Публічний реєстр
Звіт про здоров'я програмного забезпеченнясхема 0.26.0 · метрики 1.13.0 · 2026-07-21 23:48 UTC

chapmanb / bcbb

Incubator for useful bioinformatics code, primarily in Python and R

Python · HTMLЛіцензію не виявлено★ 644 зірки⑂ 241 форкз груд. 2008 р.Переглянути на GitHub ↗

chapmanb/bcbb має індекс здоров’я 34 зі 100, що відповідає смузі «У зоні ризику». Найвищий показник — Sustainability & Governance (59/100), найнижчий — Vitality (10/100). Останнє оновлення було 531 день тому. Більшість нещодавньої роботи виконує один учасник.

34
загалом / 100
У зоні ризику

Індекс здоров'я програмного забезпечення

Метрики згруповано у зважені категорії на шкалі 1–100. Загальна оцінка починається як їхнє середнє; коли публічні дані активують Політику юрисдикцій високого ризику, рейтинг коригується й отримує верхню межу 49 («Під ризиком»). Готовність до ШІ не входить до індексу.

34
Відмінний85-100Зразковий; відповідає практично всім перевіреним критеріям
Добрий70-84Здоровий; незначні прогалини
Помірний50-69Прийнятний, але з помітними прогалинами; рекомендовано перевірку
У зоні ризику30-49Суттєві слабкі місця; впровадження потребує обережності
Критичний1-29Серйозні проблеми (покинутий, єдиний мейнтейнер, без базової гігієни)
ЖиттєздатністьСпільнота тавпровадженняСталість таврядуванняІнженернаякістьБезпекаГотовність доШІ

Профіль оцінок

Кожна вісь — окрема категорія. Форма важить більше, ніж середнє: здоровий об'єкт заповнює всю фігуру, тоді як профіль із піками та провалами означає, що сила в одному вимірі маскує ризик в іншому.

Abandonment Policy applies a 85% multiplier to weighted overall health.

Власність

Brad ChapmanОсобистий обліковий запис
982 підписники121 публічний репозиторійз груд. 2008 р.Ginkgo Bioworks

Цей репозиторій належить особистому обліковому запису. Проєкт з єдиним власником несе більший ризик безперервності, ніж підтримуваний організацією.

Пакетні екосистеми

РеєстрПакетВерсіяЗавантажень / місВерсіїОстання публікація
PyPIbcbio-gff0.7.1-15904 дні тому
PyPIbcbio-phyloblastвказує на інший репозиторій — не оцінюється0.1.2-34891 день тому

Метрики за категоріями

Життєздатність

Чи живий проєкт — чи пишеться код і чи виходять релізи?

10Критичний · 22% загального індексу
Як обчислюється оцінка
0/36Свіжість push — останній push 531 дн. тому
0/36Ритм комітів — 0/52 тижнів із комітами
0/18Обсяг комітів — 0 комітів за останній рік
0/10OpenSSF Scorecard: Maintained — 0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
Використані вхідні дані
commits_last_year0
human_commit_share1
days_since_last_push531
active_weeks_last_year0
Як обчислюється оцінка
16.2/27Випускає релізи — 2 тегів версій (без релізів GitHub)
0/36Свіжість релізів — останній реліз 1 749 дн. тому
5.4/27Ритм релізів — реліз кожні ~3 164,1 дн.
0/10OpenSSF Scorecard: Signed-Releases — немає даних
Використані вхідні дані
releases_count2
latest_release_tagv0.6.7
releases_from_tagsтак
days_since_latest_release1 749
mean_days_between_releases3 164,1
Виключено з оцінювання (немає даних або не застосовно): OpenSSF Scorecard: Signed-Releases. Залишкові ваги перенормовано.

Спільнота та впровадження

Чи має проєкт користувачів, завантаження, увагу та влаштовані умови для контриб’юторів?

52Помірний · 18% загального індексу
Як обчислюється оцінка
45.6/60Зірки — 644 зірок
19.8/25Форки — 241 форків
9.6/15Спостерігачі — 55 спостерігачів
Використані вхідні дані
forks241
stars644
watchers55
growth_stateorganic
growth_factor_pct100
Як обчислюється оцінка
22.5/22.5README
0/22.5Ліцензія — файлу ліцензії не виявлено
0/18Настанови CONTRIBUTING
0/13.5Кодекс поведінки
0/7.2Шаблон issue
0/6.3Шаблон PR
Використані вхідні дані
has_readmeтак
has_licenseні
has_contributingні
has_issue_templateні
has_code_of_conductні
has_pull_request_templateні

Сталість та врядування

Чи переживе проєкт своїх людей — бас-фактор, реактивність, хто за ним стоїть і як супроводжуються пакети?

59Помірний · 24% загального індексу
Як обчислюється оцінка
9/54Бас-фактор — на 1 контриб’ютор(ів) припадає половина всіх комітів
2.2/22.5Розподіл комітів — головний контриб’ютор — автор 90% комітів
13.5/13.5Широта контриб’юторів — 25 контриб’юторів
10/10OpenSSF Scorecard: Contributors — project has 25 contributing companies or organizations
Використані вхідні дані
bus_factor1
contributors_sampled25
top_contributor_share0,904
Як обчислюється оцінка
36.2/46.8Вирішення issue — закрито 78% issue
26.3/38.3Прийняття PR — злито 46/67 вирішених PR
6/15OpenSSF Scorecard: Code-Review — Found 9/20 approved changesets -- score normalized to 4
Використані вхідні дані
merged_prs46
open_issues18
closed_issues62
issue_closed_ratio0,775
closed_unmerged_prs21
Як обчислюється оцінка
10/30Підтримка власника — особистий (користувацький) обліковий запис
0/20Верифікований домен — не застосовно до користувацьких облікових записів
21.5/25Охоплення власника — 982 підписників у chapmanb
25/25Послужний список — 121 публічних репозиторіїв, вік облікового запису ~17 р.
Використані вхідні дані
followers982
owner_typeUser
is_verified
owner_loginchapmanb
public_repos121
account_age_days6 433
Виключено з оцінювання (немає даних або не застосовно): Верифікований домен. Залишкові ваги перенормовано.
Як обчислюється оцінка
25/25Опубліковано й доступно — 1 пакет(ів) у pypi
4/35Свіжість публікацій — остання публікація 904 дн. тому
20/20Історія версій — 15 опублікованих версій
20/20Не застарілий — активний, не deprecated і не yanked
Використані вхідні дані
packagesbcbio-gff
ecosystemspypi
any_deprecatedні
min_days_since_publish904

Інженерна якість

Чи наявні базові інженерні практики та документація?

36У зоні ризику · 20% загального індексу
Як обчислюється оцінка
0/24Процеси CI
24/24Наявні тести
0/16Конфігурація лінтера
0/9.6Pre-commit-хуки
0/6.4.editorconfig
0/20OpenSSF Scorecard: CI-Tests — 0 out of 9 merged PRs checked by a CI test -- score normalized to 0
Використані вхідні дані
has_ciні
has_testsтак
has_editorconfigні
has_linter_configні
has_precommit_configні

Документація

55Помірний
Як обчислюється оцінка
30/30README
0/25Каталог документації
15/15Сайт документації / домашня сторінка — http://bcbio.wordpress.com
10/10Опис репозиторію
0/10Теми
0/10Wiki
Використані вхідні дані
topics
has_wikiні
homepagehttp://bcbio.wordpress.com
has_readmeтак
has_docs_dirні
has_descriptionтак

Безпека

Чи міцні видимі практики безпеки й ланцюга постачання, без непослабленої пов’язаності з юрисдикціями високого ризику?

43У зоні ризику · 16% загального індексу

Стан безпеки

29Критичний
Як обчислюється оцінка
7.5/7.5Binary-Artifacts — no binaries found in the repo
0/7.5Branch-Protection — branch protection not enabled on development/release branches
0/2.5CI-Tests — 0 out of 9 merged PRs checked by a CI test -- score normalized to 0
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
3/7.5Code-Review — Found 9/20 approved changesets -- score normalized to 4
2.5/2.5Contributors — project has 25 contributing companies or organizations
0/10Dangerous-Workflow — немає даних
0/7.5Dependency-Update-Tool — no update tool detected
0/5Fuzzing — project is not fuzzed
0/2.5Ліцензія — license file not detected
0/7.5Maintained — 0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
0/5Packaging — немає даних
0/5Pinned-Dependencies — немає даних
0/5SAST — SAST tool is not run on all commits -- score normalized to 0
0/5Security-Policy — security policy file not detected
0/7.5Signed-Releases — немає даних
0/7.5Token-Permissions — немає даних
7.5/7.5Vulnerabilities — 0 existing vulnerabilities detected
Використані вхідні дані
sourceopenssf_scorecard
checks_evaluated13
scorecard_versionv5.5.0
checks_inconclusive5
scorecard_aggregate2,9
Виключено з оцінювання (немає даних або не застосовно): dangerous_workflow, packaging, pinned_dependencies, signed_releases, token_permissions. Залишкові ваги перенормовано.
Як обчислюється оцінка
35/35Прямі залежності без відомих сповіщень — жодна пряма залежність не має відомих сповіщень
25/25Непрямі залежності без відомих сповіщень — жодна непряма залежність не має відомих сповіщень
0/40Немає задавнених сповіщень — жодне сповіщення не має дати публікації
Використані вхідні дані
sourceosv
advisories0
affected_packages0
assessed_packages3
unassessed_packages0
affected_by_severitynone
direct_affected_packages0
Виключено з оцінювання (немає даних або не застосовно): Немає задавнених сповіщень. Залишкові ваги перенормовано. Звірено з runtime-замиканням залежностей pypi:bcbio-gff@0.7.1 — тим, що тягне за собою встановлення опублікованого пакета, — 3 пакетів. Досяжність не аналізується.

Готовність до ШІ

Наскільки репозиторій оснащений для розробки та супроводу за участі ШІ-агентів? Незалежний, експериментальний бейдж — вага 0.0, тож він подається окремо і не впливає на загальний індекс здоров'я.

37У зоні ризику · 0% загального індексу
Як обчислюється оцінка
0/45Інструкції для агентів — немає CLAUDE.md / AGENTS.md / правил редактора
0/15Машиночитана документація (llms.txt)
16/40Читабельна історія комітів — намір зазначено у 30 з 100 людських комітів (структурований заголовок або пояснювальний текст)
Використані вхідні дані
has_llms_txtні
legible_history_share0,3
agent_instruction_files
agent_instruction_max_bytes
Як обчислюється оцінка
18/18Розгортання однією командою — abstracts/bosc_2015_bcbio_prioritization/Makefile, abstracts/bosc_2016_bcbio_cwl/Makefile, abstracts/bosc_2017_bcbio_integration/Makefile, abstracts/bosc_2018_bcbio_validation/Makefile, abstracts/hackathon_workshop_2017/Makefile, nextgen/docs/Makefile, papers/bcbio-nextgen/Makefile
22/22Автоматизовані тести
0/11Конфігурація лінтера / форматера
0/11Статична перевірка типів
0/10Відтворюване середовище
0/10Підтверджена практика роботи з агентами — серед останніх 100 комітів немає створених агентом
0/8Автоматизоване супроводження — автоматичних оновлень залежностей не виявлено
0/10OpenSSF Scorecard: Pinned-Dependencies — немає даних
Використані вхідні дані
has_nixні
has_testsтак
lockfiles
has_dockerfileні
typed_languageні
bootstrap_filesabstracts/bosc_2015_bcbio_prioritization/Makefile, abstracts/bosc_2016_bcbio_cwl/Makefile, abstracts/bosc_2017_bcbio_integration/Makefile, abstracts/bosc_2018_bcbio_validation/Makefile, abstracts/hackathon_workshop_2017/Makefile, nextgen/docs/Makefile, papers/bcbio-nextgen/Makefile
has_devcontainerні
has_linter_configні
typecheck_configs
agent_commit_share0
toolchain_manifests
dependency_bot_commit_share0
Виключено з оцінювання (немає даних або не застосовно): OpenSSF Scorecard: Pinned-Dependencies. Залишкові ваги перенормовано.
Як обчислюється оцінка
0/45Типізований код — Python без конфігурації перевірки типів
54.7/55Керовані розміри файлів — 1/186 файлів вихідного коду понад 60 КБ
Використані вхідні дані
primary_languagePython
largest_source_bytes70 319
source_files_sampled186
oversized_source_files1
Як обчислюється оцінка
0/40Схема API (OpenAPI/GraphQL/proto)
0/20Сервер MCP
40/40Придатні до запуску приклади — examples, notebooks
Використані вхідні дані
example_dirsexamples, notebooks
has_mcp_signalні
api_schema_files

Ключові факти

644зірок GitHub
25контриб'юторів
0комітів за останні 12 місяців
531днів від останнього пушу
2релізів
1бас-фактор
18відкритих issue
PyPIпакетних екосистем

Попередження щодо збору даних

  • pypi package 'bcbio-phyloblast' points at a different repository (http://bcbio.wordpress.com); excluded from ecosystem scoring

Докладніше

Історія зірок і форків 644 ★ / 241 ⇿
644Зірки
241Форки
2Релізи

Коли додано кожну зірку й форк — зібрано з GitHub і згруповано за днями. Кумулятивне зростання розміщено просто над денними додаваннями, з яких воно складається, тож їх видно одне проти одного: рівномірне органічне накопичення виглядає зовсім інакше, ніж різкий короткочасний сплеск. Там, де цю різницю можна виміряти, її подано як автентичність росту.

0125250375500625750643227202008-122017-092026-06
Мажорні 0Мінорні 1Патчі 1

Кожна точка охоплює 17 днів.

OpenSSF Scorecard 2.9 / 10
2.9сукупно

Незалежна, не прив'язана до інструментів оцінка безпеки від відкритого проєкту OpenSSF Scorecard. Кожна перевірка винагороджує практику безпеки, а не інструмент конкретного постачальника. Перевірки, які Scorecard не зміг визначити, позначено н/д і виключено з оцінки безпеки (вони ніколи не зараховуються як нуль).Scorecard v5.5.0 · 2026-07-21 23:47 UTC

10Binary-Artifactsno binaries found in the repo
0Branch-Protectionbranch protection not enabled on development/release branches
0CI-Tests0 out of 9 merged PRs checked by a CI test -- score normalized to 0
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
4Code-ReviewFound 9/20 approved changesets -- score normalized to 4
10Contributorsproject has 25 contributing companies or organizations
н/дDangerous-Workflowno workflows found
0Dependency-Update-Toolno update tool detected
0Fuzzingproject is not fuzzed
0Licenselicense file not detected
0Maintained0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
н/дPackagingpackaging workflow not detected
н/дPinned-Dependenciesno dependencies found
0SASTSAST tool is not run on all commits -- score normalized to 0
0Security-Policysecurity policy file not detected
н/дSigned-Releasesno releases found
н/дToken-PermissionsNo tokens found
10Vulnerabilities0 existing vulnerabilities detected
Усі залежності 3

Повний розв'язаний набір залежностей із графа залежностей GitHub: 0 прямих і 3 непрямих (транзитивних) пакетів. Транзитивне замикання є повним, коли в репозиторії закомічено lockfile.

РеєстрПакетВерсіяЗв'язок
PyPIbiopythonнепряма
PyPIpyyamlнепряма
PyPIsixнепряма
Сповіщення про залежності 0

Встановлення pypi:bcbio-gff@0.7.1 тягне 3 пакетів, прямих і транзитивних: 0 мають відомі сповіщення, з них 0 — прямі залежності.

Жодне відоме сповіщення не стосується оцінених залежностей.

Сповіщення означає, що версія, записана в графі залежностей, потрапляє в уражений діапазон. Досяжність не аналізується, а граф містить піниї розробки й тестування — знахідка може стосуватися інструментів, а не поставленого коду.

Звіт у форматі JSON машиночитний
{
  "data": {
    "repo": {
      "topics": [],
      "is_fork": false,
      "size_kb": 83224,
      "has_wiki": false,
      "homepage": "http://bcbio.wordpress.com",
      "languages": {
        "R": 14547,
        "CSS": 90068,
        "TeX": 142313,
        "HTML": 248867,
        "SCSS": 16872,
        "Shell": 2356,
        "Python": 850665,
        "Clojure": 9818,
        "Makefile": 6313,
        "JavaScript": 88232,
        "Jupyter Notebook": 5429
      },
      "pushed_at": "2025-02-05T14:20:51Z",
      "created_at": "2008-12-09T21:05:22Z",
      "owner_type": "User",
      "updated_at": "2026-07-09T17:16:49Z",
      "description": "Incubator for useful bioinformatics code, primarily in Python and R",
      "is_archived": false,
      "is_disabled": false,
      "license_spdx": null,
      "default_branch": "master",
      "license_spdx_raw": null,
      "primary_language": "Python",
      "significant_languages": [
        "Python",
        "HTML"
      ]
    },
    "owner": {
      "blog": "http://bcb.io",
      "name": "Brad Chapman",
      "type": "User",
      "login": "chapmanb",
      "company": "Ginkgo Bioworks",
      "location": "Boston, MA",
      "followers": 982,
      "avatar_url": "https://avatars.githubusercontent.com/u/39391?v=4",
      "created_at": "2008-12-09T18:45:45Z",
      "is_verified": null,
      "public_repos": 121,
      "account_age_days": 6433
    },
    "license": {
      "state": "absent",
      "spdx_id": null,
      "raw_spdx": null,
      "file_present": false,
      "scorecard_found": false,
      "profile_has_license": false
    },
    "activity": {
      "releases": [
        {
          "tag": "v0.6.7",
          "kind": "patch",
          "published_at": "2021-10-06T13:26:49Z"
        },
        {
          "tag": "v0.6.0",
          "kind": "minor",
          "published_at": "2013-02-06T10:19:08Z"
        }
      ],
      "recent_commits": [
        {
          "oid": "320353c64ee0dc938113ca36f19b2e6de6b597be",
          "body": "fix: Suppress warning about invalid escape sequence",
          "is_bot": false,
          "headline": "Merge pull request #147 from phaverty-ginkgo/suppress_regex_warning",
          "author_name": "Rory Kirchner",
          "author_login": "roryk",
          "committed_at": "2025-02-05T14:20:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6fca8aa5aabbd7e3d5ff63f3d9f2afc73e9584b7",
          "body": null,
          "is_bot": false,
          "headline": "Suppress warning about invalid excape sequence",
          "author_name": "Peter Haverty",
          "author_login": "phaverty-ginkgo",
          "committed_at": "2025-02-04T23:41:08Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9c6d83ee3f0491f647a9ecd5947b13c99b478f26",
          "body": null,
          "is_bot": false,
          "headline": "Version bump: bcbio-gff-v0.7.1",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2024-01-29T13:59:34Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "03e96caa2b91cce22b6d05cf5d5f473cccbb7eb2",
          "body": null,
          "is_bot": false,
          "headline": "Do not smother Biopython deprecation warnings. Fixes #139",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2024-01-29T13:45:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dd0dd8fa6732ff48afc38a7f05aaa32d37010761",
          "body": "updates for biopython 1.82",
          "is_bot": false,
          "headline": "Merge pull request #141 from fubar2/master",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2024-01-29T13:23:43Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "0db78650b163166337328ea4613ee6a0d9ccc5fa",
          "body": "docs: Fix a few typos",
          "is_bot": false,
          "headline": "Merge pull request #135 from timgates42/bugfix_typos",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2024-01-29T13:21:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "eec72c3faca1e5e9e4e48dbf46d396a9045baa3b",
          "body": "fix nofuzzy_start/end deprecation - replaced with start and end\nmove all strands in seqfeatures into simplelocations\nPasses tests !",
          "is_bot": false,
          "headline": "updates for biopython 1.86",
          "author_name": "fubar2",
          "author_login": "fubar2",
          "committed_at": "2024-01-02T23:12:18Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "81442c07173aaa59cbc1be33dd4a6e0eee87c5f6",
          "body": "Fix error with biopython 1.81",
          "is_bot": false,
          "headline": "Merge pull request #137 from abretaud/unknownseq",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2023-03-13T12:55:20Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8a36af0c1af2c2b39e841cea2496f7a367ffdae5",
          "body": null,
          "is_bot": false,
          "headline": "Fix error with biopython 1.81",
          "author_name": "Anthony Bretaudeau",
          "author_login": "abretaud",
          "committed_at": "2023-02-15T15:53:12Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "63224f4b106c49dcfa25cf73406dcaa047a77758",
          "body": "There are small typos in:\n- posts/conferences/bosc2018_day1a.md\n- posts/seminars/tumor_heterogeneity_carter.md\n\nFixes:\n- Should read `suppressors` rather than `supressors`.\n- Should read `service` rather than `serivce`.\n\nSigned-off-by: Tim Gates <tim.gates@iress.com>",
          "is_bot": false,
          "headline": "docs: Fix a few typos",
          "author_name": "Tim Gates",
          "author_login": "timgates42",
          "committed_at": "2022-07-19T10:58:38Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dbfb52711f0bfcc1d26c5a5b53c9ff4f50dc0027",
          "body": null,
          "is_bot": false,
          "headline": "v0.6.9: fix ID matching when no rec.id fixes #134",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2021-11-18T15:07:37Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "438f4242063b29f507282bc507ca67fddcfa64ed",
          "body": "NCBI PGAP can produce fastas with NCBI headers (`lcl|1`) and GFFs\nwith plain IDs (`1`). This avoids creating duplicate records by\nmatching these and using a consistent contig ID when combining sequences\nand GFF files.\n\nThe contig ID used in the final output SeqRecords is the first one\nencountered. So if you use an external FASTA it's the IDs in the FASTA\nand if you use a GFF embedded FASTA it's the IDs in the GFF.",
          "is_bot": false,
          "headline": "v0.6.8: match records between fasta and GFF with NCBI style headers",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2021-11-03T09:19:56Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "599c64c5d5f5a53ec35c6c3f3619614fa92e3a3c",
          "body": null,
          "is_bot": false,
          "headline": "v0.6.7: handle problem sequence-region directives without contigs",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2021-10-06T13:26:49Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d3c51a22ac961584cca1689c7261b1c8ebe1830a",
          "body": null,
          "is_bot": false,
          "headline": "GFF to Genbank: support latest biopython without alphabets",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2021-10-06T13:15:56Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "74502a06d56afa9e1d60bffcb21725f078d8d83f",
          "body": "Support zero length reads in FakeHandle",
          "is_bot": false,
          "headline": "Merge pull request #133 from peterjc/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2021-06-08T09:17:29Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f980be9bcdddfae96c605694e90465bc6f428c5d",
          "body": "Biopython now uses this to detect file mode (text/unicode versus binary/bytes).\r\n\r\nhttps://github.com/biopython/biopython/issues/3575",
          "is_bot": false,
          "headline": "Support zero length reads in FakeHandle",
          "author_name": "Peter Cock",
          "author_login": "peterjc",
          "committed_at": "2021-06-03T16:46:24Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "3ba0ec42120065cca136fd496948948f57081039",
          "body": "Add license to setup.py",
          "is_bot": false,
          "headline": "Merge pull request #129 from sergiuser1/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2020-02-12T10:58:57Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e3300a54697f0e54dc30c0b478aa88a73507be48",
          "body": null,
          "is_bot": false,
          "headline": "Add license to setup.py",
          "author_name": "Sergiu",
          "author_login": "sergiuser1",
          "committed_at": "2020-02-10T14:36:16Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4bb602b281497d691edfab6b077b2c8eff8555e9",
          "body": " py3: raise TypeError on binary file handle",
          "is_bot": false,
          "headline": "Merge pull request #127 from tipabu/py3-binary-mode",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2019-07-09T09:07:28Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "33869f3933d23e0c0b7655cec4aa474f48f9b302",
          "body": "Previously you would get errors like\n\n    TypeError: instance has no next() method",
          "is_bot": false,
          "headline": "Fix tests on py2",
          "author_name": "Tim Burke",
          "author_login": "tipabu",
          "committed_at": "2019-07-08T18:29:23Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "76f9c1179085674070f4af4c12ed1cea421aec6d",
          "body": "Closes #125",
          "is_bot": false,
          "headline": "py3: raise TypeError on binary file handle",
          "author_name": "Tim Burke",
          "author_login": "tipabu",
          "committed_at": "2019-07-08T18:27:30Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6ecbdc86390c9dfa25cd738cd92c4c45a543b392",
          "body": "…line\n\nfix crashes when parsing gtf files which contain gene lines",
          "is_bot": false,
          "headline": "Merge pull request #126 from DavyCats/dc_gffparser_fix_crash_on_gene_…",
          "author_name": "Rory Kirchner",
          "author_login": "roryk",
          "committed_at": "2019-06-19T13:39:27Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a4c26381c7535bcec5ed284943cbef143a62948a",
          "body": null,
          "is_bot": false,
          "headline": "fix crashes when parsing gtf files which contain gene lines",
          "author_name": "DavyCats",
          "author_login": "DavyCats",
          "committed_at": "2019-06-19T11:36:14Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "45b95cb71ac76410708cbe9a8a50972d6912aee9",
          "body": null,
          "is_bot": false,
          "headline": "Ginkgo data talk: finalize and improve after practice",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-28T13:47:18Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "bad8ad72da8862636da16a1380868184d57e54d6",
          "body": "Add biopython dependency to bcbio gff",
          "is_bot": false,
          "headline": "Merge pull request #124 from rhpvorderman/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2019-03-28T09:57:44Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "eb9c3cfbb388bed7fe51e43e036a928d85b2ddd1",
          "body": null,
          "is_bot": false,
          "headline": "Ginkgo data work in progress for BIG meeting",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-27T19:06:45Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d59d17bc1c539b585586d99a2be44336ccba528e",
          "body": "The package depends on biopython.",
          "is_bot": false,
          "headline": "Add biopython dependency",
          "author_name": "Ruben Vorderman",
          "author_login": "rhpvorderman",
          "committed_at": "2019-03-27T11:53:02Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "15c1d5e240b57ecd907e0f25a7f29afc040ecc42",
          "body": null,
          "is_bot": false,
          "headline": "v0.6.6: fix for LICENSE file install bioconda/bioconda-recipes#13873",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-17T08:50:58Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "90f3bb79c14a8bb4f1b909da233726401c4ed6e6",
          "body": "chapmanb/bcbb#123",
          "is_bot": false,
          "headline": "Glimmer: ensure have Bio.Seq for reverse complement",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-14T13:08:11Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "112732cec1ec8e58a2a4be4bbff20535bb1391c9",
          "body": null,
          "is_bot": false,
          "headline": "Python 3 compatibility: reduce #123",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-12T10:01:15Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6eff6585d4336b62c4f6d516bb41d871cd4774d0",
          "body": null,
          "is_bot": false,
          "headline": "Avoid reduce errors with missing exon sequence. Fixes #123",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-10T09:09:13Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "91eea6bab7ef5fdbc541cf9d5ac0587f97386180",
          "body": "Add LICENSE file to bcbio-gff Manifest.in",
          "is_bot": false,
          "headline": "Merge pull request #122 from dfornika/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2019-03-05T11:23:20Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7ef85bdcffa75bb52c83c0ccf0df997a484d2f57",
          "body": null,
          "is_bot": false,
          "headline": "Add LICENSE file to Manifest.in",
          "author_name": "Dan Fornika",
          "author_login": "dfornika",
          "committed_at": "2019-03-03T21:28:31Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "2615a4117c19c4d8c196e6baf6cc46d05fb209de",
          "body": null,
          "is_bot": false,
          "headline": "Recommendations for variant calling and bcbio CWL runs",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-01T10:17:39Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9b72800127267c8b68a4c08471e00d776b26ed21",
          "body": null,
          "is_bot": false,
          "headline": "Bcbio GFF v0.6.5: Python 3 compatibility; fixes #120",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-02-11T11:16:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9e420bd40a69e73da3fc2b3a9b4ab6a40c157413",
          "body": null,
          "is_bot": false,
          "headline": "Notes from BIG community meetings",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-01-10T19:21:38Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "2be0ccfb3b8ca35501539d5cfc2c782bb3139c20",
          "body": null,
          "is_bot": false,
          "headline": "talks: teaching slides for NGS long course at Harvard Chan",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-10-10T09:35:55Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "841c199b3904e2ccb8a07c440cd01c5b32ad96d3",
          "body": null,
          "is_bot": false,
          "headline": "Add license for code and docs. Fixes #119",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-09-11T13:51:17Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7d94258aa8d9ea5660018c4dbdc0142f07fbc76c",
          "body": null,
          "is_bot": false,
          "headline": "Finalize PGP getting started talk",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-07-21T09:31:43Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "683b6828c52acb8a9352bfda828a315a69581b74",
          "body": "…back from team",
          "is_bot": false,
          "headline": "PGP Hackathon 1.0 example projects: update and organize based on feed…",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-07-18T16:00:48Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "2bc761a6572e35950bec68172c1c4fdc1af87e1d",
          "body": null,
          "is_bot": false,
          "headline": "BOSC/GCC notes: add links between writeups",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-29T20:20:29Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a025127937ad2f0388b194a9170bbbf58f22bd21",
          "body": "Mention parallel sessions; link to part 2",
          "is_bot": false,
          "headline": "Merge pull request #117 from nlharris/patch-2",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2018-06-29T20:11:58Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9160455752eaa5f81c1ade7110b6fd445b9aa3cf",
          "body": "Thanks for putting together this great summary, Brad!\r\nI thought it would be helpful to include a link to part 2 of your summary, and to mention that there were parallel GCC/BOSC sessions and you are reporting only on the BOSC ones.\r\n(Feel free to change any of my wording or formatting!)",
          "is_bot": false,
          "headline": "Mention parallel sessions; link to part 2",
          "author_name": "Nomi Harris",
          "author_login": "nlharris",
          "committed_at": "2018-06-29T18:32:10Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "735595c19f172a16a7a0d34a62d4d0947dec49f6",
          "body": "Update bosc2018_day1a.md",
          "is_bot": false,
          "headline": "Merge pull request #116 from jdidion/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2018-06-29T17:38:08Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "3a1f79371d443ad37b66129284d80710a31912a2",
          "body": null,
          "is_bot": false,
          "headline": "Update bosc2018_day1a.md",
          "author_name": "John Didion",
          "author_login": "jdidion",
          "committed_at": "2018-06-29T17:26:42Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e859fade97594e3f900d94ca9c7c0aa261ff838d",
          "body": null,
          "is_bot": false,
          "headline": "Notes from Day 2 of Bioinformatics Community Conference",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-29T12:40:40Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7d38b31807b1eb671e3bfc8080bad9af6226c229",
          "body": null,
          "is_bot": false,
          "headline": "Fix markdown formatting for presenters",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-28T13:34:24Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "338c3fb0fdf4e7ba7aac1f56bcce2dbc2eadf89b",
          "body": null,
          "is_bot": false,
          "headline": "Notes from day 1 of bioinformatics community conference",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-28T13:30:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fde83533f6c33c216b2c8513c946c2ff7cf2c9d0",
          "body": null,
          "is_bot": false,
          "headline": "Finalize bcbio validation talk for BOSC 2018",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-27T13:52:59Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fb8f03a4b83702782836f74a778f43915b14729e",
          "body": null,
          "is_bot": false,
          "headline": "BOSC2018 talk on bcbio validations",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-26T11:02:12Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6e968647a711af63fc45a4bd99b7bfb4d5a87b22",
          "body": null,
          "is_bot": false,
          "headline": "Finalize bcbio training for BOSC 2018",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-24T09:43:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "68255ba6c31098ae2953904a7fdab215f5d68299",
          "body": null,
          "is_bot": false,
          "headline": "Initial work on bcbio CWL + calling training for BOSC",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-22T09:43:24Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "308df7d0f5b90ad7b65655ae3fa4afa3c69b1372",
          "body": null,
          "is_bot": false,
          "headline": "Notes from NIH Data Commons workshop in Boston",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-05-31T17:46:26Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f73adddaf448c2789bb173ffc427f7ebfe0a08e0",
          "body": null,
          "is_bot": false,
          "headline": "PGP analysis walk through; untap, VCF, Arvados CWL",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-04-26T09:48:41Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "edb479c3f7ffe891aa6a3a190452f86746435107",
          "body": null,
          "is_bot": false,
          "headline": "Notes from CHI 2018 Hackathon workshop",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-04-23T08:48:07Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "78a71de81efc69d6d919187e0206ae54190249b9",
          "body": null,
          "is_bot": false,
          "headline": "Codefest poster for CHI 2018 Hackathon workshop",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-04-16T09:55:14Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5355e9ffbf80929a0eca27065e5af11610bbab44",
          "body": null,
          "is_bot": false,
          "headline": "Short talk on somatic calling with bcbio for DFCI discussion",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-04-06T19:41:32Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "77509219c52e738180e5bed7642db2713af75c54",
          "body": null,
          "is_bot": false,
          "headline": "Fix typos in abstract",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-03-20T09:57:54Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "426ce64a81399354e89ef254fa646dd760a8db77",
          "body": null,
          "is_bot": false,
          "headline": "bcbio validation abstract for BOSC 2018",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-03-18T15:55:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "bbdae40dbb180ee160802a316c3ef6e55e64cc05",
          "body": null,
          "is_bot": false,
          "headline": "Annotate BED files with hg38 alts",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-02-26T19:47:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fb5cd22352f408884bd342faf68cf37fc0e77f3c",
          "body": "make gff_to_genbank.py with python3 compatibility",
          "is_bot": false,
          "headline": "Merge pull request #114 from hsiaoyi0504/python3_compatible",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2018-02-23T11:04:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fa6498b260a9735e8b6d538fbaf1f1f28aaf14ba",
          "body": null,
          "is_bot": false,
          "headline": "make gff_to_genbank.py with python3 compatibility",
          "author_name": "Yi Hsiao",
          "author_login": "hsiaoyi0504",
          "committed_at": "2018-02-22T20:21:03Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "478bcdb5db29a3ef2c92567e29a27f6aeab26215",
          "body": "Fixed a typo",
          "is_bot": false,
          "headline": "Merge pull request #113 from hsiaoyi0504/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2018-02-22T11:34:01Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "03eaf1e5d117905e330b0c69f8bc1782fc667f02",
          "body": null,
          "is_bot": false,
          "headline": "Fixed a typo",
          "author_name": "hsiao yi",
          "author_login": "hsiaoyi0504",
          "committed_at": "2018-02-22T02:23:13Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9a9b4ea94775878d710218add605ba90ba1c826b",
          "body": null,
          "is_bot": false,
          "headline": "Codefest proposoal for Hackathon Workshop 2018",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-02-04T11:02:39Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "56f7b6ec49b5d6d06e3f5fcf027ef6c869ee1eff",
          "body": null,
          "is_bot": false,
          "headline": "Talk for Park lab bcbio discussion",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-01-26T11:24:12Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7ade67d1f9db642618227d6a6904d1d8deba4e5e",
          "body": null,
          "is_bot": false,
          "headline": "Slides for BIG talk on bcbio + CWL",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-11-02T10:08:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b6d890ca29aaf04902fbe80e713eef4c34d2220c",
          "body": null,
          "is_bot": false,
          "headline": "Fix disease typo. Thanks @mjafin",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-10-07T17:58:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5b1b8276c04331772ac0634d5bb358b95f401e84",
          "body": null,
          "is_bot": false,
          "headline": "Notes from DNAnexus user group meeting, day 2",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-10-07T09:31:59Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "685a99a9c5b3e0f09e3fef118bb78962d7729a16",
          "body": null,
          "is_bot": false,
          "headline": "Notes from DNAnexus connect day 1",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-10-06T13:11:59Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "73db7187fe9146f866d89d2a8944c74f0dae5c0c",
          "body": "Update chapman_research_statement.org",
          "is_bot": false,
          "headline": "Merge pull request #112 from sjhosui/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2017-08-18T18:16:42Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "ceaa1e35a6c7f498c3a8a2f065cb7d25994860a3",
          "body": null,
          "is_bot": false,
          "headline": "Merge branch 'master' into patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2017-08-18T18:16:29Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "de7558854321b00f98edc54844d7f6f21a396b6c",
          "body": null,
          "is_bot": false,
          "headline": "Rework opening paragraph to focus on science",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-08-18T15:27:22Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "18291898313a6e0bcc9920714f8e4f5baf40c9bb",
          "body": null,
          "is_bot": false,
          "headline": "Update chapman_research_statement.org",
          "author_name": "Shannan Ho Sui",
          "author_login": "sjhosui",
          "committed_at": "2017-08-18T15:26:58Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4871c97d393d497c2cddd3a6f37cb5ba7fc4299b",
          "body": "Thanks to Shannan Ho Sui for feedback",
          "is_bot": false,
          "headline": "Reorganize CV and research statement",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-08-17T19:26:35Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8c0a218efec56c626d6c3bc89a4c0a82098e406a",
          "body": null,
          "is_bot": false,
          "headline": "Update CV and research statement for Senior Scientist app",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-08-17T17:41:10Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "0608ae169c6f67dc175992e51fb31fc849ebb593",
          "body": null,
          "is_bot": false,
          "headline": "Fix formatting",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-23T10:26:50Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b17f3988a4cbe18c242759e8b5dad14fe6b97050",
          "body": null,
          "is_bot": false,
          "headline": "BOSC notes from day 2 morning",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-23T10:24:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "53493b0ea50fdcbe75e6bd84483b2062d5700810",
          "body": null,
          "is_bot": false,
          "headline": "BOSC: day 1 afternoon talks",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-23T06:39:58Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a8e96a56f87afa4efce8b87ea1fbd73117a4c3d4",
          "body": null,
          "is_bot": false,
          "headline": "Notes from BOSC day 1 morning",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-22T12:19:39Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b5c0b003681d43e831e959046c4063d6354dd62a",
          "body": null,
          "is_bot": false,
          "headline": "BOSC 2017 slides",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-22T05:57:54Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f05fc9d3de2c4e75e08772e70091809acf2f8a0a",
          "body": null,
          "is_bot": false,
          "headline": "Finalize teaching slides after run through",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-06T11:45:56Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9109e2774a5d4a378aac32fe44bae0b9b9c4bb8b",
          "body": null,
          "is_bot": false,
          "headline": "Variant calling talk: 2017 summer NGS long course",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-06T10:04:16Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "c40cd91dfebd0f6f4d2ca5949a289a1172a788e6",
          "body": null,
          "is_bot": false,
          "headline": "Adjust figures to fit URLs",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-05-01T09:40:19Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "19464c9b1b810fcd1b69bcc4b2c9df5f478f483a",
          "body": null,
          "is_bot": false,
          "headline": "CGC talk: finalize and describe interoperability",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-04-29T10:16:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1c8d79dc849cea409420db93bbb9728bc9979d7e",
          "body": null,
          "is_bot": false,
          "headline": "Initial talk for cancer genomics cloud training",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-04-25T10:01:35Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "756a480399ca78fb047dbd0fc07d92a4f4965da4",
          "body": null,
          "is_bot": false,
          "headline": "Fix Oliver's URL",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-04-14T00:51:54Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "af13fd5bc967c6d6e5f61fb99eaf3d97845e969a",
          "body": null,
          "is_bot": false,
          "headline": "Last tweaks to BOSC abstract before submission",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-04-13T18:38:21Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "185e78e93340673981abef00995c80b939c4231a",
          "body": null,
          "is_bot": false,
          "headline": "Shorten and clean up for single page abstract",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-04-13T10:04:38Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "20e80f39c5238a4b42c402fe4ae3348632826365",
          "body": null,
          "is_bot": false,
          "headline": "bcbio abstract for BOSC 2017",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-04-13T09:58:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "68a6b8ea7f926020150005ae532f9156e69b487f",
          "body": null,
          "is_bot": false,
          "headline": "Overview of heterogeneity status and plans in bcbio",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-03-28T15:33:31Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1ee41506021590cba77bc3a1afd846aea6042254",
          "body": null,
          "is_bot": false,
          "headline": "Writeup for Hackathon Workshop on Codefest",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-12-18T11:11:32Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dd0c81350fccf91f49310cd5628e97821fb4b6fe",
          "body": null,
          "is_bot": false,
          "headline": "Talk to BIG meeting: bcbio + CWL",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-11-03T10:00:55Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8cc002adeac11a5b1510f7890a7214b2c9ac4505",
          "body": null,
          "is_bot": false,
          "headline": "Talk for Broad software engineering seminar",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-09-28T09:56:04Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7cc2de87c8eebe0772280a82379ebc73c64a5cc7",
          "body": "Biopython deprecated and removed sub_features but the GFF code has not\nyet put in proper fixes. This works around the issue by adding\nsub_features when missing so GFF output still works correctly\nwith Biopython >= 1.68.\n\nFixes chapmanb/bcbb#110. Fixes biopython/biopython#928",
          "is_bot": false,
          "headline": "Support Biopython 1.68 with sub_features workaround",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-09-09T19:43:19Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "ad39feb6a044baa371c360fe5a0a4e4acc46e96c",
          "body": null,
          "is_bot": false,
          "headline": "Slides for long course teaching on variant calling",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-08-11T10:17:17Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5b731ec2b9e68360cbd2d4a065ead27887cdd8a8",
          "body": null,
          "is_bot": false,
          "headline": "Notes from BOSC day 2",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-07-10T01:02:11Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "263981dda3087dea0fc41aaa70eed1993c436dfb",
          "body": null,
          "is_bot": false,
          "headline": "Notes from BOSC 2016 day 1",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-07-09T10:55:11Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "607ee5a9d3629c711cde146ccb420482bbbfd074",
          "body": null,
          "is_bot": false,
          "headline": "Talk for BOSC 2016 on bcbio and CWL",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-07-08T11:03:05Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dec13d6a6a95513792de63fac42edf0b6785a237",
          "body": null,
          "is_bot": false,
          "headline": "Notes from variant modeling collaboration",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-06-04T09:51:37Z",
          "body_truncated": false,
          "is_coding_agent": false
        }
      ],
      "releases_count": 2,
      "commits_last_year": 0,
      "latest_release_at": "2021-10-06T13:26:49Z",
      "latest_release_tag": "v0.6.7",
      "releases_from_tags": true,
      "days_since_last_push": 531,
      "active_weeks_last_year": 0,
      "days_since_latest_release": 1749,
      "mean_days_between_releases": 3164.1
    },
    "community": {
      "has_readme": true,
      "has_license": false,
      "has_description": true,
      "has_contributing": false,
      "health_percentage": 28,
      "has_issue_template": false,
      "has_code_of_conduct": false,
      "has_pull_request_template": false
    },
    "ecosystem": {
      "packages": [
        {
          "name": "bcbio-gff",
          "exists": true,
          "license": "Biopython License",
          "keywords": [],
          "ecosystem": "pypi",
          "matches_repo": true,
          "registry_url": "https://pypi.org/project/bcbio-gff/",
          "is_deprecated": false,
          "latest_version": "0.7.1",
          "repository_url": "https://github.com/chapmanb/bcbb/tree/master/gff",
          "versions_count": 15,
          "total_downloads": null,
          "dependents_count": null,
          "deprecation_note": null,
          "maintainers_count": null,
          "monthly_downloads": null,
          "first_published_at": "2013-05-16T16:23:06.428814Z",
          "latest_published_at": "2024-01-29T14:06:00.728394Z",
          "latest_version_yanked": null,
          "days_since_latest_publish": 904
        },
        {
          "name": "bcbio-phyloblast",
          "exists": true,
          "license": "MIT",
          "keywords": [],
          "ecosystem": "pypi",
          "matches_repo": false,
          "registry_url": "https://pypi.org/project/bcbio-phyloblast/",
          "is_deprecated": false,
          "latest_version": "0.1.2",
          "repository_url": "http://bcbio.wordpress.com",
          "versions_count": 3,
          "total_downloads": null,
          "dependents_count": null,
          "deprecation_note": null,
          "maintainers_count": null,
          "monthly_downloads": null,
          "first_published_at": "2013-01-14T15:55:41.490494Z",
          "latest_published_at": "2013-02-28T10:38:26.776414Z",
          "latest_version_yanked": null,
          "days_since_latest_publish": 4891
        }
      ]
    },
    "popularity": {
      "forks": 241,
      "stars": 644,
      "watchers": 55,
      "fork_history": {
        "days": [
          {
            "date": "2009-03-11",
            "count": 1
          },
          {
            "date": "2009-05-10",
            "count": 1
          },
          {
            "date": "2009-11-16",
            "count": 1
          },
          {
            "date": "2010-03-18",
            "count": 1
          },
          {
            "date": "2010-05-10",
            "count": 1
          },
          {
            "date": "2010-10-07",
            "count": 1
          },
          {
            "date": "2010-11-23",
            "count": 1
          },
          {
            "date": "2010-12-12",
            "count": 1
          },
          {
            "date": "2011-03-23",
            "count": 1
          },
          {
            "date": "2011-07-02",
            "count": 1
          },
          {
            "date": "2011-07-08",
            "count": 1
          },
          {
            "date": "2011-07-18",
            "count": 1
          },
          {
            "date": "2011-09-09",
            "count": 1
          },
          {
            "date": "2011-09-29",
            "count": 1
          },
          {
            "date": "2011-12-19",
            "count": 1
          },
          {
            "date": "2012-01-12",
            "count": 1
          },
          {
            "date": "2012-02-09",
            "count": 1
          },
          {
            "date": "2012-02-20",
            "count": 1
          },
          {
            "date": "2012-02-22",
            "count": 1
          },
          {
            "date": "2012-03-12",
            "count": 1
          },
          {
            "date": "2012-04-26",
            "count": 1
          },
          {
            "date": "2012-05-10",
            "count": 1
          },
          {
            "date": "2012-05-23",
            "count": 1
          },
          {
            "date": "2012-06-07",
            "count": 1
          },
          {
            "date": "2012-07-08",
            "count": 1
          },
          {
            "date": "2012-08-31",
            "count": 1
          },
          {
            "date": "2012-09-06",
            "count": 1
          },
          {
            "date": "2012-10-25",
            "count": 1
          },
          {
            "date": "2012-11-26",
            "count": 1
          },
          {
            "date": "2012-11-30",
            "count": 1
          },
          {
            "date": "2013-01-23",
            "count": 1
          },
          {
            "date": "2013-01-26",
            "count": 1
          },
          {
            "date": "2013-02-09",
            "count": 1
          },
          {
            "date": "2013-03-26",
            "count": 1
          },
          {
            "date": "2013-04-05",
            "count": 1
          },
          {
            "date": "2013-04-16",
            "count": 1
          },
          {
            "date": "2013-04-26",
            "count": 1
          },
          {
            "date": "2013-05-16",
            "count": 1
          },
          {
            "date": "2013-05-20",
            "count": 1
          },
          {
            "date": "2013-07-10",
            "count": 1
          },
          {
            "date": "2013-07-18",
            "count": 1
          },
          {
            "date": "2013-07-21",
            "count": 1
          },
          {
            "date": "2013-08-20",
            "count": 1
          },
          {
            "date": "2013-10-08",
            "count": 1
          },
          {
            "date": "2013-10-14",
            "count": 1
          },
          {
            "date": "2013-10-15",
            "count": 1
          },
          {
            "date": "2013-11-03",
            "count": 1
          },
          {
            "date": "2013-11-09",
            "count": 1
          },
          {
            "date": "2013-11-30",
            "count": 1
          },
          {
            "date": "2014-01-13",
            "count": 1
          },
          {
            "date": "2014-01-18",
            "count": 1
          },
          {
            "date": "2014-03-10",
            "count": 1
          },
          {
            "date": "2014-03-23",
            "count": 1
          },
          {
            "date": "2014-03-27",
            "count": 1
          },
          {
            "date": "2014-04-13",
            "count": 1
          },
          {
            "date": "2014-04-14",
            "count": 1
          },
          {
            "date": "2014-04-15",
            "count": 1
          },
          {
            "date": "2014-05-07",
            "count": 1
          },
          {
            "date": "2014-05-23",
            "count": 1
          },
          {
            "date": "2014-05-29",
            "count": 1
          },
          {
            "date": "2014-06-18",
            "count": 1
          },
          {
            "date": "2014-08-11",
            "count": 1
          },
          {
            "date": "2014-09-17",
            "count": 1
          },
          {
            "date": "2014-09-22",
            "count": 1
          },
          {
            "date": "2014-10-13",
            "count": 1
          },
          {
            "date": "2014-10-14",
            "count": 1
          },
          {
            "date": "2014-10-23",
            "count": 1
          },
          {
            "date": "2014-10-31",
            "count": 1
          },
          {
            "date": "2014-11-10",
            "count": 1
          },
          {
            "date": "2014-11-12",
            "count": 1
          },
          {
            "date": "2014-11-15",
            "count": 1
          },
          {
            "date": "2014-12-19",
            "count": 1
          },
          {
            "date": "2014-12-29",
            "count": 1
          },
          {
            "date": "2015-01-10",
            "count": 1
          },
          {
            "date": "2015-01-19",
            "count": 1
          },
          {
            "date": "2015-01-29",
            "count": 1
          },
          {
            "date": "2015-01-30",
            "count": 1
          },
          {
            "date": "2015-04-16",
            "count": 1
          },
          {
            "date": "2015-05-05",
            "count": 1
          },
          {
            "date": "2015-05-19",
            "count": 1
          },
          {
            "date": "2015-06-09",
            "count": 1
          },
          {
            "date": "2015-06-26",
            "count": 1
          },
          {
            "date": "2015-08-05",
            "count": 1
          },
          {
            "date": "2015-08-06",
            "count": 1
          },
          {
            "date": "2015-08-29",
            "count": 3
          },
          {
            "date": "2015-09-18",
            "count": 1
          },
          {
            "date": "2015-10-20",
            "count": 1
          },
          {
            "date": "2015-10-28",
            "count": 1
          },
          {
            "date": "2015-11-28",
            "count": 1
          },
          {
            "date": "2015-12-11",
            "count": 1
          },
          {
            "date": "2015-12-18",
            "count": 1
          },
          {
            "date": "2016-01-19",
            "count": 1
          },
          {
            "date": "2016-01-30",
            "count": 1
          },
          {
            "date": "2016-02-17",
            "count": 1
          },
          {
            "date": "2016-03-12",
            "count": 1
          },
          {
            "date": "2016-03-16",
            "count": 1
          },
          {
            "date": "2016-03-30",
            "count": 1
          },
          {
            "date": "2016-04-07",
            "count": 1
          },
          {
            "date": "2016-04-10",
            "count": 1
          },
          {
            "date": "2016-04-14",
            "count": 1
          },
          {
            "date": "2016-05-03",
            "count": 1
          },
          {
            "date": "2016-06-03",
            "count": 2
          },
          {
            "date": "2016-06-06",
            "count": 1
          },
          {
            "date": "2016-06-20",
            "count": 1
          },
          {
            "date": "2016-07-07",
            "count": 1
          },
          {
            "date": "2016-08-08",
            "count": 1
          },
          {
            "date": "2016-09-06",
            "count": 1
          },
          {
            "date": "2016-09-16",
            "count": 1
          },
          {
            "date": "2016-10-05",
            "count": 1
          },
          {
            "date": "2016-10-26",
            "count": 1
          },
          {
            "date": "2016-10-27",
            "count": 1
          },
          {
            "date": "2016-11-06",
            "count": 1
          },
          {
            "date": "2016-11-14",
            "count": 1
          },
          {
            "date": "2016-11-22",
            "count": 1
          },
          {
            "date": "2016-12-30",
            "count": 1
          },
          {
            "date": "2017-02-12",
            "count": 1
          },
          {
            "date": "2017-02-21",
            "count": 1
          },
          {
            "date": "2017-03-03",
            "count": 1
          },
          {
            "date": "2017-04-18",
            "count": 1
          },
          {
            "date": "2017-06-01",
            "count": 1
          },
          {
            "date": "2017-07-16",
            "count": 1
          },
          {
            "date": "2017-07-24",
            "count": 1
          },
          {
            "date": "2017-08-17",
            "count": 1
          },
          {
            "date": "2017-10-11",
            "count": 1
          },
          {
            "date": "2017-11-09",
            "count": 1
          },
          {
            "date": "2017-11-16",
            "count": 1
          },
          {
            "date": "2018-01-20",
            "count": 1
          },
          {
            "date": "2018-01-22",
            "count": 1
          },
          {
            "date": "2018-02-22",
            "count": 1
          },
          {
            "date": "2018-06-13",
            "count": 1
          },
          {
            "date": "2018-06-25",
            "count": 1
          },
          {
            "date": "2018-06-28",
            "count": 1
          },
          {
            "date": "2018-06-29",
            "count": 1
          },
          {
            "date": "2018-07-11",
            "count": 1
          },
          {
            "date": "2018-07-12",
            "count": 1
          },
          {
            "date": "2018-07-27",
            "count": 1
          },
          {
            "date": "2018-07-30",
            "count": 2
          },
          {
            "date": "2018-08-09",
            "count": 2
          },
          {
            "date": "2018-08-23",
            "count": 1
          },
          {
            "date": "2018-09-04",
            "count": 1
          },
          {
            "date": "2018-09-30",
            "count": 1
          },
          {
            "date": "2018-10-11",
            "count": 1
          },
          {
            "date": "2018-10-26",
            "count": 1
          },
          {
            "date": "2018-11-08",
            "count": 1
          },
          {
            "date": "2018-12-20",
            "count": 1
          },
          {
            "date": "2019-01-08",
            "count": 1
          },
          {
            "date": "2019-02-05",
            "count": 1
          },
          {
            "date": "2019-02-20",
            "count": 1
          },
          {
            "date": "2019-02-21",
            "count": 1
          },
          {
            "date": "2019-02-22",
            "count": 1
          },
          {
            "date": "2019-03-03",
            "count": 1
          },
          {
            "date": "2019-03-27",
            "count": 1
          },
          {
            "date": "2019-06-07",
            "count": 1
          },
          {
            "date": "2019-06-15",
            "count": 1
          },
          {
            "date": "2019-06-19",
            "count": 1
          },
          {
            "date": "2019-07-08",
            "count": 1
          },
          {
            "date": "2019-07-12",
            "count": 1
          },
          {
            "date": "2019-07-26",
            "count": 1
          },
          {
            "date": "2019-09-24",
            "count": 1
          },
          {
            "date": "2019-11-19",
            "count": 1
          },
          {
            "date": "2020-01-02",
            "count": 1
          },
          {
            "date": "2020-01-15",
            "count": 1
          },
          {
            "date": "2020-02-13",
            "count": 1
          },
          {
            "date": "2020-03-11",
            "count": 1
          },
          {
            "date": "2020-05-19",
            "count": 1
          },
          {
            "date": "2020-06-26",
            "count": 1
          },
          {
            "date": "2020-08-06",
            "count": 1
          },
          {
            "date": "2020-08-07",
            "count": 1
          },
          {
            "date": "2020-08-24",
            "count": 1
          },
          {
            "date": "2020-09-09",
            "count": 2
          },
          {
            "date": "2020-10-03",
            "count": 1
          },
          {
            "date": "2020-10-05",
            "count": 1
          },
          {
            "date": "2020-10-19",
            "count": 1
          },
          {
            "date": "2020-11-28",
            "count": 1
          },
          {
            "date": "2021-01-31",
            "count": 1
          },
          {
            "date": "2021-03-17",
            "count": 1
          },
          {
            "date": "2021-03-29",
            "count": 2
          },
          {
            "date": "2021-04-12",
            "count": 1
          },
          {
            "date": "2021-05-22",
            "count": 1
          },
          {
            "date": "2021-06-10",
            "count": 1
          },
          {
            "date": "2021-07-22",
            "count": 1
          },
          {
            "date": "2021-08-02",
            "count": 1
          },
          {
            "date": "2021-09-21",
            "count": 1
          },
          {
            "date": "2021-10-05",
            "count": 1
          },
          {
            "date": "2021-10-06",
            "count": 1
          },
          {
            "date": "2021-12-21",
            "count": 1
          },
          {
            "date": "2022-02-09",
            "count": 1
          },
          {
            "date": "2022-04-05",
            "count": 1
          },
          {
            "date": "2022-04-18",
            "count": 1
          },
          {
            "date": "2022-04-19",
            "count": 1
          },
          {
            "date": "2022-06-06",
            "count": 1
          },
          {
            "date": "2022-07-16",
            "count": 1
          },
          {
            "date": "2022-07-18",
            "count": 1
          },
          {
            "date": "2022-08-04",
            "count": 1
          },
          {
            "date": "2022-08-12",
            "count": 1
          },
          {
            "date": "2022-09-23",
            "count": 1
          },
          {
            "date": "2022-10-17",
            "count": 1
          },
          {
            "date": "2022-11-12",
            "count": 1
          },
          {
            "date": "2022-12-28",
            "count": 1
          },
          {
            "date": "2023-02-14",
            "count": 1
          },
          {
            "date": "2023-03-14",
            "count": 1
          },
          {
            "date": "2023-03-29",
            "count": 1
          },
          {
            "date": "2023-04-05",
            "count": 1
          },
          {
            "date": "2023-04-19",
            "count": 1
          },
          {
            "date": "2023-04-28",
            "count": 1
          },
          {
            "date": "2023-05-22",
            "count": 1
          },
          {
            "date": "2023-06-16",
            "count": 1
          },
          {
            "date": "2023-08-14",
            "count": 1
          },
          {
            "date": "2023-09-24",
            "count": 1
          },
          {
            "date": "2023-11-24",
            "count": 1
          },
          {
            "date": "2023-11-27",
            "count": 1
          },
          {
            "date": "2024-01-02",
            "count": 1
          },
          {
            "date": "2024-01-26",
            "count": 1
          },
          {
            "date": "2024-05-14",
            "count": 1
          },
          {
            "date": "2024-05-15",
            "count": 1
          },
          {
            "date": "2024-11-05",
            "count": 1
          },
          {
            "date": "2025-02-04",
            "count": 1
          },
          {
            "date": "2025-11-22",
            "count": 1
          },
          {
            "date": "2026-02-03",
            "count": 1
          },
          {
            "date": "2026-05-23",
            "count": 1
          }
        ],
        "complete": true,
        "collected": 227,
        "total_forks": 241
      },
      "star_history": {
        "days": [
          {
            "date": "2008-12-09",
            "count": 20
          },
          {
            "date": "2009-01-10",
            "count": 1
          },
          {
            "date": "2009-01-13",
            "count": 1
          },
          {
            "date": "2009-01-16",
            "count": 1
          },
          {
            "date": "2009-01-23",
            "count": 1
          },
          {
            "date": "2009-01-26",
            "count": 2
          },
          {
            "date": "2009-02-03",
            "count": 1
          },
          {
            "date": "2009-02-05",
            "count": 1
          },
          {
            "date": "2009-02-08",
            "count": 1
          },
          {
            "date": "2009-02-25",
            "count": 1
          },
          {
            "date": "2009-02-27",
            "count": 1
          },
          {
            "date": "2009-03-16",
            "count": 1
          },
          {
            "date": "2009-04-08",
            "count": 1
          },
          {
            "date": "2009-04-09",
            "count": 1
          },
          {
            "date": "2009-04-29",
            "count": 1
          },
          {
            "date": "2009-05-07",
            "count": 1
          },
          {
            "date": "2009-05-11",
            "count": 1
          },
          {
            "date": "2009-05-15",
            "count": 1
          },
          {
            "date": "2009-06-21",
            "count": 1
          },
          {
            "date": "2009-06-26",
            "count": 1
          },
          {
            "date": "2009-07-03",
            "count": 1
          },
          {
            "date": "2009-07-13",
            "count": 1
          },
          {
            "date": "2009-07-19",
            "count": 1
          },
          {
            "date": "2009-07-20",
            "count": 1
          },
          {
            "date": "2009-08-14",
            "count": 1
          },
          {
            "date": "2009-08-17",
            "count": 1
          },
          {
            "date": "2009-08-28",
            "count": 1
          },
          {
            "date": "2009-08-31",
            "count": 1
          },
          {
            "date": "2009-09-09",
            "count": 1
          },
          {
            "date": "2009-10-06",
            "count": 1
          },
          {
            "date": "2009-10-18",
            "count": 1
          },
          {
            "date": "2009-10-28",
            "count": 1
          },
          {
            "date": "2009-11-02",
            "count": 1
          },
          {
            "date": "2009-11-03",
            "count": 1
          },
          {
            "date": "2009-11-22",
            "count": 1
          },
          {
            "date": "2010-01-03",
            "count": 1
          },
          {
            "date": "2010-01-11",
            "count": 1
          },
          {
            "date": "2010-02-04",
            "count": 1
          },
          {
            "date": "2010-02-16",
            "count": 1
          },
          {
            "date": "2010-02-24",
            "count": 1
          },
          {
            "date": "2010-02-25",
            "count": 1
          },
          {
            "date": "2010-03-03",
            "count": 1
          },
          {
            "date": "2010-03-18",
            "count": 1
          },
          {
            "date": "2010-03-19",
            "count": 1
          },
          {
            "date": "2010-03-21",
            "count": 1
          },
          {
            "date": "2010-03-22",
            "count": 1
          },
          {
            "date": "2010-03-29",
            "count": 1
          },
          {
            "date": "2010-04-15",
            "count": 1
          },
          {
            "date": "2010-04-23",
            "count": 1
          },
          {
            "date": "2010-04-29",
            "count": 1
          },
          {
            "date": "2010-06-08",
            "count": 1
          },
          {
            "date": "2010-06-18",
            "count": 1
          },
          {
            "date": "2010-07-02",
            "count": 1
          },
          {
            "date": "2010-07-10",
            "count": 1
          },
          {
            "date": "2010-07-16",
            "count": 1
          },
          {
            "date": "2010-07-20",
            "count": 1
          },
          {
            "date": "2010-07-21",
            "count": 1
          },
          {
            "date": "2010-08-30",
            "count": 1
          },
          {
            "date": "2010-09-24",
            "count": 1
          },
          {
            "date": "2010-09-28",
            "count": 2
          },
          {
            "date": "2010-10-08",
            "count": 1
          },
          {
            "date": "2010-10-10",
            "count": 1
          },
          {
            "date": "2010-10-17",
            "count": 1
          },
          {
            "date": "2010-10-25",
            "count": 1
          },
          {
            "date": "2010-11-02",
            "count": 1
          },
          {
            "date": "2010-11-06",
            "count": 1
          },
          {
            "date": "2010-11-30",
            "count": 1
          },
          {
            "date": "2010-12-02",
            "count": 1
          },
          {
            "date": "2010-12-21",
            "count": 1
          },
          {
            "date": "2011-01-02",
            "count": 1
          },
          {
            "date": "2011-01-26",
            "count": 2
          },
          {
            "date": "2011-01-31",
            "count": 1
          },
          {
            "date": "2011-02-09",
            "count": 1
          },
          {
            "date": "2011-02-12",
            "count": 1
          },
          {
            "date": "2011-02-13",
            "count": 1
          },
          {
            "date": "2011-02-17",
            "count": 1
          },
          {
            "date": "2011-03-04",
            "count": 2
          },
          {
            "date": "2011-03-08",
            "count": 1
          },
          {
            "date": "2011-03-14",
            "count": 1
          },
          {
            "date": "2011-03-20",
            "count": 1
          },
          {
            "date": "2011-03-21",
            "count": 1
          },
          {
            "date": "2011-03-23",
            "count": 1
          },
          {
            "date": "2011-04-05",
            "count": 1
          },
          {
            "date": "2011-04-19",
            "count": 1
          },
          {
            "date": "2011-05-16",
            "count": 1
          },
          {
            "date": "2011-05-22",
            "count": 1
          },
          {
            "date": "2011-06-12",
            "count": 1
          },
          {
            "date": "2011-06-25",
            "count": 1
          },
          {
            "date": "2011-06-30",
            "count": 1
          },
          {
            "date": "2011-07-18",
            "count": 1
          },
          {
            "date": "2011-08-01",
            "count": 1
          },
          {
            "date": "2011-08-15",
            "count": 1
          },
          {
            "date": "2011-09-10",
            "count": 1
          },
          {
            "date": "2011-09-28",
            "count": 1
          },
          {
            "date": "2011-09-30",
            "count": 1
          },
          {
            "date": "2011-10-01",
            "count": 1
          },
          {
            "date": "2011-10-04",
            "count": 1
          },
          {
            "date": "2011-10-05",
            "count": 1
          },
          {
            "date": "2011-10-13",
            "count": 1
          },
          {
            "date": "2011-10-22",
            "count": 1
          },
          {
            "date": "2011-11-02",
            "count": 1
          },
          {
            "date": "2011-11-26",
            "count": 1
          },
          {
            "date": "2011-12-01",
            "count": 1
          },
          {
            "date": "2011-12-13",
            "count": 1
          },
          {
            "date": "2011-12-28",
            "count": 1
          },
          {
            "date": "2012-01-03",
            "count": 1
          },
          {
            "date": "2012-02-07",
            "count": 1
          },
          {
            "date": "2012-02-08",
            "count": 1
          },
          {
            "date": "2012-02-20",
            "count": 1
          },
          {
            "date": "2012-02-22",
            "count": 1
          },
          {
            "date": "2012-03-05",
            "count": 1
          },
          {
            "date": "2012-03-17",
            "count": 1
          },
          {
            "date": "2012-04-16",
            "count": 1
          },
          {
            "date": "2012-04-21",
            "count": 1
          },
          {
            "date": "2012-05-07",
            "count": 1
          },
          {
            "date": "2012-05-29",
            "count": 1
          },
          {
            "date": "2012-06-13",
            "count": 1
          },
          {
            "date": "2012-07-30",
            "count": 1
          },
          {
            "date": "2012-09-12",
            "count": 1
          },
          {
            "date": "2013-01-16",
            "count": 1
          },
          {
            "date": "2013-03-06",
            "count": 1
          },
          {
            "date": "2013-04-02",
            "count": 1
          },
          {
            "date": "2013-04-25",
            "count": 1
          },
          {
            "date": "2013-04-30",
            "count": 1
          },
          {
            "date": "2013-05-07",
            "count": 1
          },
          {
            "date": "2013-05-09",
            "count": 1
          },
          {
            "date": "2013-05-10",
            "count": 1
          },
          {
            "date": "2013-05-16",
            "count": 1
          },
          {
            "date": "2013-05-20",
            "count": 1
          },
          {
            "date": "2013-05-24",
            "count": 2
          },
          {
            "date": "2013-06-03",
            "count": 1
          },
          {
            "date": "2013-07-17",
            "count": 3
          },
          {
            "date": "2013-07-20",
            "count": 1
          },
          {
            "date": "2013-07-28",
            "count": 1
          },
          {
            "date": "2013-08-12",
            "count": 1
          },
          {
            "date": "2013-08-13",
            "count": 1
          },
          {
            "date": "2013-08-14",
            "count": 1
          },
          {
            "date": "2013-09-08",
            "count": 1
          },
          {
            "date": "2013-09-26",
            "count": 1
          },
          {
            "date": "2013-10-27",
            "count": 1
          },
          {
            "date": "2013-11-01",
            "count": 1
          },
          {
            "date": "2013-11-09",
            "count": 1
          },
          {
            "date": "2013-11-26",
            "count": 1
          },
          {
            "date": "2013-12-02",
            "count": 1
          },
          {
            "date": "2013-12-08",
            "count": 1
          },
          {
            "date": "2013-12-10",
            "count": 1
          },
          {
            "date": "2014-01-13",
            "count": 2
          },
          {
            "date": "2014-01-15",
            "count": 1
          },
          {
            "date": "2014-01-26",
            "count": 1
          },
          {
            "date": "2014-02-10",
            "count": 1
          },
          {
            "date": "2014-02-23",
            "count": 1
          },
          {
            "date": "2014-02-28",
            "count": 1
          },
          {
            "date": "2014-03-13",
            "count": 1
          },
          {
            "date": "2014-03-19",
            "count": 1
          },
          {
            "date": "2014-03-26",
            "count": 1
          },
          {
            "date": "2014-03-27",
            "count": 2
          },
          {
            "date": "2014-04-07",
            "count": 1
          },
          {
            "date": "2014-04-24",
            "count": 2
          },
          {
            "date": "2014-04-29",
            "count": 1
          },
          {
            "date": "2014-05-02",
            "count": 1
          },
          {
            "date": "2014-05-07",
            "count": 1
          },
          {
            "date": "2014-05-15",
            "count": 1
          },
          {
            "date": "2014-05-16",
            "count": 1
          },
          {
            "date": "2014-05-26",
            "count": 2
          },
          {
            "date": "2014-06-10",
            "count": 1
          },
          {
            "date": "2014-06-22",
            "count": 1
          },
          {
            "date": "2014-06-27",
            "count": 1
          },
          {
            "date": "2014-07-09",
            "count": 1
          },
          {
            "date": "2014-07-10",
            "count": 1
          },
          {
            "date": "2014-07-13",
            "count": 1
          },
          {
            "date": "2014-07-14",
            "count": 1
          },
          {
            "date": "2014-07-24",
            "count": 1
          },
          {
            "date": "2014-08-01",
            "count": 1
          },
          {
            "date": "2014-08-31",
            "count": 1
          },
          {
            "date": "2014-09-20",
            "count": 1
          },
          {
            "date": "2014-09-29",
            "count": 1
          },
          {
            "date": "2014-09-30",
            "count": 1
          },
          {
            "date": "2014-10-05",
            "count": 1
          },
          {
            "date": "2014-10-10",
            "count": 1
          },
          {
            "date": "2014-10-21",
            "count": 1
          },
          {
            "date": "2014-10-24",
            "count": 1
          },
          {
            "date": "2014-11-05",
            "count": 1
          },
          {
            "date": "2014-11-11",
            "count": 1
          },
          {
            "date": "2014-11-12",
            "count": 1
          },
          {
            "date": "2014-11-13",
            "count": 1
          },
          {
            "date": "2014-11-15",
            "count": 1
          },
          {
            "date": "2014-12-04",
            "count": 1
          },
          {
            "date": "2014-12-07",
            "count": 1
          },
          {
            "date": "2014-12-11",
            "count": 1
          },
          {
            "date": "2015-01-04",
            "count": 1
          },
          {
            "date": "2015-01-05",
            "count": 1
          },
          {
            "date": "2015-01-15",
            "count": 1
          },
          {
            "date": "2015-01-20",
            "count": 2
          },
          {
            "date": "2015-01-25",
            "count": 1
          },
          {
            "date": "2015-01-27",
            "count": 1
          },
          {
            "date": "2015-01-29",
            "count": 1
          },
          {
            "date": "2015-02-10",
            "count": 1
          },
          {
            "date": "2015-02-14",
            "count": 1
          },
          {
            "date": "2015-02-20",
            "count": 1
          },
          {
            "date": "2015-03-02",
            "count": 1
          },
          {
            "date": "2015-03-06",
            "count": 1
          },
          {
            "date": "2015-04-06",
            "count": 1
          },
          {
            "date": "2015-04-11",
            "count": 1
          },
          {
            "date": "2015-05-04",
            "count": 1
          },
          {
            "date": "2015-05-12",
            "count": 1
          },
          {
            "date": "2015-06-11",
            "count": 1
          },
          {
            "date": "2015-06-17",
            "count": 1
          },
          {
            "date": "2015-06-29",
            "count": 1
          },
          {
            "date": "2015-07-07",
            "count": 1
          },
          {
            "date": "2015-07-21",
            "count": 1
          },
          {
            "date": "2015-08-07",
            "count": 1
          },
          {
            "date": "2015-08-10",
            "count": 1
          },
          {
            "date": "2015-08-11",
            "count": 1
          },
          {
            "date": "2015-08-12",
            "count": 1
          },
          {
            "date": "2015-08-17",
            "count": 1
          },
          {
            "date": "2015-08-26",
            "count": 1
          },
          {
            "date": "2015-08-28",
            "count": 1
          },
          {
            "date": "2015-09-12",
            "count": 1
          },
          {
            "date": "2015-09-29",
            "count": 1
          },
          {
            "date": "2015-10-05",
            "count": 1
          },
          {
            "date": "2015-10-12",
            "count": 1
          },
          {
            "date": "2015-10-14",
            "count": 1
          },
          {
            "date": "2015-10-27",
            "count": 1
          },
          {
            "date": "2015-10-30",
            "count": 1
          },
          {
            "date": "2015-11-05",
            "count": 1
          },
          {
            "date": "2015-11-09",
            "count": 1
          },
          {
            "date": "2015-11-20",
            "count": 1
          },
          {
            "date": "2015-11-27",
            "count": 1
          },
          {
            "date": "2015-11-28",
            "count": 2
          },
          {
            "date": "2015-12-09",
            "count": 1
          },
          {
            "date": "2015-12-15",
            "count": 1
          },
          {
            "date": "2015-12-22",
            "count": 1
          },
          {
            "date": "2016-01-04",
            "count": 1
          },
          {
            "date": "2016-01-08",
            "count": 1
          },
          {
            "date": "2016-01-09",
            "count": 1
          },
          {
            "date": "2016-01-19",
            "count": 1
          },
          {
            "date": "2016-02-05",
            "count": 1
          },
          {
            "date": "2016-02-11",
            "count": 1
          },
          {
            "date": "2016-02-22",
            "count": 1
          },
          {
            "date": "2016-03-04",
            "count": 1
          },
          {
            "date": "2016-03-05",
            "count": 1
          },
          {
            "date": "2016-03-08",
            "count": 1
          },
          {
            "date": "2016-03-16",
            "count": 1
          },
          {
            "date": "2016-04-06",
            "count": 1
          },
          {
            "date": "2016-04-09",
            "count": 1
          },
          {
            "date": "2016-04-12",
            "count": 1
          },
          {
            "date": "2016-04-14",
            "count": 1
          },
          {
            "date": "2016-05-18",
            "count": 2
          },
          {
            "date": "2016-05-19",
            "count": 1
          },
          {
            "date": "2016-06-02",
            "count": 1
          },
          {
            "date": "2016-06-07",
            "count": 1
          },
          {
            "date": "2016-06-21",
            "count": 1
          },
          {
            "date": "2016-07-14",
            "count": 1
          },
          {
            "date": "2016-07-18",
            "count": 1
          },
          {
            "date": "2016-08-18",
            "count": 1
          },
          {
            "date": "2016-08-19",
            "count": 1
          },
          {
            "date": "2016-08-27",
            "count": 1
          },
          {
            "date": "2016-09-07",
            "count": 1
          },
          {
            "date": "2016-09-09",
            "count": 1
          },
          {
            "date": "2016-09-10",
            "count": 1
          },
          {
            "date": "2016-09-12",
            "count": 1
          },
          {
            "date": "2016-09-15",
            "count": 1
          },
          {
            "date": "2016-09-23",
            "count": 1
          },
          {
            "date": "2016-10-06",
            "count": 4
          },
          {
            "date": "2016-10-13",
            "count": 1
          },
          {
            "date": "2016-10-14",
            "count": 1
          },
          {
            "date": "2016-10-20",
            "count": 1
          },
          {
            "date": "2016-10-26",
            "count": 1
          },
          {
            "date": "2016-11-09",
            "count": 1
          },
          {
            "date": "2016-11-22",
            "count": 1
          },
          {
            "date": "2016-11-28",
            "count": 1
          },
          {
            "date": "2016-12-14",
            "count": 1
          },
          {
            "date": "2016-12-20",
            "count": 1
          },
          {
            "date": "2016-12-21",
            "count": 1
          },
          {
            "date": "2017-01-03",
            "count": 1
          },
          {
            "date": "2017-01-15",
            "count": 1
          },
          {
            "date": "2017-01-20",
            "count": 1
          },
          {
            "date": "2017-02-21",
            "count": 1
          },
          {
            "date": "2017-02-22",
            "count": 1
          },
          {
            "date": "2017-02-25",
            "count": 1
          },
          {
            "date": "2017-03-12",
            "count": 1
          },
          {
            "date": "2017-03-20",
            "count": 1
          },
          {
            "date": "2017-03-22",
            "count": 1
          },
          {
            "date": "2017-03-31",
            "count": 1
          },
          {
            "date": "2017-04-20",
            "count": 1
          },
          {
            "date": "2017-04-25",
            "count": 1
          },
          {
            "date": "2017-04-27",
            "count": 2
          },
          {
            "date": "2017-04-30",
            "count": 1
          },
          {
            "date": "2017-05-13",
            "count": 1
          },
          {
            "date": "2017-05-16",
            "count": 1
          },
          {
            "date": "2017-05-17",
            "count": 1
          },
          {
            "date": "2017-06-30",
            "count": 1
          },
          {
            "date": "2017-07-10",
            "count": 1
          },
          {
            "date": "2017-07-12",
            "count": 1
          },
          {
            "date": "2017-07-15",
            "count": 1
          },
          {
            "date": "2017-07-16",
            "count": 2
          },
          {
            "date": "2017-07-17",
            "count": 1
          },
          {
            "date": "2017-07-22",
            "count": 3
          },
          {
            "date": "2017-07-23",
            "count": 5
          },
          {
            "date": "2017-07-24",
            "count": 2
          },
          {
            "date": "2017-07-25",
            "count": 2
          },
          {
            "date": "2017-07-26",
            "count": 2
          },
          {
            "date": "2017-08-13",
            "count": 1
          },
          {
            "date": "2017-08-23",
            "count": 1
          },
          {
            "date": "2017-09-04",
            "count": 1
          },
          {
            "date": "2017-09-09",
            "count": 1
          },
          {
            "date": "2017-09-12",
            "count": 1
          },
          {
            "date": "2017-09-18",
            "count": 1
          },
          {
            "date": "2017-10-01",
            "count": 1
          },
          {
            "date": "2017-10-08",
            "count": 1
          },
          {
            "date": "2017-10-20",
            "count": 1
          },
          {
            "date": "2017-10-30",
            "count": 1
          },
          {
            "date": "2017-11-09",
            "count": 1
          },
          {
            "date": "2017-11-19",
            "count": 1
          },
          {
            "date": "2017-12-09",
            "count": 1
          },
          {
            "date": "2017-12-12",
            "count": 1
          },
          {
            "date": "2017-12-13",
            "count": 1
          },
          {
            "date": "2017-12-19",
            "count": 1
          },
          {
            "date": "2017-12-25",
            "count": 1
          },
          {
            "date": "2017-12-29",
            "count": 1
          },
          {
            "date": "2018-01-20",
            "count": 1
          },
          {
            "date": "2018-01-23",
            "count": 1
          },
          {
            "date": "2018-01-24",
            "count": 1
          },
          {
            "date": "2018-01-29",
            "count": 1
          },
          {
            "date": "2018-02-03",
            "count": 1
          },
          {
            "date": "2018-02-20",
            "count": 1
          },
          {
            "date": "2018-02-21",
            "count": 1
          },
          {
            "date": "2018-03-19",
            "count": 1
          },
          {
            "date": "2018-04-26",
            "count": 1
          },
          {
            "date": "2018-04-30",
            "count": 1
          },
          {
            "date": "2018-05-23",
            "count": 1
          },
          {
            "date": "2018-05-31",
            "count": 1
          },
          {
            "date": "2018-06-25",
            "count": 2
          },
          {
            "date": "2018-07-05",
            "count": 1
          },
          {
            "date": "2018-07-07",
            "count": 2
          },
          {
            "date": "2018-07-11",
            "count": 2
          },
          {
            "date": "2018-07-30",
            "count": 1
          },
          {
            "date": "2018-08-01",
            "count": 1
          },
          {
            "date": "2018-08-03",
            "count": 1
          },
          {
            "date": "2018-08-04",
            "count": 1
          },
          {
            "date": "2018-08-11",
            "count": 1
          },
          {
            "date": "2018-08-26",
            "count": 1
          },
          {
            "date": "2018-09-04",
            "count": 1
          },
          {
            "date": "2018-09-20",
            "count": 1
          },
          {
            "date": "2018-09-28",
            "count": 1
          },
          {
            "date": "2018-10-04",
            "count": 1
          },
          {
            "date": "2018-10-13",
            "count": 1
          },
          {
            "date": "2018-10-24",
            "count": 1
          },
          {
            "date": "2018-11-13",
            "count": 1
          },
          {
            "date": "2018-11-16",
            "count": 1
          },
          {
            "date": "2018-11-21",
            "count": 1
          },
          {
            "date": "2018-12-14",
            "count": 1
          },
          {
            "date": "2018-12-29",
            "count": 1
          },
          {
            "date": "2019-01-01",
            "count": 1
          },
          {
            "date": "2019-01-25",
            "count": 2
          },
          {
            "date": "2019-01-31",
            "count": 1
          },
          {
            "date": "2019-02-08",
            "count": 1
          },
          {
            "date": "2019-02-13",
            "count": 1
          },
          {
            "date": "2019-02-18",
            "count": 2
          },
          {
            "date": "2019-02-21",
            "count": 1
          },
          {
            "date": "2019-03-01",
            "count": 1
          },
          {
            "date": "2019-03-08",
            "count": 1
          },
          {
            "date": "2019-03-09",
            "count": 1
          },
          {
            "date": "2019-03-11",
            "count": 1
          },
          {
            "date": "2019-03-20",
            "count": 1
          },
          {
            "date": "2019-04-11",
            "count": 1
          },
          {
            "date": "2019-04-18",
            "count": 1
          },
          {
            "date": "2019-05-15",
            "count": 2
          },
          {
            "date": "2019-06-05",
            "count": 1
          },
          {
            "date": "2019-06-13",
            "count": 1
          },
          {
            "date": "2019-06-15",
            "count": 1
          },
          {
            "date": "2019-06-26",
            "count": 1
          },
          {
            "date": "2019-07-12",
            "count": 1
          },
          {
            "date": "2019-07-24",
            "count": 1
          },
          {
            "date": "2019-08-12",
            "count": 1
          },
          {
            "date": "2019-08-22",
            "count": 1
          },
          {
            "date": "2019-08-28",
            "count": 1
          },
          {
            "date": "2019-09-13",
            "count": 1
          },
          {
            "date": "2019-09-26",
            "count": 1
          },
          {
            "date": "2019-10-14",
            "count": 1
          },
          {
            "date": "2019-10-23",
            "count": 1
          },
          {
            "date": "2019-11-08",
            "count": 1
          },
          {
            "date": "2019-12-19",
            "count": 1
          },
          {
            "date": "2019-12-27",
            "count": 1
          },
          {
            "date": "2020-01-02",
            "count": 1
          },
          {
            "date": "2020-01-11",
            "count": 1
          },
          {
            "date": "2020-01-15",
            "count": 1
          },
          {
            "date": "2020-01-22",
            "count": 1
          },
          {
            "date": "2020-01-29",
            "count": 1
          },
          {
            "date": "2020-02-05",
            "count": 1
          },
          {
            "date": "2020-02-25",
            "count": 1
          },
          {
            "date": "2020-02-26",
            "count": 1
          },
          {
            "date": "2020-03-25",
            "count": 1
          },
          {
            "date": "2020-03-26",
            "count": 1
          },
          {
            "date": "2020-03-31",
            "count": 1
          },
          {
            "date": "2020-04-11",
            "count": 1
          },
          {
            "date": "2020-04-23",
            "count": 1
          },
          {
            "date": "2020-04-25",
            "count": 1
          },
          {
            "date": "2020-05-01",
            "count": 1
          },
          {
            "date": "2020-05-08",
            "count": 2
          },
          {
            "date": "2020-05-19",
            "count": 1
          },
          {
            "date": "2020-06-21",
            "count": 1
          },
          {
            "date": "2020-07-31",
            "count": 1
          },
          {
            "date": "2020-08-25",
            "count": 1
          },
          {
            "date": "2020-09-22",
            "count": 1
          },
          {
            "date": "2020-10-03",
            "count": 1
          },
          {
            "date": "2020-10-05",
            "count": 1
          },
          {
            "date": "2020-10-10",
            "count": 1
          },
          {
            "date": "2020-10-11",
            "count": 1
          },
          {
            "date": "2020-10-22",
            "count": 1
          },
          {
            "date": "2020-10-23",
            "count": 1
          },
          {
            "date": "2020-10-29",
            "count": 1
          },
          {
            "date": "2020-11-09",
            "count": 1
          },
          {
            "date": "2020-11-19",
            "count": 1
          },
          {
            "date": "2020-11-28",
            "count": 1
          },
          {
            "date": "2020-12-25",
            "count": 1
          },
          {
            "date": "2020-12-27",
            "count": 1
          },
          {
            "date": "2021-01-03",
            "count": 1
          },
          {
            "date": "2021-01-12",
            "count": 1
          },
          {
            "date": "2021-01-31",
            "count": 1
          },
          {
            "date": "2021-02-04",
            "count": 1
          },
          {
            "date": "2021-02-06",
            "count": 1
          },
          {
            "date": "2021-02-10",
            "count": 1
          },
          {
            "date": "2021-02-11",
            "count": 1
          },
          {
            "date": "2021-02-21",
            "count": 1
          },
          {
            "date": "2021-03-12",
            "count": 1
          },
          {
            "date": "2021-03-15",
            "count": 1
          },
          {
            "date": "2021-03-16",
            "count": 1
          },
          {
            "date": "2021-03-19",
            "count": 1
          },
          {
            "date": "2021-03-27",
            "count": 1
          },
          {
            "date": "2021-04-07",
            "count": 1
          },
          {
            "date": "2021-04-29",
            "count": 1
          },
          {
            "date": "2021-05-14",
            "count": 1
          },
          {
            "date": "2021-06-29",
            "count": 1
          },
          {
            "date": "2021-07-01",
            "count": 1
          },
          {
            "date": "2021-07-18",
            "count": 1
          },
          {
            "date": "2021-07-26",
            "count": 1
          },
          {
            "date": "2021-08-02",
            "count": 1
          },
          {
            "date": "2021-08-11",
            "count": 1
          },
          {
            "date": "2021-08-20",
            "count": 1
          },
          {
            "date": "2021-09-17",
            "count": 1
          },
          {
            "date": "2021-09-20",
            "count": 1
          },
          {
            "date": "2021-10-01",
            "count": 1
          },
          {
            "date": "2021-10-10",
            "count": 1
          },
          {
            "date": "2021-10-11",
            "count": 1
          },
          {
            "date": "2021-10-12",
            "count": 2
          },
          {
            "date": "2021-10-15",
            "count": 1
          },
          {
            "date": "2021-10-17",
            "count": 1
          },
          {
            "date": "2021-10-18",
            "count": 1
          },
          {
            "date": "2021-10-24",
            "count": 1
          },
          {
            "date": "2021-11-10",
            "count": 1
          },
          {
            "date": "2021-11-11",
            "count": 1
          },
          {
            "date": "2021-11-12",
            "count": 1
          },
          {
            "date": "2021-11-21",
            "count": 1
          },
          {
            "date": "2021-11-23",
            "count": 1
          },
          {
            "date": "2021-11-27",
            "count": 1
          },
          {
            "date": "2021-11-29",
            "count": 2
          },
          {
            "date": "2021-12-16",
            "count": 1
          },
          {
            "date": "2021-12-17",
            "count": 1
          },
          {
            "date": "2021-12-28",
            "count": 1
          },
          {
            "date": "2022-01-03",
            "count": 1
          },
          {
            "date": "2022-01-08",
            "count": 1
          },
          {
            "date": "2022-01-18",
            "count": 2
          },
          {
            "date": "2022-02-03",
            "count": 1
          },
          {
            "date": "2022-03-25",
            "count": 1
          },
          {
            "date": "2022-04-03",
            "count": 1
          },
          {
            "date": "2022-04-10",
            "count": 1
          },
          {
            "date": "2022-04-11",
            "count": 1
          },
          {
            "date": "2022-04-12",
            "count": 1
          },
          {
            "date": "2022-04-18",
            "count": 1
          },
          {
            "date": "2022-05-04",
            "count": 1
          },
          {
            "date": "2022-05-26",
            "count": 1
          },
          {
            "date": "2022-06-01",
            "count": 1
          },
          {
            "date": "2022-07-08",
            "count": 1
          },
          {
            "date": "2022-08-03",
            "count": 1
          },
          {
            "date": "2022-08-13",
            "count": 1
          },
          {
            "date": "2022-08-27",
            "count": 1
          },
          {
            "date": "2022-09-07",
            "count": 2
          },
          {
            "date": "2022-09-08",
            "count": 1
          },
          {
            "date": "2022-09-14",
            "count": 1
          },
          {
            "date": "2022-09-26",
            "count": 1
          },
          {
            "date": "2022-10-09",
            "count": 1
          },
          {
            "date": "2022-10-19",
            "count": 1
          },
          {
            "date": "2022-10-20",
            "count": 1
          },
          {
            "date": "2022-10-21",
            "count": 1
          },
          {
            "date": "2022-11-11",
            "count": 1
          },
          {
            "date": "2022-11-20",
            "count": 1
          },
          {
            "date": "2022-11-22",
            "count": 1
          },
          {
            "date": "2022-11-30",
            "count": 1
          },
          {
            "date": "2022-12-24",
            "count": 1
          },
          {
            "date": "2023-01-03",
            "count": 1
          },
          {
            "date": "2023-01-09",
            "count": 1
          },
          {
            "date": "2023-01-12",
            "count": 1
          },
          {
            "date": "2023-01-22",
            "count": 1
          },
          {
            "date": "2023-02-27",
            "count": 1
          },
          {
            "date": "2023-03-14",
            "count": 1
          },
          {
            "date": "2023-03-23",
            "count": 1
          },
          {
            "date": "2023-03-30",
            "count": 1
          },
          {
            "date": "2023-04-04",
            "count": 1
          },
          {
            "date": "2023-04-07",
            "count": 1
          },
          {
            "date": "2023-04-11",
            "count": 1
          },
          {
            "date": "2023-05-17",
            "count": 1
          },
          {
            "date": "2023-05-22",
            "count": 1
          },
          {
            "date": "2023-05-30",
            "count": 1
          },
          {
            "date": "2023-06-25",
            "count": 1
          },
          {
            "date": "2023-07-18",
            "count": 1
          },
          {
            "date": "2023-08-28",
            "count": 1
          },
          {
            "date": "2023-09-05",
            "count": 1
          },
          {
            "date": "2023-09-12",
            "count": 1
          },
          {
            "date": "2023-09-28",
            "count": 1
          },
          {
            "date": "2023-10-06",
            "count": 1
          },
          {
            "date": "2023-10-13",
            "count": 1
          },
          {
            "date": "2023-10-20",
            "count": 1
          },
          {
            "date": "2023-11-08",
            "count": 1
          },
          {
            "date": "2023-11-24",
            "count": 1
          },
          {
            "date": "2023-12-05",
            "count": 1
          },
          {
            "date": "2023-12-15",
            "count": 2
          },
          {
            "date": "2023-12-20",
            "count": 1
          },
          {
            "date": "2023-12-30",
            "count": 1
          },
          {
            "date": "2024-01-12",
            "count": 1
          },
          {
            "date": "2024-01-30",
            "count": 1
          },
          {
            "date": "2024-02-08",
            "count": 1
          },
          {
            "date": "2024-02-12",
            "count": 1
          },
          {
            "date": "2024-02-18",
            "count": 1
          },
          {
            "date": "2024-02-26",
            "count": 1
          },
          {
            "date": "2024-03-20",
            "count": 1
          },
          {
            "date": "2024-03-24",
            "count": 1
          },
          {
            "date": "2024-03-30",
            "count": 1
          },
          {
            "date": "2024-04-03",
            "count": 1
          },
          {
            "date": "2024-04-26",
            "count": 1
          },
          {
            "date": "2024-05-15",
            "count": 1
          },
          {
            "date": "2024-06-16",
            "count": 1
          },
          {
            "date": "2024-06-18",
            "count": 1
          },
          {
            "date": "2024-07-06",
            "count": 1
          },
          {
            "date": "2024-07-10",
            "count": 1
          },
          {
            "date": "2024-07-11",
            "count": 1
          },
          {
            "date": "2024-07-12",
            "count": 1
          },
          {
            "date": "2024-07-13",
            "count": 1
          },
          {
            "date": "2024-07-16",
            "count": 1
          },
          {
            "date": "2024-08-18",
            "count": 1
          },
          {
            "date": "2024-09-09",
            "count": 1
          },
          {
            "date": "2024-09-11",
            "count": 1
          },
          {
            "date": "2024-09-25",
            "count": 1
          },
          {
            "date": "2024-09-28",
            "count": 1
          },
          {
            "date": "2024-09-29",
            "count": 1
          },
          {
            "date": "2024-10-10",
            "count": 1
          },
          {
            "date": "2024-11-07",
            "count": 1
          },
          {
            "date": "2024-12-05",
            "count": 1
          },
          {
            "date": "2024-12-07",
            "count": 1
          },
          {
            "date": "2025-02-01",
            "count": 1
          },
          {
            "date": "2025-02-21",
            "count": 1
          },
          {
            "date": "2025-02-27",
            "count": 1
          },
          {
            "date": "2025-03-10",
            "count": 1
          },
          {
            "date": "2025-03-11",
            "count": 1
          },
          {
            "date": "2025-03-18",
            "count": 1
          },
          {
            "date": "2025-03-21",
            "count": 1
          },
          {
            "date": "2025-04-01",
            "count": 1
          },
          {
            "date": "2025-05-07",
            "count": 1
          },
          {
            "date": "2025-05-27",
            "count": 1
          },
          {
            "date": "2025-07-10",
            "count": 1
          },
          {
            "date": "2025-07-16",
            "count": 1
          },
          {
            "date": "2025-07-22",
            "count": 1
          },
          {
            "date": "2025-08-17",
            "count": 1
          },
          {
            "date": "2025-08-19",
            "count": 1
          },
          {
            "date": "2025-08-25",
            "count": 1
          },
          {
            "date": "2025-08-29",
            "count": 1
          },
          {
            "date": "2025-09-21",
            "count": 1
          },
          {
            "date": "2025-09-30",
            "count": 1
          },
          {
            "date": "2025-10-05",
            "count": 1
          },
          {
            "date": "2025-10-26",
            "count": 1
          },
          {
            "date": "2025-11-02",
            "count": 2
          },
          {
            "date": "2025-11-05",
            "count": 1
          },
          {
            "date": "2025-11-21",
            "count": 1
          },
          {
            "date": "2025-11-25",
            "count": 1
          },
          {
            "date": "2025-11-26",
            "count": 5
          },
          {
            "date": "2025-12-31",
            "count": 1
          },
          {
            "date": "2026-04-24",
            "count": 1
          },
          {
            "date": "2026-05-12",
            "count": 1
          },
          {
            "date": "2026-07-07",
            "count": 1
          }
        ],
        "complete": true,
        "collected": 643,
        "total_stars": 644
      },
      "open_issues_and_prs": 20
    },
    "ai_readiness": {
      "has_nix": false,
      "example_dirs": [
        "examples",
        "notebooks"
      ],
      "has_llms_txt": false,
      "has_dockerfile": false,
      "has_mcp_signal": false,
      "bootstrap_files": [
        "abstracts/bosc_2015_bcbio_prioritization/Makefile",
        "abstracts/bosc_2016_bcbio_cwl/Makefile",
        "abstracts/bosc_2017_bcbio_integration/Makefile",
        "abstracts/bosc_2018_bcbio_validation/Makefile",
        "abstracts/hackathon_workshop_2017/Makefile",
        "nextgen/docs/Makefile",
        "papers/bcbio-nextgen/Makefile"
      ],
      "api_schema_files": [],
      "has_devcontainer": false,
      "typecheck_configs": [],
      "toolchain_manifests": [],
      "largest_source_bytes": 70319,
      "source_files_sampled": 186,
      "oversized_source_files": 1,
      "agent_instruction_files": [],
      "agent_instruction_max_bytes": null
    },
    "dependencies": {
      "manifests": [
        "distblast/setup.py",
        "gff/setup.py"
      ],
      "advisories": {
        "error": null,
        "scope": "published_package",
        "source": "osv",
        "findings": [],
        "collected": true,
        "malicious": [],
        "truncated": false,
        "by_severity": {},
        "advisory_count": 0,
        "affected_count": 0,
        "assessed_count": 3,
        "malicious_count": 0,
        "assessed_package": "pypi:bcbio-gff@0.7.1",
        "unassessed_count": 0,
        "direct_affected_count": 0
      },
      "ecosystems": [
        "pypi"
      ],
      "dependencies": [],
      "all_dependencies": {
        "error": null,
        "source": "github-sbom",
        "packages": [
          {
            "name": "biopython",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pyyaml",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "six",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          }
        ],
        "collected": true,
        "truncated": false,
        "total_count": 3,
        "direct_count": 0,
        "indirect_count": 3
      }
    },
    "maintainership": {
      "issues": {
        "open_prs": 2,
        "merged_prs": 46,
        "open_issues": 18,
        "closed_ratio": 0.775,
        "closed_issues": 62,
        "closed_unmerged_prs": 21
      },
      "bus_factor": 1,
      "bot_contributors": 0,
      "top_contributors": [
        {
          "type": "User",
          "login": "chapmanb",
          "commits": 1217,
          "avatar_url": "https://avatars.githubusercontent.com/u/39391?v=4"
        },
        {
          "type": "User",
          "login": "brainstorm",
          "commits": 45,
          "avatar_url": "https://avatars.githubusercontent.com/u/175587?v=4"
        },
        {
          "type": "User",
          "login": "roryk",
          "commits": 43,
          "avatar_url": "https://avatars.githubusercontent.com/u/414586?v=4"
        },
        {
          "type": "User",
          "login": "vals",
          "commits": 7,
          "avatar_url": "https://avatars.githubusercontent.com/u/668803?v=4"
        },
        {
          "type": "User",
          "login": "peterjc",
          "commits": 6,
          "avatar_url": "https://avatars.githubusercontent.com/u/63959?v=4"
        },
        {
          "type": "User",
          "login": "khughitt",
          "commits": 4,
          "avatar_url": "https://avatars.githubusercontent.com/u/125001?v=4"
        },
        {
          "type": "User",
          "login": "mspinelli",
          "commits": 3,
          "avatar_url": "https://avatars.githubusercontent.com/u/651748?v=4"
        },
        {
          "type": "User",
          "login": "hsiaoyi0504",
          "commits": 2,
          "avatar_url": "https://avatars.githubusercontent.com/u/10943928?v=4"
        },
        {
          "type": "User",
          "login": "tipabu",
          "commits": 2,
          "avatar_url": "https://avatars.githubusercontent.com/u/4432952?v=4"
        },
        {
          "type": "User",
          "login": "jwm",
          "commits": 2,
          "avatar_url": "https://avatars.githubusercontent.com/u/37176?v=4"
        }
      ],
      "contributors_sampled": 25,
      "top_contributor_share": 0.904
    },
    "quality_signals": {
      "has_ci": false,
      "has_tests": true,
      "ci_workflows": [],
      "has_docs_dir": false,
      "linter_configs": [],
      "has_editorconfig": false,
      "has_linter_config": false,
      "has_precommit_config": false
    },
    "security_signals": {
      "lockfiles": [],
      "scorecard": {
        "checks": [
          {
            "name": "Binary-Artifacts",
            "score": 10,
            "reason": "no binaries found in the repo",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#binary-artifacts"
          },
          {
            "name": "Branch-Protection",
            "score": 0,
            "reason": "branch protection not enabled on development/release branches",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#branch-protection"
          },
          {
            "name": "CI-Tests",
            "score": 0,
            "reason": "0 out of 9 merged PRs checked by a CI test -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#ci-tests"
          },
          {
            "name": "CII-Best-Practices",
            "score": 0,
            "reason": "no effort to earn an OpenSSF best practices badge detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#cii-best-practices"
          },
          {
            "name": "Code-Review",
            "score": 4,
            "reason": "Found 9/20 approved changesets -- score normalized to 4",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#code-review"
          },
          {
            "name": "Contributors",
            "score": 10,
            "reason": "project has 25 contributing companies or organizations",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#contributors"
          },
          {
            "name": "Dangerous-Workflow",
            "score": null,
            "reason": "no workflows found",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dangerous-workflow"
          },
          {
            "name": "Dependency-Update-Tool",
            "score": 0,
            "reason": "no update tool detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dependency-update-tool"
          },
          {
            "name": "Fuzzing",
            "score": 0,
            "reason": "project is not fuzzed",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#fuzzing"
          },
          {
            "name": "License",
            "score": 0,
            "reason": "license file not detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#license"
          },
          {
            "name": "Maintained",
            "score": 0,
            "reason": "0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#maintained"
          },
          {
            "name": "Packaging",
            "score": null,
            "reason": "packaging workflow not detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#packaging"
          },
          {
            "name": "Pinned-Dependencies",
            "score": null,
            "reason": "no dependencies found",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#pinned-dependencies"
          },
          {
            "name": "SAST",
            "score": 0,
            "reason": "SAST tool is not run on all commits -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#sast"
          },
          {
            "name": "Security-Policy",
            "score": 0,
            "reason": "security policy file not detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#security-policy"
          },
          {
            "name": "Signed-Releases",
            "score": null,
            "reason": "no releases found",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#signed-releases"
          },
          {
            "name": "Token-Permissions",
            "score": null,
            "reason": "No tokens found",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#token-permissions"
          },
          {
            "name": "Vulnerabilities",
            "score": 10,
            "reason": "0 existing vulnerabilities detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#vulnerabilities"
          }
        ],
        "commit": "320353c64ee0dc938113ca36f19b2e6de6b597be",
        "ran_at": "2026-07-21T23:47:57Z",
        "aggregate_score": 2.9,
        "scorecard_version": "v5.5.0"
      },
      "has_codeql_workflow": false,
      "has_security_policy": false,
      "has_dependabot_config": false
    },
    "contribution_flow": {
      "collected": true,
      "ci_last_run_at": null,
      "oldest_open_prs": [
        {
          "number": 146,
          "created_at": "2024-11-05T21:58:40Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 149,
          "created_at": "2026-05-23T13:40:15Z",
          "last_comment_at": null,
          "last_comment_author": null
        }
      ],
      "last_merged_pr_at": "2025-02-05T14:20:51Z",
      "ci_last_conclusion": null,
      "oldest_open_issues": [
        {
          "number": 86,
          "created_at": "2014-04-18T22:41:23Z",
          "last_comment_at": "2014-05-15T09:57:18Z",
          "last_comment_author": "chapmanb"
        },
        {
          "number": 95,
          "created_at": "2015-01-14T21:31:09Z",
          "last_comment_at": "2015-06-18T16:45:52Z",
          "last_comment_author": "bgruening"
        },
        {
          "number": 99,
          "created_at": "2015-05-29T15:42:40Z",
          "last_comment_at": "2016-06-01T05:10:41Z",
          "last_comment_author": "Swati6783"
        },
        {
          "number": 102,
          "created_at": "2015-10-26T13:03:40Z",
          "last_comment_at": "2015-11-17T17:18:09Z",
          "last_comment_author": "timflutre"
        },
        {
          "number": 105,
          "created_at": "2015-12-09T21:13:21Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 108,
          "created_at": "2016-02-09T08:29:57Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 109,
          "created_at": "2016-05-26T18:48:43Z",
          "last_comment_at": "2016-05-30T15:42:19Z",
          "last_comment_author": "hexylena"
        },
        {
          "number": 111,
          "created_at": "2016-09-21T14:17:46Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 115,
          "created_at": "2018-03-15T08:25:04Z",
          "last_comment_at": "2018-03-15T09:58:24Z",
          "last_comment_author": "chapmanb"
        },
        {
          "number": 118,
          "created_at": "2018-07-10T12:32:14Z",
          "last_comment_at": "2018-07-12T15:13:51Z",
          "last_comment_author": "fbeghini"
        },
        {
          "number": 128,
          "created_at": "2019-12-05T15:36:29Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 131,
          "created_at": "2020-09-18T12:19:15Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 132,
          "created_at": "2020-09-18T12:23:49Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 136,
          "created_at": "2023-02-13T13:09:03Z",
          "last_comment_at": "2024-02-01T18:34:42Z",
          "last_comment_author": "corneliusroemer"
        },
        {
          "number": 142,
          "created_at": "2024-01-29T19:13:14Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 143,
          "created_at": "2024-01-29T19:48:46Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 144,
          "created_at": "2024-03-28T11:07:35Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 148,
          "created_at": "2026-02-17T15:54:19Z",
          "last_comment_at": null,
          "last_comment_author": null
        }
      ]
    }
  },
  "config": {
    "disabled_metrics": [],
    "disabled_categories": [],
    "disabled_components": {}
  },
  "source": {
    "url": "https://github.com/chapmanb/bcbb",
    "host": "github.com",
    "name": "bcbb",
    "owner": "chapmanb"
  },
  "metrics": {
    "overall": {
      "key": "overall",
      "band": "at_risk",
      "name": "Overall health",
      "note": "Abandonment Policy applies a 85% multiplier to weighted overall health.",
      "notes": [
        {
          "code": "abandonment_overall_adjustment",
          "params": {
            "cap": 0,
            "pct": 85
          }
        }
      ],
      "value": 34,
      "inputs": {
        "security": 43,
        "vitality": 10,
        "community": 52,
        "governance": 59,
        "engineering": 36,
        "abandonment_cap": null,
        "abandonment_state": "at_risk",
        "abandonment_multiplier": 85,
        "weighted_overall_before_abandonment": 40,
        "overall_after_abandonment_multiplier": 34
      },
      "components": []
    },
    "categories": [
      {
        "key": "vitality",
        "band": "critical",
        "name": "Vitality",
        "value": 10,
        "weight": 0.22,
        "metrics": [
          {
            "key": "development_activity",
            "band": "critical",
            "name": "Development activity",
            "note": null,
            "notes": [],
            "value": 1,
            "inputs": {
              "commits_last_year": 0,
              "human_commit_share": 1,
              "days_since_last_push": 531,
              "active_weeks_last_year": 0
            },
            "components": [
              {
                "key": "push_recency",
                "name": "Push recency",
                "detail": "last push 531 days ago",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "push_recency",
                    "params": {
                      "days": 531
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_cadence",
                "name": "Commit cadence",
                "detail": "0/52 weeks with commits",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "commit_cadence_weeks",
                    "params": {
                      "weeks": 0
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_volume",
                "name": "Commit volume",
                "detail": "0 commits in the last year",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "commits_last_year",
                    "params": {
                      "count": 0
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "openssf_scorecard_maintained",
                "name": "OpenSSF Scorecard: Maintained",
                "detail": "0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "release_discipline",
            "band": "critical",
            "name": "Release discipline",
            "note": "Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Signed-Releases. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "openssf_scorecard_signed_releases"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 24,
            "inputs": {
              "releases_count": 2,
              "latest_release_tag": "v0.6.7",
              "releases_from_tags": true,
              "days_since_latest_release": 1749,
              "mean_days_between_releases": 3164.1
            },
            "components": [
              {
                "key": "ships_releases",
                "name": "Ships releases",
                "detail": "2 version tags (no GitHub releases)",
                "points": 16.2,
                "status": "partial",
                "details": [
                  {
                    "code": "version_tags_no_releases",
                    "params": {
                      "count": 2
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "release_recency",
                "name": "Release recency",
                "detail": "latest release 1749 days ago",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "release_recency",
                    "params": {
                      "days": 1749
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "release_cadence",
                "name": "Release cadence",
                "detail": "a release every ~3164.1 days",
                "points": 5.4,
                "status": "partial",
                "details": [
                  {
                    "code": "release_cadence",
                    "params": {
                      "gap": 3164.1
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "openssf_scorecard_signed_releases",
                "name": "OpenSSF Scorecard: Signed-Releases",
                "detail": "no releases found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              }
            ]
          },
          {
            "key": "abandonment",
            "band": "excellent",
            "name": "Abandonment",
            "note": null,
            "notes": [],
            "value": 85,
            "inputs": {
              "cap": null,
              "state": "at_risk",
              "guards": [
                "dependencies_clean"
              ],
              "signals": [
                "issue_rot",
                "scorecard_unmaintained"
              ],
              "red_flag": true,
              "multiplier_pct": 85,
              "declared_reason": null,
              "unverified_reason": null,
              "unanswered_open_prs": 1,
              "unanswered_open_issues": 15,
              "days_since_last_merged_pr": 531,
              "days_since_last_human_commit": 531,
              "days_since_last_human_commit_is_floor": false
            },
            "components": [
              {
                "key": "project_is_still_maintained",
                "name": "Project is still maintained",
                "detail": "no human commit for 531 days; 2 unmet obligation(s): issues unanswered, Scorecard reports it unmaintained",
                "points": 85,
                "status": "partial",
                "details": [
                  {
                    "code": "abandonment_flagged",
                    "params": {
                      "days": 531,
                      "count": 2,
                      "signals": "issues unanswered, Scorecard reports it unmaintained"
                    }
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Is the project alive — is code being written and are releases shipping?"
      },
      {
        "key": "community",
        "band": "moderate",
        "name": "Community & Adoption",
        "value": 52,
        "weight": 0.18,
        "metrics": [
          {
            "key": "popularity",
            "band": "good",
            "name": "Popularity & adoption",
            "note": null,
            "notes": [],
            "value": 75,
            "inputs": {
              "forks": 241,
              "stars": 644,
              "watchers": 55,
              "growth_state": "organic",
              "growth_factor_pct": 100
            },
            "components": [
              {
                "key": "stars",
                "name": "Stars",
                "detail": "644 stars",
                "points": 45.6,
                "status": "partial",
                "details": [
                  {
                    "code": "stars",
                    "params": {
                      "count": 644
                    }
                  }
                ],
                "max_points": 60
              },
              {
                "key": "forks",
                "name": "Forks",
                "detail": "241 forks",
                "points": 19.8,
                "status": "partial",
                "details": [
                  {
                    "code": "forks",
                    "params": {
                      "count": 241
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "watchers",
                "name": "Watchers",
                "detail": "55 watchers",
                "points": 9.6,
                "status": "partial",
                "details": [
                  {
                    "code": "watchers",
                    "params": {
                      "count": 55
                    }
                  }
                ],
                "max_points": 15
              }
            ]
          },
          {
            "key": "community_health",
            "band": "critical",
            "name": "Community health",
            "note": null,
            "notes": [],
            "value": 25,
            "inputs": {
              "has_readme": true,
              "has_license": false,
              "has_contributing": false,
              "has_issue_template": false,
              "has_code_of_conduct": false,
              "has_pull_request_template": false
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 22.5,
                "status": "met",
                "details": [],
                "max_points": 22.5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "no license file detected",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "license_absent",
                    "params": {}
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributing_guide",
                "name": "CONTRIBUTING guide",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 18
              },
              {
                "key": "code_of_conduct",
                "name": "Code of conduct",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 13.5
              },
              {
                "key": "issue_template",
                "name": "Issue template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.2
              },
              {
                "key": "pr_template",
                "name": "PR template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.3
              }
            ]
          }
        ],
        "description": "Does the project have users, downloads, attention, and a welcoming setup for contributors?"
      },
      {
        "key": "governance",
        "band": "moderate",
        "name": "Sustainability & Governance",
        "value": 59,
        "weight": 0.24,
        "metrics": [
          {
            "key": "maintainer_resilience",
            "band": "at_risk",
            "name": "Maintainer resilience (bus factor)",
            "note": null,
            "notes": [],
            "value": 35,
            "inputs": {
              "bus_factor": 1,
              "contributors_sampled": 25,
              "top_contributor_share": 0.904
            },
            "components": [
              {
                "key": "bus_factor",
                "name": "Bus factor",
                "detail": "1 contributor(s) cover half of all commits",
                "points": 9,
                "status": "partial",
                "details": [
                  {
                    "code": "bus_factor",
                    "params": {
                      "count": 1
                    }
                  }
                ],
                "max_points": 54
              },
              {
                "key": "commit_distribution",
                "name": "Commit distribution",
                "detail": "top contributor authored 90% of commits",
                "points": 2.2,
                "status": "partial",
                "details": [
                  {
                    "code": "top_contributor_share",
                    "params": {
                      "share": 90
                    }
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributor_breadth",
                "name": "Contributor breadth",
                "detail": "25 contributors",
                "points": 13.5,
                "status": "met",
                "details": [
                  {
                    "code": "contributors_sampled",
                    "params": {
                      "count": 25
                    }
                  }
                ],
                "max_points": 13.5
              },
              {
                "key": "openssf_scorecard_contributors",
                "name": "OpenSSF Scorecard: Contributors",
                "detail": "project has 25 contributing companies or organizations",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "responsiveness",
            "band": "moderate",
            "name": "Issue & PR responsiveness",
            "note": null,
            "notes": [],
            "value": 68,
            "inputs": {
              "merged_prs": 46,
              "open_issues": 18,
              "closed_issues": 62,
              "issue_closed_ratio": 0.775,
              "closed_unmerged_prs": 21
            },
            "components": [
              {
                "key": "issue_resolution",
                "name": "Issue resolution",
                "detail": "78% of issues closed",
                "points": 36.2,
                "status": "partial",
                "details": [
                  {
                    "code": "issues_closed_share",
                    "params": {
                      "share": 78
                    }
                  }
                ],
                "max_points": 46.75
              },
              {
                "key": "pr_acceptance",
                "name": "PR acceptance",
                "detail": "46/67 decided PRs merged",
                "points": 26.3,
                "status": "partial",
                "details": [
                  {
                    "code": "decided_prs_merged",
                    "params": {
                      "merged": 46,
                      "decided": 67
                    }
                  }
                ],
                "max_points": 38.25
              },
              {
                "key": "openssf_scorecard_code_review",
                "name": "OpenSSF Scorecard: Code-Review",
                "detail": "Found 9/20 approved changesets -- score normalized to 4",
                "points": 6,
                "status": "partial",
                "details": [],
                "max_points": 15
              }
            ]
          },
          {
            "key": "stewardship",
            "band": "good",
            "name": "Ownership & stewardship",
            "note": "Excluded from scoring (no data or not applicable): Verified domain. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "verified_domain"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 71,
            "inputs": {
              "followers": 982,
              "owner_type": "User",
              "is_verified": null,
              "owner_login": "chapmanb",
              "public_repos": 121,
              "account_age_days": 6433
            },
            "components": [
              {
                "key": "ownership_backing",
                "name": "Ownership backing",
                "detail": "personal (user) account",
                "points": 10,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_personal",
                    "params": {}
                  }
                ],
                "max_points": 30
              },
              {
                "key": "verified_domain",
                "name": "Verified domain",
                "detail": "not applicable to user accounts",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "not_applicable_to_user_accounts",
                    "params": {}
                  }
                ],
                "max_points": 20
              },
              {
                "key": "owner_reach",
                "name": "Owner reach",
                "detail": "982 followers of chapmanb",
                "points": 21.5,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_followers",
                    "params": {
                      "count": 982,
                      "login": "chapmanb"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "track_record",
                "name": "Track record",
                "detail": "121 public repos, account ~17 yr old",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "public_repos",
                    "params": {
                      "count": 121
                    }
                  },
                  {
                    "code": "account_age_years",
                    "params": {
                      "years": 17
                    }
                  }
                ],
                "max_points": 25
              }
            ]
          },
          {
            "key": "package_maintenance",
            "band": "moderate",
            "name": "Package maintenance",
            "note": null,
            "notes": [],
            "value": 69,
            "inputs": {
              "packages": [
                "bcbio-gff"
              ],
              "ecosystems": "pypi",
              "any_deprecated": false,
              "min_days_since_publish": 904
            },
            "components": [
              {
                "key": "published_resolvable",
                "name": "Published & resolvable",
                "detail": "1 package(s) on pypi",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "packages_published",
                    "params": {
                      "count": 1,
                      "ecosystems": "pypi"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "publish_recency",
                "name": "Publish recency",
                "detail": "latest publish 904 days ago",
                "points": 4,
                "status": "partial",
                "details": [
                  {
                    "code": "publish_recency",
                    "params": {
                      "days": 904
                    }
                  }
                ],
                "max_points": 35
              },
              {
                "key": "version_history",
                "name": "Version history",
                "detail": "15 published versions",
                "points": 20,
                "status": "met",
                "details": [
                  {
                    "code": "published_versions",
                    "params": {
                      "count": 15
                    }
                  }
                ],
                "max_points": 20
              },
              {
                "key": "not_deprecated",
                "name": "Not deprecated",
                "detail": "active, not deprecated or yanked",
                "points": 20,
                "status": "met",
                "details": [
                  {
                    "code": "package_not_deprecated",
                    "params": {}
                  }
                ],
                "max_points": 20
              }
            ]
          }
        ],
        "description": "Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?"
      },
      {
        "key": "engineering",
        "band": "at_risk",
        "name": "Engineering Quality",
        "value": 36,
        "weight": 0.2,
        "metrics": [
          {
            "key": "engineering_practices",
            "band": "critical",
            "name": "Engineering practices",
            "note": null,
            "notes": [],
            "value": 24,
            "inputs": {
              "has_ci": false,
              "has_tests": true,
              "has_editorconfig": false,
              "has_linter_config": false,
              "has_precommit_config": false
            },
            "components": [
              {
                "key": "ci_workflows",
                "name": "CI workflows",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 24
              },
              {
                "key": "tests_present",
                "name": "Tests present",
                "detail": null,
                "points": 24,
                "status": "met",
                "details": [],
                "max_points": 24
              },
              {
                "key": "linter_config",
                "name": "Linter config",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 16
              },
              {
                "key": "pre_commit_hooks",
                "name": "Pre-commit hooks",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 9.6
              },
              {
                "key": "editorconfig",
                "name": ".editorconfig",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.4
              },
              {
                "key": "openssf_scorecard_ci_tests",
                "name": "OpenSSF Scorecard: CI-Tests",
                "detail": "0 out of 9 merged PRs checked by a CI test -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              }
            ]
          },
          {
            "key": "documentation",
            "band": "moderate",
            "name": "Documentation",
            "note": null,
            "notes": [],
            "value": 55,
            "inputs": {
              "topics": [],
              "has_wiki": false,
              "homepage": "http://bcbio.wordpress.com",
              "has_readme": true,
              "has_docs_dir": false,
              "has_description": true
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 30,
                "status": "met",
                "details": [],
                "max_points": 30
              },
              {
                "key": "documentation_directory",
                "name": "Documentation directory",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 25
              },
              {
                "key": "documentation_homepage_site",
                "name": "Documentation / homepage site",
                "detail": "http://bcbio.wordpress.com",
                "points": 15,
                "status": "met",
                "details": [],
                "max_points": 15
              },
              {
                "key": "repository_description",
                "name": "Repository description",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "topics",
                "name": "Topics",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              },
              {
                "key": "wiki",
                "name": "Wiki",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          }
        ],
        "description": "Are baseline engineering and documentation practices in place?"
      },
      {
        "key": "security",
        "band": "at_risk",
        "name": "Security",
        "value": 43,
        "weight": 0.16,
        "metrics": [
          {
            "key": "security_posture",
            "band": "critical",
            "name": "Security posture",
            "note": "Excluded from scoring (no data or not applicable): Dangerous-Workflow, Packaging, Pinned-Dependencies, Signed-Releases, Token-Permissions. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "dangerous_workflow",
                    "packaging",
                    "pinned_dependencies",
                    "signed_releases",
                    "token_permissions"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 29,
            "inputs": {
              "source": "openssf_scorecard",
              "checks_evaluated": 13,
              "scorecard_version": "v5.5.0",
              "checks_inconclusive": 5,
              "scorecard_aggregate": 2.9
            },
            "components": [
              {
                "key": "binary_artifacts",
                "name": "Binary-Artifacts",
                "detail": "no binaries found in the repo",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "branch_protection",
                "name": "Branch-Protection",
                "detail": "branch protection not enabled on development/release branches",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "ci_tests",
                "name": "CI-Tests",
                "detail": "0 out of 9 merged PRs checked by a CI test -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "cii_best_practices",
                "name": "CII-Best-Practices",
                "detail": "no effort to earn an OpenSSF best practices badge detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "code_review",
                "name": "Code-Review",
                "detail": "Found 9/20 approved changesets -- score normalized to 4",
                "points": 3,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "contributors",
                "name": "Contributors",
                "detail": "project has 25 contributing companies or organizations",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "dangerous_workflow",
                "name": "Dangerous-Workflow",
                "detail": "no workflows found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              },
              {
                "key": "dependency_update_tool",
                "name": "Dependency-Update-Tool",
                "detail": "no update tool detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "fuzzing",
                "name": "Fuzzing",
                "detail": "project is not fuzzed",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "license file not detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "maintained",
                "name": "Maintained",
                "detail": "0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "packaging",
                "name": "Packaging",
                "detail": "packaging workflow not detected",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 5
              },
              {
                "key": "pinned_dependencies",
                "name": "Pinned-Dependencies",
                "detail": "no dependencies found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 5
              },
              {
                "key": "sast",
                "name": "SAST",
                "detail": "SAST tool is not run on all commits -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "security_policy",
                "name": "Security-Policy",
                "detail": "security policy file not detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "signed_releases",
                "name": "Signed-Releases",
                "detail": "no releases found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "token_permissions",
                "name": "Token-Permissions",
                "detail": "No tokens found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "vulnerabilities",
                "name": "Vulnerabilities",
                "detail": "0 existing vulnerabilities detected",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              }
            ]
          },
          {
            "key": "dependency_advisories",
            "band": "excellent",
            "name": "Dependency advisories",
            "note": "Excluded from scoring (no data or not applicable): No advisories left outstanding. Remaining weights renormalized. Matched the pypi:bcbio-gff@0.7.1 runtime dependency closure — what installing the published package pulls in — 3 packages. Reachability is not analyzed.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "no_advisories_left_outstanding"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              },
              {
                "code": "advisories_scope_published",
                "params": {
                  "package": "pypi:bcbio-gff@0.7.1",
                  "assessed": 3
                }
              },
              {
                "code": "advisories_reachability",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "source": "osv",
              "advisories": 0,
              "affected_packages": 0,
              "assessed_packages": 3,
              "unassessed_packages": 0,
              "affected_by_severity": "none",
              "direct_affected_packages": 0
            },
            "components": [
              {
                "key": "direct_dependencies_free_of_known_advisories",
                "name": "Direct dependencies free of known advisories",
                "detail": "no direct dependency carries a known advisory",
                "points": 35,
                "status": "met",
                "details": [
                  {
                    "code": "no_direct_advisories",
                    "params": {}
                  }
                ],
                "max_points": 35
              },
              {
                "key": "indirect_dependencies_free_of_known_advisories",
                "name": "Indirect dependencies free of known advisories",
                "detail": "no indirect dependency carries a known advisory",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "no_indirect_advisories",
                    "params": {}
                  }
                ],
                "max_points": 25
              },
              {
                "key": "no_advisories_left_outstanding",
                "name": "No advisories left outstanding",
                "detail": "no advisory carries a publication date",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "advisories_no_publication_date",
                    "params": {}
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "malicious_dependencies",
            "band": "excellent",
            "name": "Malicious dependencies",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "source": "osv",
              "meaning": "reported as a malicious package by the OpenSSF corpus; the remedy is removal or moving off the compromised name, never an upgrade of the same artifact. Versions the registry has since pulled are listed but not scored",
              "packages": [],
              "red_flag": false,
              "assessed_packages": 3,
              "malicious_packages": 0,
              "direct_malicious_packages": 0,
              "withdrawn_malicious_packages": 0,
              "installable_malicious_packages": 0
            },
            "components": [
              {
                "key": "no_dependency_reported_as_a_malicious_package",
                "name": "No dependency reported as a malicious package",
                "detail": "no dependency is reported as a malicious package",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "no_malicious_dependencies",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          },
          {
            "key": "high_risk_jurisdiction_exposure",
            "band": "excellent",
            "name": "High-Risk Jurisdiction Exposure",
            "note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
            "notes": [
              {
                "code": "jurisdiction_evidence_limits",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "meaning": "self-published location evidence; not nationality or citizenship",
              "red_flag": false,
              "exposures": [],
              "policy_countries": [
                "Russia",
                "Iran",
                "North Korea"
              ],
              "review_only_matches": 0,
              "assessed_self_published_locations": 19
            },
            "components": [
              {
                "key": "policy_exposure_multiplier",
                "name": "Policy exposure multiplier",
                "detail": "no confirmed policy-scope location match",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "jurisdiction_no_match",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
      },
      {
        "key": "ai_readiness",
        "band": "at_risk",
        "name": "AI Readiness",
        "value": 37,
        "weight": 0,
        "metrics": [
          {
            "key": "ai_agent_context",
            "band": "critical",
            "name": "Agent context & guidance",
            "note": null,
            "notes": [],
            "value": 16,
            "inputs": {
              "has_llms_txt": false,
              "legible_history_share": 0.3,
              "agent_instruction_files": [],
              "agent_instruction_max_bytes": null
            },
            "components": [
              {
                "key": "agent_instructions",
                "name": "Agent instructions",
                "detail": "no CLAUDE.md / AGENTS.md / editor rules",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_instructions",
                    "params": {}
                  }
                ],
                "max_points": 45
              },
              {
                "key": "machine_readable_docs_llms_txt",
                "name": "Machine-readable docs (llms.txt)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              },
              {
                "key": "legible_commit_history",
                "name": "Legible commit history",
                "detail": "30 of 100 human commits state their intent (structured subject or explanatory body)",
                "points": 16,
                "status": "partial",
                "details": [
                  {
                    "code": "legible_history",
                    "params": {
                      "legible": 30,
                      "sampled": 100
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "ai_verify_loop",
            "band": "at_risk",
            "name": "Verify loop (build / test / typecheck)",
            "note": "Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Pinned-Dependencies. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "openssf_scorecard_pinned_dependencies"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 44,
            "inputs": {
              "has_nix": false,
              "has_tests": true,
              "lockfiles": [],
              "has_dockerfile": false,
              "typed_language": false,
              "bootstrap_files": [
                "abstracts/bosc_2015_bcbio_prioritization/Makefile",
                "abstracts/bosc_2016_bcbio_cwl/Makefile",
                "abstracts/bosc_2017_bcbio_integration/Makefile",
                "abstracts/bosc_2018_bcbio_validation/Makefile",
                "abstracts/hackathon_workshop_2017/Makefile",
                "nextgen/docs/Makefile",
                "papers/bcbio-nextgen/Makefile"
              ],
              "has_devcontainer": false,
              "has_linter_config": false,
              "typecheck_configs": [],
              "agent_commit_share": 0,
              "toolchain_manifests": [],
              "dependency_bot_commit_share": 0
            },
            "components": [
              {
                "key": "one_command_bootstrap",
                "name": "One-command bootstrap",
                "detail": "abstracts/bosc_2015_bcbio_prioritization/Makefile, abstracts/bosc_2016_bcbio_cwl/Makefile, abstracts/bosc_2017_bcbio_integration/Makefile, abstracts/bosc_2018_bcbio_validation/Makefile, abstracts/hackathon_workshop_2017/Makefile, nextgen/docs/Makefile, papers/bcbio-nextgen/Makefile",
                "points": 18,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "abstracts/bosc_2015_bcbio_prioritization/Makefile, abstracts/bosc_2016_bcbio_cwl/Makefile, abstracts/bosc_2017_bcbio_integration/Makefile, abstracts/bosc_2018_bcbio_validation/Makefile, abstracts/hackathon_workshop_2017/Makefile, nextgen/docs/Makefile, papers/bcbio-nextgen/Makefile"
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "automated_tests",
                "name": "Automated tests",
                "detail": null,
                "points": 22,
                "status": "met",
                "details": [],
                "max_points": 22
              },
              {
                "key": "lint_format_config",
                "name": "Lint / format config",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "static_type_checking",
                "name": "Static type checking",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "reproducible_environment",
                "name": "Reproducible environment",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              },
              {
                "key": "demonstrated_agent_practice",
                "name": "Demonstrated agent practice",
                "detail": "no agent-authored commits among the last 100",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_authored_commits",
                    "params": {
                      "sampled": 100
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "automated_maintenance",
                "name": "Automated maintenance",
                "detail": "no automated dependency updates observed",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_dependency_automation",
                    "params": {}
                  }
                ],
                "max_points": 8
              },
              {
                "key": "openssf_scorecard_pinned_dependencies",
                "name": "OpenSSF Scorecard: Pinned-Dependencies",
                "detail": "no dependencies found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              }
            ]
          },
          {
            "key": "ai_code_legibility",
            "band": "moderate",
            "name": "Code legibility for models",
            "note": null,
            "notes": [],
            "value": 55,
            "inputs": {
              "primary_language": "Python",
              "largest_source_bytes": 70319,
              "source_files_sampled": 186,
              "oversized_source_files": 1
            },
            "components": [
              {
                "key": "type_checkable_code",
                "name": "Type-checkable code",
                "detail": "Python without a type-check config",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_typecheck_config_language",
                    "params": {
                      "language": "Python"
                    }
                  }
                ],
                "max_points": 45
              },
              {
                "key": "manageable_file_sizes",
                "name": "Manageable file sizes",
                "detail": "1/186 source files over 60KB",
                "points": 54.7,
                "status": "partial",
                "details": [
                  {
                    "code": "oversized_source_files",
                    "params": {
                      "kb": 60,
                      "sampled": 186,
                      "oversized": 1
                    }
                  }
                ],
                "max_points": 55
              }
            ]
          },
          {
            "key": "ai_interfaces",
            "band": "at_risk",
            "name": "Machine-readable interfaces",
            "note": null,
            "notes": [],
            "value": 40,
            "inputs": {
              "example_dirs": [
                "examples",
                "notebooks"
              ],
              "has_mcp_signal": false,
              "api_schema_files": []
            },
            "components": [
              {
                "key": "api_schema_openapi_graphql_proto",
                "name": "API schema (OpenAPI/GraphQL/proto)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 40
              },
              {
                "key": "mcp_server",
                "name": "MCP server",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              },
              {
                "key": "runnable_examples",
                "name": "Runnable examples",
                "detail": "examples, notebooks",
                "points": 40,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "examples, notebooks"
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          }
        ],
        "description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
      }
    ],
    "metrics_version": "1.13.0"
  },
  "warnings": [
    "pypi package 'bcbio-phyloblast' points at a different repository (http://bcbio.wordpress.com); excluded from ecosystem scoring"
  ],
  "report_type": "repository",
  "generated_at": "2026-07-21T23:48:23.672955Z",
  "schema_version": "0.26.0",
  "badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/c/chapmanb/bcbb.svg",
  "full_name": "chapmanb/bcbb",
  "license_state": "absent",
  "license_spdx": null
}

Оцінки — це сигнали, а не гарантії. Вони відображають публічно видимі практики на GitHub — це не аудит коду й не гарантія безпеки.

Відсутні дані виключаються, а ваги перенормовуються — нуль за відсутність ніколи не ставиться. Методологія версіонована й відкрита: метрики v1.13.0, схема v0.26.0 — повна методологія · вікі метрик.

Як окремий результат виглядає на тлі всього реєстру: сукупна статистикаPyPI.