Public recordGood
Software health reportschema 0.23.0 · metrics 1.13.0 · 2026-07-21 21:22 UTC
saezlab / liana-py
LIANA+: an all-in-one framework for cell-cell communication
saezlab/liana-py holds a health index of 74 out of 100, placing it in the Good band. It scores highest on Engineering Quality (96/100) and lowest on AI Readiness (38/100). It was last updated 5 days ago. A single contributor accounts for most of its recent work.
74
overall / 100Software health index
Metrics are grouped into weighted categories on one standardized 1–100 scale. Overall starts as their weighted mean; when public evidence triggers the High-Risk Jurisdiction Policy, the rating is adjusted and receives an At risk ceiling of 49. AI Readiness sits outside the overall score.
74
Excellent85-100Exemplary; meets essentially all checked criteria
Good70-84Healthy; minor gaps
Moderate50-69Acceptable with notable gaps; review recommended
At risk30-49Significant weaknesses; adoption warrants caution
Critical1-29Severe problems (abandoned, single-maintainer, no hygiene)
Score profile
Each axis is a category. The shape matters more than the average — a healthy subject fills the whole shape, while a spike-and-crater profile means strength in one dimension is masking risk in another.
Ownership
Saez LabOrganization
487 followers306 public repossince Nov 2014
This repository is backed by an organization — shared, accountable stewardship that can outlive any single maintainer.
Package ecosystems
| Registry | Package | Version | Downloads / mo | Versions | Last publish |
|---|---|---|---|---|---|
| PyPI | liana | 1.8.1 | - | 29 | 5 days ago |
Metrics by category
Vitality
Is the project alive — is code being written and are releases shipping?
84
Development activity
79Good
How it's scored
| 36/36 | Push recency — last push 5 days ago |
| 15.2/36 | Commit cadence — 22/52 weeks with commits |
| 18/18 | Commit volume — 181 commits in the last year |
| 10/10 | OpenSSF Scorecard: Maintained — 30 commit(s) and 7 issue activity found in the last 90 days -- score normalized to 10 |
Inputs used
| commits_last_year | 181 |
| human_commit_share | 0.97 |
| days_since_last_push | 5 |
| active_weeks_last_year | 22 |
Release discipline
92Excellent
How it's scored
| 27/27 | Ships releases — 24 releases published |
| 36/36 | Release recency — latest release 5 days ago |
| 19.8/27 | Release cadence — a release every ~60.5 days |
| 0/10 | OpenSSF Scorecard: Signed-Releases — no data |
Inputs used
| releases_count | 24 |
| latest_release_tag | v1.8.1 |
| releases_from_tags | no |
| days_since_latest_release | 5 |
| mean_days_between_releases | 60.5 |
Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Signed-Releases. Remaining weights renormalized.
Community & Adoption
Does the project have users, downloads, attention, and a welcoming setup for contributors?
61
Popularity & adoption
53Moderate
How it's scored
| 40.3/60 | Stars — 305 stars |
| 12.7/25 | Forks — 34 forks |
| 0/15 | Watchers — 1 watchers |
Inputs used
| forks | 34 |
| stars | 305 |
| watchers | 1 |
| growth_state | organic |
| growth_factor_pct | 100 |
Community health
70Good
How it's scored
| 22.5/22.5 | README |
| 22.5/22.5 | License — recognized license (BSD-3-Clause) |
| 18/18 | CONTRIBUTING guide |
| 0/13.5 | Code of conduct |
| 0/7.2 | Issue template |
| 0/6.3 | PR template |
Inputs used
| has_readme | yes |
| has_license | yes |
| has_contributing | yes |
| has_issue_template | no |
| has_code_of_conduct | no |
| has_pull_request_template | no |
Sustainability & Governance
Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?
68
Maintainer resilience (bus factor)
41At risk
How it's scored
| 9/54 | Bus factor — 1 contributor(s) cover half of all commits |
| 8.8/22.5 | Commit distribution — top contributor authored 61% of commits |
| 13.5/13.5 | Contributor breadth — 16 contributors |
| 10/10 | OpenSSF Scorecard: Contributors — project has 15 contributing companies or organizations |
Inputs used
| bus_factor | 1 |
| contributors_sampled | 16 |
| top_contributor_share | 0.608 |
How it's scored
| 39.7/46.8 | Issue resolution — 85% of issues closed |
| 27.5/38.3 | PR acceptance — 46/64 decided PRs merged |
| 3/15 | OpenSSF Scorecard: Code-Review — Found 2/7 approved changesets -- score normalized to 2 |
Inputs used
| merged_prs | 46 |
| open_issues | 27 |
| closed_issues | 153 |
| issue_closed_ratio | 0.85 |
| closed_unmerged_prs | 18 |
Ownership & stewardship
74Good
How it's scored
| 30/30 | Ownership backing — organization-owned |
| 0/20 | Verified domain |
| 19.3/25 | Owner reach — 487 followers of saezlab |
| 25/25 | Track record — 306 public repos, account ~11 yr old |
Inputs used
| followers | 487 |
| owner_type | Organization |
| is_verified | — |
| owner_login | saezlab |
| public_repos | 306 |
| account_age_days | 4,254 |
Package maintenance
100Excellent
How it's scored
| 25/25 | Published & resolvable — 1 package(s) on pypi |
| 35/35 | Publish recency — latest publish 5 days ago |
| 20/20 | Version history — 29 published versions |
| 20/20 | Not deprecated — active, not deprecated or yanked |
Inputs used
| packages | liana |
| ecosystems | pypi |
| any_deprecated | no |
| min_days_since_publish | 5 |
Engineering Quality
Are baseline engineering and documentation practices in place?
96
Engineering practices
94Excellent
How it's scored
| 24/24 | CI workflows — 3 workflow(s) |
| 24/24 | Tests present |
| 16/16 | Linter config |
| 9.6/9.6 | Pre-commit hooks |
| 0/6.4 | .editorconfig |
| 20/20 | OpenSSF Scorecard: CI-Tests — 4 out of 4 merged PRs checked by a CI test -- score normalized to 10 |
Inputs used
| has_ci | yes |
| has_tests | yes |
| has_editorconfig | no |
| has_linter_config | yes |
| has_precommit_config | yes |
Documentation
100Excellent
How it's scored
| 30/30 | README |
| 25/25 | Documentation directory |
| 15/15 | Documentation / homepage site — http://liana-py.readthedocs.io/ |
| 10/10 | Repository description |
| 10/10 | Topics — 7 topics |
| 10/10 | Wiki |
Inputs used
| topics | cell-cell-communication, ligand-receptor, python, single-cell, single-cell-rna-seq, spatial, spatialomics |
| has_wiki | yes |
| homepage | http://liana-py.readthedocs.io/ |
| has_readme | yes |
| has_docs_dir | yes |
| has_description | yes |
Security
Are visible security and supply-chain practices strong, without unresolved high-risk jurisdiction exposure?
54
Security posture
43At risk
How it's scored
| 7.5/7.5 | Binary-Artifacts — no binaries found in the repo |
| 0/7.5 | Branch-Protection — no data |
| 2.5/2.5 | CI-Tests — 4 out of 4 merged PRs checked by a CI test -- score normalized to 10 |
| 0/2.5 | CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected |
| 1.5/7.5 | Code-Review — Found 2/7 approved changesets -- score normalized to 2 |
| 2.5/2.5 | Contributors — project has 15 contributing companies or organizations |
| 10/10 | Dangerous-Workflow — no dangerous workflow patterns detected |
| 0/7.5 | Dependency-Update-Tool — no update tool detected |
| 0/5 | Fuzzing — project is not fuzzed |
| 2.5/2.5 | License — license file detected |
| 7.5/7.5 | Maintained — 30 commit(s) and 7 issue activity found in the last 90 days -- score normalized to 10 |
| 5/5 | Packaging — packaging workflow detected |
| 0/5 | Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
| 0/5 | SAST — SAST tool is not run on all commits -- score normalized to 0 |
| 0/5 | Security-Policy — security policy file not detected |
| 0/7.5 | Signed-Releases — no data |
| 0/7.5 | Token-Permissions — detected GitHub workflow tokens with excessive permissions |
| 0/7.5 | Vulnerabilities — 41 existing vulnerabilities detected |
Inputs used
| source | openssf_scorecard |
| checks_evaluated | 16 |
| scorecard_version | v5.5.0 |
| checks_inconclusive | 2 |
| scorecard_aggregate | 4.3 |
Excluded from scoring (no data or not applicable): branch_protection, signed_releases. Remaining weights renormalized.
Dependency advisories
100Excellent
How it's scored
| 35/35 | Direct dependencies free of known advisories — no direct dependency carries a known advisory |
| 0/25 | Indirect dependencies free of known advisories — transitive set not separable from development and test dependencies in this scope |
| 0/40 | No advisories left outstanding — no advisory carries a publication date |
Inputs used
| source | osv |
| advisories | 75 |
| affected_packages | 13 |
| assessed_packages | 204 |
| unassessed_packages | 0 |
| affected_by_severity | critical 2, high 6, moderate 4, low 1 |
| direct_affected_packages | 0 |
Excluded from scoring (no data or not applicable): Indirect dependencies free of known advisories, No advisories left outstanding. Remaining weights renormalized. Matched 204 resolved dependencies against OSV. This repository publishes no package the index resolves, so the repository dependency graph was assessed instead. That graph mixes development and test pins with shipped dependencies, so only the declared runtime dependencies are scored; transitive findings are reported as context and excluded from the score. Reachability is not analyzed.
AI Readiness
How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score.
38
Agent context & guidance
7Critical
How it's scored
| 0/45 | Agent instructions — no CLAUDE.md / AGENTS.md / editor rules |
| 0/15 | Machine-readable docs (llms.txt) |
| 6.6/40 | Legible commit history — 12 of 97 human commits state their intent (structured subject or explanatory body) |
Inputs used
| has_llms_txt | no |
| legible_history_share | 0.124 |
| agent_instruction_files | — |
| agent_instruction_max_bytes | — |
Verify loop (build / test / typecheck)
53Moderate
How it's scored
| 0/18 | One-command bootstrap |
| 22/22 | Automated tests |
| 11/11 | Lint / format config |
| 0/11 | Static type checking |
| 10/10 | Reproducible environment — lockfile |
| 10/10 | Demonstrated agent practice — 10 of the last 100 commits agent-authored or agent-credited |
| 0/8 | Automated maintenance — no automated dependency updates observed |
| 0/10 | OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
Inputs used
| has_nix | no |
| has_tests | yes |
| lockfiles | uv.lock |
| has_dockerfile | no |
| typed_language | no |
| bootstrap_files | — |
| has_devcontainer | no |
| has_linter_config | yes |
| typecheck_configs | — |
| agent_commit_share | 0.1 |
| toolchain_manifests | — |
| dependency_bot_commit_share | 0 |
Code legibility for models
55Moderate
How it's scored
| 0/45 | Type-checkable code — Python without a type-check config |
| 55/55 | Manageable file sizes — 0/106 source files over 60KB |
Inputs used
| primary_language | Python |
| largest_source_bytes | 30,684 |
| source_files_sampled | 106 |
| oversized_source_files | 0 |
Machine-readable interfaces
40At risk
How it's scored
| 0/40 | API schema (OpenAPI/GraphQL/proto) |
| 0/20 | MCP server |
| 40/40 | Runnable examples — notebooks |
Inputs used
| example_dirs | notebooks |
| has_mcp_signal | no |
| api_schema_files | — |
Key facts
305GitHub stars
16contributors
181commits, last 12 months
5days since last push
24releases
1bus factor
27open issues
PyPIpackage ecosystems
Data collection warnings
- deps.dev does not index pypi:liana@1.8.1; advisories assessed against the repository dependency graph instead
More detail
Star and fork history 305 ★ / 34 ⇿
305Stars
34Forks
23Releases
When each star and fork was added, collected from GitHub and bucketed by day. Cumulative growth sits directly above the daily additions it is made of, so the two read against each other: steady organic accretion looks nothing like an abrupt, short-lived burst. Where that difference is measurable, it is reported as growth authenticity.
Major 0Minor 8Patch 12
Each point covers 4 days.
OpenSSF Scorecard 4.3 / 10
4.3aggregate
Independent, tool-agnostic security assessment from the open-source OpenSSF Scorecard. Each check rewards a security practice, not a specific vendor's tool. Checks Scorecard could not determine are marked n/a and excluded from the security score (never counted as zero).
| 10 | Binary-Artifacts | no binaries found in the repo |
| n/a | Branch-Protection | internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md |
| 10 | CI-Tests | 4 out of 4 merged PRs checked by a CI test -- score normalized to 10 |
| 0 | CII-Best-Practices | no effort to earn an OpenSSF best practices badge detected |
| 2 | Code-Review | Found 2/7 approved changesets -- score normalized to 2 |
| 10 | Contributors | project has 15 contributing companies or organizations |
| 10 | Dangerous-Workflow | no dangerous workflow patterns detected |
| 0 | Dependency-Update-Tool | no update tool detected |
| 0 | Fuzzing | project is not fuzzed |
| 10 | License | license file detected |
| 10 | Maintained | 30 commit(s) and 7 issue activity found in the last 90 days -- score normalized to 10 |
| 10 | Packaging | packaging workflow detected |
| 0 | Pinned-Dependencies | dependency not pinned by hash detected -- score normalized to 0 |
| 0 | SAST | SAST tool is not run on all commits -- score normalized to 0 |
| 0 | Security-Policy | security policy file not detected |
| n/a | Signed-Releases | no releases found |
| 0 | Token-Permissions | detected GitHub workflow tokens with excessive permissions |
| 0 | Vulnerabilities | 41 existing vulnerabilities detected |
Direct dependencies 9
| Registry | Package | Version constraint | Manifest |
|---|---|---|---|
| PyPI | anndata | >=0.7.4 | pyproject.toml |
| PyPI | mudata | — | pyproject.toml |
| PyPI | scanpy | — | pyproject.toml |
| PyPI | numba | — | pyproject.toml |
| PyPI | tqdm | >=4.0 | pyproject.toml |
| PyPI | docrep | >=0.3.1 | pyproject.toml |
| PyPI | plotnine | >=0.10.1 | pyproject.toml |
| PyPI | session-info2 | — | pyproject.toml |
| PyPI | pandas | <3 | pyproject.toml |
All dependencies 204
Full resolved dependency set from the GitHub dependency graph: 11 direct and 193 indirect (transitive) packages. The transitive closure is complete when the repository commits a lockfile.
| Registry | Package | Version | Relation |
|---|---|---|---|
| PyPI | anndata | 0.11.4 | direct |
| PyPI | anndata | 0.12.7 | direct |
| PyPI | docrep | 0.3.2 | direct |
| PyPI | mudata | 0.3.2 | direct |
| PyPI | numba | 0.63.1 | direct |
| PyPI | pandas | 2.3.3 | direct |
| PyPI | plotnine | 0.15.2 | direct |
| PyPI | scanpy | 1.11.5 | direct |
| PyPI | scanpy | 1.12 | direct |
| PyPI | session-info2 | 0.3 | direct |
| PyPI | tqdm | 4.67.1 | direct |
| PyPI | accessible-pygments | 0.0.5 | indirect |
| PyPI | adjusttext | 1.3.0 | indirect |
| PyPI | alabaster | 1.0.0 | indirect |
| PyPI | appnope | 0.1.4 | indirect |
| PyPI | array-api-compat | 1.13.0 | indirect |
| PyPI | asttokens | 3.0.1 | indirect |
| PyPI | attrs | 25.4.0 | indirect |
| PyPI | babel | 2.17.0 | indirect |
| PyPI | backports-tarfile | 1.2.0 | indirect |
| PyPI | beautifulsoup4 | 4.14.3 | indirect |
| PyPI | bump2version | 1.0.1 | indirect |
| PyPI | bumpversion | 0.6.0 | indirect |
| PyPI | cell2cell | 0.8.4 | indirect |
| PyPI | certifi | 2026.1.4 | indirect |
| PyPI | cffi | 2.0.0 | indirect |
| PyPI | cfgv | 3.5.0 | indirect |
| PyPI | charset-normalizer | 3.4.4 | indirect |
| PyPI | click | 8.3.1 | indirect |
| PyPI | colorama | 0.4.6 | indirect |
| PyPI | comm | 0.2.3 | indirect |
| PyPI | contourpy | 1.3.2 | indirect |
| PyPI | contourpy | 1.3.3 | indirect |
| PyPI | corneto | 0.9.1a6 | indirect |
| PyPI | coverage | 7.13.1 | indirect |
| PyPI | cryptography | 46.0.3 | indirect |
| PyPI | cvxpy-base | 1.7.5 | indirect |
| PyPI | cycler | 0.12.1 | indirect |
| PyPI | debugpy | 1.8.19 | indirect |
| PyPI | decorator | 5.2.1 | indirect |
| PyPI | decoupler | 2.1.4 | indirect |
| PyPI | distlib | 0.4.0 | indirect |
| PyPI | docutils | 0.21.2 | indirect |
| PyPI | donfig | 0.8.1.post1 | indirect |
| PyPI | et-xmlfile | 2.0.0 | indirect |
| PyPI | exceptiongroup | 1.3.1 | indirect |
| PyPI | executing | 2.2.1 | indirect |
| PyPI | fast-array-utils | 1.3.1 | indirect |
| PyPI | fastjsonschema | 2.21.2 | indirect |
| PyPI | filelock | 3.20.3 | indirect |
| PyPI | fonttools | 4.61.1 | indirect |
| PyPI | formulaic | 1.2.1 | indirect |
| PyPI | formulaic-contrasts | 1.0.0 | indirect |
| PyPI | google-crc32c | 1.8.0 | indirect |
| PyPI | greenlet | 3.3.1 | indirect |
| PyPI | gseapy | 1.1.11 | indirect |
| PyPI | h5py | 3.15.1 | indirect |
| PyPI | highspy | 1.12.0 | indirect |
| PyPI | id | 1.5.0 | indirect |
| PyPI | identify | 2.6.16 | indirect |
| PyPI | idna | 3.11 | indirect |
| PyPI | imagesize | 1.4.1 | indirect |
| PyPI | importlib-metadata | 8.7.1 | indirect |
| PyPI | inflect | 7.5.0 | indirect |
| PyPI | iniconfig | 2.3.0 | indirect |
| PyPI | interface-meta | 1.3.0 | indirect |
| PyPI | ipykernel | 7.1.0 | indirect |
| PyPI | ipython | 8.38.0 | indirect |
| PyPI | ipython | 9.9.0 | indirect |
| PyPI | ipython-pygments-lexers | 1.1.1 | indirect |
| PyPI | jaraco-classes | 3.4.0 | indirect |
| PyPI | jaraco-context | 6.1.0 | indirect |
| PyPI | jaraco-functools | 4.4.0 | indirect |
| PyPI | jedi | 0.19.2 | indirect |
| PyPI | jeepney | 0.9.0 | indirect |
| PyPI | jinja2 | 3.1.6 | indirect |
| PyPI | joblib | 1.5.3 | indirect |
| PyPI | jsonschema | 4.26.0 | indirect |
| PyPI | jsonschema-specifications | 2025.9.1 | indirect |
| PyPI | jupyter-cache | 1.0.1 | indirect |
| PyPI | jupyter-client | 8.8.0 | indirect |
| PyPI | jupyter-core | 5.9.1 | indirect |
| PyPI | keyring | 25.7.0 | indirect |
| PyPI | kiwisolver | 1.4.9 | indirect |
| PyPI | kneed | 0.8.5 | indirect |
| PyPI | latexcodec | 3.0.1 | indirect |
| PyPI | legacy-api-wrap | 1.5 | indirect |
| PyPI | legendkit | 0.3.6 | indirect |
| PyPI | liana | 1.7.1 | indirect |
| PyPI | llvmlite | 0.46.0 | indirect |
| PyPI | markdown-it-py | 3.0.0 | indirect |
| PyPI | markdown-it-py | 4.0.0 | indirect |
| PyPI | markupsafe | 3.0.3 | indirect |
| PyPI | marsilea | 0.5.7 | indirect |
| PyPI | matplotlib | 3.10.8 | indirect |
| PyPI | matplotlib-inline | 0.2.1 | indirect |
| PyPI | mdit-py-plugins | 0.5.0 | indirect |
| PyPI | mdurl | 0.1.2 | indirect |
| PyPI | mizani | 0.14.3 | indirect |
| PyPI | mofapy2 | 0.7.3 | indirect |
| PyPI | mofax | 0.3.7 | indirect |
| PyPI | more-itertools | 10.8.0 | indirect |
| PyPI | muon | 0.1.7 | indirect |
| PyPI | myst-nb | 1.3.0 | indirect |
| PyPI | myst-parser | 4.0.1 | indirect |
| PyPI | myst-parser | 5.0.0 | indirect |
| PyPI | narwhals | 2.15.0 | indirect |
| PyPI | natsort | 8.4.0 | indirect |
| PyPI | nbclient | 0.10.4 | indirect |
| PyPI | nbformat | 5.10.4 | indirect |
| PyPI | nest-asyncio | 1.6.0 | indirect |
| PyPI | networkx | 3.4.2 | indirect |
| PyPI | networkx | 3.6.1 | indirect |
| PyPI | nh3 | 0.3.2 | indirect |
| PyPI | nodeenv | 1.10.0 | indirect |
| PyPI | numcodecs | 0.16.5 | indirect |
| PyPI | numpy | 2.2.6 | indirect |
| PyPI | numpy | 2.3.5 | indirect |
| PyPI | omnipath | 1.0.12 | indirect |
| PyPI | openpyxl | 3.1.5 | indirect |
| PyPI | packaging | 26.0 | indirect |
| PyPI | parso | 0.8.5 | indirect |
| PyPI | patsy | 1.0.2 | indirect |
| PyPI | pexpect | 4.9.0 | indirect |
| PyPI | pillow | 12.1.0 | indirect |
| PyPI | platformdirs | 4.5.1 | indirect |
| PyPI | pluggy | 1.6.0 | indirect |
| PyPI | pre-commit | 4.5.1 | indirect |
| PyPI | prompt-toolkit | 3.0.52 | indirect |
| PyPI | protobuf | 6.33.4 | indirect |
| PyPI | psutil | 7.2.1 | indirect |
| PyPI | ptyprocess | 0.7.0 | indirect |
| PyPI | pure-eval | 0.2.3 | indirect |
| PyPI | pyarrow | 23.0.0 | indirect |
| PyPI | pybtex | 0.25.1 | indirect |
| PyPI | pybtex-docutils | 1.0.3 | indirect |
| PyPI | pycparser | 3.0 | indirect |
| PyPI | pydata-sphinx-theme | 0.15.4 | indirect |
| PyPI | pydeseq2 | 0.5.2 | indirect |
| PyPI | pydeseq2 | 0.5.4 | indirect |
| PyPI | pygments | 2.19.2 | indirect |
| PyPI | pynndescent | 0.6.0 | indirect |
| PyPI | pyparsing | 3.3.2 | indirect |
| PyPI | pyscipopt | 5.7.1 | indirect |
| PyPI | pytest | 9.0.2 | indirect |
| PyPI | python-dateutil | 2.9.0.post0 | indirect |
| PyPI | pytz | 2025.2 | indirect |
| PyPI | pywin32-ctypes | 0.2.3 | indirect |
| PyPI | pyyaml | 6.0.3 | indirect |
| PyPI | pyzmq | 27.1.0 | indirect |
| PyPI | readme-renderer | 44.0 | indirect |
| PyPI | referencing | 0.37.0 | indirect |
| PyPI | requests | 2.32.5 | indirect |
| PyPI | requests-toolbelt | 1.0.0 | indirect |
| PyPI | rfc3986 | 2.0.0 | indirect |
| PyPI | rich | 14.2.0 | indirect |
| PyPI | rpds-py | 0.30.0 | indirect |
| PyPI | scikit-learn | 1.7.2 | indirect |
| PyPI | scikit-learn | 1.8.0 | indirect |
| PyPI | scipy | 1.15.3 | indirect |
| PyPI | scipy | 1.17.0 | indirect |
| PyPI | seaborn | 0.13.2 | indirect |
| PyPI | secretstorage | 3.5.0 | indirect |
| PyPI | session-info | 1.0.1 | indirect |
| PyPI | setuptools | 80.10.1 | indirect |
| PyPI | six | 1.17.0 | indirect |
| PyPI | snowballstemmer | 3.0.1 | indirect |
| PyPI | soupsieve | 2.8.3 | indirect |
| PyPI | sphinx | 8.1.3 | indirect |
| PyPI | sphinx-autodoc-typehints | 3.0.1 | indirect |
| PyPI | sphinx-book-theme | 1.1.4 | indirect |
| PyPI | sphinx-copybutton | 0.5.2 | indirect |
| PyPI | sphinx-tabs | 3.4.7 | indirect |
| PyPI | sphinxcontrib-applehelp | 2.0.0 | indirect |
| PyPI | sphinxcontrib-bibtex | 2.6.5 | indirect |
| PyPI | sphinxcontrib-devhelp | 2.0.0 | indirect |
| PyPI | sphinxcontrib-htmlhelp | 2.1.0 | indirect |
| PyPI | sphinxcontrib-jsmath | 1.0.1 | indirect |
| PyPI | sphinxcontrib-qthelp | 2.0.0 | indirect |
| PyPI | sphinxcontrib-serializinghtml | 2.0.0 | indirect |
| PyPI | sphinxext-opengraph | 0.13.0 | indirect |
| PyPI | sqlalchemy | 2.0.46 | indirect |
| PyPI | stack-data | 0.6.3 | indirect |
| PyPI | statannotations | 0.7.2 | indirect |
| PyPI | statsmodels | 0.14.6 | indirect |
| PyPI | stdlib-list | 0.12.0 | indirect |
| PyPI | tabulate | 0.9.0 | indirect |
| PyPI | tensorly | 0.9.0 | indirect |
| PyPI | threadpoolctl | 3.6.0 | indirect |
| PyPI | tomli | 2.4.0 | indirect |
| PyPI | tornado | 6.5.4 | indirect |
| PyPI | traitlets | 5.14.3 | indirect |
| PyPI | twine | 6.2.0 | indirect |
| PyPI | typeguard | 4.4.4 | indirect |
| PyPI | typing-extensions | 4.15.0 | indirect |
| PyPI | tzdata | 2025.3 | indirect |
| PyPI | umap-learn | 0.5.11 | indirect |
| PyPI | urllib3 | 2.6.3 | indirect |
| PyPI | virtualenv | 20.36.1 | indirect |
| PyPI | wcwidth | 0.3.2 | indirect |
| PyPI | wrapt | 2.0.1 | indirect |
| PyPI | xlrd | 2.0.2 | indirect |
| PyPI | zarr | 3.1.5 | indirect |
| PyPI | zipp | 3.23.0 | indirect |
Dependency advisories 13
This repository publishes no package the index resolves, so its own dependency graph was assessed — 204 packages, which also include development and test pins that never ship: 13 carry known advisories, of which 0 are direct.
| Package | Version | Relation | Severity | Advisories | Fixed in |
|---|---|---|---|---|---|
| cryptography | 46.0.3 | indirect | critical | 7 | 48.0.1 |
| pillow | 12.1.0 | indirect | critical | 33 | 12.3.0 |
| click | 8.3.1 | indirect | high | 1 | 8.3.3 |
| protobuf | 6.33.4 | indirect | high | 2 | 6.33.5 |
| pyarrow | 23.0.0 | indirect | high | 2 | 23.0.1 |
| soupsieve | 2.8.3 | indirect | high | 4 | 2.8.4 |
| tornado | 6.5.4 | indirect | high | 12 | 6.5.7 |
| urllib3 | 2.6.3 | indirect | high | 4 | 2.7.0 |
| idna | 3.11 | indirect | moderate | 2 | 3.15 |
| pytest | 9.0.2 | indirect | moderate | 2 | 9.0.3 |
| requests | 2.32.5 | indirect | moderate | 2 | 2.33.0 |
| setuptools | 80.10.1 | indirect | moderate | 2 | 83.0.0 |
| pygments | 2.19.2 | indirect | low | 2 | 2.20.0 |
An advisory means the version recorded in the dependency graph falls inside an advisory’s affected range. Reachability is not analysed, and the graph includes development and test pins — a finding may concern tooling rather than shipped software.
Raw JSON report machine-readable
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{
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{
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{
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"weight": 0.18,
"metrics": [
{
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}
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{
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{
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{
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{
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{
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{
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],
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{
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"metrics": [
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"key": "maintainer_resilience",
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"note": null,
"notes": [],
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{
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{
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{
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]
},
{
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"components": [
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}
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{
"key": "pr_acceptance",
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{
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]
},
{
"key": "stewardship",
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"notes": [],
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"is_verified": null,
"owner_login": "saezlab",
"public_repos": 306,
"account_age_days": 4254
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"components": [
{
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"code": "owner_organization",
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],
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{
"key": "verified_domain",
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"points": 0,
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{
"key": "owner_reach",
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{
"code": "owner_followers",
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}
],
"max_points": 25
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{
"key": "track_record",
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"points": 25,
"status": "met",
"details": [
{
"code": "public_repos",
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},
{
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}
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]
},
{
"key": "package_maintenance",
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"note": null,
"notes": [],
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"inputs": {
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"ecosystems": "pypi",
"any_deprecated": false,
"min_days_since_publish": 5
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"components": [
{
"key": "published_resolvable",
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"detail": "1 package(s) on pypi",
"points": 25,
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}
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{
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"points": 35,
"status": "met",
"details": [
{
"code": "publish_recency",
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"days": 5
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}
],
"max_points": 35
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{
"key": "version_history",
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"points": 20,
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"details": [
{
"code": "published_versions",
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"count": 29
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}
],
"max_points": 20
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{
"key": "not_deprecated",
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],
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]
}
],
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},
{
"key": "engineering",
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"weight": 0.2,
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{
"key": "engineering_practices",
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{
"key": "tests_present",
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"points": 24,
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{
"key": "linter_config",
"name": "Linter config",
"detail": null,
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{
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{
"key": "editorconfig",
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{
"key": "openssf_scorecard_ci_tests",
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]
},
{
"key": "documentation",
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"value": 100,
"inputs": {
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"components": [
{
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{
"key": "documentation_directory",
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{
"key": "documentation_homepage_site",
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{
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"points": 10,
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{
"key": "topics",
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],
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{
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]
}
],
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{
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"weight": 0.16,
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{
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{
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{
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{
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"points": 2.5,
"status": "met",
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{
"key": "dangerous_workflow",
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"detail": "no dangerous workflow patterns detected",
"points": 10,
"status": "met",
"details": [],
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},
{
"key": "dependency_update_tool",
"name": "Dependency-Update-Tool",
"detail": "no update tool detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
},
{
"key": "fuzzing",
"name": "Fuzzing",
"detail": "project is not fuzzed",
"points": 0,
"status": "missed",
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{
"key": "license",
"name": "License",
"detail": "license file detected",
"points": 2.5,
"status": "met",
"details": [],
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},
{
"key": "maintained",
"name": "Maintained",
"detail": "30 commit(s) and 7 issue activity found in the last 90 days -- score normalized to 10",
"points": 7.5,
"status": "met",
"details": [],
"max_points": 7.5
},
{
"key": "packaging",
"name": "Packaging",
"detail": "packaging workflow detected",
"points": 5,
"status": "met",
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},
{
"key": "pinned_dependencies",
"name": "Pinned-Dependencies",
"detail": "dependency not pinned by hash detected -- score normalized to 0",
"points": 0,
"status": "missed",
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{
"key": "sast",
"name": "SAST",
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"points": 0,
"status": "missed",
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{
"key": "security_policy",
"name": "Security-Policy",
"detail": "security policy file not detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "signed_releases",
"name": "Signed-Releases",
"detail": "no releases found",
"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
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],
"max_points": 7.5
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{
"key": "token_permissions",
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"detail": "detected GitHub workflow tokens with excessive permissions",
"points": 0,
"status": "missed",
"details": [],
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{
"key": "vulnerabilities",
"name": "Vulnerabilities",
"detail": "41 existing vulnerabilities detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
}
]
},
{
"key": "dependency_advisories",
"band": "excellent",
"name": "Dependency advisories",
"note": "Excluded from scoring (no data or not applicable): Indirect dependencies free of known advisories, No advisories left outstanding. Remaining weights renormalized. Matched 204 resolved dependencies against OSV. This repository publishes no package the index resolves, so the repository dependency graph was assessed instead. That graph mixes development and test pins with shipped dependencies, so only the declared runtime dependencies are scored; transitive findings are reported as context and excluded from the score. Reachability is not analyzed.",
"notes": [
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},
{
"code": "weights_renormalized",
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{
"code": "advisories_scope_repository",
"params": {
"assessed": 204
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},
{
"code": "advisories_repo_graph_caveat",
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{
"code": "advisories_reachability",
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],
"value": 100,
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"affected_by_severity": "critical 2, high 6, moderate 4, low 1",
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"components": [
{
"key": "direct_dependencies_free_of_known_advisories",
"name": "Direct dependencies free of known advisories",
"detail": "no direct dependency carries a known advisory",
"points": 35,
"status": "met",
"details": [
{
"code": "no_direct_advisories",
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}
],
"max_points": 35
},
{
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{
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}
],
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},
{
"key": "no_advisories_left_outstanding",
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"points": 0,
"status": "excluded",
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{
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}
],
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}
]
},
{
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"note": null,
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"inputs": {
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"meaning": "reported as a malicious package by the OpenSSF corpus; the remedy is removal or moving off the compromised name, never an upgrade of the same artifact. Versions the registry has since pulled are listed but not scored",
"packages": [],
"red_flag": false,
"assessed_packages": 204,
"malicious_packages": 0,
"direct_malicious_packages": 0,
"withdrawn_malicious_packages": 0,
"installable_malicious_packages": 0
},
"components": [
{
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"detail": "no dependency is reported as a malicious package",
"points": 100,
"status": "met",
"details": [
{
"code": "no_malicious_dependencies",
"params": {}
}
],
"max_points": 100
}
]
},
{
"key": "high_risk_jurisdiction_exposure",
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"name": "High-Risk Jurisdiction Exposure",
"note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
"notes": [
{
"code": "jurisdiction_evidence_limits",
"params": {}
}
],
"value": 100,
"inputs": {
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"red_flag": false,
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"Iran",
"North Korea"
],
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"assessed_self_published_locations": 19
},
"components": [
{
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"details": [
{
"code": "jurisdiction_no_match",
"params": {}
}
],
"max_points": 100
}
]
}
],
"description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
},
{
"key": "ai_readiness",
"band": "at_risk",
"name": "AI Readiness",
"value": 38,
"weight": 0,
"metrics": [
{
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"name": "Agent context & guidance",
"note": null,
"notes": [],
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"inputs": {
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},
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{
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"points": 0,
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{
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}
],
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},
{
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"points": 0,
"status": "missed",
"details": [],
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},
{
"key": "legible_commit_history",
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}
],
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]
},
{
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"note": null,
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"inputs": {
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"has_tests": true,
"lockfiles": [
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},
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{
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"points": 0,
"status": "missed",
"details": [],
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},
{
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"points": 22,
"status": "met",
"details": [],
"max_points": 22
},
{
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"points": 11,
"status": "met",
"details": [],
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},
{
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"detail": null,
"points": 0,
"status": "missed",
"details": [],
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},
{
"key": "reproducible_environment",
"name": "Reproducible environment",
"detail": "lockfile",
"points": 10,
"status": "met",
"details": [
{
"code": "file_list",
"params": {
"files": "lockfile"
}
}
],
"max_points": 10
},
{
"key": "demonstrated_agent_practice",
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"detail": "10 of the last 100 commits agent-authored or agent-credited",
"points": 10,
"status": "met",
"details": [
{
"code": "agent_authored_commits",
"params": {
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"sampled": 100
}
}
],
"max_points": 10
},
{
"key": "automated_maintenance",
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"points": 0,
"status": "missed",
"details": [
{
"code": "no_dependency_automation",
"params": {}
}
],
"max_points": 8
},
{
"key": "openssf_scorecard_pinned_dependencies",
"name": "OpenSSF Scorecard: Pinned-Dependencies",
"detail": "dependency not pinned by hash detected -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 10
}
]
},
{
"key": "ai_code_legibility",
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"name": "Code legibility for models",
"note": null,
"notes": [],
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"source_files_sampled": 106,
"oversized_source_files": 0
},
"components": [
{
"key": "type_checkable_code",
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"points": 0,
"status": "missed",
"details": [
{
"code": "no_typecheck_config_language",
"params": {
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}
}
],
"max_points": 45
},
{
"key": "manageable_file_sizes",
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"detail": "0/106 source files over 60KB",
"points": 55,
"status": "met",
"details": [
{
"code": "oversized_source_files",
"params": {
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"sampled": 106,
"oversized": 0
}
}
],
"max_points": 55
}
]
},
{
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"name": "Machine-readable interfaces",
"note": null,
"notes": [],
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],
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"api_schema_files": []
},
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{
"key": "api_schema_openapi_graphql_proto",
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"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 40
},
{
"key": "mcp_server",
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"points": 0,
"status": "missed",
"details": [],
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},
{
"key": "runnable_examples",
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"points": 40,
"status": "met",
"details": [
{
"code": "file_list",
"params": {
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}
}
],
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}
]
}
],
"description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
}
],
"metrics_version": "1.13.0"
},
"warnings": [
"deps.dev does not index pypi:liana@1.8.1; advisories assessed against the repository dependency graph instead"
],
"report_type": "repository",
"generated_at": "2026-07-21T21:22:29.975173Z",
"schema_version": "0.23.0",
"badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/s/saezlab/liana-py.svg",
"full_name": "saezlab/liana-py",
"license_state": "standard",
"license_spdx": "BSD-3-Clause"
}Scores are signals, not warranties. They reflect publicly visible practices on GitHub — not a code audit, and not a security guarantee.
Missing data is excluded and weights renormalized, never scored as zero. Methodology is versioned and open: metrics v1.13.0, schema v0.23.0 — full methodology · metrics wiki.
How one result sits in the wider record: aggregate statistics — PyPI.