0/45Agentenanweisungen — keine CLAUDE.md / AGENTS.md / Editor-Regeln
0/15Maschinenlesbare Doku (llms.txt)
16/40Lesbare Commit-Historie — 30 von 100 menschlichen Commits benennen ihre Absicht (strukturierter Betreff oder erläuternder Text)
Verwendete Eingangsdaten
has_llms_txtnein
legible_history_share0,3
agent_instruction_files
agent_instruction_max_bytes
Wie die Bewertung erfolgt
18/18Bootstrap mit einem Befehl — abstracts/bosc_2015_bcbio_prioritization/Makefile, abstracts/bosc_2016_bcbio_cwl/Makefile, abstracts/bosc_2017_bcbio_integration/Makefile, abstracts/bosc_2018_bcbio_validation/Makefile, abstracts/hackathon_workshop_2017/Makefile, nextgen/docs/Makefile, papers/bcbio-nextgen/Makefile
22/22Automatisierte Tests
0/11Lint-/Format-Konfiguration
0/11Statische Typprüfung
0/10Reproduzierbare Umgebung
0/10Belegte Agentenpraxis — keine von Agenten verfassten Commits unter den letzten 100
0/8Automatisierte Wartung — keine automatisierten Abhängigkeits-Updates beobachtet
0/10OpenSSF Scorecard: Pinned-Dependencies — keine Daten
Verwendete Eingangsdaten
has_nixnein
has_testsja
lockfiles
has_dockerfilenein
typed_languagenein
bootstrap_filesabstracts/bosc_2015_bcbio_prioritization/Makefile, abstracts/bosc_2016_bcbio_cwl/Makefile, abstracts/bosc_2017_bcbio_integration/Makefile, abstracts/bosc_2018_bcbio_validation/Makefile, abstracts/hackathon_workshop_2017/Makefile, nextgen/docs/Makefile, papers/bcbio-nextgen/Makefile
has_devcontainernein
has_linter_confignein
typecheck_configs
agent_commit_share0
toolchain_manifests
dependency_bot_commit_share0
Von der Bewertung ausgeschlossen (keine Daten oder nicht anwendbar): OpenSSF Scorecard: Pinned-Dependencies. Die verbleibenden Gewichte wurden renormalisiert.
Wie die Bewertung erfolgt
0/45Typprüfbarer Code — Python ohne Typprüfungs-Konfiguration
54.7/55Handhabbare Dateigrößen — 1/186 Quelldateien über 60 KB
Verwendete Eingangsdaten
primary_languagePython
largest_source_bytes70.319
source_files_sampled186
oversized_source_files1
Wie die Bewertung erfolgt
0/40API-Schema (OpenAPI/GraphQL/proto)
0/20MCP-Server
40/40Lauffähige Beispiele — examples, notebooks
Verwendete Eingangsdaten
example_dirsexamples, notebooks
has_mcp_signalnein
api_schema_files

Eckdaten

644GitHub-Sterne
25Mitwirkende
0Commits, letzte 12 Monate
531Tage seit letztem Push
2Releases
1Bus-Faktor
18offene Issues
PyPIPaket-Ökosysteme

Warnungen zur Datenerhebung

  • pypi package 'bcbio-phyloblast' points at a different repository (http://bcbio.wordpress.com); excluded from ecosystem scoring

Weitere Details

Stern- und Fork-Verlauf 644 ★ / 241 ⇿
644Sterne
241Forks
2Releases

Wann jeder Stern und Fork hinzugefügt wurde, von GitHub erfasst und nach Tagen gruppiert. Das kumulierte Wachstum steht direkt über den täglichen Zugängen, aus denen es besteht, sodass beide gegeneinander lesbar sind: stetiger organischer Zuwachs sieht ganz anders aus als ein abrupter, kurzlebiger Ausschlag. Wo dieser Unterschied messbar ist, wird er als Wachstumsauthentizität ausgewiesen.

0125250375500625750643227202008-122017-092026-06
Major 0Minor 1Patch 1

Jeder Punkt umfasst 17 Tage.

OpenSSF Scorecard 2.9 / 10
2.9Gesamtwert

Unabhängige, werkzeugneutrale Sicherheitsbewertung durch das quelloffene OpenSSF Scorecard. Jede Prüfung honoriert eine Sicherheits-Praxis, nicht das Werkzeug eines bestimmten Anbieters. Prüfungen, die Scorecard nicht ermitteln konnte, sind mit k. A. markiert und vom Sicherheitswert ausgeschlossen (nie als null gezählt).Scorecard v5.5.0 · 2026-07-21 23:47 UTC

10Binary-Artifactsno binaries found in the repo
0Branch-Protectionbranch protection not enabled on development/release branches
0CI-Tests0 out of 9 merged PRs checked by a CI test -- score normalized to 0
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
4Code-ReviewFound 9/20 approved changesets -- score normalized to 4
10Contributorsproject has 25 contributing companies or organizations
k. A.Dangerous-Workflowno workflows found
0Dependency-Update-Toolno update tool detected
0Fuzzingproject is not fuzzed
0Licenselicense file not detected
0Maintained0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
k. A.Packagingpackaging workflow not detected
k. A.Pinned-Dependenciesno dependencies found
0SASTSAST tool is not run on all commits -- score normalized to 0
0Security-Policysecurity policy file not detected
k. A.Signed-Releasesno releases found
k. A.Token-PermissionsNo tokens found
10Vulnerabilities0 existing vulnerabilities detected
Alle Abhängigkeiten 3

Vollständig aufgelöster Abhängigkeitssatz aus dem GitHub-Abhängigkeitsgraphen: 0 direkte und 3 indirekte (transitive) Pakete. Die transitive Hülle ist vollständig, wenn das Repository eine Lockfile eincheckt.

RegistryPaketVersionBeziehung
PyPIbiopythonindirekt
PyPIpyyamlindirekt
PyPIsixindirekt
Abhängigkeits-Advisories 0

Die Installation von pypi:bcbio-gff@0.7.1 zieht 3 Pakete nach sich, direkt und transitiv: 0 tragen bekannte Advisories, davon 0 direkte Abhängigkeiten.

Keine bekannten Advisories betreffen die bewerteten Abhängigkeiten.

Ein Advisory bedeutet, dass die im Abhängigkeitsgraphen erfasste Version in den betroffenen Bereich eines Advisories fällt. Erreichbarkeit wird nicht analysiert, und der Graph enthält Entwicklungs- und Test-Pins — ein Fund kann das Werkzeug betreffen und nicht die ausgelieferte Software.

JSON-Rohbericht maschinenlesbar
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      "languages": {
        "R": 14547,
        "CSS": 90068,
        "TeX": 142313,
        "HTML": 248867,
        "SCSS": 16872,
        "Shell": 2356,
        "Python": 850665,
        "Clojure": 9818,
        "Makefile": 6313,
        "JavaScript": 88232,
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      "pushed_at": "2025-02-05T14:20:51Z",
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          "body": "fix: Suppress warning about invalid escape sequence",
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          "headline": "Merge pull request #147 from phaverty-ginkgo/suppress_regex_warning",
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          "headline": "Suppress warning about invalid excape sequence",
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          "headline": "Version bump: bcbio-gff-v0.7.1",
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          "oid": "03e96caa2b91cce22b6d05cf5d5f473cccbb7eb2",
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          "is_bot": false,
          "headline": "Do not smother Biopython deprecation warnings. Fixes #139",
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          "oid": "dd0dd8fa6732ff48afc38a7f05aaa32d37010761",
          "body": "updates for biopython 1.82",
          "is_bot": false,
          "headline": "Merge pull request #141 from fubar2/master",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2024-01-29T13:23:43Z",
          "body_truncated": false,
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          "oid": "0db78650b163166337328ea4613ee6a0d9ccc5fa",
          "body": "docs: Fix a few typos",
          "is_bot": false,
          "headline": "Merge pull request #135 from timgates42/bugfix_typos",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2024-01-29T13:21:47Z",
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          "oid": "eec72c3faca1e5e9e4e48dbf46d396a9045baa3b",
          "body": "fix nofuzzy_start/end deprecation - replaced with start and end\nmove all strands in seqfeatures into simplelocations\nPasses tests !",
          "is_bot": false,
          "headline": "updates for biopython 1.86",
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          "headline": "Fix error with biopython 1.81",
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                "max_points": 24
              },
              {
                "key": "linter_config",
                "name": "Linter config",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 16
              },
              {
                "key": "pre_commit_hooks",
                "name": "Pre-commit hooks",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 9.6
              },
              {
                "key": "editorconfig",
                "name": ".editorconfig",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.4
              },
              {
                "key": "openssf_scorecard_ci_tests",
                "name": "OpenSSF Scorecard: CI-Tests",
                "detail": "0 out of 9 merged PRs checked by a CI test -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              }
            ]
          },
          {
            "key": "documentation",
            "band": "moderate",
            "name": "Documentation",
            "note": null,
            "notes": [],
            "value": 55,
            "inputs": {
              "topics": [],
              "has_wiki": false,
              "homepage": "http://bcbio.wordpress.com",
              "has_readme": true,
              "has_docs_dir": false,
              "has_description": true
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 30,
                "status": "met",
                "details": [],
                "max_points": 30
              },
              {
                "key": "documentation_directory",
                "name": "Documentation directory",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 25
              },
              {
                "key": "documentation_homepage_site",
                "name": "Documentation / homepage site",
                "detail": "http://bcbio.wordpress.com",
                "points": 15,
                "status": "met",
                "details": [],
                "max_points": 15
              },
              {
                "key": "repository_description",
                "name": "Repository description",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "topics",
                "name": "Topics",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              },
              {
                "key": "wiki",
                "name": "Wiki",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          }
        ],
        "description": "Are baseline engineering and documentation practices in place?"
      },
      {
        "key": "security",
        "band": "at_risk",
        "name": "Security",
        "value": 43,
        "weight": 0.16,
        "metrics": [
          {
            "key": "security_posture",
            "band": "critical",
            "name": "Security posture",
            "note": "Excluded from scoring (no data or not applicable): Dangerous-Workflow, Packaging, Pinned-Dependencies, Signed-Releases, Token-Permissions. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "dangerous_workflow",
                    "packaging",
                    "pinned_dependencies",
                    "signed_releases",
                    "token_permissions"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 29,
            "inputs": {
              "source": "openssf_scorecard",
              "checks_evaluated": 13,
              "scorecard_version": "v5.5.0",
              "checks_inconclusive": 5,
              "scorecard_aggregate": 2.9
            },
            "components": [
              {
                "key": "binary_artifacts",
                "name": "Binary-Artifacts",
                "detail": "no binaries found in the repo",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "branch_protection",
                "name": "Branch-Protection",
                "detail": "branch protection not enabled on development/release branches",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "ci_tests",
                "name": "CI-Tests",
                "detail": "0 out of 9 merged PRs checked by a CI test -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "cii_best_practices",
                "name": "CII-Best-Practices",
                "detail": "no effort to earn an OpenSSF best practices badge detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "code_review",
                "name": "Code-Review",
                "detail": "Found 9/20 approved changesets -- score normalized to 4",
                "points": 3,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "contributors",
                "name": "Contributors",
                "detail": "project has 25 contributing companies or organizations",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "dangerous_workflow",
                "name": "Dangerous-Workflow",
                "detail": "no workflows found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              },
              {
                "key": "dependency_update_tool",
                "name": "Dependency-Update-Tool",
                "detail": "no update tool detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "fuzzing",
                "name": "Fuzzing",
                "detail": "project is not fuzzed",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "license file not detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "maintained",
                "name": "Maintained",
                "detail": "0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "packaging",
                "name": "Packaging",
                "detail": "packaging workflow not detected",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 5
              },
              {
                "key": "pinned_dependencies",
                "name": "Pinned-Dependencies",
                "detail": "no dependencies found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 5
              },
              {
                "key": "sast",
                "name": "SAST",
                "detail": "SAST tool is not run on all commits -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "security_policy",
                "name": "Security-Policy",
                "detail": "security policy file not detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "signed_releases",
                "name": "Signed-Releases",
                "detail": "no releases found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "token_permissions",
                "name": "Token-Permissions",
                "detail": "No tokens found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "vulnerabilities",
                "name": "Vulnerabilities",
                "detail": "0 existing vulnerabilities detected",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              }
            ]
          },
          {
            "key": "dependency_advisories",
            "band": "excellent",
            "name": "Dependency advisories",
            "note": "Excluded from scoring (no data or not applicable): No advisories left outstanding. Remaining weights renormalized. Matched the pypi:bcbio-gff@0.7.1 runtime dependency closure — what installing the published package pulls in — 3 packages. Reachability is not analyzed.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "no_advisories_left_outstanding"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              },
              {
                "code": "advisories_scope_published",
                "params": {
                  "package": "pypi:bcbio-gff@0.7.1",
                  "assessed": 3
                }
              },
              {
                "code": "advisories_reachability",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "source": "osv",
              "advisories": 0,
              "affected_packages": 0,
              "assessed_packages": 3,
              "unassessed_packages": 0,
              "affected_by_severity": "none",
              "direct_affected_packages": 0
            },
            "components": [
              {
                "key": "direct_dependencies_free_of_known_advisories",
                "name": "Direct dependencies free of known advisories",
                "detail": "no direct dependency carries a known advisory",
                "points": 35,
                "status": "met",
                "details": [
                  {
                    "code": "no_direct_advisories",
                    "params": {}
                  }
                ],
                "max_points": 35
              },
              {
                "key": "indirect_dependencies_free_of_known_advisories",
                "name": "Indirect dependencies free of known advisories",
                "detail": "no indirect dependency carries a known advisory",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "no_indirect_advisories",
                    "params": {}
                  }
                ],
                "max_points": 25
              },
              {
                "key": "no_advisories_left_outstanding",
                "name": "No advisories left outstanding",
                "detail": "no advisory carries a publication date",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "advisories_no_publication_date",
                    "params": {}
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "malicious_dependencies",
            "band": "excellent",
            "name": "Malicious dependencies",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "source": "osv",
              "meaning": "reported as a malicious package by the OpenSSF corpus; the remedy is removal or moving off the compromised name, never an upgrade of the same artifact. Versions the registry has since pulled are listed but not scored",
              "packages": [],
              "red_flag": false,
              "assessed_packages": 3,
              "malicious_packages": 0,
              "direct_malicious_packages": 0,
              "withdrawn_malicious_packages": 0,
              "installable_malicious_packages": 0
            },
            "components": [
              {
                "key": "no_dependency_reported_as_a_malicious_package",
                "name": "No dependency reported as a malicious package",
                "detail": "no dependency is reported as a malicious package",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "no_malicious_dependencies",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          },
          {
            "key": "high_risk_jurisdiction_exposure",
            "band": "excellent",
            "name": "High-Risk Jurisdiction Exposure",
            "note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
            "notes": [
              {
                "code": "jurisdiction_evidence_limits",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "meaning": "self-published location evidence; not nationality or citizenship",
              "red_flag": false,
              "exposures": [],
              "policy_countries": [
                "Russia",
                "Iran",
                "North Korea"
              ],
              "review_only_matches": 0,
              "assessed_self_published_locations": 19
            },
            "components": [
              {
                "key": "policy_exposure_multiplier",
                "name": "Policy exposure multiplier",
                "detail": "no confirmed policy-scope location match",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "jurisdiction_no_match",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
      },
      {
        "key": "ai_readiness",
        "band": "at_risk",
        "name": "AI Readiness",
        "value": 37,
        "weight": 0,
        "metrics": [
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            "key": "ai_agent_context",
            "band": "critical",
            "name": "Agent context & guidance",
            "note": null,
            "notes": [],
            "value": 16,
            "inputs": {
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              "legible_history_share": 0.3,
              "agent_instruction_files": [],
              "agent_instruction_max_bytes": null
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                "key": "agent_instructions",
                "name": "Agent instructions",
                "detail": "no CLAUDE.md / AGENTS.md / editor rules",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_instructions",
                    "params": {}
                  }
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                "max_points": 45
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              {
                "key": "machine_readable_docs_llms_txt",
                "name": "Machine-readable docs (llms.txt)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              },
              {
                "key": "legible_commit_history",
                "name": "Legible commit history",
                "detail": "30 of 100 human commits state their intent (structured subject or explanatory body)",
                "points": 16,
                "status": "partial",
                "details": [
                  {
                    "code": "legible_history",
                    "params": {
                      "legible": 30,
                      "sampled": 100
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                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "ai_verify_loop",
            "band": "at_risk",
            "name": "Verify loop (build / test / typecheck)",
            "note": "Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Pinned-Dependencies. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "openssf_scorecard_pinned_dependencies"
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                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 44,
            "inputs": {
              "has_nix": false,
              "has_tests": true,
              "lockfiles": [],
              "has_dockerfile": false,
              "typed_language": false,
              "bootstrap_files": [
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                "abstracts/bosc_2016_bcbio_cwl/Makefile",
                "abstracts/bosc_2017_bcbio_integration/Makefile",
                "abstracts/bosc_2018_bcbio_validation/Makefile",
                "abstracts/hackathon_workshop_2017/Makefile",
                "nextgen/docs/Makefile",
                "papers/bcbio-nextgen/Makefile"
              ],
              "has_devcontainer": false,
              "has_linter_config": false,
              "typecheck_configs": [],
              "agent_commit_share": 0,
              "toolchain_manifests": [],
              "dependency_bot_commit_share": 0
            },
            "components": [
              {
                "key": "one_command_bootstrap",
                "name": "One-command bootstrap",
                "detail": "abstracts/bosc_2015_bcbio_prioritization/Makefile, abstracts/bosc_2016_bcbio_cwl/Makefile, abstracts/bosc_2017_bcbio_integration/Makefile, abstracts/bosc_2018_bcbio_validation/Makefile, abstracts/hackathon_workshop_2017/Makefile, nextgen/docs/Makefile, papers/bcbio-nextgen/Makefile",
                "points": 18,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "abstracts/bosc_2015_bcbio_prioritization/Makefile, abstracts/bosc_2016_bcbio_cwl/Makefile, abstracts/bosc_2017_bcbio_integration/Makefile, abstracts/bosc_2018_bcbio_validation/Makefile, abstracts/hackathon_workshop_2017/Makefile, nextgen/docs/Makefile, papers/bcbio-nextgen/Makefile"
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "automated_tests",
                "name": "Automated tests",
                "detail": null,
                "points": 22,
                "status": "met",
                "details": [],
                "max_points": 22
              },
              {
                "key": "lint_format_config",
                "name": "Lint / format config",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "static_type_checking",
                "name": "Static type checking",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "reproducible_environment",
                "name": "Reproducible environment",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              },
              {
                "key": "demonstrated_agent_practice",
                "name": "Demonstrated agent practice",
                "detail": "no agent-authored commits among the last 100",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_authored_commits",
                    "params": {
                      "sampled": 100
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "automated_maintenance",
                "name": "Automated maintenance",
                "detail": "no automated dependency updates observed",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_dependency_automation",
                    "params": {}
                  }
                ],
                "max_points": 8
              },
              {
                "key": "openssf_scorecard_pinned_dependencies",
                "name": "OpenSSF Scorecard: Pinned-Dependencies",
                "detail": "no dependencies found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              }
            ]
          },
          {
            "key": "ai_code_legibility",
            "band": "moderate",
            "name": "Code legibility for models",
            "note": null,
            "notes": [],
            "value": 55,
            "inputs": {
              "primary_language": "Python",
              "largest_source_bytes": 70319,
              "source_files_sampled": 186,
              "oversized_source_files": 1
            },
            "components": [
              {
                "key": "type_checkable_code",
                "name": "Type-checkable code",
                "detail": "Python without a type-check config",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_typecheck_config_language",
                    "params": {
                      "language": "Python"
                    }
                  }
                ],
                "max_points": 45
              },
              {
                "key": "manageable_file_sizes",
                "name": "Manageable file sizes",
                "detail": "1/186 source files over 60KB",
                "points": 54.7,
                "status": "partial",
                "details": [
                  {
                    "code": "oversized_source_files",
                    "params": {
                      "kb": 60,
                      "sampled": 186,
                      "oversized": 1
                    }
                  }
                ],
                "max_points": 55
              }
            ]
          },
          {
            "key": "ai_interfaces",
            "band": "at_risk",
            "name": "Machine-readable interfaces",
            "note": null,
            "notes": [],
            "value": 40,
            "inputs": {
              "example_dirs": [
                "examples",
                "notebooks"
              ],
              "has_mcp_signal": false,
              "api_schema_files": []
            },
            "components": [
              {
                "key": "api_schema_openapi_graphql_proto",
                "name": "API schema (OpenAPI/GraphQL/proto)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 40
              },
              {
                "key": "mcp_server",
                "name": "MCP server",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              },
              {
                "key": "runnable_examples",
                "name": "Runnable examples",
                "detail": "examples, notebooks",
                "points": 40,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "examples, notebooks"
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          }
        ],
        "description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
      }
    ],
    "metrics_version": "1.13.0"
  },
  "warnings": [
    "pypi package 'bcbio-phyloblast' points at a different repository (http://bcbio.wordpress.com); excluded from ecosystem scoring"
  ],
  "report_type": "repository",
  "generated_at": "2026-07-21T23:48:23.672955Z",
  "schema_version": "0.26.0",
  "badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/c/chapmanb/bcbb.svg",
  "full_name": "chapmanb/bcbb",
  "license_state": "absent",
  "license_spdx": null
}

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