Registro público
Informe de salud del softwareesquema 0.27.0 · métricas 1.13.0 · 2026-07-28 02:49 UTC

jolespin / veba

A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes

PythonAGPL-3.0★ 105 estrellas⑂ 12 forksdesde abr 2022Ver en GitHub ↗

jolespin/veba tiene un índice de salud de 45 sobre 100, lo que lo sitúa en la banda En riesgo. Su puntuación más alta es Vitality (70/100) y la más baja, AI Readiness (20/100). Se actualizó por última vez hace 14 días. Una sola persona concentra la mayor parte del trabajo reciente.

45
global / 100
En riesgo

Índice de salud del software

Las métricas se agrupan en categorías ponderadas sobre una escala de 1 a 100. El resultado global parte de su media; cuando la evidencia pública activa la Política de Jurisdicciones de Alto Riesgo, la calificación se ajusta y recibe el límite 49 (En riesgo). Preparación para IA queda fuera.

45
Excelente85-100Ejemplar; cumple prácticamente todos los criterios evaluados
Bueno70-84Saludable; carencias menores
Moderado50-69Aceptable con carencias notables; se recomienda revisión
En riesgo30-49Debilidades significativas; su adopción exige cautela
Crítico1-29Problemas graves (proyecto abandonado, un solo mantenedor, sin higiene)
VitalidadComunidad yAdopciónSostenibilidady GobernanzaCalidad deIngenieríaSeguridadPreparaciónpara IA

Perfil de puntuación

Cada eje es una categoría. La forma importa más que la media: un proyecto sano llena toda la figura, mientras que un perfil de picos y cráteres indica que la fortaleza en una dimensión enmascara el riesgo en otra.

Titularidad

Josh L. EspinozaCuenta personal
93 seguidores50 repositorios públicosdesde oct 2014

Este repositorio pertenece a una cuenta personal. Un proyecto con un único propietario conlleva más riesgo de continuidad que uno respaldado por una organización.

Métricas por categoría

Vitalidad

¿Está vivo el proyecto: se escribe código y se publican versiones?

70Bueno · 22% del índice global
Cómo se puntúa
28.8/36Recencia de push — último push hace 14 días
6.9/36Cadencia de commits — 10/52 semanas con commits
16.2/18Volumen de commits — 62 commits en el último año
10/10OpenSSF Scorecard: Maintained — 14 commit(s) and 3 issue activity found in the last 90 days -- score normalized to 10
Datos de entrada utilizados
commits_last_year62
human_commit_share1
days_since_last_push14
active_weeks_last_year10
Cómo se puntúa
27/27Publica versiones — 27 versiones publicadas
36/36Recencia de las versiones — última versión hace 24 días
19.8/27Cadencia de publicación — una versión cada ~83,7 días
0/10OpenSSF Scorecard: Signed-Releases — Project has not signed or included provenance with any releases.
Datos de entrada utilizados
releases_count27
latest_release_tagv2.5.3
releases_from_tagsno
days_since_latest_release24
mean_days_between_releases83,7

Comunidad y Adopción

¿Tiene el proyecto usuarios, descargas, atención y unas condiciones acogedoras para quienes contribuyen?

47En riesgo · 18% del índice global
Cómo se puntúa
32.7/60Estrellas — 105 estrellas
8.7/25Forks — 12 forks
2.7/15Observadores — 4 observadores
Datos de entrada utilizados
forks12
stars105
watchers4
growth_stateunverified
growth_factor_pct100
growth_unverified_reasonno_history
Cómo se puntúa
22.5/22.5README
22.5/22.5Licencia — licencia reconocida (AGPL-3.0)
0/18Guía CONTRIBUTING
0/13.5Código de conducta
0/7.2Plantilla de issues
0/6.3Plantilla de PR
Datos de entrada utilizados
has_readme
has_license
has_contributingno
has_issue_templateno
has_code_of_conductno
has_pull_request_templateno

Sostenibilidad y Gobernanza

¿Sobrevivirá el proyecto a sus personas: factor bus, capacidad de respuesta, quién lo respalda y mantenimiento del paquete?

47En riesgo · 24% del índice global
Cómo se puntúa
9/54Factor bus — la mitad de los commits recae en 1 contribuyente(s)
0.3/22.5Distribución de commits — el principal contribuyente firma el 98% de los commits
2.7/13.5Amplitud de contribuyentes — 2 contribuyentes
0/10OpenSSF Scorecard: Contributors — project has 0 contributing companies or organizations -- score normalized to 0
Datos de entrada utilizados
bus_factor1
contributors_sampled2
top_contributor_share0,985
Cómo se puntúa
37.7/46.8Resolución de issues — 81% de issues cerradas
37.2/38.3Aceptación de PR — 103/106 PR decididos fusionados
1.5/15OpenSSF Scorecard: Code-Review — Found 1/7 approved changesets -- score normalized to 1
Datos de entrada utilizados
merged_prs103
open_issues20
closed_issues83
issue_closed_ratio0,806
closed_unmerged_prs3
Cómo se puntúa
10/30Respaldo de la propiedad — cuenta personal (usuario)
0/20Dominio verificado — no aplicable a cuentas de usuario
14.2/25Alcance del propietario — 93 seguidores de jolespin
24.4/25Trayectoria — 50 repos públicos, cuenta de ~11 años
Datos de entrada utilizados
followers93
owner_typeUser
is_verified
owner_loginjolespin
public_repos50
account_age_days4311
Excluidos de la puntuación (sin datos o no aplicable): Dominio verificado. Los pesos restantes se han renormalizado.

Calidad de Ingeniería

¿Existen unas prácticas mínimas de ingeniería y documentación?

25Crítico · 20% del índice global
Cómo se puntúa
0/24Flujos de trabajo de CI
0/24Pruebas presentes
0/16Configuración de linter
0/9.6Hooks de pre-commit
0/6.4.editorconfig
0/20OpenSSF Scorecard: CI-Tests — 0 out of 7 merged PRs checked by a CI test -- score normalized to 0
Datos de entrada utilizados
has_cino
has_testsno
has_editorconfigno
has_linter_configno
has_precommit_configno

Documentación

60Moderado
Cómo se puntúa
30/30README
0/25Directorio de documentación
0/15Sitio de documentación / página del proyecto
10/10Descripción del repositorio
10/10Topics — 6 topics
10/10Wiki
Datos de entrada utilizados
topicsbioinformatics, genomics, metagenomics, metatranscriptomics, microbial, microbiome
has_wiki
homepage
has_readme
has_docs_dirno
has_description

Seguridad

¿Son sólidas las prácticas visibles de seguridad y de cadena de suministro, sin exposición jurisdiccional de alto riesgo sin resolver?

31En riesgo · 16% del índice global
Cómo se puntúa
7.5/7.5Binary-Artifacts — no binaries found in the repo
0/7.5Branch-Protection — branch protection not enabled on development/release branches
0/2.5CI-Tests — 0 out of 7 merged PRs checked by a CI test -- score normalized to 0
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
0.8/7.5Code-Review — Found 1/7 approved changesets -- score normalized to 1
0/2.5Contributors — project has 0 contributing companies or organizations -- score normalized to 0
0/10Dangerous-Workflow — sin datos
0/7.5Dependency-Update-Tool — no update tool detected
0/5Fuzzing — project is not fuzzed
2.5/2.5Licencia — license file detected
7.5/7.5Maintained — 14 commit(s) and 3 issue activity found in the last 90 days -- score normalized to 10
0/5Packaging — sin datos
0/5Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
0/5SAST — SAST tool is not run on all commits -- score normalized to 0
0/5Security-Policy — security policy file not detected
0/7.5Signed-Releases — Project has not signed or included provenance with any releases.
0/7.5Token-Permissions — sin datos
7.5/7.5Vulnerabilities — 0 existing vulnerabilities detected
Datos de entrada utilizados
sourceopenssf_scorecard
checks_evaluated15
scorecard_versionv5.5.0
checks_inconclusive3
scorecard_aggregate3,1
Excluidos de la puntuación (sin datos o no aplicable): dangerous_workflow, packaging, token_permissions. Los pesos restantes se han renormalizado.

Preparación para IA

¿Hasta qué punto está el repositorio preparado para desarrollarse y mantenerse con agentes de codificación de IA? Es una insignia independiente y experimental — peso 0,0, de modo que se presenta por separado y no afecta a la puntuación de salud global.

20Crítico · 0% del índice global
Cómo se puntúa
0/45Instrucciones para agentes — sin CLAUDE.md / AGENTS.md / reglas de editor
0/15Documentación legible por máquinas (llms.txt)
16/40Historial de commits legible — 30 de 100 commits humanos declaran su intención (asunto estructurado o cuerpo explicativo)
Datos de entrada utilizados
has_llms_txtno
legible_history_share0,3
agent_instruction_files
agent_instruction_max_bytes
Cómo se puntúa
0/18Arranque con un solo comando
0/22Pruebas automatizadas
0/11Configuración de lint / formato
0/11Verificación estática de tipos
10/10Entorno reproducible — Dockerfile
0/10Práctica demostrada con agentes — ningún commit con autoría de agente entre los últimos 100
0/8Mantenimiento automatizado — no se observan actualizaciones automáticas de dependencias
0/10OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
Datos de entrada utilizados
has_nixno
has_testsno
lockfiles
has_dockerfile
typed_languageno
bootstrap_files
has_devcontainerno
has_linter_configno
typecheck_configs
agent_commit_share0
toolchain_manifests
dependency_bot_commit_share0
Cómo se puntúa
0/45Código verificable por tipos — Python sin configuración de verificación de tipos
54.3/55Tamaños de archivo manejables — 2/164 archivos fuente de más de 60 KB
Datos de entrada utilizados
primary_languagePython
largest_source_bytes78.394
source_files_sampled164
oversized_source_files2

Datos clave

105estrellas de GitHub
2contribuidores
62commits en los últimos 12 meses
14días desde el último push
27versiones publicadas
1factor bus
20issues abiertas
ecosistemas de paquetes

Advertencias de recopilación de datos

  • Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token
  • GitHub dependency-graph SBOM unavailable (404); the dependency graph may be disabled for this repository

Más detalle

Historial de estrellas y forks 0 ★ / 12 ⇿
0Estrellas
12Forks
25Versiones

Cuándo se añadió cada estrella y fork, recopilado de GitHub y agrupado por día. El crecimiento acumulado se sitúa justo encima de las adiciones diarias que lo componen, de modo que ambos se leen en conjunto: la acumulación orgánica sostenida no se parece en nada a un pico abrupto y efímero. Cuando esa diferencia es medible, se informa como autenticidad del crecimiento.

0246810121212022-102024-082026-06
Mayor 1Menor 9Parche 11

Cada punto abarca 4 días.

OpenSSF Scorecard 3.1 / 10
3.1agregado

Evaluación de seguridad independiente y agnóstica en cuanto a herramientas, procedente del proyecto de código abierto OpenSSF Scorecard. Cada comprobación premia una práctica de seguridad, no la herramienta de un proveedor concreto. Las comprobaciones que Scorecard no pudo determinar se marcan como n/d y se excluyen de la puntuación de seguridad (nunca se cuentan como cero).Scorecard v5.5.0 · 2026-07-28 02:49 UTC

10Binary-Artifactsno binaries found in the repo
0Branch-Protectionbranch protection not enabled on development/release branches
0CI-Tests0 out of 7 merged PRs checked by a CI test -- score normalized to 0
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
1Code-ReviewFound 1/7 approved changesets -- score normalized to 1
0Contributorsproject has 0 contributing companies or organizations -- score normalized to 0
n/dDangerous-Workflowno workflows found
0Dependency-Update-Toolno update tool detected
0Fuzzingproject is not fuzzed
10Licenselicense file detected
10Maintained14 commit(s) and 3 issue activity found in the last 90 days -- score normalized to 10
n/dPackagingpackaging workflow not detected
0Pinned-Dependenciesdependency not pinned by hash detected -- score normalized to 0
0SASTSAST tool is not run on all commits -- score normalized to 0
0Security-Policysecurity policy file not detected
0Signed-ReleasesProject has not signed or included provenance with any releases.
n/dToken-PermissionsNo tokens found
10Vulnerabilities0 existing vulnerabilities detected
Todas las dependencias no recopilado

No fue posible recopilar el conjunto de dependencias resuelto para este informe: GitHub dependency-graph SBOM unavailable (404); the dependency graph may be disabled for this repository

Informe JSON sin procesar legible por máquina
{
  "data": {
    "repo": {
      "topics": [
        "bioinformatics",
        "genomics",
        "metagenomics",
        "metatranscriptomics",
        "microbial",
        "microbiome"
      ],
      "is_fork": false,
      "size_kb": 57966,
      "has_wiki": true,
      "homepage": null,
      "languages": {
        "R": 1461,
        "Shell": 60886,
        "Python": 2052412,
        "Dockerfile": 1646,
        "Rich Text Format": 2391
      },
      "pushed_at": "2026-07-14T01:43:36Z",
      "created_at": "2022-04-20T08:10:10Z",
      "owner_type": "User",
      "updated_at": "2026-07-17T14:38:16Z",
      "description": "A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes ",
      "is_archived": false,
      "is_disabled": false,
      "license_spdx": "AGPL-3.0",
      "default_branch": "main",
      "license_spdx_raw": "AGPL-3.0",
      "primary_language": "Python",
      "significant_languages": [
        "Python"
      ]
    },
    "owner": {
      "blog": "https://github.com/jolespin/publications",
      "name": "Josh L. Espinoza",
      "type": "User",
      "login": "jolespin",
      "company": null,
      "location": "Pacific Ocean",
      "followers": 93,
      "avatar_url": "https://avatars.githubusercontent.com/u/9061708?v=4",
      "created_at": "2014-10-07T22:58:48Z",
      "is_verified": null,
      "public_repos": 50,
      "account_age_days": 4311
    },
    "license": {
      "state": "standard",
      "spdx_id": "AGPL-3.0",
      "raw_spdx": "AGPL-3.0",
      "file_present": true,
      "scorecard_found": true,
      "profile_has_license": true
    },
    "activity": {
      "releases": [
        {
          "tag": "v2.5.3",
          "kind": "patch",
          "published_at": "2026-07-03T02:54:27Z"
        },
        {
          "tag": "v2.5.2",
          "kind": "patch",
          "published_at": "2026-04-03T20:00:24Z"
        },
        {
          "tag": "v2.5.1",
          "kind": "patch",
          "published_at": "2025-04-12T18:47:48Z"
        },
        {
          "tag": "v2.5.0",
          "kind": "minor",
          "published_at": "2025-04-10T20:40:45Z"
        },
        {
          "tag": "v2.4.2",
          "kind": "patch",
          "published_at": "2025-02-02T00:01:10Z"
        },
        {
          "tag": "v2.4.1",
          "kind": "patch",
          "published_at": "2025-02-01T23:47:42Z"
        },
        {
          "tag": "v2.4.0",
          "kind": "minor",
          "published_at": "2025-01-29T20:28:17Z"
        },
        {
          "tag": "v2.3.0",
          "kind": "minor",
          "published_at": "2024-09-22T16:52:17Z"
        },
        {
          "tag": "v2.2.1",
          "kind": "patch",
          "published_at": "2024-08-30T00:38:45Z"
        },
        {
          "tag": "v2.2.0",
          "kind": "minor",
          "published_at": "2024-06-10T01:16:47Z"
        },
        {
          "tag": "v2.1.0-zen",
          "kind": "prerelease",
          "published_at": "2024-06-03T18:46:16Z"
        },
        {
          "tag": "v2.1.0",
          "kind": "minor",
          "published_at": "2024-05-17T14:13:04Z"
        },
        {
          "tag": "v2.1.0b",
          "kind": "other",
          "published_at": "2024-05-08T21:11:06Z"
        },
        {
          "tag": "v2.0.0",
          "kind": "major",
          "published_at": "2024-03-10T20:12:45Z"
        },
        {
          "tag": "v1.5.0",
          "kind": "minor",
          "published_at": "2024-01-30T21:46:30Z"
        },
        {
          "tag": "v1.4.2",
          "kind": "patch",
          "published_at": "2023-12-22T03:41:47Z"
        },
        {
          "tag": "v1.4.1",
          "kind": "patch",
          "published_at": "2023-12-19T23:22:04Z"
        },
        {
          "tag": "v1.3.0",
          "kind": "minor",
          "published_at": "2023-10-27T21:13:37Z"
        },
        {
          "tag": "v1.2.0",
          "kind": "minor",
          "published_at": "2023-07-12T00:22:32Z"
        },
        {
          "tag": "v1.1.2",
          "kind": "patch",
          "published_at": "2023-05-17T03:34:58Z"
        },
        {
          "tag": "v1.1.1",
          "kind": "patch",
          "published_at": "2023-03-21T00:20:07Z"
        },
        {
          "tag": "v1.1.0",
          "kind": "minor",
          "published_at": "2023-03-02T20:44:45Z"
        },
        {
          "tag": "v1.0.4",
          "kind": "patch",
          "published_at": "2022-12-28T06:04:57Z"
        },
        {
          "tag": "v1.0.3e",
          "kind": "other",
          "published_at": "2022-12-14T18:47:00Z"
        },
        {
          "tag": "v1.0.2a",
          "kind": "other",
          "published_at": "2022-10-27T00:57:14Z"
        },
        {
          "tag": "v1.0.1",
          "kind": "patch",
          "published_at": "2022-10-21T00:42:36Z"
        },
        {
          "tag": "v1.0.0",
          "kind": "major",
          "published_at": "2022-09-18T22:46:46Z"
        }
      ],
      "recent_commits": [
        {
          "oid": "ceab34424cee16ec2fb8c16285c1e6afe81e6af9",
          "body": "## [2.5.3] - 2026-07-02\n### Change\n - Removed the prepending to de Bruijn graph now that support is dropping for `MetaCOaG`.  Fixes an issue when running `rnaspades.py` through the `assembly` module [Issue #208](https://github.com/jolespin/veba/issues/208)\n\nThanks to @411an13",
          "is_bot": false,
          "headline": "Merge pull request #210 from jolespin/dev",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-07-03T02:53:46Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "cf5aae8aef5639fd25be0ac4ef36f6cd1282a41a",
          "body": null,
          "is_bot": false,
          "headline": "Updated versions",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-07-03T02:51:34Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "90b1836a19686131e4facfa6a60f72dc9e3a4d47",
          "body": "…#208",
          "is_bot": false,
          "headline": "Removed support for prepending to de bruijn graphs which fixes Issue …",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-07-03T02:47:35Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "933eb62f80b6058f7b6d7048512bc3751c65fc61",
          "body": null,
          "is_bot": false,
          "headline": "Fixed issue 208",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-07-03T02:45:12Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "94c3fa3cb0216562cb26f4496aa42c05a502a5d3",
          "body": "Remove prepend-de-Bruijn support (fixes #208)",
          "is_bot": false,
          "headline": "Merge pull request #209 from 411an13/bug/208_prepend-debruijn",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-07-03T00:13:15Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "982125f13cf556846d4adcdce9b2c32876e529bc",
          "body": "Replace the explicit transcripts.fasta / transcripts.fasta.* /\ntranscripts.paths entries with a single transcripts.* glob, mirroring\nthe scaffolds.* glob used for SPAdes. Captures transcripts.paths and\nis more maintainable.",
          "is_bot": false,
          "headline": "Use transcripts.* glob in rnaSPAdes symlink step (#208)",
          "author_name": "Allan Phillips",
          "author_login": "411an13",
          "committed_at": "2026-06-30T23:39:24Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "0fe47975810f9b684f427d329de85df9ebbc00e9",
          "body": "The symlink step listed rnaSPAdes files explicitly, and the\ntranscripts.fasta.* glob didn't match transcripts.paths, so it was\nnever linked into output/. Add it explicitly and validate it as a\nstep-1 output, mirroring scaffolds.paths for SPAdes (whose scaffolds.*\nglob already covers it).",
          "is_bot": false,
          "headline": "Symlink transcripts.paths for rnaSPAdes output (#208)",
          "author_name": "Allan Phillips",
          "author_login": "411an13",
          "committed_at": "2026-06-30T23:31:53Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4c7ce120989674533b02a6f4fb22297384e2ed8e",
          "body": "rnaSPAdes writes transcripts.paths, not scaffolds.paths, but the\npipeline appended scaffolds.paths to the validated outputs for any\nprogram matching 'spades', causing validate_outputs to fail. Scope\nthe append to the non-rnaSPAdes branch (the rnaSPAdes case is handled\nseparately above, and the symlink step already special-cases it).",
          "is_bot": false,
          "headline": "Don't require scaffolds.paths output for rnaSPAdes (#208)",
          "author_name": "Allan Phillips",
          "author_login": "411an13",
          "committed_at": "2026-06-17T23:18:38Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "c2141f7e18d2a0206f7d36b50e6d650a4079dbef",
          "body": "Drop the now-deleted script from accessory_scripts in both assembly\nmodules' add_executables_to_environment().",
          "is_bot": false,
          "headline": "Remove prepend_de-bruijn_path.py from script registries (#208)",
          "author_name": "Allan Phillips",
          "author_login": "411an13",
          "committed_at": "2026-06-12T20:32:56Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "68f2fe43e730ccc7fa8387e195a991d94744a504",
          "body": null,
          "is_bot": false,
          "headline": "Document de Bruijn prepend removal in CHANGELOG (#208)",
          "author_name": "Allan Phillips",
          "author_login": "411an13",
          "committed_at": "2026-06-12T20:26:49Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1a140a18892d639c06e5080dbdca056f013f1ec6",
          "body": null,
          "is_bot": false,
          "headline": "Remove prepend_de-bruijn_path.py from version manifest (#208)",
          "author_name": "Allan Phillips",
          "author_login": "411an13",
          "committed_at": "2026-06-12T20:20:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f5763fc88d9deb208af0a9e6c36c33ce16e0ccba",
          "body": "The script's only callers (assembly.py and assembly-long.py) were\nremoved; it only ever served the soon-to-be deprecated MetaCoAG.",
          "is_bot": false,
          "headline": "Delete prepend_de-bruijn_path.py (#208)",
          "author_name": "Allan Phillips",
          "author_login": "411an13",
          "committed_at": "2026-06-12T20:15:56Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "3ae5189882b1f7008f0e8ebb8b8a6fde6f6a2c66",
          "body": "Drop the two prepend_de-bruijn_path.py calls on assembly_graph.gfa\nand assembly_info.txt in get_assembly_cmd(). These only served the\nsoon to be deprecated metaCoAG binner. The native Flye outputs are\nstill produced and symlinked to the final output, just unprefixed.",
          "is_bot": false,
          "headline": "Remove de Bruijn path prefixing from Flye assembly (#208)",
          "author_name": "Allan Phillips",
          "author_login": "411an13",
          "committed_at": "2026-06-12T20:13:21Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a2c28efef79d93a25f045741a499d85182666d08",
          "body": "Drop the prepend_de-brujin_path.py call on scaffolds.paths in\nget_assembly_cmd(). This step only served the MetaCoAG (a soon\nto be deprecated binner) and crashed on rnaSPAdes, which writes\ntranscripts.paths, not scaffolds.paths.",
          "is_bot": false,
          "headline": "Remove de Bruijn path prefixing from SPAdes assembly (#208)",
          "author_name": "Allan Phillips",
          "author_login": "411an13",
          "committed_at": "2026-06-12T19:40:57Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dd93ef4a8c611e3015a25b33abbee1ea384ffdcb",
          "body": "Formatting updates",
          "is_bot": false,
          "headline": "Merge pull request #204 from jolespin/dev",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T20:19:55Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "525d78d42a0f0d534cc1f568b2a41789052ebebb",
          "body": null,
          "is_bot": false,
          "headline": "Formatting updates",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T20:19:11Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4581db719d1c785353a425eacfd006c9ab9c520a",
          "body": "Fixed formatting in README.md",
          "is_bot": false,
          "headline": "Merge pull request #203 from jolespin/dev",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T20:18:32Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7e98b46034c0f02d576ad658ff10dff43358bfe4",
          "body": null,
          "is_bot": false,
          "headline": "Fixed formatting in README.md",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T20:18:07Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "99df801590687c17ecb2c438cc2a3096daca447c",
          "body": "Added clarification to notes in README.md",
          "is_bot": false,
          "headline": "Merge pull request #202 from jolespin/dev",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T20:17:20Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8e0e4036c11227161915a39c2d30383612374e66",
          "body": null,
          "is_bot": false,
          "headline": "Added clarification to notes in README.md",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T20:16:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9170464a0e0f17a5e23e1616a6929380d78ee758",
          "body": "Merging `2.5.2` changes from `dev` into `main`",
          "is_bot": false,
          "headline": "Merge pull request #201 from jolespin/dev",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T19:59:35Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6783f86061b1aaa58b1a4f7b8b7deffe2a954b2c",
          "body": "Merging `2.5.2` changes into `dev`",
          "is_bot": false,
          "headline": "Merge pull request #200 from jolespin/dev-v2.5.2",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T19:56:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "929e98c195b7e5adde6d756e81c1dd56a9b56263",
          "body": "….5.2.  I added a database section",
          "is_bot": false,
          "headline": "Just kidding.  This is actually the last update to CHANGELOG.md for 2…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T19:55:29Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "51e78585b618b3591745b3028e9361742c67cda7",
          "body": null,
          "is_bot": false,
          "headline": "Final update to CHANGELOG.md for 2.5.2",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T19:52:50Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9cee179bb5b63e9005e1ec5223691a0cf68de8a2",
          "body": null,
          "is_bot": false,
          "headline": "Updated CHANGELOG.md with 2.5.2 changes",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T19:47:54Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6a00308ddc0bfbdc0b0da53267a68ca4393c8e91",
          "body": null,
          "is_bot": false,
          "headline": "Updated bin/VEBA_SCRIPT_VERSIONS",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T18:55:35Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "3c27f3dc3d51c55dc5351298532247fa9a7c4b4e",
          "body": "…linking issue in mmseqs2 commands",
          "is_bot": false,
          "headline": "Added networkx and coreutils to VEBA-biosynthetic_env. Also fixed sym…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T18:46:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "610467ed3a36429f193aa7dbd64d50781ab4a7ff",
          "body": null,
          "is_bot": false,
          "headline": "Updated 2.5.1 to 2.5.2 in walkthroughs and README.md",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T04:31:55Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "0cdae9cbd32e89aee067bcd3ea44e1150451ecdf",
          "body": "…-DB_v9.1. Also added krona to VEBA_biosynthetic_env",
          "is_bot": false,
          "headline": "Reverted VEBA-DB_v9.2 back to VEBA-DB_9.1 because I never pushed VEBA…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-03T04:24:13Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "67ccb4883760d79b783a6587673b9f00a4f94810",
          "body": null,
          "is_bot": false,
          "headline": "Added biosynthetic test commands",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-02T22:36:18Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fb8c45882d72d0cbdd40c09ba9295b203eece8b6",
          "body": null,
          "is_bot": false,
          "headline": "Updated fastq_preprocessor version in VEBA-preprocess_env",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-02T21:44:40Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1aaef02fc267d5dd691e5520cf13773c1618fc55",
          "body": null,
          "is_bot": false,
          "headline": "Added some prospective changes in 2.6.0 and fixed some of the test files",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-02T21:43:22Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "24e7011c7b8e86391f7ab90dd233d8352186cabc",
          "body": "…ounts",
          "is_bot": false,
          "headline": "Fixed incorrect step in binning-eukaryotic.py after removing featureC…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-04-02T17:57:22Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "179a92d4789d28d93d0cbf9817da05339a6c72b8",
          "body": "…which drops `genopype` for `sh` and uses `fastplong` instead of `chopper`",
          "is_bot": false,
          "headline": "Updated `VEBA-preprocess_env` to use `fastq_preprocessor==2026.3.24` …",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-31T21:29:14Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "50f5a484ab0b3aa286e8394b38add81722a36ce2",
          "body": null,
          "is_bot": false,
          "headline": "* [2026.3.30] - Symlink genomes in  instead of copying genomes",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-31T00:34:22Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "49cb7fcd4b90f1e2a7fd9a844b66c715f7668112",
          "body": null,
          "is_bot": false,
          "headline": "Cleaned up database download scripts",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-31T00:14:08Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8e73292808ce9f85c830dabaca1f96f4bbb34892",
          "body": null,
          "is_bot": false,
          "headline": "* [2026.3.30] - Made  optional in  and not built by default in",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-30T23:41:36Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "3b9aa34cc67ed79648dcd4b4b68b70274ee5cccf",
          "body": null,
          "is_bot": false,
          "headline": "Updated the database build scripts",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-30T23:23:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "15313d3add2b265309f571574d7fdff98c03be76",
          "body": "…tps://github.com/jolespin/veba/issues/176)\n\n* [2026.3.30] - Updated `geNomad` version `1.11` to `1.12`\n* [2026.3.30] - `VEBA-DB_v9.2` contains the following updates: 1) `antiSMASH` version `7.x` to `8.x`; 2) `MIBiG` version `3.1` to `4.0` (required update in `annotate.py`); `CAZy` version `07262023\n[…]\nnload-antismash-databases` executable from `antiSMASH` in `download_databases-annotate.sh`\n* [2026.3.30] - Updated `antiSMASH` version `7.x` to `8.x` in `VEBA-biosynthetic_env` and `VEBA-database_env`",
          "is_bot": false,
          "headline": "* [2026.3.30] - Prepended `eval` to dispatch commands [issue/#176](ht…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-30T23:20:10Z",
          "body_truncated": true,
          "is_coding_agent": false
        },
        {
          "oid": "8688ab4225de666c25ca9605f5b6c39147138ee7",
          "body": "… the parsers...Fixed it.",
          "is_bot": false,
          "headline": "Metabat2 adds tabs IN THE FASTA HEADER and not spaces so this escapes…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-27T21:37:59Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f9bab06fdec33b3fe49558973c8e748421559986",
          "body": null,
          "is_bot": false,
          "headline": "Fixed `scaffolds_to_bins.py` header parsing",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-27T20:00:09Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4b1d5556f7a32bbb4132a1923ff79098c57a873b",
          "body": "…phylogeny.py`",
          "is_bot": false,
          "headline": "Changed default `--alignment_algorithm` from `align` to `super5` in `…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-27T18:11:28Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "617a84087eb95c9efd3b204ba74bbdb588a703e7",
          "body": "…ll revisit later).\n\n* Updated Metabat2 (2.17 -> 2.18) which adds descriptions to contigs requiring me to update `scaffolds_to_bins.py`\n* Updated `SemiBin2` (2.2.0 -> 2.2.1)\n* Removed `subread`\n* Update `VEBA-binning-prokaryotic_env.yml` to reflect the changes",
          "is_bot": false,
          "headline": "* Deprecated GPU environments but added README.md for GPU support (wi…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-27T17:44:34Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "56c8e86b33f89b82ed0adae498893a533635799f",
          "body": null,
          "is_bot": false,
          "headline": "Fixed identifier_mapping.tsv symlink issue",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-26T21:24:31Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "da215546c8f201379fe947a73c06850fdf9dbd86",
          "body": "…catenated so only the last file was being stored in `output/`",
          "is_bot": false,
          "headline": "Fixed bug where `identifier_mapping.tsv` was symlinked instead of con…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-25T16:14:28Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "04dc6404448745367160c58a3dc342fde5b9060d",
          "body": null,
          "is_bot": false,
          "headline": "Fixed barrnap and tRNAscan-SE offset from removing featureCounts",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-24T21:41:26Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "96d9aebe77b2740d45815ba708b747692eb9591e",
          "body": "…aming, output columns, and bin dereplication which required updating `binning-prokaryotic.py` and `filter_binette_results.tsv`.  Now `final_bins_quality_reports.tsv` is not changed to `quality_reports.tsv`. (UNTESTED)",
          "is_bot": false,
          "headline": "Updated `binette` from `1.1.1` to `1.2.1` which changes behavior of n…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-24T21:00:53Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6983a5af36b4e2d75bfad76c4a2902dd2598b317",
          "body": null,
          "is_bot": false,
          "headline": "Remove featureCounts from binning",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-03-24T16:10:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5db1a0bed7c17b0dba0d7c0f7e51b2c5d2c74a08",
          "body": null,
          "is_bot": false,
          "headline": "Updated CHANGELOG with plan for 2.5.2 and 2.6.0",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-02-08T21:10:40Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4a1e5af104bfbc78f5b2329248740bff53523c1a",
          "body": null,
          "is_bot": false,
          "headline": "Updated marker gene, ribokmers, and CAZy databases #issues/194",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-01-29T23:51:42Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e6c8b58552c963dc392aebb344e13d618fe5c432",
          "body": "…lusterblast.py`.",
          "is_bot": false,
          "headline": "Added `append_taxonomy_to_sylph_profile.py` and `reformat_antismash_c…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2026-01-20T21:25:55Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "c9ebf9eb6034546ee5d39f767a0d8c465b5711a0",
          "body": null,
          "is_bot": false,
          "headline": "Fixed subset_table.py bug in `--alow_missing_index",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-10-12T05:09:17Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b76d671694d6212a9101ec07784c06e29b77d20c",
          "body": "…in in classify-eukaryotic.py",
          "is_bot": false,
          "headline": "Fixed error that occurs when a eukaryotic HMM hits an organelle prote…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-10-12T04:54:03Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "cf9678b2f708b69e4851b0122ae40fe86c009f29",
          "body": null,
          "is_bot": false,
          "headline": "Fixed run scripts",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-10-12T04:42:12Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fbc54eb16dc411c932e9ffd36d497d89c4669056",
          "body": null,
          "is_bot": false,
          "headline": "Fixed `commands_file`",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-10-02T23:02:37Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1deea725ad4e8c91e05294f7374928e6477f1deb",
          "body": null,
          "is_bot": false,
          "headline": "Updated names of run scripts",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-10-02T23:00:04Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "c6178515ea9b971a1378bd862ffda07cbd5a3422",
          "body": null,
          "is_bot": false,
          "headline": "Updated version",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-10-02T21:33:11Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "ff19c6e66b6e7f578790bcb27ec1890e648ef540",
          "body": null,
          "is_bot": false,
          "headline": "Added dev scripts",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-10-02T21:32:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b39c68ceef854c789ea85fa00e390b7d70e9bf9a",
          "body": null,
          "is_bot": false,
          "headline": "Updated scripts",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-10-02T21:31:02Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "3817344492404fd17f3fe1969d5d95a645290bef",
          "body": null,
          "is_bot": false,
          "headline": "Updated CHANGELOG and version",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-10-02T21:25:15Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a121c197de2ccdfe60bab8a120c7ac44244566fb",
          "body": null,
          "is_bot": false,
          "headline": "added run scripts",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-10-02T21:22:10Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9ebfa76d8149a13d67aca6afd8598548ae193cd8",
          "body": null,
          "is_bot": false,
          "headline": "updated VEBA-classify-prokaryotic_env.yml to use GTDB-Tk 2.4.1",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-10-02T21:21:01Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a0f0046af5fa2eaa1c906c26d50c1d71b7ae7663",
          "body": "…ed VEBA-classify-viral-gpu_env support",
          "is_bot": false,
          "headline": "updated essentials to handle empty files for merge_statistics and add…",
          "author_name": "Josh Espinoza (lucid)",
          "author_login": "jolespin",
          "committed_at": "2025-07-24T18:39:14Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "eab4bb1f86f7b3e5c371eda22a43c12feaeca3a1",
          "body": null,
          "is_bot": false,
          "headline": "added preliminary scripts needed for unit-tests",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-06-26T19:10:01Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "52e26be36cf72ff2591b35fcb11059a99b75b6d2",
          "body": null,
          "is_bot": false,
          "headline": "updated gtdb-tk and gtdb to r226",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-05-29T20:12:09Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7f1e1e8acac38437edfbf03b3a11df64379acb12",
          "body": "…ng, and updated eukaryotic binning script",
          "is_bot": false,
          "headline": "added reading counting script, fixed error in uniref annotation parsi…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-05-26T22:16:42Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4b198b8142b80154637a8c5d1832d8824d5bc1e7",
          "body": null,
          "is_bot": false,
          "headline": "attempt #2 at solving #175",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-25T23:47:44Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "780d0d6c024be5d02acc5035e317733b78df807d",
          "body": null,
          "is_bot": false,
          "headline": "Potential fix for #175",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-25T22:15:30Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "51979fe310e16627ce964b2166b1816460d1501c",
          "body": null,
          "is_bot": false,
          "headline": "fixed featurecounts issue #173",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-24T21:51:16Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b489c257f645725326941df65f5552d6cff39aa1",
          "body": "…ssue #58",
          "is_bot": false,
          "headline": "Added support for binette failing at final stage because of Binette I…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-14T20:27:57Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "c146e891fe24173738c43f09f7da2bc8207b48fa",
          "body": "v2.5.1",
          "is_bot": false,
          "headline": "Merge pull request #169 from jolespin/dev",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-12T18:46:38Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "c4a6785d271b14f5ba6c188c76e2310527e3fd6c",
          "body": null,
          "is_bot": false,
          "headline": "updated date in changelog",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-12T18:46:05Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5d687b784b2864489bfa83656ccfadd452efd036",
          "body": null,
          "is_bot": false,
          "headline": "fixed VEBA-binning-viral-gpu_env.yml and install-gpu.sh",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-12T18:44:59Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d1ce6c70b1012a77a2c83f3138636aff10cb58fc",
          "body": null,
          "is_bot": false,
          "headline": "updated cpu-based environment yaml files",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-11T23:11:50Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f359be5e273da78232724dffb80b629c77f5d15d",
          "body": "added --algorithm for convenience in binning-viral.py",
          "is_bot": false,
          "headline": "Merge pull request #168 from jolespin/de",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-11T20:43:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d89d569e6a74865cddbe77d4b5c0d875942f7d78",
          "body": null,
          "is_bot": false,
          "headline": "added --algorithm for convenience in binning-viral.py",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-11T20:42:29Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5bf409f0e952af27dc8ce1fc687e79a2a9bb324b",
          "body": null,
          "is_bot": false,
          "headline": "Merge branch 'dev' of https://github.com/jolespin/veba into dev-v2.5.1",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-11T20:33:07Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "c0010265ee8ed0226bb44de27ca3b71d211666f1",
          "body": null,
          "is_bot": false,
          "headline": "add gpu and cpu installation and deprecating virfinder",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-11T20:31:06Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a1c40c212809a72350ca11cdea2e8a2db3abb5a6",
          "body": "Merge pull request #164 from jolespin/main",
          "is_bot": false,
          "headline": "Merge pull request #166 from jolespin/dev",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-10T20:55:17Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d082c22878e9d88ed22e50c2569c8f874ae6a5f8",
          "body": "consolidate main/dev",
          "is_bot": false,
          "headline": "Merge pull request #164 from jolespin/main",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-10T20:54:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "ad00b436f517271c5190e48361583c583e11cb2c",
          "body": "updated database.md",
          "is_bot": false,
          "headline": "Merge pull request #165 from jolespin/dev",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-10T20:54:22Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "479840d5a9a2e9d4f08473741dd1a24d1fc4a3c0",
          "body": null,
          "is_bot": false,
          "headline": "updated database.md",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-10T20:53:57Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "25a68ac5d3e054b04ddca9058eb7aa18b35202b5",
          "body": "v2.5.0",
          "is_bot": false,
          "headline": "Merge pull request #163 from jolespin/dev",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-10T20:48:03Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "bb80a1dac9a40179b07ab742dc95fcc2f0ca5b97",
          "body": null,
          "is_bot": false,
          "headline": "updated database documentation",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-10T20:36:41Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5a60901cbed63b2a03b215987dc63b84db4c2145",
          "body": "…_odb12 or optional automatic lineage in binning-eukaryotic.py",
          "is_bot": false,
          "headline": "added last minute change before release which allows for -l eukaryota…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-10T18:25:05Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "56688f7523e22d8be00d3390104474d2ccdb444b",
          "body": null,
          "is_bot": false,
          "headline": "fixed statistics table outputs in essentials.py",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-10T00:54:35Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9232f32d9ad3c4b218b1b7299d088a46b2057b82",
          "body": null,
          "is_bot": false,
          "headline": "removed -1 on contig size for vamb",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T22:26:20Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4790412860ce9ee2884c81b1cd0de97f6318d4c5",
          "body": "… > 1",
          "is_bot": false,
          "headline": "added coverage table subset for vamb so it doesn't fail on iterations…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T22:16:30Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7828563fb3486cf4420a8e32381ec39f232dcc6a",
          "body": "Added  executable check in binning-prokaryotic.py",
          "is_bot": false,
          "headline": "Merge pull request #162 from jolespin/dev-v2.5.0",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T07:31:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a2eafa7b3a0ecbfc5be29d45d9c8a9e3bd93de3c",
          "body": null,
          "is_bot": false,
          "headline": "Added  executable check in binning-prokaryotic.py",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T07:31:14Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "ca837e93498720f01130f8429f86760eecdad433",
          "body": "Dev v2.5.0",
          "is_bot": false,
          "headline": "Merge pull request #161 from jolespin/dev-v2.5.0",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T05:49:04Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4a1f4420c45273910619dad57acaac1f933fafd9",
          "body": "… of CHANGELOG",
          "is_bot": false,
          "headline": "Updated VEBA-binning-prokaryotic_env.yml with VAMB and changed format…",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T05:47:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d123f75e3ea65959254864c3f43a265e602adccf",
          "body": null,
          "is_bot": false,
          "headline": "fixed .fna issue in binning_wrapper.py and added --vamb_engine",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T04:48:11Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "163b040e29538322996332bb7eedc13ad221fd55",
          "body": null,
          "is_bot": false,
          "headline": "fixed .fna issue in binning_wrapper.py",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T03:54:22Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "efc9cf0cbce2bd81b21263d2d52590bc153513b4",
          "body": null,
          "is_bot": false,
          "headline": "updated binning-prokaryotic to include vamb in options",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T03:36:53Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "2c57bd735f0f3b4bb88fec6a90ac994c078a75d1",
          "body": null,
          "is_bot": false,
          "headline": "updated binning-prokaryotic to include vamb in options",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T03:34:34Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fe4fafecf892d794a2306f801ba60aa04f72a2bd",
          "body": null,
          "is_bot": false,
          "headline": "using existing bins for vamb",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T03:21:40Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "579a139dfd94c3194f9605263edafb84ba010b88",
          "body": null,
          "is_bot": false,
          "headline": "fixed partition_bins and finished binning-prokaryotic w/ vamb",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T03:15:40Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9deae06589d05f5f2d86ad049afdcb622c6f04ee",
          "body": null,
          "is_bot": false,
          "headline": "added --fasta to binning_wrapper vamb function",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T03:06:40Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "2fc8eb67876d61acd71ddc7d6ec6c2d25d673811",
          "body": null,
          "is_bot": false,
          "headline": "removed TMPDIR set because of",
          "author_name": "Josh L. Espinoza",
          "author_login": "jolespin",
          "committed_at": "2025-04-09T02:50:05Z",
          "body_truncated": false,
          "is_coding_agent": false
        }
      ],
      "releases_count": 27,
      "commits_last_year": 62,
      "latest_release_at": "2026-07-03T02:54:27Z",
      "latest_release_tag": "v2.5.3",
      "releases_from_tags": false,
      "days_since_last_push": 14,
      "active_weeks_last_year": 10,
      "days_since_latest_release": 24,
      "mean_days_between_releases": 83.7
    },
    "community": {
      "has_readme": true,
      "has_license": true,
      "has_description": true,
      "has_contributing": false,
      "health_percentage": 57,
      "has_issue_template": false,
      "has_code_of_conduct": false,
      "has_pull_request_template": false
    },
    "ecosystem": {
      "packages": []
    },
    "popularity": {
      "forks": 12,
      "stars": 105,
      "watchers": 4,
      "fork_history": {
        "days": [
          {
            "date": "2022-10-20",
            "count": 1
          },
          {
            "date": "2022-12-08",
            "count": 1
          },
          {
            "date": "2023-03-12",
            "count": 1
          },
          {
            "date": "2023-03-15",
            "count": 1
          },
          {
            "date": "2023-04-21",
            "count": 1
          },
          {
            "date": "2023-10-24",
            "count": 1
          },
          {
            "date": "2023-11-07",
            "count": 1
          },
          {
            "date": "2024-07-02",
            "count": 1
          },
          {
            "date": "2024-11-08",
            "count": 1
          },
          {
            "date": "2025-10-23",
            "count": 1
          },
          {
            "date": "2026-06-12",
            "count": 1
          },
          {
            "date": "2026-07-02",
            "count": 1
          }
        ],
        "complete": true,
        "collected": 12,
        "total_forks": 12
      },
      "star_history": null,
      "open_issues_and_prs": 21
    },
    "ai_readiness": {
      "has_nix": false,
      "example_dirs": [],
      "has_llms_txt": false,
      "has_dockerfile": true,
      "has_mcp_signal": false,
      "bootstrap_files": [],
      "api_schema_files": [],
      "has_devcontainer": false,
      "typecheck_configs": [],
      "toolchain_manifests": [],
      "largest_source_bytes": 78394,
      "source_files_sampled": 164,
      "oversized_source_files": 2,
      "agent_instruction_files": [],
      "agent_instruction_max_bytes": null
    },
    "dependencies": {
      "manifests": [],
      "advisories": {
        "error": null,
        "scope": null,
        "source": null,
        "findings": [],
        "collected": false,
        "malicious": [],
        "truncated": false,
        "by_severity": {},
        "advisory_count": 0,
        "affected_count": 0,
        "assessed_count": 0,
        "malicious_count": 0,
        "assessed_package": null,
        "unassessed_count": 0,
        "direct_affected_count": 0
      },
      "ecosystems": [],
      "dependencies": [],
      "all_dependencies": {
        "error": "GitHub dependency-graph SBOM unavailable (404); the dependency graph may be disabled for this repository",
        "source": null,
        "packages": [],
        "collected": false,
        "truncated": false,
        "total_count": null,
        "direct_count": null,
        "indirect_count": null
      }
    },
    "maintainership": {
      "issues": {
        "open_prs": 1,
        "merged_prs": 103,
        "open_issues": 20,
        "closed_ratio": 0.806,
        "closed_issues": 83,
        "closed_unmerged_prs": 3
      },
      "bus_factor": 1,
      "bot_contributors": 0,
      "top_contributors": [
        {
          "type": "User",
          "login": "jolespin",
          "commits": 595,
          "avatar_url": "https://avatars.githubusercontent.com/u/9061708?v=4"
        },
        {
          "type": "User",
          "login": "411an13",
          "commits": 9,
          "avatar_url": "https://avatars.githubusercontent.com/u/128341598?v=4"
        }
      ],
      "contributors_sampled": 2,
      "top_contributor_share": 0.985
    },
    "quality_signals": {
      "has_ci": false,
      "has_tests": false,
      "ci_workflows": [],
      "has_docs_dir": false,
      "linter_configs": [],
      "has_editorconfig": false,
      "has_linter_config": false,
      "has_precommit_config": false
    },
    "security_signals": {
      "lockfiles": [],
      "scorecard": {
        "checks": [
          {
            "name": "Binary-Artifacts",
            "score": 10,
            "reason": "no binaries found in the repo",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#binary-artifacts"
          },
          {
            "name": "Branch-Protection",
            "score": 0,
            "reason": "branch protection not enabled on development/release branches",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#branch-protection"
          },
          {
            "name": "CI-Tests",
            "score": 0,
            "reason": "0 out of 7 merged PRs checked by a CI test -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#ci-tests"
          },
          {
            "name": "CII-Best-Practices",
            "score": 0,
            "reason": "no effort to earn an OpenSSF best practices badge detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#cii-best-practices"
          },
          {
            "name": "Code-Review",
            "score": 1,
            "reason": "Found 1/7 approved changesets -- score normalized to 1",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#code-review"
          },
          {
            "name": "Contributors",
            "score": 0,
            "reason": "project has 0 contributing companies or organizations -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#contributors"
          },
          {
            "name": "Dangerous-Workflow",
            "score": null,
            "reason": "no workflows found",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dangerous-workflow"
          },
          {
            "name": "Dependency-Update-Tool",
            "score": 0,
            "reason": "no update tool detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dependency-update-tool"
          },
          {
            "name": "Fuzzing",
            "score": 0,
            "reason": "project is not fuzzed",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#fuzzing"
          },
          {
            "name": "License",
            "score": 10,
            "reason": "license file detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#license"
          },
          {
            "name": "Maintained",
            "score": 10,
            "reason": "14 commit(s) and 3 issue activity found in the last 90 days -- score normalized to 10",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#maintained"
          },
          {
            "name": "Packaging",
            "score": null,
            "reason": "packaging workflow not detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#packaging"
          },
          {
            "name": "Pinned-Dependencies",
            "score": 0,
            "reason": "dependency not pinned by hash detected -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#pinned-dependencies"
          },
          {
            "name": "SAST",
            "score": 0,
            "reason": "SAST tool is not run on all commits -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#sast"
          },
          {
            "name": "Security-Policy",
            "score": 0,
            "reason": "security policy file not detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#security-policy"
          },
          {
            "name": "Signed-Releases",
            "score": 0,
            "reason": "Project has not signed or included provenance with any releases.",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#signed-releases"
          },
          {
            "name": "Token-Permissions",
            "score": null,
            "reason": "No tokens found",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#token-permissions"
          },
          {
            "name": "Vulnerabilities",
            "score": 10,
            "reason": "0 existing vulnerabilities detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#vulnerabilities"
          }
        ],
        "commit": "ceab34424cee16ec2fb8c16285c1e6afe81e6af9",
        "ran_at": "2026-07-28T02:49:09Z",
        "aggregate_score": 3.1,
        "scorecard_version": "v5.5.0"
      },
      "has_codeql_workflow": false,
      "has_security_policy": false,
      "has_dependabot_config": false
    },
    "contribution_flow": {
      "collected": true,
      "ci_last_run_at": "2026-07-03T02:53:47Z",
      "oldest_open_prs": [
        {
          "number": 184,
          "created_at": "2025-06-11T03:12:33Z",
          "last_comment_at": "2025-06-16T19:36:29Z",
          "last_comment_author": "jolespin"
        }
      ],
      "last_merged_pr_at": "2026-07-03T02:53:46Z",
      "ci_last_conclusion": null,
      "oldest_open_issues": [
        {
          "number": 35,
          "created_at": "2023-11-16T12:33:26Z",
          "last_comment_at": "2024-06-05T19:37:42Z",
          "last_comment_author": "franlat"
        },
        {
          "number": 95,
          "created_at": "2024-05-15T12:52:42Z",
          "last_comment_at": "2024-05-21T15:26:09Z",
          "last_comment_author": "jolespin"
        },
        {
          "number": 142,
          "created_at": "2025-02-20T00:07:25Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 152,
          "created_at": "2025-03-22T20:33:25Z",
          "last_comment_at": "2025-03-22T21:52:42Z",
          "last_comment_author": "jolespin"
        },
        {
          "number": 157,
          "created_at": "2025-04-02T23:11:18Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 171,
          "created_at": "2025-04-24T17:55:32Z",
          "last_comment_at": "2025-04-24T21:58:40Z",
          "last_comment_author": "jolespin"
        },
        {
          "number": 174,
          "created_at": "2025-04-24T22:56:15Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 179,
          "created_at": "2025-05-22T20:37:37Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 180,
          "created_at": "2025-05-25T21:02:04Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 182,
          "created_at": "2025-05-30T19:19:23Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 183,
          "created_at": "2025-05-30T21:27:28Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 185,
          "created_at": "2025-06-20T16:47:16Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 186,
          "created_at": "2025-06-24T01:16:23Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 189,
          "created_at": "2025-06-29T21:19:54Z",
          "last_comment_at": "2025-07-02T02:23:47Z",
          "last_comment_author": "jolespin"
        },
        {
          "number": 190,
          "created_at": "2025-07-18T18:30:49Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 191,
          "created_at": "2025-09-24T14:41:42Z",
          "last_comment_at": "2025-09-24T14:46:07Z",
          "last_comment_author": "jolespin"
        },
        {
          "number": 192,
          "created_at": "2025-12-03T16:52:57Z",
          "last_comment_at": "2026-02-28T22:58:02Z",
          "last_comment_author": "franlat"
        },
        {
          "number": 199,
          "created_at": "2026-04-02T19:04:26Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 205,
          "created_at": "2026-04-17T00:35:04Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 206,
          "created_at": "2026-04-27T16:13:08Z",
          "last_comment_at": null,
          "last_comment_author": null
        }
      ]
    }
  },
  "config": {
    "disabled_metrics": [],
    "disabled_categories": [],
    "disabled_components": {}
  },
  "source": {
    "url": "https://github.com/jolespin/veba",
    "host": "github.com",
    "name": "veba",
    "owner": "jolespin"
  },
  "metrics": {
    "overall": {
      "key": "overall",
      "band": "at_risk",
      "name": "Overall health",
      "note": null,
      "notes": [],
      "value": 45,
      "inputs": {
        "security": 31,
        "vitality": 70,
        "community": 47,
        "governance": 47,
        "engineering": 25
      },
      "components": []
    },
    "categories": [
      {
        "key": "vitality",
        "band": "good",
        "name": "Vitality",
        "value": 70,
        "weight": 0.22,
        "metrics": [
          {
            "key": "development_activity",
            "band": "moderate",
            "name": "Development activity",
            "note": null,
            "notes": [],
            "value": 62,
            "inputs": {
              "commits_last_year": 62,
              "human_commit_share": 1,
              "days_since_last_push": 14,
              "active_weeks_last_year": 10
            },
            "components": [
              {
                "key": "push_recency",
                "name": "Push recency",
                "detail": "last push 14 days ago",
                "points": 28.8,
                "status": "partial",
                "details": [
                  {
                    "code": "push_recency",
                    "params": {
                      "days": 14
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_cadence",
                "name": "Commit cadence",
                "detail": "10/52 weeks with commits",
                "points": 6.9,
                "status": "partial",
                "details": [
                  {
                    "code": "commit_cadence_weeks",
                    "params": {
                      "weeks": 10
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_volume",
                "name": "Commit volume",
                "detail": "62 commits in the last year",
                "points": 16.2,
                "status": "partial",
                "details": [
                  {
                    "code": "commits_last_year",
                    "params": {
                      "count": 62
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "openssf_scorecard_maintained",
                "name": "OpenSSF Scorecard: Maintained",
                "detail": "14 commit(s) and 3 issue activity found in the last 90 days -- score normalized to 10",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "release_discipline",
            "band": "good",
            "name": "Release discipline",
            "note": null,
            "notes": [],
            "value": 83,
            "inputs": {
              "releases_count": 27,
              "latest_release_tag": "v2.5.3",
              "releases_from_tags": false,
              "days_since_latest_release": 24,
              "mean_days_between_releases": 83.7
            },
            "components": [
              {
                "key": "ships_releases",
                "name": "Ships releases",
                "detail": "27 releases published",
                "points": 27,
                "status": "met",
                "details": [
                  {
                    "code": "releases_published",
                    "params": {
                      "count": 27
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "release_recency",
                "name": "Release recency",
                "detail": "latest release 24 days ago",
                "points": 36,
                "status": "met",
                "details": [
                  {
                    "code": "release_recency",
                    "params": {
                      "days": 24
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "release_cadence",
                "name": "Release cadence",
                "detail": "a release every ~83.7 days",
                "points": 19.8,
                "status": "partial",
                "details": [
                  {
                    "code": "release_cadence",
                    "params": {
                      "gap": 83.7
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "openssf_scorecard_signed_releases",
                "name": "OpenSSF Scorecard: Signed-Releases",
                "detail": "Project has not signed or included provenance with any releases.",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "abandonment",
            "band": "excellent",
            "name": "Abandonment",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "cap": null,
              "state": "maintained",
              "guards": [],
              "signals": [],
              "red_flag": false,
              "multiplier_pct": 100,
              "declared_reason": null,
              "unverified_reason": null,
              "unanswered_open_prs": null,
              "unanswered_open_issues": null,
              "days_since_last_merged_pr": null,
              "days_since_last_human_commit": 24,
              "days_since_last_human_commit_is_floor": false
            },
            "components": [
              {
                "key": "project_is_still_maintained",
                "name": "Project is still maintained",
                "detail": "last human commit 24 days ago",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "abandonment_maintained",
                    "params": {
                      "days": 24
                    }
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Is the project alive — is code being written and are releases shipping?"
      },
      {
        "key": "community",
        "band": "at_risk",
        "name": "Community & Adoption",
        "value": 47,
        "weight": 0.18,
        "metrics": [
          {
            "key": "popularity",
            "band": "at_risk",
            "name": "Popularity & adoption",
            "note": null,
            "notes": [],
            "value": 44,
            "inputs": {
              "forks": 12,
              "stars": 105,
              "watchers": 4,
              "growth_state": "unverified",
              "growth_factor_pct": 100,
              "growth_unverified_reason": "no_history"
            },
            "components": [
              {
                "key": "stars",
                "name": "Stars",
                "detail": "105 stars",
                "points": 32.7,
                "status": "partial",
                "details": [
                  {
                    "code": "stars",
                    "params": {
                      "count": 105
                    }
                  }
                ],
                "max_points": 60
              },
              {
                "key": "forks",
                "name": "Forks",
                "detail": "12 forks",
                "points": 8.7,
                "status": "partial",
                "details": [
                  {
                    "code": "forks",
                    "params": {
                      "count": 12
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "watchers",
                "name": "Watchers",
                "detail": "4 watchers",
                "points": 2.7,
                "status": "partial",
                "details": [
                  {
                    "code": "watchers",
                    "params": {
                      "count": 4
                    }
                  }
                ],
                "max_points": 15
              }
            ]
          },
          {
            "key": "community_health",
            "band": "moderate",
            "name": "Community health",
            "note": null,
            "notes": [],
            "value": 50,
            "inputs": {
              "has_readme": true,
              "has_license": true,
              "has_contributing": false,
              "has_issue_template": false,
              "has_code_of_conduct": false,
              "has_pull_request_template": false
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 22.5,
                "status": "met",
                "details": [],
                "max_points": 22.5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "recognized license (AGPL-3.0)",
                "points": 22.5,
                "status": "met",
                "details": [
                  {
                    "code": "license_standard",
                    "params": {}
                  },
                  {
                    "code": "license_spdx",
                    "params": {
                      "spdx": "AGPL-3.0"
                    }
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributing_guide",
                "name": "CONTRIBUTING guide",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 18
              },
              {
                "key": "code_of_conduct",
                "name": "Code of conduct",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 13.5
              },
              {
                "key": "issue_template",
                "name": "Issue template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.2
              },
              {
                "key": "pr_template",
                "name": "PR template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.3
              }
            ]
          }
        ],
        "description": "Does the project have users, downloads, attention, and a welcoming setup for contributors?"
      },
      {
        "key": "governance",
        "band": "at_risk",
        "name": "Sustainability & Governance",
        "value": 47,
        "weight": 0.24,
        "metrics": [
          {
            "key": "maintainer_resilience",
            "band": "critical",
            "name": "Maintainer resilience (bus factor)",
            "note": null,
            "notes": [],
            "value": 12,
            "inputs": {
              "bus_factor": 1,
              "contributors_sampled": 2,
              "top_contributor_share": 0.985
            },
            "components": [
              {
                "key": "bus_factor",
                "name": "Bus factor",
                "detail": "1 contributor(s) cover half of all commits",
                "points": 9,
                "status": "partial",
                "details": [
                  {
                    "code": "bus_factor",
                    "params": {
                      "count": 1
                    }
                  }
                ],
                "max_points": 54
              },
              {
                "key": "commit_distribution",
                "name": "Commit distribution",
                "detail": "top contributor authored 98% of commits",
                "points": 0.3,
                "status": "partial",
                "details": [
                  {
                    "code": "top_contributor_share",
                    "params": {
                      "share": 98
                    }
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributor_breadth",
                "name": "Contributor breadth",
                "detail": "2 contributors",
                "points": 2.7,
                "status": "partial",
                "details": [
                  {
                    "code": "contributors_sampled",
                    "params": {
                      "count": 2
                    }
                  }
                ],
                "max_points": 13.5
              },
              {
                "key": "openssf_scorecard_contributors",
                "name": "OpenSSF Scorecard: Contributors",
                "detail": "project has 0 contributing companies or organizations -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "responsiveness",
            "band": "good",
            "name": "Issue & PR responsiveness",
            "note": null,
            "notes": [],
            "value": 76,
            "inputs": {
              "merged_prs": 103,
              "open_issues": 20,
              "closed_issues": 83,
              "issue_closed_ratio": 0.806,
              "closed_unmerged_prs": 3
            },
            "components": [
              {
                "key": "issue_resolution",
                "name": "Issue resolution",
                "detail": "81% of issues closed",
                "points": 37.7,
                "status": "partial",
                "details": [
                  {
                    "code": "issues_closed_share",
                    "params": {
                      "share": 81
                    }
                  }
                ],
                "max_points": 46.75
              },
              {
                "key": "pr_acceptance",
                "name": "PR acceptance",
                "detail": "103/106 decided PRs merged",
                "points": 37.2,
                "status": "partial",
                "details": [
                  {
                    "code": "decided_prs_merged",
                    "params": {
                      "merged": 103,
                      "decided": 106
                    }
                  }
                ],
                "max_points": 38.25
              },
              {
                "key": "openssf_scorecard_code_review",
                "name": "OpenSSF Scorecard: Code-Review",
                "detail": "Found 1/7 approved changesets -- score normalized to 1",
                "points": 1.5,
                "status": "partial",
                "details": [],
                "max_points": 15
              }
            ]
          },
          {
            "key": "stewardship",
            "band": "moderate",
            "name": "Ownership & stewardship",
            "note": "Excluded from scoring (no data or not applicable): Verified domain. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "verified_domain"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 61,
            "inputs": {
              "followers": 93,
              "owner_type": "User",
              "is_verified": null,
              "owner_login": "jolespin",
              "public_repos": 50,
              "account_age_days": 4311
            },
            "components": [
              {
                "key": "ownership_backing",
                "name": "Ownership backing",
                "detail": "personal (user) account",
                "points": 10,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_personal",
                    "params": {}
                  }
                ],
                "max_points": 30
              },
              {
                "key": "verified_domain",
                "name": "Verified domain",
                "detail": "not applicable to user accounts",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "not_applicable_to_user_accounts",
                    "params": {}
                  }
                ],
                "max_points": 20
              },
              {
                "key": "owner_reach",
                "name": "Owner reach",
                "detail": "93 followers of jolespin",
                "points": 14.2,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_followers",
                    "params": {
                      "count": 93,
                      "login": "jolespin"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "track_record",
                "name": "Track record",
                "detail": "50 public repos, account ~11 yr old",
                "points": 24.4,
                "status": "partial",
                "details": [
                  {
                    "code": "public_repos",
                    "params": {
                      "count": 50
                    }
                  },
                  {
                    "code": "account_age_years",
                    "params": {
                      "years": 11
                    }
                  }
                ],
                "max_points": 25
              }
            ]
          }
        ],
        "description": "Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?"
      },
      {
        "key": "engineering",
        "band": "critical",
        "name": "Engineering Quality",
        "value": 25,
        "weight": 0.2,
        "metrics": [
          {
            "key": "engineering_practices",
            "band": "critical",
            "name": "Engineering practices",
            "note": null,
            "notes": [],
            "value": 1,
            "inputs": {
              "has_ci": false,
              "has_tests": false,
              "has_editorconfig": false,
              "has_linter_config": false,
              "has_precommit_config": false
            },
            "components": [
              {
                "key": "ci_workflows",
                "name": "CI workflows",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 24
              },
              {
                "key": "tests_present",
                "name": "Tests present",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 24
              },
              {
                "key": "linter_config",
                "name": "Linter config",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 16
              },
              {
                "key": "pre_commit_hooks",
                "name": "Pre-commit hooks",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 9.6
              },
              {
                "key": "editorconfig",
                "name": ".editorconfig",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.4
              },
              {
                "key": "openssf_scorecard_ci_tests",
                "name": "OpenSSF Scorecard: CI-Tests",
                "detail": "0 out of 7 merged PRs checked by a CI test -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              }
            ]
          },
          {
            "key": "documentation",
            "band": "moderate",
            "name": "Documentation",
            "note": null,
            "notes": [],
            "value": 60,
            "inputs": {
              "topics": [
                "bioinformatics",
                "genomics",
                "metagenomics",
                "metatranscriptomics",
                "microbial",
                "microbiome"
              ],
              "has_wiki": true,
              "homepage": null,
              "has_readme": true,
              "has_docs_dir": false,
              "has_description": true
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 30,
                "status": "met",
                "details": [],
                "max_points": 30
              },
              {
                "key": "documentation_directory",
                "name": "Documentation directory",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 25
              },
              {
                "key": "documentation_homepage_site",
                "name": "Documentation / homepage site",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              },
              {
                "key": "repository_description",
                "name": "Repository description",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "topics",
                "name": "Topics",
                "detail": "6 topics",
                "points": 10,
                "status": "met",
                "details": [
                  {
                    "code": "topics_count",
                    "params": {
                      "count": 6
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "wiki",
                "name": "Wiki",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          }
        ],
        "description": "Are baseline engineering and documentation practices in place?"
      },
      {
        "key": "security",
        "band": "at_risk",
        "name": "Security",
        "value": 31,
        "weight": 0.16,
        "metrics": [
          {
            "key": "security_posture",
            "band": "at_risk",
            "name": "Security posture",
            "note": "Excluded from scoring (no data or not applicable): Dangerous-Workflow, Packaging, Token-Permissions. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "dangerous_workflow",
                    "packaging",
                    "token_permissions"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 31,
            "inputs": {
              "source": "openssf_scorecard",
              "checks_evaluated": 15,
              "scorecard_version": "v5.5.0",
              "checks_inconclusive": 3,
              "scorecard_aggregate": 3.1
            },
            "components": [
              {
                "key": "binary_artifacts",
                "name": "Binary-Artifacts",
                "detail": "no binaries found in the repo",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "branch_protection",
                "name": "Branch-Protection",
                "detail": "branch protection not enabled on development/release branches",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "ci_tests",
                "name": "CI-Tests",
                "detail": "0 out of 7 merged PRs checked by a CI test -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "cii_best_practices",
                "name": "CII-Best-Practices",
                "detail": "no effort to earn an OpenSSF best practices badge detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "code_review",
                "name": "Code-Review",
                "detail": "Found 1/7 approved changesets -- score normalized to 1",
                "points": 0.8,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "contributors",
                "name": "Contributors",
                "detail": "project has 0 contributing companies or organizations -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "dangerous_workflow",
                "name": "Dangerous-Workflow",
                "detail": "no workflows found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              },
              {
                "key": "dependency_update_tool",
                "name": "Dependency-Update-Tool",
                "detail": "no update tool detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "fuzzing",
                "name": "Fuzzing",
                "detail": "project is not fuzzed",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "license file detected",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "maintained",
                "name": "Maintained",
                "detail": "14 commit(s) and 3 issue activity found in the last 90 days -- score normalized to 10",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "packaging",
                "name": "Packaging",
                "detail": "packaging workflow not detected",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 5
              },
              {
                "key": "pinned_dependencies",
                "name": "Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "sast",
                "name": "SAST",
                "detail": "SAST tool is not run on all commits -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "security_policy",
                "name": "Security-Policy",
                "detail": "security policy file not detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "signed_releases",
                "name": "Signed-Releases",
                "detail": "Project has not signed or included provenance with any releases.",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "token_permissions",
                "name": "Token-Permissions",
                "detail": "No tokens found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "vulnerabilities",
                "name": "Vulnerabilities",
                "detail": "0 existing vulnerabilities detected",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              }
            ]
          },
          {
            "key": "high_risk_jurisdiction_exposure",
            "band": "excellent",
            "name": "High-Risk Jurisdiction Exposure",
            "note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
            "notes": [
              {
                "code": "jurisdiction_evidence_limits",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "meaning": "self-published location evidence; not nationality or citizenship",
              "red_flag": false,
              "exposures": [],
              "policy_countries": [
                "Russia",
                "Iran",
                "North Korea"
              ],
              "review_only_matches": 0,
              "assessed_self_published_locations": 3
            },
            "components": [
              {
                "key": "policy_exposure_multiplier",
                "name": "Policy exposure multiplier",
                "detail": "no confirmed policy-scope location match",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "jurisdiction_no_match",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
      },
      {
        "key": "ai_readiness",
        "band": "critical",
        "name": "AI Readiness",
        "value": 20,
        "weight": 0,
        "metrics": [
          {
            "key": "ai_agent_context",
            "band": "critical",
            "name": "Agent context & guidance",
            "note": null,
            "notes": [],
            "value": 16,
            "inputs": {
              "has_llms_txt": false,
              "legible_history_share": 0.3,
              "agent_instruction_files": [],
              "agent_instruction_max_bytes": null
            },
            "components": [
              {
                "key": "agent_instructions",
                "name": "Agent instructions",
                "detail": "no CLAUDE.md / AGENTS.md / editor rules",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_instructions",
                    "params": {}
                  }
                ],
                "max_points": 45
              },
              {
                "key": "machine_readable_docs_llms_txt",
                "name": "Machine-readable docs (llms.txt)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              },
              {
                "key": "legible_commit_history",
                "name": "Legible commit history",
                "detail": "30 of 100 human commits state their intent (structured subject or explanatory body)",
                "points": 16,
                "status": "partial",
                "details": [
                  {
                    "code": "legible_history",
                    "params": {
                      "legible": 30,
                      "sampled": 100
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "ai_verify_loop",
            "band": "critical",
            "name": "Verify loop (build / test / typecheck)",
            "note": null,
            "notes": [],
            "value": 10,
            "inputs": {
              "has_nix": false,
              "has_tests": false,
              "lockfiles": [],
              "has_dockerfile": true,
              "typed_language": false,
              "bootstrap_files": [],
              "has_devcontainer": false,
              "has_linter_config": false,
              "typecheck_configs": [],
              "agent_commit_share": 0,
              "toolchain_manifests": [],
              "dependency_bot_commit_share": 0
            },
            "components": [
              {
                "key": "one_command_bootstrap",
                "name": "One-command bootstrap",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 18
              },
              {
                "key": "automated_tests",
                "name": "Automated tests",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 22
              },
              {
                "key": "lint_format_config",
                "name": "Lint / format config",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "static_type_checking",
                "name": "Static type checking",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "reproducible_environment",
                "name": "Reproducible environment",
                "detail": "Dockerfile",
                "points": 10,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "Dockerfile"
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "demonstrated_agent_practice",
                "name": "Demonstrated agent practice",
                "detail": "no agent-authored commits among the last 100",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_authored_commits",
                    "params": {
                      "sampled": 100
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "automated_maintenance",
                "name": "Automated maintenance",
                "detail": "no automated dependency updates observed",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_dependency_automation",
                    "params": {}
                  }
                ],
                "max_points": 8
              },
              {
                "key": "openssf_scorecard_pinned_dependencies",
                "name": "OpenSSF Scorecard: Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "ai_code_legibility",
            "band": "moderate",
            "name": "Code legibility for models",
            "note": null,
            "notes": [],
            "value": 54,
            "inputs": {
              "primary_language": "Python",
              "largest_source_bytes": 78394,
              "source_files_sampled": 164,
              "oversized_source_files": 2
            },
            "components": [
              {
                "key": "type_checkable_code",
                "name": "Type-checkable code",
                "detail": "Python without a type-check config",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_typecheck_config_language",
                    "params": {
                      "language": "Python"
                    }
                  }
                ],
                "max_points": 45
              },
              {
                "key": "manageable_file_sizes",
                "name": "Manageable file sizes",
                "detail": "2/164 source files over 60KB",
                "points": 54.3,
                "status": "partial",
                "details": [
                  {
                    "code": "oversized_source_files",
                    "params": {
                      "kb": 60,
                      "sampled": 164,
                      "oversized": 2
                    }
                  }
                ],
                "max_points": 55
              }
            ]
          }
        ],
        "description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
      }
    ],
    "metrics_version": "1.13.0"
  },
  "warnings": [
    "Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token",
    "GitHub dependency-graph SBOM unavailable (404); the dependency graph may be disabled for this repository"
  ],
  "report_type": "repository",
  "generated_at": "2026-07-28T02:49:25.176117Z",
  "schema_version": "0.27.0",
  "badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/j/jolespin/veba.svg",
  "full_name": "jolespin/veba",
  "license_state": "standard",
  "license_spdx": "AGPL-3.0"
}

Las puntuaciones son señales, no garantías. Reflejan prácticas públicamente visibles en GitHub; no son una auditoría de código ni una garantía de seguridad.

Los datos ausentes se excluyen y los pesos se renormalizan; nunca se puntúan como cero. La metodología es versionada y abierta: métricas v1.13.0, esquema v0.27.0 — metodología completa · wiki de métricas.

Cómo se sitúa un resultado dentro del registro general: estadísticas agregadas.