Registro público
Informe de salud del softwareesquema 0.26.0 · métricas 1.13.0 · 2026-07-21 23:48 UTC

chapmanb / bcbb

Incubator for useful bioinformatics code, primarily in Python and R

Python · HTMLSin licencia detectada★ 644 estrellas⑂ 241 forksdesde dic 2008Ver en GitHub ↗

chapmanb/bcbb tiene un índice de salud de 34 sobre 100, lo que lo sitúa en la banda En riesgo. Su puntuación más alta es Sustainability & Governance (59/100) y la más baja, Vitality (10/100). Se actualizó por última vez hace 531 días. Una sola persona concentra la mayor parte del trabajo reciente.

34
global / 100
En riesgo

Índice de salud del software

Las métricas se agrupan en categorías ponderadas sobre una escala de 1 a 100. El resultado global parte de su media; cuando la evidencia pública activa la Política de Jurisdicciones de Alto Riesgo, la calificación se ajusta y recibe el límite 49 (En riesgo). Preparación para IA queda fuera.

34
Excelente85-100Ejemplar; cumple prácticamente todos los criterios evaluados
Bueno70-84Saludable; carencias menores
Moderado50-69Aceptable con carencias notables; se recomienda revisión
En riesgo30-49Debilidades significativas; su adopción exige cautela
Crítico1-29Problemas graves (proyecto abandonado, un solo mantenedor, sin higiene)
VitalidadComunidad yAdopciónSostenibilidady GobernanzaCalidad deIngenieríaSeguridadPreparaciónpara IA

Perfil de puntuación

Cada eje es una categoría. La forma importa más que la media: un proyecto sano llena toda la figura, mientras que un perfil de picos y cráteres indica que la fortaleza en una dimensión enmascara el riesgo en otra.

Abandonment Policy applies a 85% multiplier to weighted overall health.

Titularidad

Brad ChapmanCuenta personal
982 seguidores121 repositorios públicosdesde dic 2008Ginkgo Bioworks

Este repositorio pertenece a una cuenta personal. Un proyecto con un único propietario conlleva más riesgo de continuidad que uno respaldado por una organización.

Ecosistemas de paquetes

RegistroPaqueteVersiónDescargas / mesVersionesÚltima publicación
PyPIbcbio-gff0.7.1-15hace 904 días
PyPIbcbio-phyloblastapunta a otro repositorio; no se puntúa0.1.2-3hace 4891 días

Métricas por categoría

Vitalidad

¿Está vivo el proyecto: se escribe código y se publican versiones?

10Crítico · 22% del índice global
Cómo se puntúa
0/36Recencia de push — último push hace 531 días
0/36Cadencia de commits — 0/52 semanas con commits
0/18Volumen de commits — 0 commits en el último año
0/10OpenSSF Scorecard: Maintained — 0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
Datos de entrada utilizados
commits_last_year0
human_commit_share1
days_since_last_push531
active_weeks_last_year0
Cómo se puntúa
16.2/27Publica versiones — 2 etiquetas de versión (sin releases de GitHub)
0/36Recencia de las versiones — última versión hace 1749 días
5.4/27Cadencia de publicación — una versión cada ~3164,1 días
0/10OpenSSF Scorecard: Signed-Releases — sin datos
Datos de entrada utilizados
releases_count2
latest_release_tagv0.6.7
releases_from_tags
days_since_latest_release1749
mean_days_between_releases3164,1
Excluidos de la puntuación (sin datos o no aplicable): OpenSSF Scorecard: Signed-Releases. Los pesos restantes se han renormalizado.

Comunidad y Adopción

¿Tiene el proyecto usuarios, descargas, atención y unas condiciones acogedoras para quienes contribuyen?

52Moderado · 18% del índice global
Cómo se puntúa
45.6/60Estrellas — 644 estrellas
19.8/25Forks — 241 forks
9.6/15Observadores — 55 observadores
Datos de entrada utilizados
forks241
stars644
watchers55
growth_stateorganic
growth_factor_pct100
Cómo se puntúa
22.5/22.5README
0/22.5Licencia — no se detectó ningún archivo de licencia
0/18Guía CONTRIBUTING
0/13.5Código de conducta
0/7.2Plantilla de issues
0/6.3Plantilla de PR
Datos de entrada utilizados
has_readme
has_licenseno
has_contributingno
has_issue_templateno
has_code_of_conductno
has_pull_request_templateno

Sostenibilidad y Gobernanza

¿Sobrevivirá el proyecto a sus personas: factor bus, capacidad de respuesta, quién lo respalda y mantenimiento del paquete?

59Moderado · 24% del índice global
Cómo se puntúa
9/54Factor bus — la mitad de los commits recae en 1 contribuyente(s)
2.2/22.5Distribución de commits — el principal contribuyente firma el 90% de los commits
13.5/13.5Amplitud de contribuyentes — 25 contribuyentes
10/10OpenSSF Scorecard: Contributors — project has 25 contributing companies or organizations
Datos de entrada utilizados
bus_factor1
contributors_sampled25
top_contributor_share0,904
Cómo se puntúa
36.2/46.8Resolución de issues — 78% de issues cerradas
26.3/38.3Aceptación de PR — 46/67 PR decididos fusionados
6/15OpenSSF Scorecard: Code-Review — Found 9/20 approved changesets -- score normalized to 4
Datos de entrada utilizados
merged_prs46
open_issues18
closed_issues62
issue_closed_ratio0,775
closed_unmerged_prs21
Cómo se puntúa
10/30Respaldo de la propiedad — cuenta personal (usuario)
0/20Dominio verificado — no aplicable a cuentas de usuario
21.5/25Alcance del propietario — 982 seguidores de chapmanb
25/25Trayectoria — 121 repos públicos, cuenta de ~17 años
Datos de entrada utilizados
followers982
owner_typeUser
is_verified
owner_loginchapmanb
public_repos121
account_age_days6433
Excluidos de la puntuación (sin datos o no aplicable): Dominio verificado. Los pesos restantes se han renormalizado.
Cómo se puntúa
25/25Publicado y resoluble — 1 paquete(s) en pypi
4/35Recencia de publicación — última publicación hace 904 días
20/20Historial de versiones — 15 versiones en el registro
20/20No obsoleto — activo, ni obsoleto ni retirado
Datos de entrada utilizados
packagesbcbio-gff
ecosystemspypi
any_deprecatedno
min_days_since_publish904

Calidad de Ingeniería

¿Existen unas prácticas mínimas de ingeniería y documentación?

36En riesgo · 20% del índice global
Cómo se puntúa
0/24Flujos de trabajo de CI
24/24Pruebas presentes
0/16Configuración de linter
0/9.6Hooks de pre-commit
0/6.4.editorconfig
0/20OpenSSF Scorecard: CI-Tests — 0 out of 9 merged PRs checked by a CI test -- score normalized to 0
Datos de entrada utilizados
has_cino
has_tests
has_editorconfigno
has_linter_configno
has_precommit_configno

Documentación

55Moderado
Cómo se puntúa
30/30README
0/25Directorio de documentación
15/15Sitio de documentación / página del proyecto — http://bcbio.wordpress.com
10/10Descripción del repositorio
0/10Topics
0/10Wiki
Datos de entrada utilizados
topics
has_wikino
homepagehttp://bcbio.wordpress.com
has_readme
has_docs_dirno
has_description

Seguridad

¿Son sólidas las prácticas visibles de seguridad y de cadena de suministro, sin exposición jurisdiccional de alto riesgo sin resolver?

43En riesgo · 16% del índice global
Cómo se puntúa
7.5/7.5Binary-Artifacts — no binaries found in the repo
0/7.5Branch-Protection — branch protection not enabled on development/release branches
0/2.5CI-Tests — 0 out of 9 merged PRs checked by a CI test -- score normalized to 0
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
3/7.5Code-Review — Found 9/20 approved changesets -- score normalized to 4
2.5/2.5Contributors — project has 25 contributing companies or organizations
0/10Dangerous-Workflow — sin datos
0/7.5Dependency-Update-Tool — no update tool detected
0/5Fuzzing — project is not fuzzed
0/2.5Licencia — license file not detected
0/7.5Maintained — 0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
0/5Packaging — sin datos
0/5Pinned-Dependencies — sin datos
0/5SAST — SAST tool is not run on all commits -- score normalized to 0
0/5Security-Policy — security policy file not detected
0/7.5Signed-Releases — sin datos
0/7.5Token-Permissions — sin datos
7.5/7.5Vulnerabilities — 0 existing vulnerabilities detected
Datos de entrada utilizados
sourceopenssf_scorecard
checks_evaluated13
scorecard_versionv5.5.0
checks_inconclusive5
scorecard_aggregate2,9
Excluidos de la puntuación (sin datos o no aplicable): dangerous_workflow, packaging, pinned_dependencies, signed_releases, token_permissions. Los pesos restantes se han renormalizado.
Cómo se puntúa
35/35Dependencias directas libres de avisos conocidos — ninguna dependencia directa tiene un aviso conocido
25/25Dependencias indirectas libres de avisos conocidos — ninguna dependencia indirecta tiene un aviso conocido
0/40Sin avisos pendientes — ningún aviso tiene fecha de publicación
Datos de entrada utilizados
sourceosv
advisories0
affected_packages0
assessed_packages3
unassessed_packages0
affected_by_severitynone
direct_affected_packages0
Excluidos de la puntuación (sin datos o no aplicable): Sin avisos pendientes. Los pesos restantes se han renormalizado. Se cotejó el cierre de dependencias en tiempo de ejecución de pypi:bcbio-gff@0.7.1 —lo que arrastra la instalación del paquete publicado—: 3 paquetes. No se analiza la alcanzabilidad.

Preparación para IA

¿Hasta qué punto está el repositorio preparado para desarrollarse y mantenerse con agentes de codificación de IA? Es una insignia independiente y experimental — peso 0,0, de modo que se presenta por separado y no afecta a la puntuación de salud global.

37En riesgo · 0% del índice global
Cómo se puntúa
0/45Instrucciones para agentes — sin CLAUDE.md / AGENTS.md / reglas de editor
0/15Documentación legible por máquinas (llms.txt)
16/40Historial de commits legible — 30 de 100 commits humanos declaran su intención (asunto estructurado o cuerpo explicativo)
Datos de entrada utilizados
has_llms_txtno
legible_history_share0,3
agent_instruction_files
agent_instruction_max_bytes
Cómo se puntúa
18/18Arranque con un solo comando — abstracts/bosc_2015_bcbio_prioritization/Makefile, abstracts/bosc_2016_bcbio_cwl/Makefile, abstracts/bosc_2017_bcbio_integration/Makefile, abstracts/bosc_2018_bcbio_validation/Makefile, abstracts/hackathon_workshop_2017/Makefile, nextgen/docs/Makefile, papers/bcbio-nextgen/Makefile
22/22Pruebas automatizadas
0/11Configuración de lint / formato
0/11Verificación estática de tipos
0/10Entorno reproducible
0/10Práctica demostrada con agentes — ningún commit con autoría de agente entre los últimos 100
0/8Mantenimiento automatizado — no se observan actualizaciones automáticas de dependencias
0/10OpenSSF Scorecard: Pinned-Dependencies — sin datos
Datos de entrada utilizados
has_nixno
has_tests
lockfiles
has_dockerfileno
typed_languageno
bootstrap_filesabstracts/bosc_2015_bcbio_prioritization/Makefile, abstracts/bosc_2016_bcbio_cwl/Makefile, abstracts/bosc_2017_bcbio_integration/Makefile, abstracts/bosc_2018_bcbio_validation/Makefile, abstracts/hackathon_workshop_2017/Makefile, nextgen/docs/Makefile, papers/bcbio-nextgen/Makefile
has_devcontainerno
has_linter_configno
typecheck_configs
agent_commit_share0
toolchain_manifests
dependency_bot_commit_share0
Excluidos de la puntuación (sin datos o no aplicable): OpenSSF Scorecard: Pinned-Dependencies. Los pesos restantes se han renormalizado.
Cómo se puntúa
0/45Código verificable por tipos — Python sin configuración de verificación de tipos
54.7/55Tamaños de archivo manejables — 1/186 archivos fuente de más de 60 KB
Datos de entrada utilizados
primary_languagePython
largest_source_bytes70.319
source_files_sampled186
oversized_source_files1
Cómo se puntúa
0/40Esquema de API (OpenAPI/GraphQL/proto)
0/20Servidor MCP
40/40Ejemplos ejecutables — examples, notebooks
Datos de entrada utilizados
example_dirsexamples, notebooks
has_mcp_signalno
api_schema_files

Datos clave

644estrellas de GitHub
25contribuidores
0commits en los últimos 12 meses
531días desde el último push
2versiones publicadas
1factor bus
18issues abiertas
PyPIecosistemas de paquetes

Advertencias de recopilación de datos

  • pypi package 'bcbio-phyloblast' points at a different repository (http://bcbio.wordpress.com); excluded from ecosystem scoring

Más detalle

Historial de estrellas y forks 644 ★ / 241 ⇿
644Estrellas
241Forks
2Versiones

Cuándo se añadió cada estrella y fork, recopilado de GitHub y agrupado por día. El crecimiento acumulado se sitúa justo encima de las adiciones diarias que lo componen, de modo que ambos se leen en conjunto: la acumulación orgánica sostenida no se parece en nada a un pico abrupto y efímero. Cuando esa diferencia es medible, se informa como autenticidad del crecimiento.

0125250375500625750643227202008-122017-092026-06
Mayor 0Menor 1Parche 1

Cada punto abarca 17 días.

OpenSSF Scorecard 2.9 / 10
2.9agregado

Evaluación de seguridad independiente y agnóstica en cuanto a herramientas, procedente del proyecto de código abierto OpenSSF Scorecard. Cada comprobación premia una práctica de seguridad, no la herramienta de un proveedor concreto. Las comprobaciones que Scorecard no pudo determinar se marcan como n/d y se excluyen de la puntuación de seguridad (nunca se cuentan como cero).Scorecard v5.5.0 · 2026-07-21 23:47 UTC

10Binary-Artifactsno binaries found in the repo
0Branch-Protectionbranch protection not enabled on development/release branches
0CI-Tests0 out of 9 merged PRs checked by a CI test -- score normalized to 0
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
4Code-ReviewFound 9/20 approved changesets -- score normalized to 4
10Contributorsproject has 25 contributing companies or organizations
n/dDangerous-Workflowno workflows found
0Dependency-Update-Toolno update tool detected
0Fuzzingproject is not fuzzed
0Licenselicense file not detected
0Maintained0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0
n/dPackagingpackaging workflow not detected
n/dPinned-Dependenciesno dependencies found
0SASTSAST tool is not run on all commits -- score normalized to 0
0Security-Policysecurity policy file not detected
n/dSigned-Releasesno releases found
n/dToken-PermissionsNo tokens found
10Vulnerabilities0 existing vulnerabilities detected
Todas las dependencias 3

Conjunto completo de dependencias resueltas según el grafo de dependencias de GitHub: 0 paquetes directos y 3 indirectos (transitivos). El cierre transitivo es completo cuando el repositorio incluye un lockfile.

RegistroPaqueteVersiónRelación
PyPIbiopythonindirecta
PyPIpyyamlindirecta
PyPIsixindirecta
Avisos de dependencias 0

Instalar pypi:bcbio-gff@0.7.1 arrastra 3 paquetes, directos y transitivos: 0 tienen avisos conocidos, de los cuales 0 son dependencias directas.

Ningún aviso conocido afecta a las dependencias evaluadas.

Un aviso significa que la versión registrada en el grafo de dependencias cae dentro del rango afectado de un aviso. No se analiza la alcanzabilidad, y el grafo incluye fijaciones de desarrollo y prueba: un hallazgo puede referirse al utillaje y no al software distribuido.

Informe JSON sin procesar legible por máquina
{
  "data": {
    "repo": {
      "topics": [],
      "is_fork": false,
      "size_kb": 83224,
      "has_wiki": false,
      "homepage": "http://bcbio.wordpress.com",
      "languages": {
        "R": 14547,
        "CSS": 90068,
        "TeX": 142313,
        "HTML": 248867,
        "SCSS": 16872,
        "Shell": 2356,
        "Python": 850665,
        "Clojure": 9818,
        "Makefile": 6313,
        "JavaScript": 88232,
        "Jupyter Notebook": 5429
      },
      "pushed_at": "2025-02-05T14:20:51Z",
      "created_at": "2008-12-09T21:05:22Z",
      "owner_type": "User",
      "updated_at": "2026-07-09T17:16:49Z",
      "description": "Incubator for useful bioinformatics code, primarily in Python and R",
      "is_archived": false,
      "is_disabled": false,
      "license_spdx": null,
      "default_branch": "master",
      "license_spdx_raw": null,
      "primary_language": "Python",
      "significant_languages": [
        "Python",
        "HTML"
      ]
    },
    "owner": {
      "blog": "http://bcb.io",
      "name": "Brad Chapman",
      "type": "User",
      "login": "chapmanb",
      "company": "Ginkgo Bioworks",
      "location": "Boston, MA",
      "followers": 982,
      "avatar_url": "https://avatars.githubusercontent.com/u/39391?v=4",
      "created_at": "2008-12-09T18:45:45Z",
      "is_verified": null,
      "public_repos": 121,
      "account_age_days": 6433
    },
    "license": {
      "state": "absent",
      "spdx_id": null,
      "raw_spdx": null,
      "file_present": false,
      "scorecard_found": false,
      "profile_has_license": false
    },
    "activity": {
      "releases": [
        {
          "tag": "v0.6.7",
          "kind": "patch",
          "published_at": "2021-10-06T13:26:49Z"
        },
        {
          "tag": "v0.6.0",
          "kind": "minor",
          "published_at": "2013-02-06T10:19:08Z"
        }
      ],
      "recent_commits": [
        {
          "oid": "320353c64ee0dc938113ca36f19b2e6de6b597be",
          "body": "fix: Suppress warning about invalid escape sequence",
          "is_bot": false,
          "headline": "Merge pull request #147 from phaverty-ginkgo/suppress_regex_warning",
          "author_name": "Rory Kirchner",
          "author_login": "roryk",
          "committed_at": "2025-02-05T14:20:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6fca8aa5aabbd7e3d5ff63f3d9f2afc73e9584b7",
          "body": null,
          "is_bot": false,
          "headline": "Suppress warning about invalid excape sequence",
          "author_name": "Peter Haverty",
          "author_login": "phaverty-ginkgo",
          "committed_at": "2025-02-04T23:41:08Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9c6d83ee3f0491f647a9ecd5947b13c99b478f26",
          "body": null,
          "is_bot": false,
          "headline": "Version bump: bcbio-gff-v0.7.1",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2024-01-29T13:59:34Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "03e96caa2b91cce22b6d05cf5d5f473cccbb7eb2",
          "body": null,
          "is_bot": false,
          "headline": "Do not smother Biopython deprecation warnings. Fixes #139",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2024-01-29T13:45:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dd0dd8fa6732ff48afc38a7f05aaa32d37010761",
          "body": "updates for biopython 1.82",
          "is_bot": false,
          "headline": "Merge pull request #141 from fubar2/master",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2024-01-29T13:23:43Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "0db78650b163166337328ea4613ee6a0d9ccc5fa",
          "body": "docs: Fix a few typos",
          "is_bot": false,
          "headline": "Merge pull request #135 from timgates42/bugfix_typos",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2024-01-29T13:21:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "eec72c3faca1e5e9e4e48dbf46d396a9045baa3b",
          "body": "fix nofuzzy_start/end deprecation - replaced with start and end\nmove all strands in seqfeatures into simplelocations\nPasses tests !",
          "is_bot": false,
          "headline": "updates for biopython 1.86",
          "author_name": "fubar2",
          "author_login": "fubar2",
          "committed_at": "2024-01-02T23:12:18Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "81442c07173aaa59cbc1be33dd4a6e0eee87c5f6",
          "body": "Fix error with biopython 1.81",
          "is_bot": false,
          "headline": "Merge pull request #137 from abretaud/unknownseq",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2023-03-13T12:55:20Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8a36af0c1af2c2b39e841cea2496f7a367ffdae5",
          "body": null,
          "is_bot": false,
          "headline": "Fix error with biopython 1.81",
          "author_name": "Anthony Bretaudeau",
          "author_login": "abretaud",
          "committed_at": "2023-02-15T15:53:12Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "63224f4b106c49dcfa25cf73406dcaa047a77758",
          "body": "There are small typos in:\n- posts/conferences/bosc2018_day1a.md\n- posts/seminars/tumor_heterogeneity_carter.md\n\nFixes:\n- Should read `suppressors` rather than `supressors`.\n- Should read `service` rather than `serivce`.\n\nSigned-off-by: Tim Gates <tim.gates@iress.com>",
          "is_bot": false,
          "headline": "docs: Fix a few typos",
          "author_name": "Tim Gates",
          "author_login": "timgates42",
          "committed_at": "2022-07-19T10:58:38Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dbfb52711f0bfcc1d26c5a5b53c9ff4f50dc0027",
          "body": null,
          "is_bot": false,
          "headline": "v0.6.9: fix ID matching when no rec.id fixes #134",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2021-11-18T15:07:37Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "438f4242063b29f507282bc507ca67fddcfa64ed",
          "body": "NCBI PGAP can produce fastas with NCBI headers (`lcl|1`) and GFFs\nwith plain IDs (`1`). This avoids creating duplicate records by\nmatching these and using a consistent contig ID when combining sequences\nand GFF files.\n\nThe contig ID used in the final output SeqRecords is the first one\nencountered. So if you use an external FASTA it's the IDs in the FASTA\nand if you use a GFF embedded FASTA it's the IDs in the GFF.",
          "is_bot": false,
          "headline": "v0.6.8: match records between fasta and GFF with NCBI style headers",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2021-11-03T09:19:56Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "599c64c5d5f5a53ec35c6c3f3619614fa92e3a3c",
          "body": null,
          "is_bot": false,
          "headline": "v0.6.7: handle problem sequence-region directives without contigs",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2021-10-06T13:26:49Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d3c51a22ac961584cca1689c7261b1c8ebe1830a",
          "body": null,
          "is_bot": false,
          "headline": "GFF to Genbank: support latest biopython without alphabets",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2021-10-06T13:15:56Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "74502a06d56afa9e1d60bffcb21725f078d8d83f",
          "body": "Support zero length reads in FakeHandle",
          "is_bot": false,
          "headline": "Merge pull request #133 from peterjc/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2021-06-08T09:17:29Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f980be9bcdddfae96c605694e90465bc6f428c5d",
          "body": "Biopython now uses this to detect file mode (text/unicode versus binary/bytes).\r\n\r\nhttps://github.com/biopython/biopython/issues/3575",
          "is_bot": false,
          "headline": "Support zero length reads in FakeHandle",
          "author_name": "Peter Cock",
          "author_login": "peterjc",
          "committed_at": "2021-06-03T16:46:24Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "3ba0ec42120065cca136fd496948948f57081039",
          "body": "Add license to setup.py",
          "is_bot": false,
          "headline": "Merge pull request #129 from sergiuser1/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2020-02-12T10:58:57Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e3300a54697f0e54dc30c0b478aa88a73507be48",
          "body": null,
          "is_bot": false,
          "headline": "Add license to setup.py",
          "author_name": "Sergiu",
          "author_login": "sergiuser1",
          "committed_at": "2020-02-10T14:36:16Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4bb602b281497d691edfab6b077b2c8eff8555e9",
          "body": " py3: raise TypeError on binary file handle",
          "is_bot": false,
          "headline": "Merge pull request #127 from tipabu/py3-binary-mode",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2019-07-09T09:07:28Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "33869f3933d23e0c0b7655cec4aa474f48f9b302",
          "body": "Previously you would get errors like\n\n    TypeError: instance has no next() method",
          "is_bot": false,
          "headline": "Fix tests on py2",
          "author_name": "Tim Burke",
          "author_login": "tipabu",
          "committed_at": "2019-07-08T18:29:23Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "76f9c1179085674070f4af4c12ed1cea421aec6d",
          "body": "Closes #125",
          "is_bot": false,
          "headline": "py3: raise TypeError on binary file handle",
          "author_name": "Tim Burke",
          "author_login": "tipabu",
          "committed_at": "2019-07-08T18:27:30Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6ecbdc86390c9dfa25cd738cd92c4c45a543b392",
          "body": "…line\n\nfix crashes when parsing gtf files which contain gene lines",
          "is_bot": false,
          "headline": "Merge pull request #126 from DavyCats/dc_gffparser_fix_crash_on_gene_…",
          "author_name": "Rory Kirchner",
          "author_login": "roryk",
          "committed_at": "2019-06-19T13:39:27Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a4c26381c7535bcec5ed284943cbef143a62948a",
          "body": null,
          "is_bot": false,
          "headline": "fix crashes when parsing gtf files which contain gene lines",
          "author_name": "DavyCats",
          "author_login": "DavyCats",
          "committed_at": "2019-06-19T11:36:14Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "45b95cb71ac76410708cbe9a8a50972d6912aee9",
          "body": null,
          "is_bot": false,
          "headline": "Ginkgo data talk: finalize and improve after practice",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-28T13:47:18Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "bad8ad72da8862636da16a1380868184d57e54d6",
          "body": "Add biopython dependency to bcbio gff",
          "is_bot": false,
          "headline": "Merge pull request #124 from rhpvorderman/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2019-03-28T09:57:44Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "eb9c3cfbb388bed7fe51e43e036a928d85b2ddd1",
          "body": null,
          "is_bot": false,
          "headline": "Ginkgo data work in progress for BIG meeting",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-27T19:06:45Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d59d17bc1c539b585586d99a2be44336ccba528e",
          "body": "The package depends on biopython.",
          "is_bot": false,
          "headline": "Add biopython dependency",
          "author_name": "Ruben Vorderman",
          "author_login": "rhpvorderman",
          "committed_at": "2019-03-27T11:53:02Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "15c1d5e240b57ecd907e0f25a7f29afc040ecc42",
          "body": null,
          "is_bot": false,
          "headline": "v0.6.6: fix for LICENSE file install bioconda/bioconda-recipes#13873",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-17T08:50:58Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "90f3bb79c14a8bb4f1b909da233726401c4ed6e6",
          "body": "chapmanb/bcbb#123",
          "is_bot": false,
          "headline": "Glimmer: ensure have Bio.Seq for reverse complement",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-14T13:08:11Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "112732cec1ec8e58a2a4be4bbff20535bb1391c9",
          "body": null,
          "is_bot": false,
          "headline": "Python 3 compatibility: reduce #123",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-12T10:01:15Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6eff6585d4336b62c4f6d516bb41d871cd4774d0",
          "body": null,
          "is_bot": false,
          "headline": "Avoid reduce errors with missing exon sequence. Fixes #123",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-10T09:09:13Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "91eea6bab7ef5fdbc541cf9d5ac0587f97386180",
          "body": "Add LICENSE file to bcbio-gff Manifest.in",
          "is_bot": false,
          "headline": "Merge pull request #122 from dfornika/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2019-03-05T11:23:20Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7ef85bdcffa75bb52c83c0ccf0df997a484d2f57",
          "body": null,
          "is_bot": false,
          "headline": "Add LICENSE file to Manifest.in",
          "author_name": "Dan Fornika",
          "author_login": "dfornika",
          "committed_at": "2019-03-03T21:28:31Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "2615a4117c19c4d8c196e6baf6cc46d05fb209de",
          "body": null,
          "is_bot": false,
          "headline": "Recommendations for variant calling and bcbio CWL runs",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-03-01T10:17:39Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9b72800127267c8b68a4c08471e00d776b26ed21",
          "body": null,
          "is_bot": false,
          "headline": "Bcbio GFF v0.6.5: Python 3 compatibility; fixes #120",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-02-11T11:16:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9e420bd40a69e73da3fc2b3a9b4ab6a40c157413",
          "body": null,
          "is_bot": false,
          "headline": "Notes from BIG community meetings",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2019-01-10T19:21:38Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "2be0ccfb3b8ca35501539d5cfc2c782bb3139c20",
          "body": null,
          "is_bot": false,
          "headline": "talks: teaching slides for NGS long course at Harvard Chan",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-10-10T09:35:55Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "841c199b3904e2ccb8a07c440cd01c5b32ad96d3",
          "body": null,
          "is_bot": false,
          "headline": "Add license for code and docs. Fixes #119",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-09-11T13:51:17Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7d94258aa8d9ea5660018c4dbdc0142f07fbc76c",
          "body": null,
          "is_bot": false,
          "headline": "Finalize PGP getting started talk",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-07-21T09:31:43Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "683b6828c52acb8a9352bfda828a315a69581b74",
          "body": "…back from team",
          "is_bot": false,
          "headline": "PGP Hackathon 1.0 example projects: update and organize based on feed…",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-07-18T16:00:48Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "2bc761a6572e35950bec68172c1c4fdc1af87e1d",
          "body": null,
          "is_bot": false,
          "headline": "BOSC/GCC notes: add links between writeups",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-29T20:20:29Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a025127937ad2f0388b194a9170bbbf58f22bd21",
          "body": "Mention parallel sessions; link to part 2",
          "is_bot": false,
          "headline": "Merge pull request #117 from nlharris/patch-2",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2018-06-29T20:11:58Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9160455752eaa5f81c1ade7110b6fd445b9aa3cf",
          "body": "Thanks for putting together this great summary, Brad!\r\nI thought it would be helpful to include a link to part 2 of your summary, and to mention that there were parallel GCC/BOSC sessions and you are reporting only on the BOSC ones.\r\n(Feel free to change any of my wording or formatting!)",
          "is_bot": false,
          "headline": "Mention parallel sessions; link to part 2",
          "author_name": "Nomi Harris",
          "author_login": "nlharris",
          "committed_at": "2018-06-29T18:32:10Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "735595c19f172a16a7a0d34a62d4d0947dec49f6",
          "body": "Update bosc2018_day1a.md",
          "is_bot": false,
          "headline": "Merge pull request #116 from jdidion/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2018-06-29T17:38:08Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "3a1f79371d443ad37b66129284d80710a31912a2",
          "body": null,
          "is_bot": false,
          "headline": "Update bosc2018_day1a.md",
          "author_name": "John Didion",
          "author_login": "jdidion",
          "committed_at": "2018-06-29T17:26:42Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e859fade97594e3f900d94ca9c7c0aa261ff838d",
          "body": null,
          "is_bot": false,
          "headline": "Notes from Day 2 of Bioinformatics Community Conference",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-29T12:40:40Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7d38b31807b1eb671e3bfc8080bad9af6226c229",
          "body": null,
          "is_bot": false,
          "headline": "Fix markdown formatting for presenters",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-28T13:34:24Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "338c3fb0fdf4e7ba7aac1f56bcce2dbc2eadf89b",
          "body": null,
          "is_bot": false,
          "headline": "Notes from day 1 of bioinformatics community conference",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-28T13:30:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fde83533f6c33c216b2c8513c946c2ff7cf2c9d0",
          "body": null,
          "is_bot": false,
          "headline": "Finalize bcbio validation talk for BOSC 2018",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-27T13:52:59Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fb8f03a4b83702782836f74a778f43915b14729e",
          "body": null,
          "is_bot": false,
          "headline": "BOSC2018 talk on bcbio validations",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-26T11:02:12Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6e968647a711af63fc45a4bd99b7bfb4d5a87b22",
          "body": null,
          "is_bot": false,
          "headline": "Finalize bcbio training for BOSC 2018",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-24T09:43:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "68255ba6c31098ae2953904a7fdab215f5d68299",
          "body": null,
          "is_bot": false,
          "headline": "Initial work on bcbio CWL + calling training for BOSC",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-06-22T09:43:24Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "308df7d0f5b90ad7b65655ae3fa4afa3c69b1372",
          "body": null,
          "is_bot": false,
          "headline": "Notes from NIH Data Commons workshop in Boston",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-05-31T17:46:26Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f73adddaf448c2789bb173ffc427f7ebfe0a08e0",
          "body": null,
          "is_bot": false,
          "headline": "PGP analysis walk through; untap, VCF, Arvados CWL",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-04-26T09:48:41Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "edb479c3f7ffe891aa6a3a190452f86746435107",
          "body": null,
          "is_bot": false,
          "headline": "Notes from CHI 2018 Hackathon workshop",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-04-23T08:48:07Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "78a71de81efc69d6d919187e0206ae54190249b9",
          "body": null,
          "is_bot": false,
          "headline": "Codefest poster for CHI 2018 Hackathon workshop",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-04-16T09:55:14Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5355e9ffbf80929a0eca27065e5af11610bbab44",
          "body": null,
          "is_bot": false,
          "headline": "Short talk on somatic calling with bcbio for DFCI discussion",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-04-06T19:41:32Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "77509219c52e738180e5bed7642db2713af75c54",
          "body": null,
          "is_bot": false,
          "headline": "Fix typos in abstract",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-03-20T09:57:54Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "426ce64a81399354e89ef254fa646dd760a8db77",
          "body": null,
          "is_bot": false,
          "headline": "bcbio validation abstract for BOSC 2018",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-03-18T15:55:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "bbdae40dbb180ee160802a316c3ef6e55e64cc05",
          "body": null,
          "is_bot": false,
          "headline": "Annotate BED files with hg38 alts",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-02-26T19:47:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fb5cd22352f408884bd342faf68cf37fc0e77f3c",
          "body": "make gff_to_genbank.py with python3 compatibility",
          "is_bot": false,
          "headline": "Merge pull request #114 from hsiaoyi0504/python3_compatible",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2018-02-23T11:04:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fa6498b260a9735e8b6d538fbaf1f1f28aaf14ba",
          "body": null,
          "is_bot": false,
          "headline": "make gff_to_genbank.py with python3 compatibility",
          "author_name": "Yi Hsiao",
          "author_login": "hsiaoyi0504",
          "committed_at": "2018-02-22T20:21:03Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "478bcdb5db29a3ef2c92567e29a27f6aeab26215",
          "body": "Fixed a typo",
          "is_bot": false,
          "headline": "Merge pull request #113 from hsiaoyi0504/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2018-02-22T11:34:01Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "03eaf1e5d117905e330b0c69f8bc1782fc667f02",
          "body": null,
          "is_bot": false,
          "headline": "Fixed a typo",
          "author_name": "hsiao yi",
          "author_login": "hsiaoyi0504",
          "committed_at": "2018-02-22T02:23:13Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9a9b4ea94775878d710218add605ba90ba1c826b",
          "body": null,
          "is_bot": false,
          "headline": "Codefest proposoal for Hackathon Workshop 2018",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-02-04T11:02:39Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "56f7b6ec49b5d6d06e3f5fcf027ef6c869ee1eff",
          "body": null,
          "is_bot": false,
          "headline": "Talk for Park lab bcbio discussion",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2018-01-26T11:24:12Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7ade67d1f9db642618227d6a6904d1d8deba4e5e",
          "body": null,
          "is_bot": false,
          "headline": "Slides for BIG talk on bcbio + CWL",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-11-02T10:08:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b6d890ca29aaf04902fbe80e713eef4c34d2220c",
          "body": null,
          "is_bot": false,
          "headline": "Fix disease typo. Thanks @mjafin",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-10-07T17:58:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5b1b8276c04331772ac0634d5bb358b95f401e84",
          "body": null,
          "is_bot": false,
          "headline": "Notes from DNAnexus user group meeting, day 2",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-10-07T09:31:59Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "685a99a9c5b3e0f09e3fef118bb78962d7729a16",
          "body": null,
          "is_bot": false,
          "headline": "Notes from DNAnexus connect day 1",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-10-06T13:11:59Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "73db7187fe9146f866d89d2a8944c74f0dae5c0c",
          "body": "Update chapman_research_statement.org",
          "is_bot": false,
          "headline": "Merge pull request #112 from sjhosui/patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2017-08-18T18:16:42Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "ceaa1e35a6c7f498c3a8a2f065cb7d25994860a3",
          "body": null,
          "is_bot": false,
          "headline": "Merge branch 'master' into patch-1",
          "author_name": "Brad Chapman",
          "author_login": "chapmanb",
          "committed_at": "2017-08-18T18:16:29Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "de7558854321b00f98edc54844d7f6f21a396b6c",
          "body": null,
          "is_bot": false,
          "headline": "Rework opening paragraph to focus on science",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-08-18T15:27:22Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "18291898313a6e0bcc9920714f8e4f5baf40c9bb",
          "body": null,
          "is_bot": false,
          "headline": "Update chapman_research_statement.org",
          "author_name": "Shannan Ho Sui",
          "author_login": "sjhosui",
          "committed_at": "2017-08-18T15:26:58Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4871c97d393d497c2cddd3a6f37cb5ba7fc4299b",
          "body": "Thanks to Shannan Ho Sui for feedback",
          "is_bot": false,
          "headline": "Reorganize CV and research statement",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-08-17T19:26:35Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8c0a218efec56c626d6c3bc89a4c0a82098e406a",
          "body": null,
          "is_bot": false,
          "headline": "Update CV and research statement for Senior Scientist app",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-08-17T17:41:10Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "0608ae169c6f67dc175992e51fb31fc849ebb593",
          "body": null,
          "is_bot": false,
          "headline": "Fix formatting",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-23T10:26:50Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b17f3988a4cbe18c242759e8b5dad14fe6b97050",
          "body": null,
          "is_bot": false,
          "headline": "BOSC notes from day 2 morning",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-23T10:24:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "53493b0ea50fdcbe75e6bd84483b2062d5700810",
          "body": null,
          "is_bot": false,
          "headline": "BOSC: day 1 afternoon talks",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-23T06:39:58Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a8e96a56f87afa4efce8b87ea1fbd73117a4c3d4",
          "body": null,
          "is_bot": false,
          "headline": "Notes from BOSC day 1 morning",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-22T12:19:39Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b5c0b003681d43e831e959046c4063d6354dd62a",
          "body": null,
          "is_bot": false,
          "headline": "BOSC 2017 slides",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-22T05:57:54Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f05fc9d3de2c4e75e08772e70091809acf2f8a0a",
          "body": null,
          "is_bot": false,
          "headline": "Finalize teaching slides after run through",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-06T11:45:56Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9109e2774a5d4a378aac32fe44bae0b9b9c4bb8b",
          "body": null,
          "is_bot": false,
          "headline": "Variant calling talk: 2017 summer NGS long course",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-07-06T10:04:16Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "c40cd91dfebd0f6f4d2ca5949a289a1172a788e6",
          "body": null,
          "is_bot": false,
          "headline": "Adjust figures to fit URLs",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-05-01T09:40:19Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "19464c9b1b810fcd1b69bcc4b2c9df5f478f483a",
          "body": null,
          "is_bot": false,
          "headline": "CGC talk: finalize and describe interoperability",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-04-29T10:16:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1c8d79dc849cea409420db93bbb9728bc9979d7e",
          "body": null,
          "is_bot": false,
          "headline": "Initial talk for cancer genomics cloud training",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-04-25T10:01:35Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "756a480399ca78fb047dbd0fc07d92a4f4965da4",
          "body": null,
          "is_bot": false,
          "headline": "Fix Oliver's URL",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-04-14T00:51:54Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "af13fd5bc967c6d6e5f61fb99eaf3d97845e969a",
          "body": null,
          "is_bot": false,
          "headline": "Last tweaks to BOSC abstract before submission",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-04-13T18:38:21Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "185e78e93340673981abef00995c80b939c4231a",
          "body": null,
          "is_bot": false,
          "headline": "Shorten and clean up for single page abstract",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-04-13T10:04:38Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "20e80f39c5238a4b42c402fe4ae3348632826365",
          "body": null,
          "is_bot": false,
          "headline": "bcbio abstract for BOSC 2017",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-04-13T09:58:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "68a6b8ea7f926020150005ae532f9156e69b487f",
          "body": null,
          "is_bot": false,
          "headline": "Overview of heterogeneity status and plans in bcbio",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2017-03-28T15:33:31Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1ee41506021590cba77bc3a1afd846aea6042254",
          "body": null,
          "is_bot": false,
          "headline": "Writeup for Hackathon Workshop on Codefest",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-12-18T11:11:32Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dd0c81350fccf91f49310cd5628e97821fb4b6fe",
          "body": null,
          "is_bot": false,
          "headline": "Talk to BIG meeting: bcbio + CWL",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-11-03T10:00:55Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8cc002adeac11a5b1510f7890a7214b2c9ac4505",
          "body": null,
          "is_bot": false,
          "headline": "Talk for Broad software engineering seminar",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-09-28T09:56:04Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7cc2de87c8eebe0772280a82379ebc73c64a5cc7",
          "body": "Biopython deprecated and removed sub_features but the GFF code has not\nyet put in proper fixes. This works around the issue by adding\nsub_features when missing so GFF output still works correctly\nwith Biopython >= 1.68.\n\nFixes chapmanb/bcbb#110. Fixes biopython/biopython#928",
          "is_bot": false,
          "headline": "Support Biopython 1.68 with sub_features workaround",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-09-09T19:43:19Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "ad39feb6a044baa371c360fe5a0a4e4acc46e96c",
          "body": null,
          "is_bot": false,
          "headline": "Slides for long course teaching on variant calling",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-08-11T10:17:17Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5b731ec2b9e68360cbd2d4a065ead27887cdd8a8",
          "body": null,
          "is_bot": false,
          "headline": "Notes from BOSC day 2",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-07-10T01:02:11Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "263981dda3087dea0fc41aaa70eed1993c436dfb",
          "body": null,
          "is_bot": false,
          "headline": "Notes from BOSC 2016 day 1",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-07-09T10:55:11Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "607ee5a9d3629c711cde146ccb420482bbbfd074",
          "body": null,
          "is_bot": false,
          "headline": "Talk for BOSC 2016 on bcbio and CWL",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-07-08T11:03:05Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dec13d6a6a95513792de63fac42edf0b6785a237",
          "body": null,
          "is_bot": false,
          "headline": "Notes from variant modeling collaboration",
          "author_name": "chapmanb",
          "author_login": "chapmanb",
          "committed_at": "2016-06-04T09:51:37Z",
          "body_truncated": false,
          "is_coding_agent": false
        }
      ],
      "releases_count": 2,
      "commits_last_year": 0,
      "latest_release_at": "2021-10-06T13:26:49Z",
      "latest_release_tag": "v0.6.7",
      "releases_from_tags": true,
      "days_since_last_push": 531,
      "active_weeks_last_year": 0,
      "days_since_latest_release": 1749,
      "mean_days_between_releases": 3164.1
    },
    "community": {
      "has_readme": true,
      "has_license": false,
      "has_description": true,
      "has_contributing": false,
      "health_percentage": 28,
      "has_issue_template": false,
      "has_code_of_conduct": false,
      "has_pull_request_template": false
    },
    "ecosystem": {
      "packages": [
        {
          "name": "bcbio-gff",
          "exists": true,
          "license": "Biopython License",
          "keywords": [],
          "ecosystem": "pypi",
          "matches_repo": true,
          "registry_url": "https://pypi.org/project/bcbio-gff/",
          "is_deprecated": false,
          "latest_version": "0.7.1",
          "repository_url": "https://github.com/chapmanb/bcbb/tree/master/gff",
          "versions_count": 15,
          "total_downloads": null,
          "dependents_count": null,
          "deprecation_note": null,
          "maintainers_count": null,
          "monthly_downloads": null,
          "first_published_at": "2013-05-16T16:23:06.428814Z",
          "latest_published_at": "2024-01-29T14:06:00.728394Z",
          "latest_version_yanked": null,
          "days_since_latest_publish": 904
        },
        {
          "name": "bcbio-phyloblast",
          "exists": true,
          "license": "MIT",
          "keywords": [],
          "ecosystem": "pypi",
          "matches_repo": false,
          "registry_url": "https://pypi.org/project/bcbio-phyloblast/",
          "is_deprecated": false,
          "latest_version": "0.1.2",
          "repository_url": "http://bcbio.wordpress.com",
          "versions_count": 3,
          "total_downloads": null,
          "dependents_count": null,
          "deprecation_note": null,
          "maintainers_count": null,
          "monthly_downloads": null,
          "first_published_at": "2013-01-14T15:55:41.490494Z",
          "latest_published_at": "2013-02-28T10:38:26.776414Z",
          "latest_version_yanked": null,
          "days_since_latest_publish": 4891
        }
      ]
    },
    "popularity": {
      "forks": 241,
      "stars": 644,
      "watchers": 55,
      "fork_history": {
        "days": [
          {
            "date": "2009-03-11",
            "count": 1
          },
          {
            "date": "2009-05-10",
            "count": 1
          },
          {
            "date": "2009-11-16",
            "count": 1
          },
          {
            "date": "2010-03-18",
            "count": 1
          },
          {
            "date": "2010-05-10",
            "count": 1
          },
          {
            "date": "2010-10-07",
            "count": 1
          },
          {
            "date": "2010-11-23",
            "count": 1
          },
          {
            "date": "2010-12-12",
            "count": 1
          },
          {
            "date": "2011-03-23",
            "count": 1
          },
          {
            "date": "2011-07-02",
            "count": 1
          },
          {
            "date": "2011-07-08",
            "count": 1
          },
          {
            "date": "2011-07-18",
            "count": 1
          },
          {
            "date": "2011-09-09",
            "count": 1
          },
          {
            "date": "2011-09-29",
            "count": 1
          },
          {
            "date": "2011-12-19",
            "count": 1
          },
          {
            "date": "2012-01-12",
            "count": 1
          },
          {
            "date": "2012-02-09",
            "count": 1
          },
          {
            "date": "2012-02-20",
            "count": 1
          },
          {
            "date": "2012-02-22",
            "count": 1
          },
          {
            "date": "2012-03-12",
            "count": 1
          },
          {
            "date": "2012-04-26",
            "count": 1
          },
          {
            "date": "2012-05-10",
            "count": 1
          },
          {
            "date": "2012-05-23",
            "count": 1
          },
          {
            "date": "2012-06-07",
            "count": 1
          },
          {
            "date": "2012-07-08",
            "count": 1
          },
          {
            "date": "2012-08-31",
            "count": 1
          },
          {
            "date": "2012-09-06",
            "count": 1
          },
          {
            "date": "2012-10-25",
            "count": 1
          },
          {
            "date": "2012-11-26",
            "count": 1
          },
          {
            "date": "2012-11-30",
            "count": 1
          },
          {
            "date": "2013-01-23",
            "count": 1
          },
          {
            "date": "2013-01-26",
            "count": 1
          },
          {
            "date": "2013-02-09",
            "count": 1
          },
          {
            "date": "2013-03-26",
            "count": 1
          },
          {
            "date": "2013-04-05",
            "count": 1
          },
          {
            "date": "2013-04-16",
            "count": 1
          },
          {
            "date": "2013-04-26",
            "count": 1
          },
          {
            "date": "2013-05-16",
            "count": 1
          },
          {
            "date": "2013-05-20",
            "count": 1
          },
          {
            "date": "2013-07-10",
            "count": 1
          },
          {
            "date": "2013-07-18",
            "count": 1
          },
          {
            "date": "2013-07-21",
            "count": 1
          },
          {
            "date": "2013-08-20",
            "count": 1
          },
          {
            "date": "2013-10-08",
            "count": 1
          },
          {
            "date": "2013-10-14",
            "count": 1
          },
          {
            "date": "2013-10-15",
            "count": 1
          },
          {
            "date": "2013-11-03",
            "count": 1
          },
          {
            "date": "2013-11-09",
            "count": 1
          },
          {
            "date": "2013-11-30",
            "count": 1
          },
          {
            "date": "2014-01-13",
            "count": 1
          },
          {
            "date": "2014-01-18",
            "count": 1
          },
          {
            "date": "2014-03-10",
            "count": 1
          },
          {
            "date": "2014-03-23",
            "count": 1
          },
          {
            "date": "2014-03-27",
            "count": 1
          },
          {
            "date": "2014-04-13",
            "count": 1
          },
          {
            "date": "2014-04-14",
            "count": 1
          },
          {
            "date": "2014-04-15",
            "count": 1
          },
          {
            "date": "2014-05-07",
            "count": 1
          },
          {
            "date": "2014-05-23",
            "count": 1
          },
          {
            "date": "2014-05-29",
            "count": 1
          },
          {
            "date": "2014-06-18",
            "count": 1
          },
          {
            "date": "2014-08-11",
            "count": 1
          },
          {
            "date": "2014-09-17",
            "count": 1
          },
          {
            "date": "2014-09-22",
            "count": 1
          },
          {
            "date": "2014-10-13",
            "count": 1
          },
          {
            "date": "2014-10-14",
            "count": 1
          },
          {
            "date": "2014-10-23",
            "count": 1
          },
          {
            "date": "2014-10-31",
            "count": 1
          },
          {
            "date": "2014-11-10",
            "count": 1
          },
          {
            "date": "2014-11-12",
            "count": 1
          },
          {
            "date": "2014-11-15",
            "count": 1
          },
          {
            "date": "2014-12-19",
            "count": 1
          },
          {
            "date": "2014-12-29",
            "count": 1
          },
          {
            "date": "2015-01-10",
            "count": 1
          },
          {
            "date": "2015-01-19",
            "count": 1
          },
          {
            "date": "2015-01-29",
            "count": 1
          },
          {
            "date": "2015-01-30",
            "count": 1
          },
          {
            "date": "2015-04-16",
            "count": 1
          },
          {
            "date": "2015-05-05",
            "count": 1
          },
          {
            "date": "2015-05-19",
            "count": 1
          },
          {
            "date": "2015-06-09",
            "count": 1
          },
          {
            "date": "2015-06-26",
            "count": 1
          },
          {
            "date": "2015-08-05",
            "count": 1
          },
          {
            "date": "2015-08-06",
            "count": 1
          },
          {
            "date": "2015-08-29",
            "count": 3
          },
          {
            "date": "2015-09-18",
            "count": 1
          },
          {
            "date": "2015-10-20",
            "count": 1
          },
          {
            "date": "2015-10-28",
            "count": 1
          },
          {
            "date": "2015-11-28",
            "count": 1
          },
          {
            "date": "2015-12-11",
            "count": 1
          },
          {
            "date": "2015-12-18",
            "count": 1
          },
          {
            "date": "2016-01-19",
            "count": 1
          },
          {
            "date": "2016-01-30",
            "count": 1
          },
          {
            "date": "2016-02-17",
            "count": 1
          },
          {
            "date": "2016-03-12",
            "count": 1
          },
          {
            "date": "2016-03-16",
            "count": 1
          },
          {
            "date": "2016-03-30",
            "count": 1
          },
          {
            "date": "2016-04-07",
            "count": 1
          },
          {
            "date": "2016-04-10",
            "count": 1
          },
          {
            "date": "2016-04-14",
            "count": 1
          },
          {
            "date": "2016-05-03",
            "count": 1
          },
          {
            "date": "2016-06-03",
            "count": 2
          },
          {
            "date": "2016-06-06",
            "count": 1
          },
          {
            "date": "2016-06-20",
            "count": 1
          },
          {
            "date": "2016-07-07",
            "count": 1
          },
          {
            "date": "2016-08-08",
            "count": 1
          },
          {
            "date": "2016-09-06",
            "count": 1
          },
          {
            "date": "2016-09-16",
            "count": 1
          },
          {
            "date": "2016-10-05",
            "count": 1
          },
          {
            "date": "2016-10-26",
            "count": 1
          },
          {
            "date": "2016-10-27",
            "count": 1
          },
          {
            "date": "2016-11-06",
            "count": 1
          },
          {
            "date": "2016-11-14",
            "count": 1
          },
          {
            "date": "2016-11-22",
            "count": 1
          },
          {
            "date": "2016-12-30",
            "count": 1
          },
          {
            "date": "2017-02-12",
            "count": 1
          },
          {
            "date": "2017-02-21",
            "count": 1
          },
          {
            "date": "2017-03-03",
            "count": 1
          },
          {
            "date": "2017-04-18",
            "count": 1
          },
          {
            "date": "2017-06-01",
            "count": 1
          },
          {
            "date": "2017-07-16",
            "count": 1
          },
          {
            "date": "2017-07-24",
            "count": 1
          },
          {
            "date": "2017-08-17",
            "count": 1
          },
          {
            "date": "2017-10-11",
            "count": 1
          },
          {
            "date": "2017-11-09",
            "count": 1
          },
          {
            "date": "2017-11-16",
            "count": 1
          },
          {
            "date": "2018-01-20",
            "count": 1
          },
          {
            "date": "2018-01-22",
            "count": 1
          },
          {
            "date": "2018-02-22",
            "count": 1
          },
          {
            "date": "2018-06-13",
            "count": 1
          },
          {
            "date": "2018-06-25",
            "count": 1
          },
          {
            "date": "2018-06-28",
            "count": 1
          },
          {
            "date": "2018-06-29",
            "count": 1
          },
          {
            "date": "2018-07-11",
            "count": 1
          },
          {
            "date": "2018-07-12",
            "count": 1
          },
          {
            "date": "2018-07-27",
            "count": 1
          },
          {
            "date": "2018-07-30",
            "count": 2
          },
          {
            "date": "2018-08-09",
            "count": 2
          },
          {
            "date": "2018-08-23",
            "count": 1
          },
          {
            "date": "2018-09-04",
            "count": 1
          },
          {
            "date": "2018-09-30",
            "count": 1
          },
          {
            "date": "2018-10-11",
            "count": 1
          },
          {
            "date": "2018-10-26",
            "count": 1
          },
          {
            "date": "2018-11-08",
            "count": 1
          },
          {
            "date": "2018-12-20",
            "count": 1
          },
          {
            "date": "2019-01-08",
            "count": 1
          },
          {
            "date": "2019-02-05",
            "count": 1
          },
          {
            "date": "2019-02-20",
            "count": 1
          },
          {
            "date": "2019-02-21",
            "count": 1
          },
          {
            "date": "2019-02-22",
            "count": 1
          },
          {
            "date": "2019-03-03",
            "count": 1
          },
          {
            "date": "2019-03-27",
            "count": 1
          },
          {
            "date": "2019-06-07",
            "count": 1
          },
          {
            "date": "2019-06-15",
            "count": 1
          },
          {
            "date": "2019-06-19",
            "count": 1
          },
          {
            "date": "2019-07-08",
            "count": 1
          },
          {
            "date": "2019-07-12",
            "count": 1
          },
          {
            "date": "2019-07-26",
            "count": 1
          },
          {
            "date": "2019-09-24",
            "count": 1
          },
          {
            "date": "2019-11-19",
            "count": 1
          },
          {
            "date": "2020-01-02",
            "count": 1
          },
          {
            "date": "2020-01-15",
            "count": 1
          },
          {
            "date": "2020-02-13",
            "count": 1
          },
          {
            "date": "2020-03-11",
            "count": 1
          },
          {
            "date": "2020-05-19",
            "count": 1
          },
          {
            "date": "2020-06-26",
            "count": 1
          },
          {
            "date": "2020-08-06",
            "count": 1
          },
          {
            "date": "2020-08-07",
            "count": 1
          },
          {
            "date": "2020-08-24",
            "count": 1
          },
          {
            "date": "2020-09-09",
            "count": 2
          },
          {
            "date": "2020-10-03",
            "count": 1
          },
          {
            "date": "2020-10-05",
            "count": 1
          },
          {
            "date": "2020-10-19",
            "count": 1
          },
          {
            "date": "2020-11-28",
            "count": 1
          },
          {
            "date": "2021-01-31",
            "count": 1
          },
          {
            "date": "2021-03-17",
            "count": 1
          },
          {
            "date": "2021-03-29",
            "count": 2
          },
          {
            "date": "2021-04-12",
            "count": 1
          },
          {
            "date": "2021-05-22",
            "count": 1
          },
          {
            "date": "2021-06-10",
            "count": 1
          },
          {
            "date": "2021-07-22",
            "count": 1
          },
          {
            "date": "2021-08-02",
            "count": 1
          },
          {
            "date": "2021-09-21",
            "count": 1
          },
          {
            "date": "2021-10-05",
            "count": 1
          },
          {
            "date": "2021-10-06",
            "count": 1
          },
          {
            "date": "2021-12-21",
            "count": 1
          },
          {
            "date": "2022-02-09",
            "count": 1
          },
          {
            "date": "2022-04-05",
            "count": 1
          },
          {
            "date": "2022-04-18",
            "count": 1
          },
          {
            "date": "2022-04-19",
            "count": 1
          },
          {
            "date": "2022-06-06",
            "count": 1
          },
          {
            "date": "2022-07-16",
            "count": 1
          },
          {
            "date": "2022-07-18",
            "count": 1
          },
          {
            "date": "2022-08-04",
            "count": 1
          },
          {
            "date": "2022-08-12",
            "count": 1
          },
          {
            "date": "2022-09-23",
            "count": 1
          },
          {
            "date": "2022-10-17",
            "count": 1
          },
          {
            "date": "2022-11-12",
            "count": 1
          },
          {
            "date": "2022-12-28",
            "count": 1
          },
          {
            "date": "2023-02-14",
            "count": 1
          },
          {
            "date": "2023-03-14",
            "count": 1
          },
          {
            "date": "2023-03-29",
            "count": 1
          },
          {
            "date": "2023-04-05",
            "count": 1
          },
          {
            "date": "2023-04-19",
            "count": 1
          },
          {
            "date": "2023-04-28",
            "count": 1
          },
          {
            "date": "2023-05-22",
            "count": 1
          },
          {
            "date": "2023-06-16",
            "count": 1
          },
          {
            "date": "2023-08-14",
            "count": 1
          },
          {
            "date": "2023-09-24",
            "count": 1
          },
          {
            "date": "2023-11-24",
            "count": 1
          },
          {
            "date": "2023-11-27",
            "count": 1
          },
          {
            "date": "2024-01-02",
            "count": 1
          },
          {
            "date": "2024-01-26",
            "count": 1
          },
          {
            "date": "2024-05-14",
            "count": 1
          },
          {
            "date": "2024-05-15",
            "count": 1
          },
          {
            "date": "2024-11-05",
            "count": 1
          },
          {
            "date": "2025-02-04",
            "count": 1
          },
          {
            "date": "2025-11-22",
            "count": 1
          },
          {
            "date": "2026-02-03",
            "count": 1
          },
          {
            "date": "2026-05-23",
            "count": 1
          }
        ],
        "complete": true,
        "collected": 227,
        "total_forks": 241
      },
      "star_history": {
        "days": [
          {
            "date": "2008-12-09",
            "count": 20
          },
          {
            "date": "2009-01-10",
            "count": 1
          },
          {
            "date": "2009-01-13",
            "count": 1
          },
          {
            "date": "2009-01-16",
            "count": 1
          },
          {
            "date": "2009-01-23",
            "count": 1
          },
          {
            "date": "2009-01-26",
            "count": 2
          },
          {
            "date": "2009-02-03",
            "count": 1
          },
          {
            "date": "2009-02-05",
            "count": 1
          },
          {
            "date": "2009-02-08",
            "count": 1
          },
          {
            "date": "2009-02-25",
            "count": 1
          },
          {
            "date": "2009-02-27",
            "count": 1
          },
          {
            "date": "2009-03-16",
            "count": 1
          },
          {
            "date": "2009-04-08",
            "count": 1
          },
          {
            "date": "2009-04-09",
            "count": 1
          },
          {
            "date": "2009-04-29",
            "count": 1
          },
          {
            "date": "2009-05-07",
            "count": 1
          },
          {
            "date": "2009-05-11",
            "count": 1
          },
          {
            "date": "2009-05-15",
            "count": 1
          },
          {
            "date": "2009-06-21",
            "count": 1
          },
          {
            "date": "2009-06-26",
            "count": 1
          },
          {
            "date": "2009-07-03",
            "count": 1
          },
          {
            "date": "2009-07-13",
            "count": 1
          },
          {
            "date": "2009-07-19",
            "count": 1
          },
          {
            "date": "2009-07-20",
            "count": 1
          },
          {
            "date": "2009-08-14",
            "count": 1
          },
          {
            "date": "2009-08-17",
            "count": 1
          },
          {
            "date": "2009-08-28",
            "count": 1
          },
          {
            "date": "2009-08-31",
            "count": 1
          },
          {
            "date": "2009-09-09",
            "count": 1
          },
          {
            "date": "2009-10-06",
            "count": 1
          },
          {
            "date": "2009-10-18",
            "count": 1
          },
          {
            "date": "2009-10-28",
            "count": 1
          },
          {
            "date": "2009-11-02",
            "count": 1
          },
          {
            "date": "2009-11-03",
            "count": 1
          },
          {
            "date": "2009-11-22",
            "count": 1
          },
          {
            "date": "2010-01-03",
            "count": 1
          },
          {
            "date": "2010-01-11",
            "count": 1
          },
          {
            "date": "2010-02-04",
            "count": 1
          },
          {
            "date": "2010-02-16",
            "count": 1
          },
          {
            "date": "2010-02-24",
            "count": 1
          },
          {
            "date": "2010-02-25",
            "count": 1
          },
          {
            "date": "2010-03-03",
            "count": 1
          },
          {
            "date": "2010-03-18",
            "count": 1
          },
          {
            "date": "2010-03-19",
            "count": 1
          },
          {
            "date": "2010-03-21",
            "count": 1
          },
          {
            "date": "2010-03-22",
            "count": 1
          },
          {
            "date": "2010-03-29",
            "count": 1
          },
          {
            "date": "2010-04-15",
            "count": 1
          },
          {
            "date": "2010-04-23",
            "count": 1
          },
          {
            "date": "2010-04-29",
            "count": 1
          },
          {
            "date": "2010-06-08",
            "count": 1
          },
          {
            "date": "2010-06-18",
            "count": 1
          },
          {
            "date": "2010-07-02",
            "count": 1
          },
          {
            "date": "2010-07-10",
            "count": 1
          },
          {
            "date": "2010-07-16",
            "count": 1
          },
          {
            "date": "2010-07-20",
            "count": 1
          },
          {
            "date": "2010-07-21",
            "count": 1
          },
          {
            "date": "2010-08-30",
            "count": 1
          },
          {
            "date": "2010-09-24",
            "count": 1
          },
          {
            "date": "2010-09-28",
            "count": 2
          },
          {
            "date": "2010-10-08",
            "count": 1
          },
          {
            "date": "2010-10-10",
            "count": 1
          },
          {
            "date": "2010-10-17",
            "count": 1
          },
          {
            "date": "2010-10-25",
            "count": 1
          },
          {
            "date": "2010-11-02",
            "count": 1
          },
          {
            "date": "2010-11-06",
            "count": 1
          },
          {
            "date": "2010-11-30",
            "count": 1
          },
          {
            "date": "2010-12-02",
            "count": 1
          },
          {
            "date": "2010-12-21",
            "count": 1
          },
          {
            "date": "2011-01-02",
            "count": 1
          },
          {
            "date": "2011-01-26",
            "count": 2
          },
          {
            "date": "2011-01-31",
            "count": 1
          },
          {
            "date": "2011-02-09",
            "count": 1
          },
          {
            "date": "2011-02-12",
            "count": 1
          },
          {
            "date": "2011-02-13",
            "count": 1
          },
          {
            "date": "2011-02-17",
            "count": 1
          },
          {
            "date": "2011-03-04",
            "count": 2
          },
          {
            "date": "2011-03-08",
            "count": 1
          },
          {
            "date": "2011-03-14",
            "count": 1
          },
          {
            "date": "2011-03-20",
            "count": 1
          },
          {
            "date": "2011-03-21",
            "count": 1
          },
          {
            "date": "2011-03-23",
            "count": 1
          },
          {
            "date": "2011-04-05",
            "count": 1
          },
          {
            "date": "2011-04-19",
            "count": 1
          },
          {
            "date": "2011-05-16",
            "count": 1
          },
          {
            "date": "2011-05-22",
            "count": 1
          },
          {
            "date": "2011-06-12",
            "count": 1
          },
          {
            "date": "2011-06-25",
            "count": 1
          },
          {
            "date": "2011-06-30",
            "count": 1
          },
          {
            "date": "2011-07-18",
            "count": 1
          },
          {
            "date": "2011-08-01",
            "count": 1
          },
          {
            "date": "2011-08-15",
            "count": 1
          },
          {
            "date": "2011-09-10",
            "count": 1
          },
          {
            "date": "2011-09-28",
            "count": 1
          },
          {
            "date": "2011-09-30",
            "count": 1
          },
          {
            "date": "2011-10-01",
            "count": 1
          },
          {
            "date": "2011-10-04",
            "count": 1
          },
          {
            "date": "2011-10-05",
            "count": 1
          },
          {
            "date": "2011-10-13",
            "count": 1
          },
          {
            "date": "2011-10-22",
            "count": 1
          },
          {
            "date": "2011-11-02",
            "count": 1
          },
          {
            "date": "2011-11-26",
            "count": 1
          },
          {
            "date": "2011-12-01",
            "count": 1
          },
          {
            "date": "2011-12-13",
            "count": 1
          },
          {
            "date": "2011-12-28",
            "count": 1
          },
          {
            "date": "2012-01-03",
            "count": 1
          },
          {
            "date": "2012-02-07",
            "count": 1
          },
          {
            "date": "2012-02-08",
            "count": 1
          },
          {
            "date": "2012-02-20",
            "count": 1
          },
          {
            "date": "2012-02-22",
            "count": 1
          },
          {
            "date": "2012-03-05",
            "count": 1
          },
          {
            "date": "2012-03-17",
            "count": 1
          },
          {
            "date": "2012-04-16",
            "count": 1
          },
          {
            "date": "2012-04-21",
            "count": 1
          },
          {
            "date": "2012-05-07",
            "count": 1
          },
          {
            "date": "2012-05-29",
            "count": 1
          },
          {
            "date": "2012-06-13",
            "count": 1
          },
          {
            "date": "2012-07-30",
            "count": 1
          },
          {
            "date": "2012-09-12",
            "count": 1
          },
          {
            "date": "2013-01-16",
            "count": 1
          },
          {
            "date": "2013-03-06",
            "count": 1
          },
          {
            "date": "2013-04-02",
            "count": 1
          },
          {
            "date": "2013-04-25",
            "count": 1
          },
          {
            "date": "2013-04-30",
            "count": 1
          },
          {
            "date": "2013-05-07",
            "count": 1
          },
          {
            "date": "2013-05-09",
            "count": 1
          },
          {
            "date": "2013-05-10",
            "count": 1
          },
          {
            "date": "2013-05-16",
            "count": 1
          },
          {
            "date": "2013-05-20",
            "count": 1
          },
          {
            "date": "2013-05-24",
            "count": 2
          },
          {
            "date": "2013-06-03",
            "count": 1
          },
          {
            "date": "2013-07-17",
            "count": 3
          },
          {
            "date": "2013-07-20",
            "count": 1
          },
          {
            "date": "2013-07-28",
            "count": 1
          },
          {
            "date": "2013-08-12",
            "count": 1
          },
          {
            "date": "2013-08-13",
            "count": 1
          },
          {
            "date": "2013-08-14",
            "count": 1
          },
          {
            "date": "2013-09-08",
            "count": 1
          },
          {
            "date": "2013-09-26",
            "count": 1
          },
          {
            "date": "2013-10-27",
            "count": 1
          },
          {
            "date": "2013-11-01",
            "count": 1
          },
          {
            "date": "2013-11-09",
            "count": 1
          },
          {
            "date": "2013-11-26",
            "count": 1
          },
          {
            "date": "2013-12-02",
            "count": 1
          },
          {
            "date": "2013-12-08",
            "count": 1
          },
          {
            "date": "2013-12-10",
            "count": 1
          },
          {
            "date": "2014-01-13",
            "count": 2
          },
          {
            "date": "2014-01-15",
            "count": 1
          },
          {
            "date": "2014-01-26",
            "count": 1
          },
          {
            "date": "2014-02-10",
            "count": 1
          },
          {
            "date": "2014-02-23",
            "count": 1
          },
          {
            "date": "2014-02-28",
            "count": 1
          },
          {
            "date": "2014-03-13",
            "count": 1
          },
          {
            "date": "2014-03-19",
            "count": 1
          },
          {
            "date": "2014-03-26",
            "count": 1
          },
          {
            "date": "2014-03-27",
            "count": 2
          },
          {
            "date": "2014-04-07",
            "count": 1
          },
          {
            "date": "2014-04-24",
            "count": 2
          },
          {
            "date": "2014-04-29",
            "count": 1
          },
          {
            "date": "2014-05-02",
            "count": 1
          },
          {
            "date": "2014-05-07",
            "count": 1
          },
          {
            "date": "2014-05-15",
            "count": 1
          },
          {
            "date": "2014-05-16",
            "count": 1
          },
          {
            "date": "2014-05-26",
            "count": 2
          },
          {
            "date": "2014-06-10",
            "count": 1
          },
          {
            "date": "2014-06-22",
            "count": 1
          },
          {
            "date": "2014-06-27",
            "count": 1
          },
          {
            "date": "2014-07-09",
            "count": 1
          },
          {
            "date": "2014-07-10",
            "count": 1
          },
          {
            "date": "2014-07-13",
            "count": 1
          },
          {
            "date": "2014-07-14",
            "count": 1
          },
          {
            "date": "2014-07-24",
            "count": 1
          },
          {
            "date": "2014-08-01",
            "count": 1
          },
          {
            "date": "2014-08-31",
            "count": 1
          },
          {
            "date": "2014-09-20",
            "count": 1
          },
          {
            "date": "2014-09-29",
            "count": 1
          },
          {
            "date": "2014-09-30",
            "count": 1
          },
          {
            "date": "2014-10-05",
            "count": 1
          },
          {
            "date": "2014-10-10",
            "count": 1
          },
          {
            "date": "2014-10-21",
            "count": 1
          },
          {
            "date": "2014-10-24",
            "count": 1
          },
          {
            "date": "2014-11-05",
            "count": 1
          },
          {
            "date": "2014-11-11",
            "count": 1
          },
          {
            "date": "2014-11-12",
            "count": 1
          },
          {
            "date": "2014-11-13",
            "count": 1
          },
          {
            "date": "2014-11-15",
            "count": 1
          },
          {
            "date": "2014-12-04",
            "count": 1
          },
          {
            "date": "2014-12-07",
            "count": 1
          },
          {
            "date": "2014-12-11",
            "count": 1
          },
          {
            "date": "2015-01-04",
            "count": 1
          },
          {
            "date": "2015-01-05",
            "count": 1
          },
          {
            "date": "2015-01-15",
            "count": 1
          },
          {
            "date": "2015-01-20",
            "count": 2
          },
          {
            "date": "2015-01-25",
            "count": 1
          },
          {
            "date": "2015-01-27",
            "count": 1
          },
          {
            "date": "2015-01-29",
            "count": 1
          },
          {
            "date": "2015-02-10",
            "count": 1
          },
          {
            "date": "2015-02-14",
            "count": 1
          },
          {
            "date": "2015-02-20",
            "count": 1
          },
          {
            "date": "2015-03-02",
            "count": 1
          },
          {
            "date": "2015-03-06",
            "count": 1
          },
          {
            "date": "2015-04-06",
            "count": 1
          },
          {
            "date": "2015-04-11",
            "count": 1
          },
          {
            "date": "2015-05-04",
            "count": 1
          },
          {
            "date": "2015-05-12",
            "count": 1
          },
          {
            "date": "2015-06-11",
            "count": 1
          },
          {
            "date": "2015-06-17",
            "count": 1
          },
          {
            "date": "2015-06-29",
            "count": 1
          },
          {
            "date": "2015-07-07",
            "count": 1
          },
          {
            "date": "2015-07-21",
            "count": 1
          },
          {
            "date": "2015-08-07",
            "count": 1
          },
          {
            "date": "2015-08-10",
            "count": 1
          },
          {
            "date": "2015-08-11",
            "count": 1
          },
          {
            "date": "2015-08-12",
            "count": 1
          },
          {
            "date": "2015-08-17",
            "count": 1
          },
          {
            "date": "2015-08-26",
            "count": 1
          },
          {
            "date": "2015-08-28",
            "count": 1
          },
          {
            "date": "2015-09-12",
            "count": 1
          },
          {
            "date": "2015-09-29",
            "count": 1
          },
          {
            "date": "2015-10-05",
            "count": 1
          },
          {
            "date": "2015-10-12",
            "count": 1
          },
          {
            "date": "2015-10-14",
            "count": 1
          },
          {
            "date": "2015-10-27",
            "count": 1
          },
          {
            "date": "2015-10-30",
            "count": 1
          },
          {
            "date": "2015-11-05",
            "count": 1
          },
          {
            "date": "2015-11-09",
            "count": 1
          },
          {
            "date": "2015-11-20",
            "count": 1
          },
          {
            "date": "2015-11-27",
            "count": 1
          },
          {
            "date": "2015-11-28",
            "count": 2
          },
          {
            "date": "2015-12-09",
            "count": 1
          },
          {
            "date": "2015-12-15",
            "count": 1
          },
          {
            "date": "2015-12-22",
            "count": 1
          },
          {
            "date": "2016-01-04",
            "count": 1
          },
          {
            "date": "2016-01-08",
            "count": 1
          },
          {
            "date": "2016-01-09",
            "count": 1
          },
          {
            "date": "2016-01-19",
            "count": 1
          },
          {
            "date": "2016-02-05",
            "count": 1
          },
          {
            "date": "2016-02-11",
            "count": 1
          },
          {
            "date": "2016-02-22",
            "count": 1
          },
          {
            "date": "2016-03-04",
            "count": 1
          },
          {
            "date": "2016-03-05",
            "count": 1
          },
          {
            "date": "2016-03-08",
            "count": 1
          },
          {
            "date": "2016-03-16",
            "count": 1
          },
          {
            "date": "2016-04-06",
            "count": 1
          },
          {
            "date": "2016-04-09",
            "count": 1
          },
          {
            "date": "2016-04-12",
            "count": 1
          },
          {
            "date": "2016-04-14",
            "count": 1
          },
          {
            "date": "2016-05-18",
            "count": 2
          },
          {
            "date": "2016-05-19",
            "count": 1
          },
          {
            "date": "2016-06-02",
            "count": 1
          },
          {
            "date": "2016-06-07",
            "count": 1
          },
          {
            "date": "2016-06-21",
            "count": 1
          },
          {
            "date": "2016-07-14",
            "count": 1
          },
          {
            "date": "2016-07-18",
            "count": 1
          },
          {
            "date": "2016-08-18",
            "count": 1
          },
          {
            "date": "2016-08-19",
            "count": 1
          },
          {
            "date": "2016-08-27",
            "count": 1
          },
          {
            "date": "2016-09-07",
            "count": 1
          },
          {
            "date": "2016-09-09",
            "count": 1
          },
          {
            "date": "2016-09-10",
            "count": 1
          },
          {
            "date": "2016-09-12",
            "count": 1
          },
          {
            "date": "2016-09-15",
            "count": 1
          },
          {
            "date": "2016-09-23",
            "count": 1
          },
          {
            "date": "2016-10-06",
            "count": 4
          },
          {
            "date": "2016-10-13",
            "count": 1
          },
          {
            "date": "2016-10-14",
            "count": 1
          },
          {
            "date": "2016-10-20",
            "count": 1
          },
          {
            "date": "2016-10-26",
            "count": 1
          },
          {
            "date": "2016-11-09",
            "count": 1
          },
          {
            "date": "2016-11-22",
            "count": 1
          },
          {
            "date": "2016-11-28",
            "count": 1
          },
          {
            "date": "2016-12-14",
            "count": 1
          },
          {
            "date": "2016-12-20",
            "count": 1
          },
          {
            "date": "2016-12-21",
            "count": 1
          },
          {
            "date": "2017-01-03",
            "count": 1
          },
          {
            "date": "2017-01-15",
            "count": 1
          },
          {
            "date": "2017-01-20",
            "count": 1
          },
          {
            "date": "2017-02-21",
            "count": 1
          },
          {
            "date": "2017-02-22",
            "count": 1
          },
          {
            "date": "2017-02-25",
            "count": 1
          },
          {
            "date": "2017-03-12",
            "count": 1
          },
          {
            "date": "2017-03-20",
            "count": 1
          },
          {
            "date": "2017-03-22",
            "count": 1
          },
          {
            "date": "2017-03-31",
            "count": 1
          },
          {
            "date": "2017-04-20",
            "count": 1
          },
          {
            "date": "2017-04-25",
            "count": 1
          },
          {
            "date": "2017-04-27",
            "count": 2
          },
          {
            "date": "2017-04-30",
            "count": 1
          },
          {
            "date": "2017-05-13",
            "count": 1
          },
          {
            "date": "2017-05-16",
            "count": 1
          },
          {
            "date": "2017-05-17",
            "count": 1
          },
          {
            "date": "2017-06-30",
            "count": 1
          },
          {
            "date": "2017-07-10",
            "count": 1
          },
          {
            "date": "2017-07-12",
            "count": 1
          },
          {
            "date": "2017-07-15",
            "count": 1
          },
          {
            "date": "2017-07-16",
            "count": 2
          },
          {
            "date": "2017-07-17",
            "count": 1
          },
          {
            "date": "2017-07-22",
            "count": 3
          },
          {
            "date": "2017-07-23",
            "count": 5
          },
          {
            "date": "2017-07-24",
            "count": 2
          },
          {
            "date": "2017-07-25",
            "count": 2
          },
          {
            "date": "2017-07-26",
            "count": 2
          },
          {
            "date": "2017-08-13",
            "count": 1
          },
          {
            "date": "2017-08-23",
            "count": 1
          },
          {
            "date": "2017-09-04",
            "count": 1
          },
          {
            "date": "2017-09-09",
            "count": 1
          },
          {
            "date": "2017-09-12",
            "count": 1
          },
          {
            "date": "2017-09-18",
            "count": 1
          },
          {
            "date": "2017-10-01",
            "count": 1
          },
          {
            "date": "2017-10-08",
            "count": 1
          },
          {
            "date": "2017-10-20",
            "count": 1
          },
          {
            "date": "2017-10-30",
            "count": 1
          },
          {
            "date": "2017-11-09",
            "count": 1
          },
          {
            "date": "2017-11-19",
            "count": 1
          },
          {
            "date": "2017-12-09",
            "count": 1
          },
          {
            "date": "2017-12-12",
            "count": 1
          },
          {
            "date": "2017-12-13",
            "count": 1
          },
          {
            "date": "2017-12-19",
            "count": 1
          },
          {
            "date": "2017-12-25",
            "count": 1
          },
          {
            "date": "2017-12-29",
            "count": 1
          },
          {
            "date": "2018-01-20",
            "count": 1
          },
          {
            "date": "2018-01-23",
            "count": 1
          },
          {
            "date": "2018-01-24",
            "count": 1
          },
          {
            "date": "2018-01-29",
            "count": 1
          },
          {
            "date": "2018-02-03",
            "count": 1
          },
          {
            "date": "2018-02-20",
            "count": 1
          },
          {
            "date": "2018-02-21",
            "count": 1
          },
          {
            "date": "2018-03-19",
            "count": 1
          },
          {
            "date": "2018-04-26",
            "count": 1
          },
          {
            "date": "2018-04-30",
            "count": 1
          },
          {
            "date": "2018-05-23",
            "count": 1
          },
          {
            "date": "2018-05-31",
            "count": 1
          },
          {
            "date": "2018-06-25",
            "count": 2
          },
          {
            "date": "2018-07-05",
            "count": 1
          },
          {
            "date": "2018-07-07",
            "count": 2
          },
          {
            "date": "2018-07-11",
            "count": 2
          },
          {
            "date": "2018-07-30",
            "count": 1
          },
          {
            "date": "2018-08-01",
            "count": 1
          },
          {
            "date": "2018-08-03",
            "count": 1
          },
          {
            "date": "2018-08-04",
            "count": 1
          },
          {
            "date": "2018-08-11",
            "count": 1
          },
          {
            "date": "2018-08-26",
            "count": 1
          },
          {
            "date": "2018-09-04",
            "count": 1
          },
          {
            "date": "2018-09-20",
            "count": 1
          },
          {
            "date": "2018-09-28",
            "count": 1
          },
          {
            "date": "2018-10-04",
            "count": 1
          },
          {
            "date": "2018-10-13",
            "count": 1
          },
          {
            "date": "2018-10-24",
            "count": 1
          },
          {
            "date": "2018-11-13",
            "count": 1
          },
          {
            "date": "2018-11-16",
            "count": 1
          },
          {
            "date": "2018-11-21",
            "count": 1
          },
          {
            "date": "2018-12-14",
            "count": 1
          },
          {
            "date": "2018-12-29",
            "count": 1
          },
          {
            "date": "2019-01-01",
            "count": 1
          },
          {
            "date": "2019-01-25",
            "count": 2
          },
          {
            "date": "2019-01-31",
            "count": 1
          },
          {
            "date": "2019-02-08",
            "count": 1
          },
          {
            "date": "2019-02-13",
            "count": 1
          },
          {
            "date": "2019-02-18",
            "count": 2
          },
          {
            "date": "2019-02-21",
            "count": 1
          },
          {
            "date": "2019-03-01",
            "count": 1
          },
          {
            "date": "2019-03-08",
            "count": 1
          },
          {
            "date": "2019-03-09",
            "count": 1
          },
          {
            "date": "2019-03-11",
            "count": 1
          },
          {
            "date": "2019-03-20",
            "count": 1
          },
          {
            "date": "2019-04-11",
            "count": 1
          },
          {
            "date": "2019-04-18",
            "count": 1
          },
          {
            "date": "2019-05-15",
            "count": 2
          },
          {
            "date": "2019-06-05",
            "count": 1
          },
          {
            "date": "2019-06-13",
            "count": 1
          },
          {
            "date": "2019-06-15",
            "count": 1
          },
          {
            "date": "2019-06-26",
            "count": 1
          },
          {
            "date": "2019-07-12",
            "count": 1
          },
          {
            "date": "2019-07-24",
            "count": 1
          },
          {
            "date": "2019-08-12",
            "count": 1
          },
          {
            "date": "2019-08-22",
            "count": 1
          },
          {
            "date": "2019-08-28",
            "count": 1
          },
          {
            "date": "2019-09-13",
            "count": 1
          },
          {
            "date": "2019-09-26",
            "count": 1
          },
          {
            "date": "2019-10-14",
            "count": 1
          },
          {
            "date": "2019-10-23",
            "count": 1
          },
          {
            "date": "2019-11-08",
            "count": 1
          },
          {
            "date": "2019-12-19",
            "count": 1
          },
          {
            "date": "2019-12-27",
            "count": 1
          },
          {
            "date": "2020-01-02",
            "count": 1
          },
          {
            "date": "2020-01-11",
            "count": 1
          },
          {
            "date": "2020-01-15",
            "count": 1
          },
          {
            "date": "2020-01-22",
            "count": 1
          },
          {
            "date": "2020-01-29",
            "count": 1
          },
          {
            "date": "2020-02-05",
            "count": 1
          },
          {
            "date": "2020-02-25",
            "count": 1
          },
          {
            "date": "2020-02-26",
            "count": 1
          },
          {
            "date": "2020-03-25",
            "count": 1
          },
          {
            "date": "2020-03-26",
            "count": 1
          },
          {
            "date": "2020-03-31",
            "count": 1
          },
          {
            "date": "2020-04-11",
            "count": 1
          },
          {
            "date": "2020-04-23",
            "count": 1
          },
          {
            "date": "2020-04-25",
            "count": 1
          },
          {
            "date": "2020-05-01",
            "count": 1
          },
          {
            "date": "2020-05-08",
            "count": 2
          },
          {
            "date": "2020-05-19",
            "count": 1
          },
          {
            "date": "2020-06-21",
            "count": 1
          },
          {
            "date": "2020-07-31",
            "count": 1
          },
          {
            "date": "2020-08-25",
            "count": 1
          },
          {
            "date": "2020-09-22",
            "count": 1
          },
          {
            "date": "2020-10-03",
            "count": 1
          },
          {
            "date": "2020-10-05",
            "count": 1
          },
          {
            "date": "2020-10-10",
            "count": 1
          },
          {
            "date": "2020-10-11",
            "count": 1
          },
          {
            "date": "2020-10-22",
            "count": 1
          },
          {
            "date": "2020-10-23",
            "count": 1
          },
          {
            "date": "2020-10-29",
            "count": 1
          },
          {
            "date": "2020-11-09",
            "count": 1
          },
          {
            "date": "2020-11-19",
            "count": 1
          },
          {
            "date": "2020-11-28",
            "count": 1
          },
          {
            "date": "2020-12-25",
            "count": 1
          },
          {
            "date": "2020-12-27",
            "count": 1
          },
          {
            "date": "2021-01-03",
            "count": 1
          },
          {
            "date": "2021-01-12",
            "count": 1
          },
          {
            "date": "2021-01-31",
            "count": 1
          },
          {
            "date": "2021-02-04",
            "count": 1
          },
          {
            "date": "2021-02-06",
            "count": 1
          },
          {
            "date": "2021-02-10",
            "count": 1
          },
          {
            "date": "2021-02-11",
            "count": 1
          },
          {
            "date": "2021-02-21",
            "count": 1
          },
          {
            "date": "2021-03-12",
            "count": 1
          },
          {
            "date": "2021-03-15",
            "count": 1
          },
          {
            "date": "2021-03-16",
            "count": 1
          },
          {
            "date": "2021-03-19",
            "count": 1
          },
          {
            "date": "2021-03-27",
            "count": 1
          },
          {
            "date": "2021-04-07",
            "count": 1
          },
          {
            "date": "2021-04-29",
            "count": 1
          },
          {
            "date": "2021-05-14",
            "count": 1
          },
          {
            "date": "2021-06-29",
            "count": 1
          },
          {
            "date": "2021-07-01",
            "count": 1
          },
          {
            "date": "2021-07-18",
            "count": 1
          },
          {
            "date": "2021-07-26",
            "count": 1
          },
          {
            "date": "2021-08-02",
            "count": 1
          },
          {
            "date": "2021-08-11",
            "count": 1
          },
          {
            "date": "2021-08-20",
            "count": 1
          },
          {
            "date": "2021-09-17",
            "count": 1
          },
          {
            "date": "2021-09-20",
            "count": 1
          },
          {
            "date": "2021-10-01",
            "count": 1
          },
          {
            "date": "2021-10-10",
            "count": 1
          },
          {
            "date": "2021-10-11",
            "count": 1
          },
          {
            "date": "2021-10-12",
            "count": 2
          },
          {
            "date": "2021-10-15",
            "count": 1
          },
          {
            "date": "2021-10-17",
            "count": 1
          },
          {
            "date": "2021-10-18",
            "count": 1
          },
          {
            "date": "2021-10-24",
            "count": 1
          },
          {
            "date": "2021-11-10",
            "count": 1
          },
          {
            "date": "2021-11-11",
            "count": 1
          },
          {
            "date": "2021-11-12",
            "count": 1
          },
          {
            "date": "2021-11-21",
            "count": 1
          },
          {
            "date": "2021-11-23",
            "count": 1
          },
          {
            "date": "2021-11-27",
            "count": 1
          },
          {
            "date": "2021-11-29",
            "count": 2
          },
          {
            "date": "2021-12-16",
            "count": 1
          },
          {
            "date": "2021-12-17",
            "count": 1
          },
          {
            "date": "2021-12-28",
            "count": 1
          },
          {
            "date": "2022-01-03",
            "count": 1
          },
          {
            "date": "2022-01-08",
            "count": 1
          },
          {
            "date": "2022-01-18",
            "count": 2
          },
          {
            "date": "2022-02-03",
            "count": 1
          },
          {
            "date": "2022-03-25",
            "count": 1
          },
          {
            "date": "2022-04-03",
            "count": 1
          },
          {
            "date": "2022-04-10",
            "count": 1
          },
          {
            "date": "2022-04-11",
            "count": 1
          },
          {
            "date": "2022-04-12",
            "count": 1
          },
          {
            "date": "2022-04-18",
            "count": 1
          },
          {
            "date": "2022-05-04",
            "count": 1
          },
          {
            "date": "2022-05-26",
            "count": 1
          },
          {
            "date": "2022-06-01",
            "count": 1
          },
          {
            "date": "2022-07-08",
            "count": 1
          },
          {
            "date": "2022-08-03",
            "count": 1
          },
          {
            "date": "2022-08-13",
            "count": 1
          },
          {
            "date": "2022-08-27",
            "count": 1
          },
          {
            "date": "2022-09-07",
            "count": 2
          },
          {
            "date": "2022-09-08",
            "count": 1
          },
          {
            "date": "2022-09-14",
            "count": 1
          },
          {
            "date": "2022-09-26",
            "count": 1
          },
          {
            "date": "2022-10-09",
            "count": 1
          },
          {
            "date": "2022-10-19",
            "count": 1
          },
          {
            "date": "2022-10-20",
            "count": 1
          },
          {
            "date": "2022-10-21",
            "count": 1
          },
          {
            "date": "2022-11-11",
            "count": 1
          },
          {
            "date": "2022-11-20",
            "count": 1
          },
          {
            "date": "2022-11-22",
            "count": 1
          },
          {
            "date": "2022-11-30",
            "count": 1
          },
          {
            "date": "2022-12-24",
            "count": 1
          },
          {
            "date": "2023-01-03",
            "count": 1
          },
          {
            "date": "2023-01-09",
            "count": 1
          },
          {
            "date": "2023-01-12",
            "count": 1
          },
          {
            "date": "2023-01-22",
            "count": 1
          },
          {
            "date": "2023-02-27",
            "count": 1
          },
          {
            "date": "2023-03-14",
            "count": 1
          },
          {
            "date": "2023-03-23",
            "count": 1
          },
          {
            "date": "2023-03-30",
            "count": 1
          },
          {
            "date": "2023-04-04",
            "count": 1
          },
          {
            "date": "2023-04-07",
            "count": 1
          },
          {
            "date": "2023-04-11",
            "count": 1
          },
          {
            "date": "2023-05-17",
            "count": 1
          },
          {
            "date": "2023-05-22",
            "count": 1
          },
          {
            "date": "2023-05-30",
            "count": 1
          },
          {
            "date": "2023-06-25",
            "count": 1
          },
          {
            "date": "2023-07-18",
            "count": 1
          },
          {
            "date": "2023-08-28",
            "count": 1
          },
          {
            "date": "2023-09-05",
            "count": 1
          },
          {
            "date": "2023-09-12",
            "count": 1
          },
          {
            "date": "2023-09-28",
            "count": 1
          },
          {
            "date": "2023-10-06",
            "count": 1
          },
          {
            "date": "2023-10-13",
            "count": 1
          },
          {
            "date": "2023-10-20",
            "count": 1
          },
          {
            "date": "2023-11-08",
            "count": 1
          },
          {
            "date": "2023-11-24",
            "count": 1
          },
          {
            "date": "2023-12-05",
            "count": 1
          },
          {
            "date": "2023-12-15",
            "count": 2
          },
          {
            "date": "2023-12-20",
            "count": 1
          },
          {
            "date": "2023-12-30",
            "count": 1
          },
          {
            "date": "2024-01-12",
            "count": 1
          },
          {
            "date": "2024-01-30",
            "count": 1
          },
          {
            "date": "2024-02-08",
            "count": 1
          },
          {
            "date": "2024-02-12",
            "count": 1
          },
          {
            "date": "2024-02-18",
            "count": 1
          },
          {
            "date": "2024-02-26",
            "count": 1
          },
          {
            "date": "2024-03-20",
            "count": 1
          },
          {
            "date": "2024-03-24",
            "count": 1
          },
          {
            "date": "2024-03-30",
            "count": 1
          },
          {
            "date": "2024-04-03",
            "count": 1
          },
          {
            "date": "2024-04-26",
            "count": 1
          },
          {
            "date": "2024-05-15",
            "count": 1
          },
          {
            "date": "2024-06-16",
            "count": 1
          },
          {
            "date": "2024-06-18",
            "count": 1
          },
          {
            "date": "2024-07-06",
            "count": 1
          },
          {
            "date": "2024-07-10",
            "count": 1
          },
          {
            "date": "2024-07-11",
            "count": 1
          },
          {
            "date": "2024-07-12",
            "count": 1
          },
          {
            "date": "2024-07-13",
            "count": 1
          },
          {
            "date": "2024-07-16",
            "count": 1
          },
          {
            "date": "2024-08-18",
            "count": 1
          },
          {
            "date": "2024-09-09",
            "count": 1
          },
          {
            "date": "2024-09-11",
            "count": 1
          },
          {
            "date": "2024-09-25",
            "count": 1
          },
          {
            "date": "2024-09-28",
            "count": 1
          },
          {
            "date": "2024-09-29",
            "count": 1
          },
          {
            "date": "2024-10-10",
            "count": 1
          },
          {
            "date": "2024-11-07",
            "count": 1
          },
          {
            "date": "2024-12-05",
            "count": 1
          },
          {
            "date": "2024-12-07",
            "count": 1
          },
          {
            "date": "2025-02-01",
            "count": 1
          },
          {
            "date": "2025-02-21",
            "count": 1
          },
          {
            "date": "2025-02-27",
            "count": 1
          },
          {
            "date": "2025-03-10",
            "count": 1
          },
          {
            "date": "2025-03-11",
            "count": 1
          },
          {
            "date": "2025-03-18",
            "count": 1
          },
          {
            "date": "2025-03-21",
            "count": 1
          },
          {
            "date": "2025-04-01",
            "count": 1
          },
          {
            "date": "2025-05-07",
            "count": 1
          },
          {
            "date": "2025-05-27",
            "count": 1
          },
          {
            "date": "2025-07-10",
            "count": 1
          },
          {
            "date": "2025-07-16",
            "count": 1
          },
          {
            "date": "2025-07-22",
            "count": 1
          },
          {
            "date": "2025-08-17",
            "count": 1
          },
          {
            "date": "2025-08-19",
            "count": 1
          },
          {
            "date": "2025-08-25",
            "count": 1
          },
          {
            "date": "2025-08-29",
            "count": 1
          },
          {
            "date": "2025-09-21",
            "count": 1
          },
          {
            "date": "2025-09-30",
            "count": 1
          },
          {
            "date": "2025-10-05",
            "count": 1
          },
          {
            "date": "2025-10-26",
            "count": 1
          },
          {
            "date": "2025-11-02",
            "count": 2
          },
          {
            "date": "2025-11-05",
            "count": 1
          },
          {
            "date": "2025-11-21",
            "count": 1
          },
          {
            "date": "2025-11-25",
            "count": 1
          },
          {
            "date": "2025-11-26",
            "count": 5
          },
          {
            "date": "2025-12-31",
            "count": 1
          },
          {
            "date": "2026-04-24",
            "count": 1
          },
          {
            "date": "2026-05-12",
            "count": 1
          },
          {
            "date": "2026-07-07",
            "count": 1
          }
        ],
        "complete": true,
        "collected": 643,
        "total_stars": 644
      },
      "open_issues_and_prs": 20
    },
    "ai_readiness": {
      "has_nix": false,
      "example_dirs": [
        "examples",
        "notebooks"
      ],
      "has_llms_txt": false,
      "has_dockerfile": false,
      "has_mcp_signal": false,
      "bootstrap_files": [
        "abstracts/bosc_2015_bcbio_prioritization/Makefile",
        "abstracts/bosc_2016_bcbio_cwl/Makefile",
        "abstracts/bosc_2017_bcbio_integration/Makefile",
        "abstracts/bosc_2018_bcbio_validation/Makefile",
        "abstracts/hackathon_workshop_2017/Makefile",
        "nextgen/docs/Makefile",
        "papers/bcbio-nextgen/Makefile"
      ],
      "api_schema_files": [],
      "has_devcontainer": false,
      "typecheck_configs": [],
      "toolchain_manifests": [],
      "largest_source_bytes": 70319,
      "source_files_sampled": 186,
      "oversized_source_files": 1,
      "agent_instruction_files": [],
      "agent_instruction_max_bytes": null
    },
    "dependencies": {
      "manifests": [
        "distblast/setup.py",
        "gff/setup.py"
      ],
      "advisories": {
        "error": null,
        "scope": "published_package",
        "source": "osv",
        "findings": [],
        "collected": true,
        "malicious": [],
        "truncated": false,
        "by_severity": {},
        "advisory_count": 0,
        "affected_count": 0,
        "assessed_count": 3,
        "malicious_count": 0,
        "assessed_package": "pypi:bcbio-gff@0.7.1",
        "unassessed_count": 0,
        "direct_affected_count": 0
      },
      "ecosystems": [
        "pypi"
      ],
      "dependencies": [],
      "all_dependencies": {
        "error": null,
        "source": "github-sbom",
        "packages": [
          {
            "name": "biopython",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "pyyaml",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          },
          {
            "name": "six",
            "direct": false,
            "version": null,
            "ecosystem": "pypi"
          }
        ],
        "collected": true,
        "truncated": false,
        "total_count": 3,
        "direct_count": 0,
        "indirect_count": 3
      }
    },
    "maintainership": {
      "issues": {
        "open_prs": 2,
        "merged_prs": 46,
        "open_issues": 18,
        "closed_ratio": 0.775,
        "closed_issues": 62,
        "closed_unmerged_prs": 21
      },
      "bus_factor": 1,
      "bot_contributors": 0,
      "top_contributors": [
        {
          "type": "User",
          "login": "chapmanb",
          "commits": 1217,
          "avatar_url": "https://avatars.githubusercontent.com/u/39391?v=4"
        },
        {
          "type": "User",
          "login": "brainstorm",
          "commits": 45,
          "avatar_url": "https://avatars.githubusercontent.com/u/175587?v=4"
        },
        {
          "type": "User",
          "login": "roryk",
          "commits": 43,
          "avatar_url": "https://avatars.githubusercontent.com/u/414586?v=4"
        },
        {
          "type": "User",
          "login": "vals",
          "commits": 7,
          "avatar_url": "https://avatars.githubusercontent.com/u/668803?v=4"
        },
        {
          "type": "User",
          "login": "peterjc",
          "commits": 6,
          "avatar_url": "https://avatars.githubusercontent.com/u/63959?v=4"
        },
        {
          "type": "User",
          "login": "khughitt",
          "commits": 4,
          "avatar_url": "https://avatars.githubusercontent.com/u/125001?v=4"
        },
        {
          "type": "User",
          "login": "mspinelli",
          "commits": 3,
          "avatar_url": "https://avatars.githubusercontent.com/u/651748?v=4"
        },
        {
          "type": "User",
          "login": "hsiaoyi0504",
          "commits": 2,
          "avatar_url": "https://avatars.githubusercontent.com/u/10943928?v=4"
        },
        {
          "type": "User",
          "login": "tipabu",
          "commits": 2,
          "avatar_url": "https://avatars.githubusercontent.com/u/4432952?v=4"
        },
        {
          "type": "User",
          "login": "jwm",
          "commits": 2,
          "avatar_url": "https://avatars.githubusercontent.com/u/37176?v=4"
        }
      ],
      "contributors_sampled": 25,
      "top_contributor_share": 0.904
    },
    "quality_signals": {
      "has_ci": false,
      "has_tests": true,
      "ci_workflows": [],
      "has_docs_dir": false,
      "linter_configs": [],
      "has_editorconfig": false,
      "has_linter_config": false,
      "has_precommit_config": false
    },
    "security_signals": {
      "lockfiles": [],
      "scorecard": {
        "checks": [
          {
            "name": "Binary-Artifacts",
            "score": 10,
            "reason": "no binaries found in the repo",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#binary-artifacts"
          },
          {
            "name": "Branch-Protection",
            "score": 0,
            "reason": "branch protection not enabled on development/release branches",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#branch-protection"
          },
          {
            "name": "CI-Tests",
            "score": 0,
            "reason": "0 out of 9 merged PRs checked by a CI test -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#ci-tests"
          },
          {
            "name": "CII-Best-Practices",
            "score": 0,
            "reason": "no effort to earn an OpenSSF best practices badge detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#cii-best-practices"
          },
          {
            "name": "Code-Review",
            "score": 4,
            "reason": "Found 9/20 approved changesets -- score normalized to 4",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#code-review"
          },
          {
            "name": "Contributors",
            "score": 10,
            "reason": "project has 25 contributing companies or organizations",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#contributors"
          },
          {
            "name": "Dangerous-Workflow",
            "score": null,
            "reason": "no workflows found",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dangerous-workflow"
          },
          {
            "name": "Dependency-Update-Tool",
            "score": 0,
            "reason": "no update tool detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dependency-update-tool"
          },
          {
            "name": "Fuzzing",
            "score": 0,
            "reason": "project is not fuzzed",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#fuzzing"
          },
          {
            "name": "License",
            "score": 0,
            "reason": "license file not detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#license"
          },
          {
            "name": "Maintained",
            "score": 0,
            "reason": "0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#maintained"
          },
          {
            "name": "Packaging",
            "score": null,
            "reason": "packaging workflow not detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#packaging"
          },
          {
            "name": "Pinned-Dependencies",
            "score": null,
            "reason": "no dependencies found",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#pinned-dependencies"
          },
          {
            "name": "SAST",
            "score": 0,
            "reason": "SAST tool is not run on all commits -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#sast"
          },
          {
            "name": "Security-Policy",
            "score": 0,
            "reason": "security policy file not detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#security-policy"
          },
          {
            "name": "Signed-Releases",
            "score": null,
            "reason": "no releases found",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#signed-releases"
          },
          {
            "name": "Token-Permissions",
            "score": null,
            "reason": "No tokens found",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#token-permissions"
          },
          {
            "name": "Vulnerabilities",
            "score": 10,
            "reason": "0 existing vulnerabilities detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#vulnerabilities"
          }
        ],
        "commit": "320353c64ee0dc938113ca36f19b2e6de6b597be",
        "ran_at": "2026-07-21T23:47:57Z",
        "aggregate_score": 2.9,
        "scorecard_version": "v5.5.0"
      },
      "has_codeql_workflow": false,
      "has_security_policy": false,
      "has_dependabot_config": false
    },
    "contribution_flow": {
      "collected": true,
      "ci_last_run_at": null,
      "oldest_open_prs": [
        {
          "number": 146,
          "created_at": "2024-11-05T21:58:40Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 149,
          "created_at": "2026-05-23T13:40:15Z",
          "last_comment_at": null,
          "last_comment_author": null
        }
      ],
      "last_merged_pr_at": "2025-02-05T14:20:51Z",
      "ci_last_conclusion": null,
      "oldest_open_issues": [
        {
          "number": 86,
          "created_at": "2014-04-18T22:41:23Z",
          "last_comment_at": "2014-05-15T09:57:18Z",
          "last_comment_author": "chapmanb"
        },
        {
          "number": 95,
          "created_at": "2015-01-14T21:31:09Z",
          "last_comment_at": "2015-06-18T16:45:52Z",
          "last_comment_author": "bgruening"
        },
        {
          "number": 99,
          "created_at": "2015-05-29T15:42:40Z",
          "last_comment_at": "2016-06-01T05:10:41Z",
          "last_comment_author": "Swati6783"
        },
        {
          "number": 102,
          "created_at": "2015-10-26T13:03:40Z",
          "last_comment_at": "2015-11-17T17:18:09Z",
          "last_comment_author": "timflutre"
        },
        {
          "number": 105,
          "created_at": "2015-12-09T21:13:21Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 108,
          "created_at": "2016-02-09T08:29:57Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 109,
          "created_at": "2016-05-26T18:48:43Z",
          "last_comment_at": "2016-05-30T15:42:19Z",
          "last_comment_author": "hexylena"
        },
        {
          "number": 111,
          "created_at": "2016-09-21T14:17:46Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 115,
          "created_at": "2018-03-15T08:25:04Z",
          "last_comment_at": "2018-03-15T09:58:24Z",
          "last_comment_author": "chapmanb"
        },
        {
          "number": 118,
          "created_at": "2018-07-10T12:32:14Z",
          "last_comment_at": "2018-07-12T15:13:51Z",
          "last_comment_author": "fbeghini"
        },
        {
          "number": 128,
          "created_at": "2019-12-05T15:36:29Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 131,
          "created_at": "2020-09-18T12:19:15Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 132,
          "created_at": "2020-09-18T12:23:49Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 136,
          "created_at": "2023-02-13T13:09:03Z",
          "last_comment_at": "2024-02-01T18:34:42Z",
          "last_comment_author": "corneliusroemer"
        },
        {
          "number": 142,
          "created_at": "2024-01-29T19:13:14Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 143,
          "created_at": "2024-01-29T19:48:46Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 144,
          "created_at": "2024-03-28T11:07:35Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 148,
          "created_at": "2026-02-17T15:54:19Z",
          "last_comment_at": null,
          "last_comment_author": null
        }
      ]
    }
  },
  "config": {
    "disabled_metrics": [],
    "disabled_categories": [],
    "disabled_components": {}
  },
  "source": {
    "url": "https://github.com/chapmanb/bcbb",
    "host": "github.com",
    "name": "bcbb",
    "owner": "chapmanb"
  },
  "metrics": {
    "overall": {
      "key": "overall",
      "band": "at_risk",
      "name": "Overall health",
      "note": "Abandonment Policy applies a 85% multiplier to weighted overall health.",
      "notes": [
        {
          "code": "abandonment_overall_adjustment",
          "params": {
            "cap": 0,
            "pct": 85
          }
        }
      ],
      "value": 34,
      "inputs": {
        "security": 43,
        "vitality": 10,
        "community": 52,
        "governance": 59,
        "engineering": 36,
        "abandonment_cap": null,
        "abandonment_state": "at_risk",
        "abandonment_multiplier": 85,
        "weighted_overall_before_abandonment": 40,
        "overall_after_abandonment_multiplier": 34
      },
      "components": []
    },
    "categories": [
      {
        "key": "vitality",
        "band": "critical",
        "name": "Vitality",
        "value": 10,
        "weight": 0.22,
        "metrics": [
          {
            "key": "development_activity",
            "band": "critical",
            "name": "Development activity",
            "note": null,
            "notes": [],
            "value": 1,
            "inputs": {
              "commits_last_year": 0,
              "human_commit_share": 1,
              "days_since_last_push": 531,
              "active_weeks_last_year": 0
            },
            "components": [
              {
                "key": "push_recency",
                "name": "Push recency",
                "detail": "last push 531 days ago",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "push_recency",
                    "params": {
                      "days": 531
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_cadence",
                "name": "Commit cadence",
                "detail": "0/52 weeks with commits",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "commit_cadence_weeks",
                    "params": {
                      "weeks": 0
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_volume",
                "name": "Commit volume",
                "detail": "0 commits in the last year",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "commits_last_year",
                    "params": {
                      "count": 0
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "openssf_scorecard_maintained",
                "name": "OpenSSF Scorecard: Maintained",
                "detail": "0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "release_discipline",
            "band": "critical",
            "name": "Release discipline",
            "note": "Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Signed-Releases. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "openssf_scorecard_signed_releases"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 24,
            "inputs": {
              "releases_count": 2,
              "latest_release_tag": "v0.6.7",
              "releases_from_tags": true,
              "days_since_latest_release": 1749,
              "mean_days_between_releases": 3164.1
            },
            "components": [
              {
                "key": "ships_releases",
                "name": "Ships releases",
                "detail": "2 version tags (no GitHub releases)",
                "points": 16.2,
                "status": "partial",
                "details": [
                  {
                    "code": "version_tags_no_releases",
                    "params": {
                      "count": 2
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "release_recency",
                "name": "Release recency",
                "detail": "latest release 1749 days ago",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "release_recency",
                    "params": {
                      "days": 1749
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "release_cadence",
                "name": "Release cadence",
                "detail": "a release every ~3164.1 days",
                "points": 5.4,
                "status": "partial",
                "details": [
                  {
                    "code": "release_cadence",
                    "params": {
                      "gap": 3164.1
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "openssf_scorecard_signed_releases",
                "name": "OpenSSF Scorecard: Signed-Releases",
                "detail": "no releases found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              }
            ]
          },
          {
            "key": "abandonment",
            "band": "excellent",
            "name": "Abandonment",
            "note": null,
            "notes": [],
            "value": 85,
            "inputs": {
              "cap": null,
              "state": "at_risk",
              "guards": [
                "dependencies_clean"
              ],
              "signals": [
                "issue_rot",
                "scorecard_unmaintained"
              ],
              "red_flag": true,
              "multiplier_pct": 85,
              "declared_reason": null,
              "unverified_reason": null,
              "unanswered_open_prs": 1,
              "unanswered_open_issues": 15,
              "days_since_last_merged_pr": 531,
              "days_since_last_human_commit": 531,
              "days_since_last_human_commit_is_floor": false
            },
            "components": [
              {
                "key": "project_is_still_maintained",
                "name": "Project is still maintained",
                "detail": "no human commit for 531 days; 2 unmet obligation(s): issues unanswered, Scorecard reports it unmaintained",
                "points": 85,
                "status": "partial",
                "details": [
                  {
                    "code": "abandonment_flagged",
                    "params": {
                      "days": 531,
                      "count": 2,
                      "signals": "issues unanswered, Scorecard reports it unmaintained"
                    }
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Is the project alive — is code being written and are releases shipping?"
      },
      {
        "key": "community",
        "band": "moderate",
        "name": "Community & Adoption",
        "value": 52,
        "weight": 0.18,
        "metrics": [
          {
            "key": "popularity",
            "band": "good",
            "name": "Popularity & adoption",
            "note": null,
            "notes": [],
            "value": 75,
            "inputs": {
              "forks": 241,
              "stars": 644,
              "watchers": 55,
              "growth_state": "organic",
              "growth_factor_pct": 100
            },
            "components": [
              {
                "key": "stars",
                "name": "Stars",
                "detail": "644 stars",
                "points": 45.6,
                "status": "partial",
                "details": [
                  {
                    "code": "stars",
                    "params": {
                      "count": 644
                    }
                  }
                ],
                "max_points": 60
              },
              {
                "key": "forks",
                "name": "Forks",
                "detail": "241 forks",
                "points": 19.8,
                "status": "partial",
                "details": [
                  {
                    "code": "forks",
                    "params": {
                      "count": 241
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "watchers",
                "name": "Watchers",
                "detail": "55 watchers",
                "points": 9.6,
                "status": "partial",
                "details": [
                  {
                    "code": "watchers",
                    "params": {
                      "count": 55
                    }
                  }
                ],
                "max_points": 15
              }
            ]
          },
          {
            "key": "community_health",
            "band": "critical",
            "name": "Community health",
            "note": null,
            "notes": [],
            "value": 25,
            "inputs": {
              "has_readme": true,
              "has_license": false,
              "has_contributing": false,
              "has_issue_template": false,
              "has_code_of_conduct": false,
              "has_pull_request_template": false
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 22.5,
                "status": "met",
                "details": [],
                "max_points": 22.5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "no license file detected",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "license_absent",
                    "params": {}
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributing_guide",
                "name": "CONTRIBUTING guide",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 18
              },
              {
                "key": "code_of_conduct",
                "name": "Code of conduct",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 13.5
              },
              {
                "key": "issue_template",
                "name": "Issue template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.2
              },
              {
                "key": "pr_template",
                "name": "PR template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.3
              }
            ]
          }
        ],
        "description": "Does the project have users, downloads, attention, and a welcoming setup for contributors?"
      },
      {
        "key": "governance",
        "band": "moderate",
        "name": "Sustainability & Governance",
        "value": 59,
        "weight": 0.24,
        "metrics": [
          {
            "key": "maintainer_resilience",
            "band": "at_risk",
            "name": "Maintainer resilience (bus factor)",
            "note": null,
            "notes": [],
            "value": 35,
            "inputs": {
              "bus_factor": 1,
              "contributors_sampled": 25,
              "top_contributor_share": 0.904
            },
            "components": [
              {
                "key": "bus_factor",
                "name": "Bus factor",
                "detail": "1 contributor(s) cover half of all commits",
                "points": 9,
                "status": "partial",
                "details": [
                  {
                    "code": "bus_factor",
                    "params": {
                      "count": 1
                    }
                  }
                ],
                "max_points": 54
              },
              {
                "key": "commit_distribution",
                "name": "Commit distribution",
                "detail": "top contributor authored 90% of commits",
                "points": 2.2,
                "status": "partial",
                "details": [
                  {
                    "code": "top_contributor_share",
                    "params": {
                      "share": 90
                    }
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributor_breadth",
                "name": "Contributor breadth",
                "detail": "25 contributors",
                "points": 13.5,
                "status": "met",
                "details": [
                  {
                    "code": "contributors_sampled",
                    "params": {
                      "count": 25
                    }
                  }
                ],
                "max_points": 13.5
              },
              {
                "key": "openssf_scorecard_contributors",
                "name": "OpenSSF Scorecard: Contributors",
                "detail": "project has 25 contributing companies or organizations",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "responsiveness",
            "band": "moderate",
            "name": "Issue & PR responsiveness",
            "note": null,
            "notes": [],
            "value": 68,
            "inputs": {
              "merged_prs": 46,
              "open_issues": 18,
              "closed_issues": 62,
              "issue_closed_ratio": 0.775,
              "closed_unmerged_prs": 21
            },
            "components": [
              {
                "key": "issue_resolution",
                "name": "Issue resolution",
                "detail": "78% of issues closed",
                "points": 36.2,
                "status": "partial",
                "details": [
                  {
                    "code": "issues_closed_share",
                    "params": {
                      "share": 78
                    }
                  }
                ],
                "max_points": 46.75
              },
              {
                "key": "pr_acceptance",
                "name": "PR acceptance",
                "detail": "46/67 decided PRs merged",
                "points": 26.3,
                "status": "partial",
                "details": [
                  {
                    "code": "decided_prs_merged",
                    "params": {
                      "merged": 46,
                      "decided": 67
                    }
                  }
                ],
                "max_points": 38.25
              },
              {
                "key": "openssf_scorecard_code_review",
                "name": "OpenSSF Scorecard: Code-Review",
                "detail": "Found 9/20 approved changesets -- score normalized to 4",
                "points": 6,
                "status": "partial",
                "details": [],
                "max_points": 15
              }
            ]
          },
          {
            "key": "stewardship",
            "band": "good",
            "name": "Ownership & stewardship",
            "note": "Excluded from scoring (no data or not applicable): Verified domain. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "verified_domain"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 71,
            "inputs": {
              "followers": 982,
              "owner_type": "User",
              "is_verified": null,
              "owner_login": "chapmanb",
              "public_repos": 121,
              "account_age_days": 6433
            },
            "components": [
              {
                "key": "ownership_backing",
                "name": "Ownership backing",
                "detail": "personal (user) account",
                "points": 10,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_personal",
                    "params": {}
                  }
                ],
                "max_points": 30
              },
              {
                "key": "verified_domain",
                "name": "Verified domain",
                "detail": "not applicable to user accounts",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "not_applicable_to_user_accounts",
                    "params": {}
                  }
                ],
                "max_points": 20
              },
              {
                "key": "owner_reach",
                "name": "Owner reach",
                "detail": "982 followers of chapmanb",
                "points": 21.5,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_followers",
                    "params": {
                      "count": 982,
                      "login": "chapmanb"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "track_record",
                "name": "Track record",
                "detail": "121 public repos, account ~17 yr old",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "public_repos",
                    "params": {
                      "count": 121
                    }
                  },
                  {
                    "code": "account_age_years",
                    "params": {
                      "years": 17
                    }
                  }
                ],
                "max_points": 25
              }
            ]
          },
          {
            "key": "package_maintenance",
            "band": "moderate",
            "name": "Package maintenance",
            "note": null,
            "notes": [],
            "value": 69,
            "inputs": {
              "packages": [
                "bcbio-gff"
              ],
              "ecosystems": "pypi",
              "any_deprecated": false,
              "min_days_since_publish": 904
            },
            "components": [
              {
                "key": "published_resolvable",
                "name": "Published & resolvable",
                "detail": "1 package(s) on pypi",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "packages_published",
                    "params": {
                      "count": 1,
                      "ecosystems": "pypi"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "publish_recency",
                "name": "Publish recency",
                "detail": "latest publish 904 days ago",
                "points": 4,
                "status": "partial",
                "details": [
                  {
                    "code": "publish_recency",
                    "params": {
                      "days": 904
                    }
                  }
                ],
                "max_points": 35
              },
              {
                "key": "version_history",
                "name": "Version history",
                "detail": "15 published versions",
                "points": 20,
                "status": "met",
                "details": [
                  {
                    "code": "published_versions",
                    "params": {
                      "count": 15
                    }
                  }
                ],
                "max_points": 20
              },
              {
                "key": "not_deprecated",
                "name": "Not deprecated",
                "detail": "active, not deprecated or yanked",
                "points": 20,
                "status": "met",
                "details": [
                  {
                    "code": "package_not_deprecated",
                    "params": {}
                  }
                ],
                "max_points": 20
              }
            ]
          }
        ],
        "description": "Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?"
      },
      {
        "key": "engineering",
        "band": "at_risk",
        "name": "Engineering Quality",
        "value": 36,
        "weight": 0.2,
        "metrics": [
          {
            "key": "engineering_practices",
            "band": "critical",
            "name": "Engineering practices",
            "note": null,
            "notes": [],
            "value": 24,
            "inputs": {
              "has_ci": false,
              "has_tests": true,
              "has_editorconfig": false,
              "has_linter_config": false,
              "has_precommit_config": false
            },
            "components": [
              {
                "key": "ci_workflows",
                "name": "CI workflows",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 24
              },
              {
                "key": "tests_present",
                "name": "Tests present",
                "detail": null,
                "points": 24,
                "status": "met",
                "details": [],
                "max_points": 24
              },
              {
                "key": "linter_config",
                "name": "Linter config",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 16
              },
              {
                "key": "pre_commit_hooks",
                "name": "Pre-commit hooks",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 9.6
              },
              {
                "key": "editorconfig",
                "name": ".editorconfig",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.4
              },
              {
                "key": "openssf_scorecard_ci_tests",
                "name": "OpenSSF Scorecard: CI-Tests",
                "detail": "0 out of 9 merged PRs checked by a CI test -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              }
            ]
          },
          {
            "key": "documentation",
            "band": "moderate",
            "name": "Documentation",
            "note": null,
            "notes": [],
            "value": 55,
            "inputs": {
              "topics": [],
              "has_wiki": false,
              "homepage": "http://bcbio.wordpress.com",
              "has_readme": true,
              "has_docs_dir": false,
              "has_description": true
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 30,
                "status": "met",
                "details": [],
                "max_points": 30
              },
              {
                "key": "documentation_directory",
                "name": "Documentation directory",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 25
              },
              {
                "key": "documentation_homepage_site",
                "name": "Documentation / homepage site",
                "detail": "http://bcbio.wordpress.com",
                "points": 15,
                "status": "met",
                "details": [],
                "max_points": 15
              },
              {
                "key": "repository_description",
                "name": "Repository description",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "topics",
                "name": "Topics",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              },
              {
                "key": "wiki",
                "name": "Wiki",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          }
        ],
        "description": "Are baseline engineering and documentation practices in place?"
      },
      {
        "key": "security",
        "band": "at_risk",
        "name": "Security",
        "value": 43,
        "weight": 0.16,
        "metrics": [
          {
            "key": "security_posture",
            "band": "critical",
            "name": "Security posture",
            "note": "Excluded from scoring (no data or not applicable): Dangerous-Workflow, Packaging, Pinned-Dependencies, Signed-Releases, Token-Permissions. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "dangerous_workflow",
                    "packaging",
                    "pinned_dependencies",
                    "signed_releases",
                    "token_permissions"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 29,
            "inputs": {
              "source": "openssf_scorecard",
              "checks_evaluated": 13,
              "scorecard_version": "v5.5.0",
              "checks_inconclusive": 5,
              "scorecard_aggregate": 2.9
            },
            "components": [
              {
                "key": "binary_artifacts",
                "name": "Binary-Artifacts",
                "detail": "no binaries found in the repo",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "branch_protection",
                "name": "Branch-Protection",
                "detail": "branch protection not enabled on development/release branches",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "ci_tests",
                "name": "CI-Tests",
                "detail": "0 out of 9 merged PRs checked by a CI test -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "cii_best_practices",
                "name": "CII-Best-Practices",
                "detail": "no effort to earn an OpenSSF best practices badge detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "code_review",
                "name": "Code-Review",
                "detail": "Found 9/20 approved changesets -- score normalized to 4",
                "points": 3,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "contributors",
                "name": "Contributors",
                "detail": "project has 25 contributing companies or organizations",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "dangerous_workflow",
                "name": "Dangerous-Workflow",
                "detail": "no workflows found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              },
              {
                "key": "dependency_update_tool",
                "name": "Dependency-Update-Tool",
                "detail": "no update tool detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "fuzzing",
                "name": "Fuzzing",
                "detail": "project is not fuzzed",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "license file not detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "maintained",
                "name": "Maintained",
                "detail": "0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "packaging",
                "name": "Packaging",
                "detail": "packaging workflow not detected",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 5
              },
              {
                "key": "pinned_dependencies",
                "name": "Pinned-Dependencies",
                "detail": "no dependencies found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 5
              },
              {
                "key": "sast",
                "name": "SAST",
                "detail": "SAST tool is not run on all commits -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "security_policy",
                "name": "Security-Policy",
                "detail": "security policy file not detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "signed_releases",
                "name": "Signed-Releases",
                "detail": "no releases found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "token_permissions",
                "name": "Token-Permissions",
                "detail": "No tokens found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "vulnerabilities",
                "name": "Vulnerabilities",
                "detail": "0 existing vulnerabilities detected",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              }
            ]
          },
          {
            "key": "dependency_advisories",
            "band": "excellent",
            "name": "Dependency advisories",
            "note": "Excluded from scoring (no data or not applicable): No advisories left outstanding. Remaining weights renormalized. Matched the pypi:bcbio-gff@0.7.1 runtime dependency closure — what installing the published package pulls in — 3 packages. Reachability is not analyzed.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "no_advisories_left_outstanding"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              },
              {
                "code": "advisories_scope_published",
                "params": {
                  "package": "pypi:bcbio-gff@0.7.1",
                  "assessed": 3
                }
              },
              {
                "code": "advisories_reachability",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "source": "osv",
              "advisories": 0,
              "affected_packages": 0,
              "assessed_packages": 3,
              "unassessed_packages": 0,
              "affected_by_severity": "none",
              "direct_affected_packages": 0
            },
            "components": [
              {
                "key": "direct_dependencies_free_of_known_advisories",
                "name": "Direct dependencies free of known advisories",
                "detail": "no direct dependency carries a known advisory",
                "points": 35,
                "status": "met",
                "details": [
                  {
                    "code": "no_direct_advisories",
                    "params": {}
                  }
                ],
                "max_points": 35
              },
              {
                "key": "indirect_dependencies_free_of_known_advisories",
                "name": "Indirect dependencies free of known advisories",
                "detail": "no indirect dependency carries a known advisory",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "no_indirect_advisories",
                    "params": {}
                  }
                ],
                "max_points": 25
              },
              {
                "key": "no_advisories_left_outstanding",
                "name": "No advisories left outstanding",
                "detail": "no advisory carries a publication date",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "advisories_no_publication_date",
                    "params": {}
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "malicious_dependencies",
            "band": "excellent",
            "name": "Malicious dependencies",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "source": "osv",
              "meaning": "reported as a malicious package by the OpenSSF corpus; the remedy is removal or moving off the compromised name, never an upgrade of the same artifact. Versions the registry has since pulled are listed but not scored",
              "packages": [],
              "red_flag": false,
              "assessed_packages": 3,
              "malicious_packages": 0,
              "direct_malicious_packages": 0,
              "withdrawn_malicious_packages": 0,
              "installable_malicious_packages": 0
            },
            "components": [
              {
                "key": "no_dependency_reported_as_a_malicious_package",
                "name": "No dependency reported as a malicious package",
                "detail": "no dependency is reported as a malicious package",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "no_malicious_dependencies",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          },
          {
            "key": "high_risk_jurisdiction_exposure",
            "band": "excellent",
            "name": "High-Risk Jurisdiction Exposure",
            "note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
            "notes": [
              {
                "code": "jurisdiction_evidence_limits",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "meaning": "self-published location evidence; not nationality or citizenship",
              "red_flag": false,
              "exposures": [],
              "policy_countries": [
                "Russia",
                "Iran",
                "North Korea"
              ],
              "review_only_matches": 0,
              "assessed_self_published_locations": 19
            },
            "components": [
              {
                "key": "policy_exposure_multiplier",
                "name": "Policy exposure multiplier",
                "detail": "no confirmed policy-scope location match",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "jurisdiction_no_match",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
      },
      {
        "key": "ai_readiness",
        "band": "at_risk",
        "name": "AI Readiness",
        "value": 37,
        "weight": 0,
        "metrics": [
          {
            "key": "ai_agent_context",
            "band": "critical",
            "name": "Agent context & guidance",
            "note": null,
            "notes": [],
            "value": 16,
            "inputs": {
              "has_llms_txt": false,
              "legible_history_share": 0.3,
              "agent_instruction_files": [],
              "agent_instruction_max_bytes": null
            },
            "components": [
              {
                "key": "agent_instructions",
                "name": "Agent instructions",
                "detail": "no CLAUDE.md / AGENTS.md / editor rules",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_instructions",
                    "params": {}
                  }
                ],
                "max_points": 45
              },
              {
                "key": "machine_readable_docs_llms_txt",
                "name": "Machine-readable docs (llms.txt)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              },
              {
                "key": "legible_commit_history",
                "name": "Legible commit history",
                "detail": "30 of 100 human commits state their intent (structured subject or explanatory body)",
                "points": 16,
                "status": "partial",
                "details": [
                  {
                    "code": "legible_history",
                    "params": {
                      "legible": 30,
                      "sampled": 100
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "ai_verify_loop",
            "band": "at_risk",
            "name": "Verify loop (build / test / typecheck)",
            "note": "Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Pinned-Dependencies. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "openssf_scorecard_pinned_dependencies"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 44,
            "inputs": {
              "has_nix": false,
              "has_tests": true,
              "lockfiles": [],
              "has_dockerfile": false,
              "typed_language": false,
              "bootstrap_files": [
                "abstracts/bosc_2015_bcbio_prioritization/Makefile",
                "abstracts/bosc_2016_bcbio_cwl/Makefile",
                "abstracts/bosc_2017_bcbio_integration/Makefile",
                "abstracts/bosc_2018_bcbio_validation/Makefile",
                "abstracts/hackathon_workshop_2017/Makefile",
                "nextgen/docs/Makefile",
                "papers/bcbio-nextgen/Makefile"
              ],
              "has_devcontainer": false,
              "has_linter_config": false,
              "typecheck_configs": [],
              "agent_commit_share": 0,
              "toolchain_manifests": [],
              "dependency_bot_commit_share": 0
            },
            "components": [
              {
                "key": "one_command_bootstrap",
                "name": "One-command bootstrap",
                "detail": "abstracts/bosc_2015_bcbio_prioritization/Makefile, abstracts/bosc_2016_bcbio_cwl/Makefile, abstracts/bosc_2017_bcbio_integration/Makefile, abstracts/bosc_2018_bcbio_validation/Makefile, abstracts/hackathon_workshop_2017/Makefile, nextgen/docs/Makefile, papers/bcbio-nextgen/Makefile",
                "points": 18,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "abstracts/bosc_2015_bcbio_prioritization/Makefile, abstracts/bosc_2016_bcbio_cwl/Makefile, abstracts/bosc_2017_bcbio_integration/Makefile, abstracts/bosc_2018_bcbio_validation/Makefile, abstracts/hackathon_workshop_2017/Makefile, nextgen/docs/Makefile, papers/bcbio-nextgen/Makefile"
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "automated_tests",
                "name": "Automated tests",
                "detail": null,
                "points": 22,
                "status": "met",
                "details": [],
                "max_points": 22
              },
              {
                "key": "lint_format_config",
                "name": "Lint / format config",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "static_type_checking",
                "name": "Static type checking",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "reproducible_environment",
                "name": "Reproducible environment",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              },
              {
                "key": "demonstrated_agent_practice",
                "name": "Demonstrated agent practice",
                "detail": "no agent-authored commits among the last 100",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_authored_commits",
                    "params": {
                      "sampled": 100
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "automated_maintenance",
                "name": "Automated maintenance",
                "detail": "no automated dependency updates observed",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_dependency_automation",
                    "params": {}
                  }
                ],
                "max_points": 8
              },
              {
                "key": "openssf_scorecard_pinned_dependencies",
                "name": "OpenSSF Scorecard: Pinned-Dependencies",
                "detail": "no dependencies found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              }
            ]
          },
          {
            "key": "ai_code_legibility",
            "band": "moderate",
            "name": "Code legibility for models",
            "note": null,
            "notes": [],
            "value": 55,
            "inputs": {
              "primary_language": "Python",
              "largest_source_bytes": 70319,
              "source_files_sampled": 186,
              "oversized_source_files": 1
            },
            "components": [
              {
                "key": "type_checkable_code",
                "name": "Type-checkable code",
                "detail": "Python without a type-check config",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_typecheck_config_language",
                    "params": {
                      "language": "Python"
                    }
                  }
                ],
                "max_points": 45
              },
              {
                "key": "manageable_file_sizes",
                "name": "Manageable file sizes",
                "detail": "1/186 source files over 60KB",
                "points": 54.7,
                "status": "partial",
                "details": [
                  {
                    "code": "oversized_source_files",
                    "params": {
                      "kb": 60,
                      "sampled": 186,
                      "oversized": 1
                    }
                  }
                ],
                "max_points": 55
              }
            ]
          },
          {
            "key": "ai_interfaces",
            "band": "at_risk",
            "name": "Machine-readable interfaces",
            "note": null,
            "notes": [],
            "value": 40,
            "inputs": {
              "example_dirs": [
                "examples",
                "notebooks"
              ],
              "has_mcp_signal": false,
              "api_schema_files": []
            },
            "components": [
              {
                "key": "api_schema_openapi_graphql_proto",
                "name": "API schema (OpenAPI/GraphQL/proto)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 40
              },
              {
                "key": "mcp_server",
                "name": "MCP server",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              },
              {
                "key": "runnable_examples",
                "name": "Runnable examples",
                "detail": "examples, notebooks",
                "points": 40,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "examples, notebooks"
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          }
        ],
        "description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
      }
    ],
    "metrics_version": "1.13.0"
  },
  "warnings": [
    "pypi package 'bcbio-phyloblast' points at a different repository (http://bcbio.wordpress.com); excluded from ecosystem scoring"
  ],
  "report_type": "repository",
  "generated_at": "2026-07-21T23:48:23.672955Z",
  "schema_version": "0.26.0",
  "badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/c/chapmanb/bcbb.svg",
  "full_name": "chapmanb/bcbb",
  "license_state": "absent",
  "license_spdx": null
}

Las puntuaciones son señales, no garantías. Reflejan prácticas públicamente visibles en GitHub; no son una auditoría de código ni una garantía de seguridad.

Los datos ausentes se excluyen y los pesos se renormalizan; nunca se puntúan como cero. La metodología es versionada y abierta: métricas v1.13.0, esquema v0.26.0 — metodología completa · wiki de métricas.

Cómo se sitúa un resultado dentro del registro general: estadísticas agregadasPyPI.