Registro público
Informe de salud del softwareesquema 0.23.0 · métricas 1.13.0 · 2026-07-21 21:22 UTC

saezlab / liana-py

LIANA+: an all-in-one framework for cell-cell communication

PythonBSD-3-Clause★ 305 estrellas⑂ 34 forksdesde sept 2022Ver en GitHub ↗

saezlab/liana-py tiene un índice de salud de 74 sobre 100, lo que lo sitúa en la banda Bueno. Su puntuación más alta es Engineering Quality (96/100) y la más baja, AI Readiness (38/100). Se actualizó por última vez hace 5 días. Una sola persona concentra la mayor parte del trabajo reciente.

74
global / 100
Bueno

Índice de salud del software

Las métricas se agrupan en categorías ponderadas sobre una escala de 1 a 100. El resultado global parte de su media; cuando la evidencia pública activa la Política de Jurisdicciones de Alto Riesgo, la calificación se ajusta y recibe el límite 49 (En riesgo). Preparación para IA queda fuera.

74
Excelente85-100Ejemplar; cumple prácticamente todos los criterios evaluados
Bueno70-84Saludable; carencias menores
Moderado50-69Aceptable con carencias notables; se recomienda revisión
En riesgo30-49Debilidades significativas; su adopción exige cautela
Crítico1-29Problemas graves (proyecto abandonado, un solo mantenedor, sin higiene)
VitalidadComunidad yAdopciónSostenibilidady GobernanzaCalidad deIngenieríaSeguridadPreparaciónpara IA

Perfil de puntuación

Cada eje es una categoría. La forma importa más que la media: un proyecto sano llena toda la figura, mientras que un perfil de picos y cráteres indica que la fortaleza en una dimensión enmascara el riesgo en otra.

Titularidad

Saez LabOrganización
487 seguidores306 repositorios públicosdesde nov 2014

Este repositorio está respaldado por una organización: una custodia compartida y responsable que puede sobrevivir a cualquier mantenedor individual.

Ecosistemas de paquetes

RegistroPaqueteVersiónDescargas / mesVersionesÚltima publicación
PyPIliana1.8.1-29hace 5 días

Métricas por categoría

Vitalidad

¿Está vivo el proyecto: se escribe código y se publican versiones?

84Bueno · 22% del índice global
Cómo se puntúa
36/36Recencia de push — último push hace 5 días
15.2/36Cadencia de commits — 22/52 semanas con commits
18/18Volumen de commits — 181 commits en el último año
10/10OpenSSF Scorecard: Maintained — 30 commit(s) and 7 issue activity found in the last 90 days -- score normalized to 10
Datos de entrada utilizados
commits_last_year181
human_commit_share0,97
days_since_last_push5
active_weeks_last_year22
Cómo se puntúa
27/27Publica versiones — 24 versiones publicadas
36/36Recencia de las versiones — última versión hace 5 días
19.8/27Cadencia de publicación — una versión cada ~60,5 días
0/10OpenSSF Scorecard: Signed-Releases — sin datos
Datos de entrada utilizados
releases_count24
latest_release_tagv1.8.1
releases_from_tagsno
days_since_latest_release5
mean_days_between_releases60,5
Excluidos de la puntuación (sin datos o no aplicable): OpenSSF Scorecard: Signed-Releases. Los pesos restantes se han renormalizado.

Comunidad y Adopción

¿Tiene el proyecto usuarios, descargas, atención y unas condiciones acogedoras para quienes contribuyen?

61Moderado · 18% del índice global
Cómo se puntúa
40.3/60Estrellas — 305 estrellas
12.7/25Forks — 34 forks
0/15Observadores — 1 observadores
Datos de entrada utilizados
forks34
stars305
watchers1
growth_stateorganic
growth_factor_pct100
Cómo se puntúa
22.5/22.5README
22.5/22.5Licencia — licencia reconocida (BSD-3-Clause)
18/18Guía CONTRIBUTING
0/13.5Código de conducta
0/7.2Plantilla de issues
0/6.3Plantilla de PR
Datos de entrada utilizados
has_readme
has_license
has_contributing
has_issue_templateno
has_code_of_conductno
has_pull_request_templateno

Sostenibilidad y Gobernanza

¿Sobrevivirá el proyecto a sus personas: factor bus, capacidad de respuesta, quién lo respalda y mantenimiento del paquete?

68Moderado · 24% del índice global
Cómo se puntúa
9/54Factor bus — la mitad de los commits recae en 1 contribuyente(s)
8.8/22.5Distribución de commits — el principal contribuyente firma el 61% de los commits
13.5/13.5Amplitud de contribuyentes — 16 contribuyentes
10/10OpenSSF Scorecard: Contributors — project has 15 contributing companies or organizations
Datos de entrada utilizados
bus_factor1
contributors_sampled16
top_contributor_share0,608
Cómo se puntúa
39.7/46.8Resolución de issues — 85% de issues cerradas
27.5/38.3Aceptación de PR — 46/64 PR decididos fusionados
3/15OpenSSF Scorecard: Code-Review — Found 2/7 approved changesets -- score normalized to 2
Datos de entrada utilizados
merged_prs46
open_issues27
closed_issues153
issue_closed_ratio0,85
closed_unmerged_prs18
Cómo se puntúa
30/30Respaldo de la propiedad — propiedad de una organización
0/20Dominio verificado
19.3/25Alcance del propietario — 487 seguidores de saezlab
25/25Trayectoria — 306 repos públicos, cuenta de ~11 años
Datos de entrada utilizados
followers487
owner_typeOrganization
is_verified
owner_loginsaezlab
public_repos306
account_age_days4254
Cómo se puntúa
25/25Publicado y resoluble — 1 paquete(s) en pypi
35/35Recencia de publicación — última publicación hace 5 días
20/20Historial de versiones — 29 versiones en el registro
20/20No obsoleto — activo, ni obsoleto ni retirado
Datos de entrada utilizados
packagesliana
ecosystemspypi
any_deprecatedno
min_days_since_publish5

Calidad de Ingeniería

¿Existen unas prácticas mínimas de ingeniería y documentación?

96Excelente · 20% del índice global
Cómo se puntúa
24/24Flujos de trabajo de CI — 3 flujo(s) de trabajo
24/24Pruebas presentes
16/16Configuración de linter
9.6/9.6Hooks de pre-commit
0/6.4.editorconfig
20/20OpenSSF Scorecard: CI-Tests — 4 out of 4 merged PRs checked by a CI test -- score normalized to 10
Datos de entrada utilizados
has_ci
has_tests
has_editorconfigno
has_linter_config
has_precommit_config

Documentación

100Excelente
Cómo se puntúa
30/30README
25/25Directorio de documentación
15/15Sitio de documentación / página del proyecto — http://liana-py.readthedocs.io/
10/10Descripción del repositorio
10/10Topics — 7 topics
10/10Wiki
Datos de entrada utilizados
topicscell-cell-communication, ligand-receptor, python, single-cell, single-cell-rna-seq, spatial, spatialomics
has_wiki
homepagehttp://liana-py.readthedocs.io/
has_readme
has_docs_dir
has_description

Seguridad

¿Son sólidas las prácticas visibles de seguridad y de cadena de suministro, sin exposición jurisdiccional de alto riesgo sin resolver?

54Moderado · 16% del índice global
Cómo se puntúa
7.5/7.5Binary-Artifacts — no binaries found in the repo
0/7.5Branch-Protection — sin datos
2.5/2.5CI-Tests — 4 out of 4 merged PRs checked by a CI test -- score normalized to 10
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
1.5/7.5Code-Review — Found 2/7 approved changesets -- score normalized to 2
2.5/2.5Contributors — project has 15 contributing companies or organizations
10/10Dangerous-Workflow — no dangerous workflow patterns detected
0/7.5Dependency-Update-Tool — no update tool detected
0/5Fuzzing — project is not fuzzed
2.5/2.5Licencia — license file detected
7.5/7.5Maintained — 30 commit(s) and 7 issue activity found in the last 90 days -- score normalized to 10
5/5Packaging — packaging workflow detected
0/5Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
0/5SAST — SAST tool is not run on all commits -- score normalized to 0
0/5Security-Policy — security policy file not detected
0/7.5Signed-Releases — sin datos
0/7.5Token-Permissions — detected GitHub workflow tokens with excessive permissions
0/7.5Vulnerabilities — 41 existing vulnerabilities detected
Datos de entrada utilizados
sourceopenssf_scorecard
checks_evaluated16
scorecard_versionv5.5.0
checks_inconclusive2
scorecard_aggregate4,3
Excluidos de la puntuación (sin datos o no aplicable): branch_protection, signed_releases. Los pesos restantes se han renormalizado.
Cómo se puntúa
35/35Dependencias directas libres de avisos conocidos — ninguna dependencia directa tiene un aviso conocido
0/25Dependencias indirectas libres de avisos conocidos — el conjunto transitivo no es separable de las dependencias de desarrollo y prueba en este alcance
0/40Sin avisos pendientes — ningún aviso tiene fecha de publicación
Datos de entrada utilizados
sourceosv
advisories75
affected_packages13
assessed_packages204
unassessed_packages0
affected_by_severitycritical 2, high 6, moderate 4, low 1
direct_affected_packages0
Excluidos de la puntuación (sin datos o no aplicable): Dependencias indirectas libres de avisos conocidos, Sin avisos pendientes. Los pesos restantes se han renormalizado. Se cotejaron 204 dependencias resueltas con OSV. Este repositorio no publica ningún paquete que el índice resuelva, por lo que se evaluó en su lugar el grafo de dependencias del repositorio. Ese grafo mezcla fijaciones de desarrollo y prueba con las dependencias distribuidas, de modo que solo se puntúan las dependencias declaradas en tiempo de ejecución; los hallazgos transitivos se informan como contexto y quedan excluidos de la puntuación. No se analiza la alcanzabilidad.

Preparación para IA

¿Hasta qué punto está el repositorio preparado para desarrollarse y mantenerse con agentes de codificación de IA? Es una insignia independiente y experimental — peso 0,0, de modo que se presenta por separado y no afecta a la puntuación de salud global.

38En riesgo · 0% del índice global
Cómo se puntúa
0/45Instrucciones para agentes — sin CLAUDE.md / AGENTS.md / reglas de editor
0/15Documentación legible por máquinas (llms.txt)
6.6/40Historial de commits legible — 12 de 97 commits humanos declaran su intención (asunto estructurado o cuerpo explicativo)
Datos de entrada utilizados
has_llms_txtno
legible_history_share0,124
agent_instruction_files
agent_instruction_max_bytes
Cómo se puntúa
0/18Arranque con un solo comando
22/22Pruebas automatizadas
11/11Configuración de lint / formato
0/11Verificación estática de tipos
10/10Entorno reproducible — lockfile
10/10Práctica demostrada con agentes — 10 de los últimos 100 commits con autoría o crédito de agente
0/8Mantenimiento automatizado — no se observan actualizaciones automáticas de dependencias
0/10OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
Datos de entrada utilizados
has_nixno
has_tests
lockfilesuv.lock
has_dockerfileno
typed_languageno
bootstrap_files
has_devcontainerno
has_linter_config
typecheck_configs
agent_commit_share0,1
toolchain_manifests
dependency_bot_commit_share0
Cómo se puntúa
0/45Código verificable por tipos — Python sin configuración de verificación de tipos
55/55Tamaños de archivo manejables — 0/106 archivos fuente de más de 60 KB
Datos de entrada utilizados
primary_languagePython
largest_source_bytes30.684
source_files_sampled106
oversized_source_files0
Cómo se puntúa
0/40Esquema de API (OpenAPI/GraphQL/proto)
0/20Servidor MCP
40/40Ejemplos ejecutables — notebooks
Datos de entrada utilizados
example_dirsnotebooks
has_mcp_signalno
api_schema_files

Datos clave

305estrellas de GitHub
16contribuidores
181commits en los últimos 12 meses
5días desde el último push
24versiones publicadas
1factor bus
27issues abiertas
PyPIecosistemas de paquetes

Advertencias de recopilación de datos

  • deps.dev does not index pypi:liana@1.8.1; advisories assessed against the repository dependency graph instead

Más detalle

Historial de estrellas y forks 305 ★ / 34 ⇿
305Estrellas
34Forks
23Versiones

Cuándo se añadió cada estrella y fork, recopilado de GitHub y agrupado por día. El crecimiento acumulado se sitúa justo encima de las adiciones diarias que lo componen, de modo que ambos se leen en conjunto: la acumulación orgánica sostenida no se parece en nada a un pico abrupto y efímero. Cuando esa diferencia es medible, se informa como autenticidad del crecimiento.

012525037530534102022-102024-082026-07
Mayor 0Menor 8Parche 12

Cada punto abarca 4 días.

OpenSSF Scorecard 4.3 / 10
4.3agregado

Evaluación de seguridad independiente y agnóstica en cuanto a herramientas, procedente del proyecto de código abierto OpenSSF Scorecard. Cada comprobación premia una práctica de seguridad, no la herramienta de un proveedor concreto. Las comprobaciones que Scorecard no pudo determinar se marcan como n/d y se excluyen de la puntuación de seguridad (nunca se cuentan como cero).Scorecard v5.5.0 · 2026-07-21 21:22 UTC

10Binary-Artifactsno binaries found in the repo
n/dBranch-Protectioninternal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md
10CI-Tests4 out of 4 merged PRs checked by a CI test -- score normalized to 10
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
2Code-ReviewFound 2/7 approved changesets -- score normalized to 2
10Contributorsproject has 15 contributing companies or organizations
10Dangerous-Workflowno dangerous workflow patterns detected
0Dependency-Update-Toolno update tool detected
0Fuzzingproject is not fuzzed
10Licenselicense file detected
10Maintained30 commit(s) and 7 issue activity found in the last 90 days -- score normalized to 10
10Packagingpackaging workflow detected
0Pinned-Dependenciesdependency not pinned by hash detected -- score normalized to 0
0SASTSAST tool is not run on all commits -- score normalized to 0
0Security-Policysecurity policy file not detected
n/dSigned-Releasesno releases found
0Token-Permissionsdetected GitHub workflow tokens with excessive permissions
0Vulnerabilities41 existing vulnerabilities detected
Dependencias directas 9
RegistroPaqueteRestricción de versiónManifiesto
PyPIanndata>=0.7.4pyproject.toml
PyPImudatapyproject.toml
PyPIscanpypyproject.toml
PyPInumbapyproject.toml
PyPItqdm>=4.0pyproject.toml
PyPIdocrep>=0.3.1pyproject.toml
PyPIplotnine>=0.10.1pyproject.toml
PyPIsession-info2pyproject.toml
PyPIpandas<3pyproject.toml
Todas las dependencias 204

Conjunto completo de dependencias resueltas según el grafo de dependencias de GitHub: 11 paquetes directos y 193 indirectos (transitivos). El cierre transitivo es completo cuando el repositorio incluye un lockfile.

RegistroPaqueteVersiónRelación
PyPIanndata0.11.4directa
PyPIanndata0.12.7directa
PyPIdocrep0.3.2directa
PyPImudata0.3.2directa
PyPInumba0.63.1directa
PyPIpandas2.3.3directa
PyPIplotnine0.15.2directa
PyPIscanpy1.11.5directa
PyPIscanpy1.12directa
PyPIsession-info20.3directa
PyPItqdm4.67.1directa
PyPIaccessible-pygments0.0.5indirecta
PyPIadjusttext1.3.0indirecta
PyPIalabaster1.0.0indirecta
PyPIappnope0.1.4indirecta
PyPIarray-api-compat1.13.0indirecta
PyPIasttokens3.0.1indirecta
PyPIattrs25.4.0indirecta
PyPIbabel2.17.0indirecta
PyPIbackports-tarfile1.2.0indirecta
PyPIbeautifulsoup44.14.3indirecta
PyPIbump2version1.0.1indirecta
PyPIbumpversion0.6.0indirecta
PyPIcell2cell0.8.4indirecta
PyPIcertifi2026.1.4indirecta
PyPIcffi2.0.0indirecta
PyPIcfgv3.5.0indirecta
PyPIcharset-normalizer3.4.4indirecta
PyPIclick8.3.1indirecta
PyPIcolorama0.4.6indirecta
PyPIcomm0.2.3indirecta
PyPIcontourpy1.3.2indirecta
PyPIcontourpy1.3.3indirecta
PyPIcorneto0.9.1a6indirecta
PyPIcoverage7.13.1indirecta
PyPIcryptography46.0.3indirecta
PyPIcvxpy-base1.7.5indirecta
PyPIcycler0.12.1indirecta
PyPIdebugpy1.8.19indirecta
PyPIdecorator5.2.1indirecta
PyPIdecoupler2.1.4indirecta
PyPIdistlib0.4.0indirecta
PyPIdocutils0.21.2indirecta
PyPIdonfig0.8.1.post1indirecta
PyPIet-xmlfile2.0.0indirecta
PyPIexceptiongroup1.3.1indirecta
PyPIexecuting2.2.1indirecta
PyPIfast-array-utils1.3.1indirecta
PyPIfastjsonschema2.21.2indirecta
PyPIfilelock3.20.3indirecta
PyPIfonttools4.61.1indirecta
PyPIformulaic1.2.1indirecta
PyPIformulaic-contrasts1.0.0indirecta
PyPIgoogle-crc32c1.8.0indirecta
PyPIgreenlet3.3.1indirecta
PyPIgseapy1.1.11indirecta
PyPIh5py3.15.1indirecta
PyPIhighspy1.12.0indirecta
PyPIid1.5.0indirecta
PyPIidentify2.6.16indirecta
PyPIidna3.11indirecta
PyPIimagesize1.4.1indirecta
PyPIimportlib-metadata8.7.1indirecta
PyPIinflect7.5.0indirecta
PyPIiniconfig2.3.0indirecta
PyPIinterface-meta1.3.0indirecta
PyPIipykernel7.1.0indirecta
PyPIipython8.38.0indirecta
PyPIipython9.9.0indirecta
PyPIipython-pygments-lexers1.1.1indirecta
PyPIjaraco-classes3.4.0indirecta
PyPIjaraco-context6.1.0indirecta
PyPIjaraco-functools4.4.0indirecta
PyPIjedi0.19.2indirecta
PyPIjeepney0.9.0indirecta
PyPIjinja23.1.6indirecta
PyPIjoblib1.5.3indirecta
PyPIjsonschema4.26.0indirecta
PyPIjsonschema-specifications2025.9.1indirecta
PyPIjupyter-cache1.0.1indirecta
PyPIjupyter-client8.8.0indirecta
PyPIjupyter-core5.9.1indirecta
PyPIkeyring25.7.0indirecta
PyPIkiwisolver1.4.9indirecta
PyPIkneed0.8.5indirecta
PyPIlatexcodec3.0.1indirecta
PyPIlegacy-api-wrap1.5indirecta
PyPIlegendkit0.3.6indirecta
PyPIliana1.7.1indirecta
PyPIllvmlite0.46.0indirecta
PyPImarkdown-it-py3.0.0indirecta
PyPImarkdown-it-py4.0.0indirecta
PyPImarkupsafe3.0.3indirecta
PyPImarsilea0.5.7indirecta
PyPImatplotlib3.10.8indirecta
PyPImatplotlib-inline0.2.1indirecta
PyPImdit-py-plugins0.5.0indirecta
PyPImdurl0.1.2indirecta
PyPImizani0.14.3indirecta
PyPImofapy20.7.3indirecta
PyPImofax0.3.7indirecta
PyPImore-itertools10.8.0indirecta
PyPImuon0.1.7indirecta
PyPImyst-nb1.3.0indirecta
PyPImyst-parser4.0.1indirecta
PyPImyst-parser5.0.0indirecta
PyPInarwhals2.15.0indirecta
PyPInatsort8.4.0indirecta
PyPInbclient0.10.4indirecta
PyPInbformat5.10.4indirecta
PyPInest-asyncio1.6.0indirecta
PyPInetworkx3.4.2indirecta
PyPInetworkx3.6.1indirecta
PyPInh30.3.2indirecta
PyPInodeenv1.10.0indirecta
PyPInumcodecs0.16.5indirecta
PyPInumpy2.2.6indirecta
PyPInumpy2.3.5indirecta
PyPIomnipath1.0.12indirecta
PyPIopenpyxl3.1.5indirecta
PyPIpackaging26.0indirecta
PyPIparso0.8.5indirecta
PyPIpatsy1.0.2indirecta
PyPIpexpect4.9.0indirecta
PyPIpillow12.1.0indirecta
PyPIplatformdirs4.5.1indirecta
PyPIpluggy1.6.0indirecta
PyPIpre-commit4.5.1indirecta
PyPIprompt-toolkit3.0.52indirecta
PyPIprotobuf6.33.4indirecta
PyPIpsutil7.2.1indirecta
PyPIptyprocess0.7.0indirecta
PyPIpure-eval0.2.3indirecta
PyPIpyarrow23.0.0indirecta
PyPIpybtex0.25.1indirecta
PyPIpybtex-docutils1.0.3indirecta
PyPIpycparser3.0indirecta
PyPIpydata-sphinx-theme0.15.4indirecta
PyPIpydeseq20.5.2indirecta
PyPIpydeseq20.5.4indirecta
PyPIpygments2.19.2indirecta
PyPIpynndescent0.6.0indirecta
PyPIpyparsing3.3.2indirecta
PyPIpyscipopt5.7.1indirecta
PyPIpytest9.0.2indirecta
PyPIpython-dateutil2.9.0.post0indirecta
PyPIpytz2025.2indirecta
PyPIpywin32-ctypes0.2.3indirecta
PyPIpyyaml6.0.3indirecta
PyPIpyzmq27.1.0indirecta
PyPIreadme-renderer44.0indirecta
PyPIreferencing0.37.0indirecta
PyPIrequests2.32.5indirecta
PyPIrequests-toolbelt1.0.0indirecta
PyPIrfc39862.0.0indirecta
PyPIrich14.2.0indirecta
PyPIrpds-py0.30.0indirecta
PyPIscikit-learn1.7.2indirecta
PyPIscikit-learn1.8.0indirecta
PyPIscipy1.15.3indirecta
PyPIscipy1.17.0indirecta
PyPIseaborn0.13.2indirecta
PyPIsecretstorage3.5.0indirecta
PyPIsession-info1.0.1indirecta
PyPIsetuptools80.10.1indirecta
PyPIsix1.17.0indirecta
PyPIsnowballstemmer3.0.1indirecta
PyPIsoupsieve2.8.3indirecta
PyPIsphinx8.1.3indirecta
PyPIsphinx-autodoc-typehints3.0.1indirecta
PyPIsphinx-book-theme1.1.4indirecta
PyPIsphinx-copybutton0.5.2indirecta
PyPIsphinx-tabs3.4.7indirecta
PyPIsphinxcontrib-applehelp2.0.0indirecta
PyPIsphinxcontrib-bibtex2.6.5indirecta
PyPIsphinxcontrib-devhelp2.0.0indirecta
PyPIsphinxcontrib-htmlhelp2.1.0indirecta
PyPIsphinxcontrib-jsmath1.0.1indirecta
PyPIsphinxcontrib-qthelp2.0.0indirecta
PyPIsphinxcontrib-serializinghtml2.0.0indirecta
PyPIsphinxext-opengraph0.13.0indirecta
PyPIsqlalchemy2.0.46indirecta
PyPIstack-data0.6.3indirecta
PyPIstatannotations0.7.2indirecta
PyPIstatsmodels0.14.6indirecta
PyPIstdlib-list0.12.0indirecta
PyPItabulate0.9.0indirecta
PyPItensorly0.9.0indirecta
PyPIthreadpoolctl3.6.0indirecta
PyPItomli2.4.0indirecta
PyPItornado6.5.4indirecta
PyPItraitlets5.14.3indirecta
PyPItwine6.2.0indirecta
PyPItypeguard4.4.4indirecta
PyPItyping-extensions4.15.0indirecta
PyPItzdata2025.3indirecta
PyPIumap-learn0.5.11indirecta
PyPIurllib32.6.3indirecta
PyPIvirtualenv20.36.1indirecta
PyPIwcwidth0.3.2indirecta
PyPIwrapt2.0.1indirecta
PyPIxlrd2.0.2indirecta
PyPIzarr3.1.5indirecta
PyPIzipp3.23.0indirecta
Avisos de dependencias 13

Este repositorio no publica ningún paquete que el índice resuelva, así que se evaluó su propio grafo de dependencias — 204 paquetes, que incluyen también fijaciones de desarrollo y prueba que nunca se distribuyen: 13 tienen avisos conocidos, de los cuales 0 son directas.

PaqueteVersiónRelaciónGravedadAvisosCorregido en
cryptography46.0.3indirectacrítica748.0.1
pillow12.1.0indirectacrítica3312.3.0
click8.3.1indirectaalta18.3.3
protobuf6.33.4indirectaalta26.33.5
pyarrow23.0.0indirectaalta223.0.1
soupsieve2.8.3indirectaalta42.8.4
tornado6.5.4indirectaalta126.5.7
urllib32.6.3indirectaalta42.7.0
idna3.11indirectamoderada23.15
pytest9.0.2indirectamoderada29.0.3
requests2.32.5indirectamoderada22.33.0
setuptools80.10.1indirectamoderada283.0.0
pygments2.19.2indirectabaja22.20.0

Un aviso significa que la versión registrada en el grafo de dependencias cae dentro del rango afectado de un aviso. No se analiza la alcanzabilidad, y el grafo incluye fijaciones de desarrollo y prueba: un hallazgo puede referirse al utillaje y no al software distribuido.

Informe JSON sin procesar legible por máquina
{
  "data": {
    "repo": {
      "topics": [
        "cell-cell-communication",
        "ligand-receptor",
        "python",
        "single-cell",
        "single-cell-rna-seq",
        "spatial",
        "spatialomics"
      ],
      "is_fork": false,
      "size_kb": 431552,
      "has_wiki": true,
      "homepage": "http://liana-py.readthedocs.io/",
      "languages": {
        "Python": 505951
      },
      "pushed_at": "2026-07-16T13:45:28Z",
      "created_at": "2022-09-22T13:20:35Z",
      "owner_type": "Organization",
      "updated_at": "2026-07-16T13:44:03Z",
      "description": "LIANA+: an all-in-one framework for cell-cell communication",
      "is_archived": false,
      "is_disabled": false,
      "license_spdx": "BSD-3-Clause",
      "default_branch": "main",
      "license_spdx_raw": "BSD-3-Clause",
      "primary_language": "Python",
      "significant_languages": [
        "Python"
      ]
    },
    "owner": {
      "blog": "saezlab.org",
      "name": "Saez Lab",
      "type": "Organization",
      "login": "saezlab",
      "company": null,
      "location": "Germany",
      "followers": 487,
      "avatar_url": "https://avatars.githubusercontent.com/u/9979042?v=4",
      "created_at": "2014-11-27T16:46:34Z",
      "is_verified": null,
      "public_repos": 306,
      "account_age_days": 4254
    },
    "license": {
      "state": "standard",
      "spdx_id": "BSD-3-Clause",
      "raw_spdx": "BSD-3-Clause",
      "file_present": true,
      "scorecard_found": true,
      "profile_has_license": true
    },
    "activity": {
      "releases": [
        {
          "tag": "v1.8.1",
          "kind": "patch",
          "published_at": "2026-07-16T13:45:28Z"
        },
        {
          "tag": "v1.8.0",
          "kind": "minor",
          "published_at": "2026-06-29T12:43:58Z"
        },
        {
          "tag": "1.7.3",
          "kind": "patch",
          "published_at": "2026-05-26T16:53:26Z"
        },
        {
          "tag": "1.7.1",
          "kind": "patch",
          "published_at": "2026-01-24T11:36:03Z"
        },
        {
          "tag": "metalinksdb",
          "kind": "other",
          "published_at": "2026-01-24T10:40:50Z"
        },
        {
          "tag": "v1.7.0",
          "kind": "minor",
          "published_at": "2026-01-11T09:39:14Z"
        },
        {
          "tag": "1.6.1",
          "kind": "patch",
          "published_at": "2025-09-28T14:20:34Z"
        },
        {
          "tag": "v1.6.0",
          "kind": "minor",
          "published_at": "2025-07-14T10:02:34Z"
        },
        {
          "tag": "1.5.1",
          "kind": "patch",
          "published_at": "2025-02-13T17:58:20Z"
        },
        {
          "tag": "v1.5.0",
          "kind": "minor",
          "published_at": "2025-01-17T17:50:28Z"
        },
        {
          "tag": "1.4.0",
          "kind": "minor",
          "published_at": "2024-09-02T10:20:57Z"
        },
        {
          "tag": "1.3.0",
          "kind": "minor",
          "published_at": "2024-07-18T11:49:07Z"
        },
        {
          "tag": "1.2.1",
          "kind": "patch",
          "published_at": "2024-06-12T07:42:52Z"
        },
        {
          "tag": "1.2.0",
          "kind": "minor",
          "published_at": "2024-05-24T18:30:58Z"
        },
        {
          "tag": "1.1.0",
          "kind": "minor",
          "published_at": "2024-04-12T09:01:13Z"
        },
        {
          "tag": "1.0.5",
          "kind": "patch",
          "published_at": "2024-03-14T06:34:11Z"
        },
        {
          "tag": "1.0.4",
          "kind": "patch",
          "published_at": "2024-01-17T16:09:53Z"
        },
        {
          "tag": "1.0.3",
          "kind": "patch",
          "published_at": "2023-11-10T18:52:01Z"
        },
        {
          "tag": "1.0.2",
          "kind": "patch",
          "published_at": "2023-10-26T06:45:07Z"
        },
        {
          "tag": "1.0.1",
          "kind": "patch",
          "published_at": "2023-10-01T21:49:48Z"
        },
        {
          "tag": "1.0.0a1",
          "kind": "other",
          "published_at": "2023-09-06T09:35:42Z"
        },
        {
          "tag": "1.0.0a0",
          "kind": "other",
          "published_at": "2023-07-27T10:28:59Z"
        },
        {
          "tag": "0.1.9",
          "kind": "patch",
          "published_at": "2023-07-10T18:26:53Z"
        },
        {
          "tag": "0.1.8",
          "kind": "patch",
          "published_at": "2023-06-06T12:20:40Z"
        }
      ],
      "recent_commits": [
        {
          "oid": "705bcf9dd9faa2257fee30e624a9690d0ddb932f",
          "body": null,
          "is_bot": false,
          "headline": "add mofaflow to decision tree",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-07-16T13:31:48Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5f3886509c69b6185cb24de927986a12051958d5",
          "body": null,
          "is_bot": false,
          "headline": "fix float64 leak",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-07-16T13:00:01Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8f52076efc1f92ba4bdf031b86bfc8f941ccd96d",
          "body": null,
          "is_bot": false,
          "headline": "copy correctly; fix links; deterministic mofaflex",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-07-16T12:37:54Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "65e279a94bb10f1a8cd470666ee52f9fc33c9b18",
          "body": "Release 1.8.1: LRIC/cross-PCF memory & perf refactor (#245), MistyData uns/obsm\npreservation (#242), expand_coordinates utility + MOFA-Flex tutorial (#238),\nand pandas<3 pin for rank_aggregate/by_sample compatibility (#244).\n\nCo-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>",
          "is_bot": false,
          "headline": "Bump version: 1.8.0 → 1.8.1",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-07-15T19:11:24Z",
          "body_truncated": false,
          "is_coding_agent": true
        },
        {
          "oid": "0296f50836a2a91064bd54ce6025b2d5af464d6f",
          "body": "Keeps docs/notebooks/models/ (trained MOFA-Flex models) out of the repo.\n\nCo-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>",
          "is_bot": false,
          "headline": "chore: ignore *.hdf5 model files",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-07-15T19:11:00Z",
          "body_truncated": false,
          "is_coding_agent": true
        },
        {
          "oid": "b55b2365e748e5e254ede6b8db130d51f964077e",
          "body": "inflow_mofaflex.ipynb: re-executed with dpi_save=50 and a load-if-exists guard\non the (GPU-trained) model so the tutorial is reproducible; dissection now focuses\non Factor 4 (GABAergic-neuron enkephalin/opioid, striatal) and Factor 1 (FGF/ECM\ntrophic niche), with the biology narrative rewritten to match the fitted model.\n\nLRIC_tutorial.ipynb: re-executed to reflect the updated LRIC/cross-PCF numerics\nfrom #245.\n\nCo-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>",
          "is_bot": false,
          "headline": "docs: rerun MOFA-Flex and LRIC tutorials",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-07-15T19:11:00Z",
          "body_truncated": false,
          "is_coding_agent": true
        },
        {
          "oid": "21e8af68102455235e7e689cdd88b257b7231acf",
          "body": "From AtheerAS:fix/LRIC. Introduces prep_check_adata-based unified preprocessing,\nchunked (pair_chunk) sparse scale-matrix multiplication to bound peak memory,\nsparse_distance_matrix/searchsorted binning, and a .raw-subsetting correctness\nfix (updates test reference values). Removes _filter_by_min_cells/_spatial_pairs.\n\nCo-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>",
          "is_bot": false,
          "headline": "Merge #245: LRIC/CrossPCF memory & performance refactor",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-07-15T17:22:20Z",
          "body_truncated": false,
          "is_coding_agent": true
        },
        {
          "oid": "6a89d7bb7d79f20e9a356023500de1ff2b6ea335",
          "body": "#244a (AnnData `dtype=` removal in >=0.11) is already resolved in the pipeline.\n#244b (pandas 3.0 Copy-on-Write turns the chained `inplace` fillna on\n`lrs_to_keep` into a no-op, and string-typed columns coerce the internal\nNone-labelled score column to 'nan') breaks rank_aggregate consensus/by_sample.\nFull pandas-3.0 support is broader than this issue, so pin <3 for now.\n\nCo-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>",
          "is_bot": false,
          "headline": "fix: pin pandas<3 pending pandas-3.0 support (#244)",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-07-15T17:16:45Z",
          "body_truncated": false,
          "is_coding_agent": true
        },
        {
          "oid": "f3a67d6725f5e8c7ed6337b1c366c50b007ab8c2",
          "body": null,
          "is_bot": false,
          "headline": "change fig",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-07-15T16:07:30Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "725be83b2c4a1bfbb1a82de99a678290cb8815dc",
          "body": null,
          "is_bot": false,
          "headline": "Fix LRIC performance and memory issues",
          "author_name": "AtheerAS",
          "author_login": "AtheerAS",
          "committed_at": "2026-07-14T21:29:09Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "348f943e474077522e66e015a63603cd033c95c6",
          "body": null,
          "is_bot": false,
          "headline": "extend",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-07-10T14:22:26Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1d50c7a8dfbc0a461c35fbf7b1803d082da56893",
          "body": null,
          "is_bot": false,
          "headline": "adjust tuto",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-07-08T14:07:22Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "92346aeaa4929bb03a3c2fdf1cc482437fb0d94e",
          "body": null,
          "is_bot": false,
          "headline": "adjust exand coords",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-07-08T12:20:49Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8dea8584b68670212e6a8b3c4ad3bc5cae1477ca",
          "body": "…oordinates on a non-overlapping grid",
          "is_bot": false,
          "headline": "Add _expand_coordinates utility for laying out multi-sample spatial c…",
          "author_name": "AtheerAS",
          "author_login": "AtheerAS",
          "committed_at": "2026-07-05T11:23:36Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "0b9a9aa2c9cc53b9ef122efc4defa73667679a94",
          "body": null,
          "is_bot": false,
          "headline": "Update notebook",
          "author_name": "AtheerAS",
          "author_login": "AtheerAS",
          "committed_at": "2026-07-03T15:21:08Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a6ce2d12a244cf269a8fa43b0fb108992b077df9",
          "body": null,
          "is_bot": false,
          "headline": "inflow - MOFAflex notebook & util",
          "author_name": "AtheerAS",
          "author_login": "AtheerAS",
          "committed_at": "2026-07-02T21:59:11Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "18d574b9e3b6c1c436663ce8999b9931b442c294",
          "body": null,
          "is_bot": false,
          "headline": "title fix",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-06-29T12:28:25Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9788e7f30c957f83128d119c1d8e48ddb9ba5c37",
          "body": null,
          "is_bot": false,
          "headline": "improve diagram",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-06-29T12:20:05Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "c64c4adaa4a196eb6f973ed33cc47cb2905d81f9",
          "body": null,
          "is_bot": false,
          "headline": "Bump version: 1.7.3 → 1.8.0",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-06-29T12:14:24Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6cc62f72d73421bdabdec9d0d92152b937007ae7",
          "body": "Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>",
          "is_bot": false,
          "headline": "docs: changelog for 1.8.0 (LRIC, cross-PCF, pyCrossTalkeR)",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-06-29T12:13:23Z",
          "body_truncated": false,
          "is_coding_agent": true
        },
        {
          "oid": "f193ba3ecad4cb435a957ef348820ea1f90fede7",
          "body": null,
          "is_bot": false,
          "headline": "update tree and docs",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-06-29T12:09:54Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6be05952f7a205993d6a4757e65b04ee7ea52f71",
          "body": null,
          "is_bot": false,
          "headline": "improve API + merge crosstalker",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-06-29T11:49:44Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "290a9148af032521e2aa51138a986ccb79af7477",
          "body": "(cherry picked from commit 9da871ea8729a2511af1bb99fd5e422b8e8a05dd)",
          "is_bot": false,
          "headline": "fix version and from_liana",
          "author_name": "jsnagai",
          "author_login": "jsnagai",
          "committed_at": "2026-06-29T11:36:07Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "40b8b4c64788c360782edf848752db0fdd24864f",
          "body": null,
          "is_bot": false,
          "headline": "fix on decimal instability in weighted spearman",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-06-29T11:16:29Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "170c2264423618124dc9c0dbc69613f2d978e0a8",
          "body": null,
          "is_bot": false,
          "headline": "add help plots",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-06-29T10:31:35Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5a1f0a1ed2ffc4ffc9a03ae5f34684a82d9b1ade",
          "body": null,
          "is_bot": false,
          "headline": "expand definitions + acknowledge prior work",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-06-29T09:37:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "14d61e6a7c4a56caa1f225e657d93a90c3a475dc",
          "body": null,
          "is_bot": false,
          "headline": "resolve linting etc",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-06-29T07:44:29Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "440206efd9a837f982b0fcb1170e785d9e8de98e",
          "body": null,
          "is_bot": false,
          "headline": "first pass",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-06-29T07:13:53Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b0e8cb6c1eea73c0842192ea8da24875dac7b4a1",
          "body": null,
          "is_bot": false,
          "headline": "remove np.log1p call from linear_transform",
          "author_name": "AtheerAS",
          "author_login": "AtheerAS",
          "committed_at": "2026-06-25T18:07:16Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fb062e80b84101aa677e55565d8d0c7347735fcd",
          "body": null,
          "is_bot": false,
          "headline": "Add overview figure",
          "author_name": "AtheerAS",
          "author_login": "AtheerAS",
          "committed_at": "2026-06-25T17:45:21Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "908f1520a678a3673fdd30907388a4886cee8bfb",
          "body": null,
          "is_bot": false,
          "headline": "Address PR review comments",
          "author_name": "AtheerAS",
          "author_login": "AtheerAS",
          "committed_at": "2026-06-25T17:23:36Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "71999e6313516da370448128e636821e583c1d8d",
          "body": null,
          "is_bot": false,
          "headline": "wPCF notebook & functions",
          "author_name": "AtheerAS",
          "author_login": "AtheerAS",
          "committed_at": "2026-06-05T13:33:38Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "850d3b24558332d41cd3f8731d139223f609b63c",
          "body": "Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>",
          "is_bot": false,
          "headline": "bump version to 1.7.3",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-05-26T16:48:38Z",
          "body_truncated": false,
          "is_coding_agent": true
        },
        {
          "oid": "7d61c033744f7b7b3a08231347eb1d9582e487a3",
          "body": null,
          "is_bot": false,
          "headline": "update hcop call",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-05-26T16:23:50Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d776ba253a4ee382cbb2d9a0f4925bf12f522389",
          "body": null,
          "is_bot": false,
          "headline": "strip unneeded signatures",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-05-26T16:15:08Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1e43c069b427f80d331fc37d8bc0c6036689c1c0",
          "body": null,
          "is_bot": false,
          "headline": "make sure the notebook runs",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-05-14T08:59:26Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b0da6f5c9b72780150eedd6ef76f8c18ad310318",
          "body": "- Add mypy type-checking note in Code-style section\n- Document the new build.yaml CI workflow (uv build + twine check)\n- Fix bump2version → bumpversion (aligns with pyproject.toml dev dep)\n- Update README CI badge URL: main.yml → test.yml (workflow rename)\n\nCo-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>",
          "is_bot": false,
          "headline": "docs: update contributing guide for mypy, build CI, and bumpversion",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-05-14T08:51:20Z",
          "body_truncated": false,
          "is_coding_agent": true
        },
        {
          "oid": "e2b49dc924207d1ee2c435cfc778cc1952f8d7da",
          "body": "…build CI)\n\nResolves 6 merge conflicts with HEAD (v1.7.x spatial proximity features,\nGCS-based orthology, target_organism param). Fixes ruff/mypy pre-commit\nfailures introduced by the PR: Callable annotations, missing return\nstatements, var-annotated type hints, and structural type-ignore comments.\n\nCo-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>",
          "is_bot": false,
          "headline": "Merge PR #219: doc update (NumPy docstrings, type annotations, mypy, …",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-05-14T08:50:24Z",
          "body_truncated": false,
          "is_coding_agent": true
        },
        {
          "oid": "c011dfeb909a1c0a2043a8648b0f09dc6ff96be1",
          "body": null,
          "is_bot": false,
          "headline": "metalinks sync",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-05-14T08:24:50Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e7617fe0a30e2eba1344bd0ea29a8db158fec039",
          "body": "- Replace defunct EBI FTP URL with HGNC Google Cloud Storage bucket\n- Add target_organism parameter (default \"mouse\") to get_hcop_orthologs,\n  supporting all 19 HCOP species\n- Update prior_knowledge.ipynb to use new target_organism API\n- Update CHANGELOG for 1.7.2\n\nCo-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>",
          "is_bot": false,
          "headline": "fix orthology: switch HCOP to GCS, add target_organism param",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-05-14T08:05:56Z",
          "body_truncated": false,
          "is_coding_agent": true
        },
        {
          "oid": "e0a50da4e034cd19590d8b36af18bd554e2423d7",
          "body": null,
          "is_bot": false,
          "headline": "merge solution from decoupler",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-05-14T07:56:22Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "30a9859eb9d1b57be02e6f43b6be355632aa1722",
          "body": null,
          "is_bot": false,
          "headline": "extend figs",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-05-14T07:31:15Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "3ce3dcce473617be319797c83b8b6c153f3eb97d",
          "body": null,
          "is_bot": false,
          "headline": "docs versions",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-24T11:44:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "276fc05d065006680940f1611e33aa9f04a683c4",
          "body": null,
          "is_bot": false,
          "headline": "fix logo location",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-24T11:30:09Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "eb7cc85b4a3767b88d63b7ff72963e64e79b7728",
          "body": null,
          "is_bot": false,
          "headline": "adjust link",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-24T11:25:45Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fb531d64c3edd97f78e8fde2ab38288381f77b5d",
          "body": "Metalinks access",
          "is_bot": false,
          "headline": "Merge pull request #228 from saezlab/metalinks_access",
          "author_name": "Daniel Dimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-24T11:23:23Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a41a3ba396acd5f5d98439abdbb95dc2d04ae6d5",
          "body": null,
          "is_bot": false,
          "headline": "clarify tree",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-24T11:21:20Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "601a57b911e30ef671ea64ca9264631b3605487f",
          "body": null,
          "is_bot": false,
          "headline": "test mermaid",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-24T11:16:15Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f31dcf40edf03db52e4bdb46ac0fda52a129c0a6",
          "body": null,
          "is_bot": false,
          "headline": "test to decimal",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-24T11:08:04Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7c02c318b772a542e9180eec5ce54272921caa17",
          "body": null,
          "is_bot": false,
          "headline": "adjust acc to scanpy version",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-24T10:56:09Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "70bf35c86028f9719f3fcd47e77d98153564a977",
          "body": null,
          "is_bot": false,
          "headline": "Bump version: 1.7.0 → 1.7.1",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-24T10:44:03Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6ad8488ee541ff19fe746f8539af2aef77f9cc6b",
          "body": null,
          "is_bot": false,
          "headline": "update to gh release",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-24T10:43:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "305ea037078103ae4b327a8bc6f9225e10b17bf8",
          "body": null,
          "is_bot": false,
          "headline": "simplify",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T20:24:19Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "85e84b3052442d6654545de103ac952ef2fafd8c",
          "body": null,
          "is_bot": false,
          "headline": "add more headers",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T20:06:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "25ff730f522801485dcbc70a337834c6ea58270f",
          "body": null,
          "is_bot": false,
          "headline": "improve header formating",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T20:00:43Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "180c6d2b0d35b88afb1bacfdd8d6308deadb4497",
          "body": "v1.7.0",
          "is_bot": false,
          "headline": "v1.7.0",
          "author_name": "Daniel Dimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T19:50:40Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "59a3546682f228112932796490ecc3dc7abd2c24",
          "body": null,
          "is_bot": false,
          "headline": "ensure metalinksdb gets properly downloaded",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T19:45:56Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "01381ba1006fdfc5676a14a15792d5d40af08de1",
          "body": "…tion\n\nCo-authored-by: dbdimitrov <50865230+dbdimitrov@users.noreply.github.com>",
          "is_bot": true,
          "headline": "Revert groupby parameter change - '@label' is correct internal conven…",
          "author_name": "copilot-swe-agent[bot]",
          "author_login": "Copilot",
          "committed_at": "2026-01-07T18:59:45Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "5ab0b43b8946ebe0ea8edf03a6f39283f9db7671",
          "body": "Co-authored-by: dbdimitrov <50865230+dbdimitrov@users.noreply.github.com>",
          "is_bot": true,
          "headline": "Address code review comments: fix formatting, typos, and unused imports",
          "author_name": "copilot-swe-agent[bot]",
          "author_login": "Copilot",
          "committed_at": "2026-01-07T18:56:50Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f897876be47b7be8ec7253acdc52b7d5419c837d",
          "body": null,
          "is_bot": true,
          "headline": "Initial plan",
          "author_name": "copilot-swe-agent[bot]",
          "author_login": "Copilot",
          "committed_at": "2026-01-07T18:48:01Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7fe04a64e03dcf57f3e41736d91551ac953b9d77",
          "body": null,
          "is_bot": false,
          "headline": "update dependencies",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T18:37:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d98539f6e7fa64c0f210c5c8912f340aba39ab3d",
          "body": null,
          "is_bot": false,
          "headline": "resolve #220",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T18:31:49Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "0b44e13bdc4866aa28641e3bfd543ec4a3c1b2f2",
          "body": null,
          "is_bot": false,
          "headline": "add installation",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T14:57:12Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e546f35fb7c554503ab816d49d1330031264ff03",
          "body": null,
          "is_bot": false,
          "headline": "add some plots",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T14:26:36Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "cdbcbbc658665ae361b41bfc34a39e96116e750d",
          "body": null,
          "is_bot": false,
          "headline": "update tutorial",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T10:56:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1066c1c5ca9e68d3f265073c9db64e915c03a73b",
          "body": null,
          "is_bot": false,
          "headline": "remove wrong imports",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T08:38:09Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a18b1f64f375c6c0e045f9a4d82e577c65006b40",
          "body": null,
          "is_bot": false,
          "headline": "add 3.13 to toml #216",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T08:24:36Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "50bea1c5b97dc5bfd468d08bd132da828143deed",
          "body": null,
          "is_bot": false,
          "headline": "Bump version: 1.6.1 → 1.7.0",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T08:20:13Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dab259fc5417a778e771ce0e4374dd86f36b24c0",
          "body": null,
          "is_bot": false,
          "headline": "fix import issue",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2026-01-07T08:12:42Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "52216835c5b380c57ddadec9bba9ae4329116078",
          "body": null,
          "is_bot": false,
          "headline": "update tests",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-19T12:28:59Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fe80ec95e50325af659f2df1727e9a98d46ecf2d",
          "body": null,
          "is_bot": false,
          "headline": "Update inflow score",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-18T13:42:44Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "070683da9f76d3198b297ffa198b5f1db2969709",
          "body": null,
          "is_bot": false,
          "headline": "add adata to mudata function",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-17T21:02:50Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "45a8fb7ab51d1776c8b4cf0b4dbc8a1b2624108a",
          "body": null,
          "is_bot": false,
          "headline": "Update inflow notebook",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-17T20:31:09Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1773dfe2d0772005f1f562f6b65c5dd700092b6d",
          "body": null,
          "is_bot": false,
          "headline": "Line wrapping and examples in `obsm_to_adata.py`",
          "author_name": "Nicolas Palacio",
          "author_login": "npalacioescat",
          "committed_at": "2025-12-15T12:39:26Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e774b5262dd5b5087161484d5845ffbe389cee07",
          "body": null,
          "is_bot": false,
          "headline": "Line wrap and examples in `quary_bandwidth.py`",
          "author_name": "Nicolas Palacio",
          "author_login": "npalacioescat",
          "committed_at": "2025-12-09T13:44:04Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "33b79828880959bcc1c88bc3da35822944ba870c",
          "body": null,
          "is_bot": false,
          "headline": "Line wrapping and examples in `spatial_neighbors.py`",
          "author_name": "Nicolas Palacio",
          "author_login": "npalacioescat",
          "committed_at": "2025-12-09T13:08:41Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dfcc59b2bfab1e5c4cdd26a7d2c1d12e4ad2b575",
          "body": null,
          "is_bot": false,
          "headline": "Update inflow score notebook",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-05T15:52:07Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dce5cb5f357ca0935acee8b4035c4d0219578d1a",
          "body": null,
          "is_bot": false,
          "headline": "update compute specificity",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-05T13:30:53Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "998a5e8073036f29ffa76487dc164df73aabd35f",
          "body": null,
          "is_bot": false,
          "headline": "add unittest for global spec",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-05T12:51:02Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "21d889ba207ace134c26d6f6b207e1859718f494",
          "body": null,
          "is_bot": false,
          "headline": "changes to global spec",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-04T22:27:31Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "bf4e27a696d8103d77f3e21e5e6166f2579e8e81",
          "body": null,
          "is_bot": false,
          "headline": "del heatmap fun",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-04T16:28:54Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "21257b8ac05ee25cdd7ed41f1005f7c550991ca1",
          "body": null,
          "is_bot": false,
          "headline": "Update global specificity function - omit loops",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-03T15:21:26Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1aa0d4092f4e254344a5d22ce0d1f3dfc1a01df7",
          "body": null,
          "is_bot": false,
          "headline": "drop gini metrics",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-03T12:54:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "da11dd99847dffab154613265ccab92533354108",
          "body": null,
          "is_bot": false,
          "headline": "Update inflow.var operations: gini",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-03T12:19:14Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "2ba87d9ea40eb07188f674564b5b6e95c4413325",
          "body": null,
          "is_bot": false,
          "headline": "add comment",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2025-12-03T08:18:16Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "47a4ed30c12ee6dac330441f74d748a780315cd8",
          "body": null,
          "is_bot": false,
          "headline": "mask acc to filter",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2025-12-03T07:56:13Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f31e55b4836b4e96aee137b39e9332e6fa177207",
          "body": null,
          "is_bot": false,
          "headline": "merge spatial weights",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2025-12-03T06:51:07Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "ad98024cfe3fdc447407a7495ff54f1e99078b0f",
          "body": null,
          "is_bot": false,
          "headline": "merge",
          "author_name": "dbdimitrov",
          "author_login": "dbdimitrov",
          "committed_at": "2025-12-03T06:45:34Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b2882f8f7246d4bfd065d95cda1df040f51d9b64",
          "body": null,
          "is_bot": false,
          "headline": "Update inflow-related functions",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-02T20:27:19Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9740b189a5d4644d4afedb1a4ea64b15dadf534a",
          "body": null,
          "is_bot": false,
          "headline": "Inflow updates",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-02T18:26:21Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a4219bc6e13ed3e856ee02c15f0470ae8c424838",
          "body": null,
          "is_bot": false,
          "headline": "Examples and line wrapping in `utils/transform.py`",
          "author_name": "Nicolas Palacio",
          "author_login": "npalacioescat",
          "committed_at": "2025-12-02T12:10:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "69858ddf9ba9947b25b862320ec659b1dc35bbe4",
          "body": null,
          "is_bot": false,
          "headline": "Line wrapping in `__init__.py`",
          "author_name": "Nicolas Palacio",
          "author_login": "npalacioescat",
          "committed_at": "2025-12-02T11:59:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f53ebfae4ff42a3840372534baa9c9ae8c7e25ea",
          "body": null,
          "is_bot": false,
          "headline": "Line wrapping for `_logging.py`",
          "author_name": "Nicolas Palacio",
          "author_login": "npalacioescat",
          "committed_at": "2025-12-02T11:55:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d997f263ad5e9a9107af17e31878a9f3244f26bf",
          "body": null,
          "is_bot": false,
          "headline": "unittest for global_specificity",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-02T11:25:45Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6d6401979c777b7889c157df862019e6a899bb53",
          "body": null,
          "is_bot": false,
          "headline": "Add inflow_spatial unittest",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-02T11:15:25Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7c04f895ca4c5e8e7a179e02e45ca36e6889bf2b",
          "body": null,
          "is_bot": false,
          "headline": "Update spatial_inflow plot function",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-01T23:29:49Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "2ddcee85bb57663da53a7ffc71c1cfb3d767d2ca",
          "body": "…tmap plot function",
          "is_bot": false,
          "headline": "Add unittest for heatmap, update global specificity function, and hea…",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-12-01T15:46:32Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "352dbbfcc7bf331071bbfce3fbb722928d177e5c",
          "body": null,
          "is_bot": false,
          "headline": "Update functions",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-11-28T19:15:14Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b3b7abff667cb800609e202c047413f3352fad89",
          "body": null,
          "is_bot": false,
          "headline": "Update inflow-related plots functions",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-11-28T18:47:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1347885c596bef8bb93826fc6cb36e9965ba582c",
          "body": null,
          "is_bot": false,
          "headline": "Update inflow-related functions",
          "author_name": "Atheer Alsayah",
          "author_login": null,
          "committed_at": "2025-11-27T20:42:25Z",
          "body_truncated": false,
          "is_coding_agent": false
        }
      ],
      "releases_count": 24,
      "commits_last_year": 181,
      "latest_release_at": "2026-07-16T13:45:28Z",
      "latest_release_tag": "v1.8.1",
      "releases_from_tags": false,
      "days_since_last_push": 5,
      "active_weeks_last_year": 22,
      "days_since_latest_release": 5,
      "mean_days_between_releases": 60.5
    },
    "community": {
      "has_readme": true,
      "has_license": true,
      "has_description": true,
      "has_contributing": true,
      "health_percentage": 62,
      "has_issue_template": false,
      "has_code_of_conduct": false,
      "has_pull_request_template": false
    },
    "ecosystem": {
      "packages": [
        {
          "name": "liana",
          "exists": true,
          "license": null,
          "keywords": [
            "Programming Language :: Python :: 3 :: Only",
            "Programming Language :: Python :: 3.10",
            "Programming Language :: Python :: 3.11",
            "Programming Language :: Python :: 3.12",
            "Programming Language :: Python :: 3.13"
          ],
          "ecosystem": "pypi",
          "matches_repo": true,
          "registry_url": "https://pypi.org/project/liana/",
          "is_deprecated": false,
          "latest_version": "1.8.1",
          "repository_url": "https://github.com/saezlab/liana-py",
          "versions_count": 29,
          "total_downloads": null,
          "dependents_count": null,
          "deprecation_note": null,
          "maintainers_count": null,
          "monthly_downloads": null,
          "first_published_at": "2022-11-15T15:47:33.742319Z",
          "latest_published_at": "2026-07-16T13:46:03.585343Z",
          "latest_version_yanked": null,
          "days_since_latest_publish": 5
        }
      ]
    },
    "popularity": {
      "forks": 34,
      "stars": 305,
      "watchers": 1,
      "fork_history": {
        "days": [
          {
            "date": "2023-01-31",
            "count": 1
          },
          {
            "date": "2023-03-22",
            "count": 1
          },
          {
            "date": "2023-04-20",
            "count": 1
          },
          {
            "date": "2023-04-26",
            "count": 1
          },
          {
            "date": "2023-05-08",
            "count": 1
          },
          {
            "date": "2023-07-05",
            "count": 1
          },
          {
            "date": "2023-09-23",
            "count": 1
          },
          {
            "date": "2023-10-23",
            "count": 1
          },
          {
            "date": "2023-10-25",
            "count": 1
          },
          {
            "date": "2024-02-11",
            "count": 1
          },
          {
            "date": "2024-04-29",
            "count": 1
          },
          {
            "date": "2024-05-15",
            "count": 1
          },
          {
            "date": "2024-06-04",
            "count": 2
          },
          {
            "date": "2024-08-03",
            "count": 1
          },
          {
            "date": "2024-09-03",
            "count": 2
          },
          {
            "date": "2024-09-04",
            "count": 1
          },
          {
            "date": "2024-09-10",
            "count": 1
          },
          {
            "date": "2024-09-21",
            "count": 1
          },
          {
            "date": "2024-12-16",
            "count": 1
          },
          {
            "date": "2025-01-21",
            "count": 1
          },
          {
            "date": "2025-03-15",
            "count": 1
          },
          {
            "date": "2025-04-01",
            "count": 1
          },
          {
            "date": "2025-05-25",
            "count": 1
          },
          {
            "date": "2025-06-23",
            "count": 1
          },
          {
            "date": "2025-11-18",
            "count": 1
          },
          {
            "date": "2025-12-03",
            "count": 1
          },
          {
            "date": "2026-02-05",
            "count": 1
          },
          {
            "date": "2026-03-31",
            "count": 1
          },
          {
            "date": "2026-04-15",
            "count": 1
          },
          {
            "date": "2026-04-16",
            "count": 1
          },
          {
            "date": "2026-05-16",
            "count": 1
          },
          {
            "date": "2026-07-10",
            "count": 1
          }
        ],
        "complete": true,
        "collected": 34,
        "total_forks": 34
      },
      "star_history": {
        "days": [
          {
            "date": "2022-10-21",
            "count": 2
          },
          {
            "date": "2022-10-26",
            "count": 3
          },
          {
            "date": "2022-11-10",
            "count": 1
          },
          {
            "date": "2022-11-15",
            "count": 2
          },
          {
            "date": "2022-12-07",
            "count": 1
          },
          {
            "date": "2022-12-10",
            "count": 1
          },
          {
            "date": "2023-01-25",
            "count": 1
          },
          {
            "date": "2023-02-05",
            "count": 1
          },
          {
            "date": "2023-02-17",
            "count": 1
          },
          {
            "date": "2023-02-21",
            "count": 1
          },
          {
            "date": "2023-02-22",
            "count": 1
          },
          {
            "date": "2023-02-27",
            "count": 1
          },
          {
            "date": "2023-03-08",
            "count": 1
          },
          {
            "date": "2023-04-06",
            "count": 1
          },
          {
            "date": "2023-04-14",
            "count": 1
          },
          {
            "date": "2023-04-18",
            "count": 1
          },
          {
            "date": "2023-04-27",
            "count": 1
          },
          {
            "date": "2023-05-02",
            "count": 3
          },
          {
            "date": "2023-05-03",
            "count": 1
          },
          {
            "date": "2023-05-08",
            "count": 2
          },
          {
            "date": "2023-05-19",
            "count": 1
          },
          {
            "date": "2023-05-24",
            "count": 2
          },
          {
            "date": "2023-06-02",
            "count": 1
          },
          {
            "date": "2023-06-05",
            "count": 1
          },
          {
            "date": "2023-06-08",
            "count": 1
          },
          {
            "date": "2023-06-09",
            "count": 1
          },
          {
            "date": "2023-06-14",
            "count": 1
          },
          {
            "date": "2023-06-19",
            "count": 1
          },
          {
            "date": "2023-06-23",
            "count": 1
          },
          {
            "date": "2023-07-01",
            "count": 1
          },
          {
            "date": "2023-07-12",
            "count": 1
          },
          {
            "date": "2023-07-27",
            "count": 2
          },
          {
            "date": "2023-07-29",
            "count": 1
          },
          {
            "date": "2023-08-11",
            "count": 1
          },
          {
            "date": "2023-08-22",
            "count": 2
          },
          {
            "date": "2023-08-23",
            "count": 7
          },
          {
            "date": "2023-08-24",
            "count": 1
          },
          {
            "date": "2023-08-25",
            "count": 2
          },
          {
            "date": "2023-08-26",
            "count": 1
          },
          {
            "date": "2023-08-29",
            "count": 1
          },
          {
            "date": "2023-09-01",
            "count": 1
          },
          {
            "date": "2023-09-05",
            "count": 1
          },
          {
            "date": "2023-09-06",
            "count": 1
          },
          {
            "date": "2023-09-08",
            "count": 1
          },
          {
            "date": "2023-09-10",
            "count": 1
          },
          {
            "date": "2023-09-11",
            "count": 1
          },
          {
            "date": "2023-09-12",
            "count": 1
          },
          {
            "date": "2023-09-15",
            "count": 1
          },
          {
            "date": "2023-09-20",
            "count": 2
          },
          {
            "date": "2023-09-26",
            "count": 1
          },
          {
            "date": "2023-09-28",
            "count": 2
          },
          {
            "date": "2023-10-01",
            "count": 1
          },
          {
            "date": "2023-10-23",
            "count": 1
          },
          {
            "date": "2023-10-24",
            "count": 1
          },
          {
            "date": "2023-10-25",
            "count": 1
          },
          {
            "date": "2023-10-26",
            "count": 1
          },
          {
            "date": "2023-10-31",
            "count": 1
          },
          {
            "date": "2023-11-01",
            "count": 1
          },
          {
            "date": "2023-11-03",
            "count": 1
          },
          {
            "date": "2023-11-05",
            "count": 1
          },
          {
            "date": "2023-11-08",
            "count": 1
          },
          {
            "date": "2023-11-09",
            "count": 1
          },
          {
            "date": "2023-11-19",
            "count": 1
          },
          {
            "date": "2023-11-23",
            "count": 1
          },
          {
            "date": "2023-12-01",
            "count": 1
          },
          {
            "date": "2023-12-04",
            "count": 1
          },
          {
            "date": "2023-12-11",
            "count": 1
          },
          {
            "date": "2023-12-12",
            "count": 1
          },
          {
            "date": "2023-12-18",
            "count": 2
          },
          {
            "date": "2023-12-21",
            "count": 1
          },
          {
            "date": "2023-12-29",
            "count": 1
          },
          {
            "date": "2024-01-04",
            "count": 1
          },
          {
            "date": "2024-01-05",
            "count": 1
          },
          {
            "date": "2024-01-21",
            "count": 1
          },
          {
            "date": "2024-02-02",
            "count": 1
          },
          {
            "date": "2024-02-05",
            "count": 1
          },
          {
            "date": "2024-02-06",
            "count": 2
          },
          {
            "date": "2024-02-08",
            "count": 2
          },
          {
            "date": "2024-02-14",
            "count": 1
          },
          {
            "date": "2024-02-23",
            "count": 1
          },
          {
            "date": "2024-03-05",
            "count": 1
          },
          {
            "date": "2024-03-07",
            "count": 2
          },
          {
            "date": "2024-03-20",
            "count": 1
          },
          {
            "date": "2024-03-31",
            "count": 1
          },
          {
            "date": "2024-04-08",
            "count": 1
          },
          {
            "date": "2024-04-12",
            "count": 1
          },
          {
            "date": "2024-04-15",
            "count": 1
          },
          {
            "date": "2024-04-16",
            "count": 1
          },
          {
            "date": "2024-04-26",
            "count": 1
          },
          {
            "date": "2024-05-12",
            "count": 1
          },
          {
            "date": "2024-05-15",
            "count": 1
          },
          {
            "date": "2024-05-21",
            "count": 1
          },
          {
            "date": "2024-05-27",
            "count": 1
          },
          {
            "date": "2024-05-28",
            "count": 1
          },
          {
            "date": "2024-06-06",
            "count": 1
          },
          {
            "date": "2024-06-08",
            "count": 1
          },
          {
            "date": "2024-06-13",
            "count": 1
          },
          {
            "date": "2024-06-16",
            "count": 1
          },
          {
            "date": "2024-06-17",
            "count": 1
          },
          {
            "date": "2024-06-19",
            "count": 1
          },
          {
            "date": "2024-06-20",
            "count": 1
          },
          {
            "date": "2024-06-26",
            "count": 1
          },
          {
            "date": "2024-06-28",
            "count": 1
          },
          {
            "date": "2024-06-30",
            "count": 2
          },
          {
            "date": "2024-07-02",
            "count": 1
          },
          {
            "date": "2024-07-03",
            "count": 2
          },
          {
            "date": "2024-07-11",
            "count": 1
          },
          {
            "date": "2024-07-16",
            "count": 1
          },
          {
            "date": "2024-07-19",
            "count": 1
          },
          {
            "date": "2024-07-25",
            "count": 1
          },
          {
            "date": "2024-07-28",
            "count": 1
          },
          {
            "date": "2024-08-03",
            "count": 1
          },
          {
            "date": "2024-08-08",
            "count": 1
          },
          {
            "date": "2024-08-11",
            "count": 1
          },
          {
            "date": "2024-08-12",
            "count": 1
          },
          {
            "date": "2024-08-15",
            "count": 1
          },
          {
            "date": "2024-09-02",
            "count": 1
          },
          {
            "date": "2024-09-03",
            "count": 3
          },
          {
            "date": "2024-09-04",
            "count": 2
          },
          {
            "date": "2024-09-06",
            "count": 1
          },
          {
            "date": "2024-09-10",
            "count": 1
          },
          {
            "date": "2024-09-17",
            "count": 1
          },
          {
            "date": "2024-09-18",
            "count": 2
          },
          {
            "date": "2024-09-19",
            "count": 1
          },
          {
            "date": "2024-10-07",
            "count": 1
          },
          {
            "date": "2024-10-11",
            "count": 2
          },
          {
            "date": "2024-10-21",
            "count": 1
          },
          {
            "date": "2024-10-23",
            "count": 1
          },
          {
            "date": "2024-10-24",
            "count": 1
          },
          {
            "date": "2024-11-03",
            "count": 1
          },
          {
            "date": "2024-11-04",
            "count": 1
          },
          {
            "date": "2024-11-13",
            "count": 1
          },
          {
            "date": "2024-11-14",
            "count": 1
          },
          {
            "date": "2024-11-19",
            "count": 1
          },
          {
            "date": "2024-11-26",
            "count": 2
          },
          {
            "date": "2024-12-01",
            "count": 1
          },
          {
            "date": "2024-12-05",
            "count": 1
          },
          {
            "date": "2024-12-13",
            "count": 1
          },
          {
            "date": "2024-12-20",
            "count": 1
          },
          {
            "date": "2025-01-04",
            "count": 1
          },
          {
            "date": "2025-01-07",
            "count": 1
          },
          {
            "date": "2025-01-09",
            "count": 1
          },
          {
            "date": "2025-01-28",
            "count": 1
          },
          {
            "date": "2025-02-03",
            "count": 1
          },
          {
            "date": "2025-02-04",
            "count": 1
          },
          {
            "date": "2025-02-07",
            "count": 1
          },
          {
            "date": "2025-02-10",
            "count": 1
          },
          {
            "date": "2025-02-12",
            "count": 1
          },
          {
            "date": "2025-02-14",
            "count": 1
          },
          {
            "date": "2025-02-15",
            "count": 1
          },
          {
            "date": "2025-02-20",
            "count": 2
          },
          {
            "date": "2025-02-21",
            "count": 1
          },
          {
            "date": "2025-02-27",
            "count": 1
          },
          {
            "date": "2025-02-28",
            "count": 1
          },
          {
            "date": "2025-03-06",
            "count": 1
          },
          {
            "date": "2025-03-11",
            "count": 1
          },
          {
            "date": "2025-03-12",
            "count": 1
          },
          {
            "date": "2025-03-13",
            "count": 1
          },
          {
            "date": "2025-03-16",
            "count": 1
          },
          {
            "date": "2025-03-18",
            "count": 2
          },
          {
            "date": "2025-03-24",
            "count": 1
          },
          {
            "date": "2025-03-25",
            "count": 1
          },
          {
            "date": "2025-03-30",
            "count": 1
          },
          {
            "date": "2025-04-02",
            "count": 1
          },
          {
            "date": "2025-04-09",
            "count": 1
          },
          {
            "date": "2025-04-10",
            "count": 1
          },
          {
            "date": "2025-04-12",
            "count": 1
          },
          {
            "date": "2025-04-19",
            "count": 1
          },
          {
            "date": "2025-05-04",
            "count": 1
          },
          {
            "date": "2025-05-20",
            "count": 1
          },
          {
            "date": "2025-05-25",
            "count": 1
          },
          {
            "date": "2025-05-29",
            "count": 1
          },
          {
            "date": "2025-05-31",
            "count": 1
          },
          {
            "date": "2025-06-02",
            "count": 1
          },
          {
            "date": "2025-06-03",
            "count": 1
          },
          {
            "date": "2025-06-04",
            "count": 1
          },
          {
            "date": "2025-06-05",
            "count": 1
          },
          {
            "date": "2025-06-10",
            "count": 2
          },
          {
            "date": "2025-06-12",
            "count": 1
          },
          {
            "date": "2025-06-20",
            "count": 1
          },
          {
            "date": "2025-06-21",
            "count": 1
          },
          {
            "date": "2025-06-23",
            "count": 1
          },
          {
            "date": "2025-07-10",
            "count": 1
          },
          {
            "date": "2025-07-15",
            "count": 2
          },
          {
            "date": "2025-07-17",
            "count": 1
          },
          {
            "date": "2025-08-05",
            "count": 1
          },
          {
            "date": "2025-08-14",
            "count": 1
          },
          {
            "date": "2025-08-15",
            "count": 1
          },
          {
            "date": "2025-08-18",
            "count": 1
          },
          {
            "date": "2025-09-04",
            "count": 1
          },
          {
            "date": "2025-09-12",
            "count": 3
          },
          {
            "date": "2025-09-18",
            "count": 1
          },
          {
            "date": "2025-09-21",
            "count": 1
          },
          {
            "date": "2025-09-23",
            "count": 1
          },
          {
            "date": "2025-09-24",
            "count": 1
          },
          {
            "date": "2025-09-25",
            "count": 1
          },
          {
            "date": "2025-09-30",
            "count": 2
          },
          {
            "date": "2025-10-09",
            "count": 1
          },
          {
            "date": "2025-10-15",
            "count": 1
          },
          {
            "date": "2025-10-16",
            "count": 1
          },
          {
            "date": "2025-10-20",
            "count": 1
          },
          {
            "date": "2025-10-23",
            "count": 1
          },
          {
            "date": "2025-11-07",
            "count": 1
          },
          {
            "date": "2025-11-13",
            "count": 1
          },
          {
            "date": "2025-11-20",
            "count": 1
          },
          {
            "date": "2025-11-24",
            "count": 1
          },
          {
            "date": "2025-12-01",
            "count": 2
          },
          {
            "date": "2025-12-03",
            "count": 2
          },
          {
            "date": "2025-12-09",
            "count": 2
          },
          {
            "date": "2025-12-16",
            "count": 1
          },
          {
            "date": "2025-12-18",
            "count": 1
          },
          {
            "date": "2025-12-27",
            "count": 1
          },
          {
            "date": "2025-12-31",
            "count": 1
          },
          {
            "date": "2026-01-04",
            "count": 1
          },
          {
            "date": "2026-01-05",
            "count": 1
          },
          {
            "date": "2026-01-09",
            "count": 1
          },
          {
            "date": "2026-01-12",
            "count": 1
          },
          {
            "date": "2026-01-17",
            "count": 1
          },
          {
            "date": "2026-01-19",
            "count": 1
          },
          {
            "date": "2026-01-23",
            "count": 1
          },
          {
            "date": "2026-01-30",
            "count": 1
          },
          {
            "date": "2026-02-02",
            "count": 1
          },
          {
            "date": "2026-02-03",
            "count": 1
          },
          {
            "date": "2026-02-08",
            "count": 1
          },
          {
            "date": "2026-02-10",
            "count": 1
          },
          {
            "date": "2026-02-12",
            "count": 1
          },
          {
            "date": "2026-02-13",
            "count": 1
          },
          {
            "date": "2026-02-23",
            "count": 1
          },
          {
            "date": "2026-02-24",
            "count": 1
          },
          {
            "date": "2026-03-03",
            "count": 1
          },
          {
            "date": "2026-03-10",
            "count": 1
          },
          {
            "date": "2026-03-12",
            "count": 1
          },
          {
            "date": "2026-03-16",
            "count": 1
          },
          {
            "date": "2026-03-17",
            "count": 1
          },
          {
            "date": "2026-03-19",
            "count": 1
          },
          {
            "date": "2026-03-21",
            "count": 1
          },
          {
            "date": "2026-03-26",
            "count": 1
          },
          {
            "date": "2026-03-29",
            "count": 1
          },
          {
            "date": "2026-04-06",
            "count": 1
          },
          {
            "date": "2026-04-12",
            "count": 1
          },
          {
            "date": "2026-04-15",
            "count": 1
          },
          {
            "date": "2026-05-05",
            "count": 1
          },
          {
            "date": "2026-05-08",
            "count": 1
          },
          {
            "date": "2026-05-12",
            "count": 1
          },
          {
            "date": "2026-05-16",
            "count": 1
          },
          {
            "date": "2026-05-18",
            "count": 2
          },
          {
            "date": "2026-05-27",
            "count": 1
          },
          {
            "date": "2026-05-28",
            "count": 1
          },
          {
            "date": "2026-05-30",
            "count": 1
          },
          {
            "date": "2026-06-02",
            "count": 1
          },
          {
            "date": "2026-06-03",
            "count": 1
          },
          {
            "date": "2026-06-16",
            "count": 2
          },
          {
            "date": "2026-06-20",
            "count": 1
          },
          {
            "date": "2026-06-24",
            "count": 2
          },
          {
            "date": "2026-06-27",
            "count": 2
          },
          {
            "date": "2026-06-29",
            "count": 1
          },
          {
            "date": "2026-07-05",
            "count": 1
          },
          {
            "date": "2026-07-09",
            "count": 2
          },
          {
            "date": "2026-07-10",
            "count": 1
          }
        ],
        "complete": true,
        "collected": 305,
        "total_stars": 305
      },
      "open_issues_and_prs": 29
    },
    "ai_readiness": {
      "has_nix": false,
      "example_dirs": [
        "notebooks"
      ],
      "has_llms_txt": false,
      "has_dockerfile": false,
      "has_mcp_signal": false,
      "bootstrap_files": [],
      "api_schema_files": [],
      "has_devcontainer": false,
      "typecheck_configs": [],
      "toolchain_manifests": [],
      "largest_source_bytes": 30684,
      "source_files_sampled": 106,
      "oversized_source_files": 0,
      "agent_instruction_files": [],
      "agent_instruction_max_bytes": null
    },
    "dependencies": {
      "manifests": [
        "pyproject.toml"
      ],
      "advisories": {
        "error": null,
        "scope": "repository_graph",
        "source": "osv",
        "findings": [
          {
            "name": "cryptography",
            "direct": false,
            "version": "46.0.3",
            "severity": "critical",
            "ecosystem": "pypi",
            "cvss_score": 9.8,
            "advisory_ids": [
              "GHSA-537c-gmf6-5ccf",
              "GHSA-m959-cc7f-wv43",
              "GHSA-p423-j2cm-9vmq",
              "GHSA-r6ph-v2qm-q3c2",
              "PYSEC-2026-2141",
              "PYSEC-2026-35",
              "PYSEC-2026-36"
            ],
            "fixed_version": "48.0.1",
            "advisory_count": 7,
            "oldest_advisory_days": 160
          },
          {
            "name": "pillow",
            "direct": false,
            "version": "12.1.0",
            "severity": "critical",
            "ecosystem": "pypi",
            "cvss_score": 9.1,
            "advisory_ids": [
              "GHSA-45hq-cxwh-f6vc",
              "GHSA-4x4j-2g7c-83w6",
              "GHSA-5x94-69rx-g8h2",
              "GHSA-5xmw-vc9v-4wf2",
              "GHSA-62p4-gmf7-7g93",
              "GHSA-6r8x-57c9-28j4",
              "GHSA-8v84-f9pq-wr9x",
              "GHSA-9hw9-ch79-4vh6",
              "GHSA-cfh3-3jmp-rvhc",
              "GHSA-fj7v-r99m-22gq"
            ],
            "fixed_version": "12.3.0",
            "advisory_count": 33,
            "oldest_advisory_days": 160
          },
          {
            "name": "click",
            "direct": false,
            "version": "8.3.1",
            "severity": "high",
            "ecosystem": "pypi",
            "cvss_score": 7.2,
            "advisory_ids": [
              "PYSEC-2026-2132"
            ],
            "fixed_version": "8.3.3",
            "advisory_count": 1,
            "oldest_advisory_days": 82
          },
          {
            "name": "protobuf",
            "direct": false,
            "version": "6.33.4",
            "severity": "high",
            "ecosystem": "pypi",
            "cvss_score": 7.5,
            "advisory_ids": [
              "GHSA-7gcm-g887-7qv7",
              "PYSEC-2026-1805"
            ],
            "fixed_version": "6.33.5",
            "advisory_count": 2,
            "oldest_advisory_days": 179
          },
          {
            "name": "pyarrow",
            "direct": false,
            "version": "23.0.0",
            "severity": "high",
            "ecosystem": "pypi",
            "cvss_score": 7,
            "advisory_ids": [
              "GHSA-rgxp-2hwp-jwgg",
              "PYSEC-2026-113"
            ],
            "fixed_version": "23.0.1",
            "advisory_count": 2,
            "oldest_advisory_days": 154
          },
          {
            "name": "soupsieve",
            "direct": false,
            "version": "2.8.3",
            "severity": "high",
            "ecosystem": "pypi",
            "cvss_score": 7.5,
            "advisory_ids": [
              "GHSA-2wc2-fm75-p42x",
              "GHSA-836r-79rf-4m37",
              "PYSEC-2026-3071",
              "PYSEC-2026-3072"
            ],
            "fixed_version": "2.8.4",
            "advisory_count": 4,
            "oldest_advisory_days": 12
          },
          {
            "name": "tornado",
            "direct": false,
            "version": "6.5.4",
            "severity": "high",
            "ecosystem": "pypi",
            "cvss_score": 7.7,
            "advisory_ids": [
              "GHSA-3x9g-8vmp-wqvf",
              "GHSA-78cv-mqj4-43f7",
              "GHSA-cx3h-4qpv-8hc9",
              "GHSA-fqwm-6jpj-5wxc",
              "GHSA-mgf9-4vpg-hj56",
              "GHSA-pw6j-qg29-8w7f",
              "GHSA-qjxf-f2mg-c6mc",
              "PYSEC-2026-140",
              "PYSEC-2026-2287",
              "PYSEC-2026-3387"
            ],
            "fixed_version": "6.5.7",
            "advisory_count": 12,
            "oldest_advisory_days": 132
          },
          {
            "name": "urllib3",
            "direct": false,
            "version": "2.6.3",
            "severity": "high",
            "ecosystem": "pypi",
            "cvss_score": 7.5,
            "advisory_ids": [
              "GHSA-mf9v-mfxr-j63j",
              "GHSA-qccp-gfcp-xxvc",
              "PYSEC-2026-141",
              "PYSEC-2026-142"
            ],
            "fixed_version": "2.7.0",
            "advisory_count": 4,
            "oldest_advisory_days": 71
          },
          {
            "name": "idna",
            "direct": false,
            "version": "3.11",
            "severity": "moderate",
            "ecosystem": "pypi",
            "cvss_score": 5.3,
            "advisory_ids": [
              "GHSA-65pc-fj4g-8rjx",
              "PYSEC-2026-215"
            ],
            "fixed_version": "3.15",
            "advisory_count": 2,
            "oldest_advisory_days": 63
          },
          {
            "name": "pytest",
            "direct": false,
            "version": "9.0.2",
            "severity": "moderate",
            "ecosystem": "pypi",
            "cvss_score": 6.8,
            "advisory_ids": [
              "GHSA-6w46-j5rx-g56g",
              "PYSEC-2026-1845"
            ],
            "fixed_version": "9.0.3",
            "advisory_count": 2,
            "oldest_advisory_days": 180
          },
          {
            "name": "requests",
            "direct": false,
            "version": "2.32.5",
            "severity": "moderate",
            "ecosystem": "pypi",
            "cvss_score": 5.5,
            "advisory_ids": [
              "GHSA-gc5v-m9x4-r6x2",
              "PYSEC-2026-2275"
            ],
            "fixed_version": "2.33.0",
            "advisory_count": 2,
            "oldest_advisory_days": 118
          },
          {
            "name": "setuptools",
            "direct": false,
            "version": "80.10.1",
            "severity": "moderate",
            "ecosystem": "pypi",
            "cvss_score": 6.1,
            "advisory_ids": [
              "GHSA-h35f-9h28-mq5c",
              "PYSEC-2026-3447"
            ],
            "fixed_version": "83.0.0",
            "advisory_count": 2,
            "oldest_advisory_days": 13
          },
          {
            "name": "pygments",
            "direct": false,
            "version": "2.19.2",
            "severity": "low",
            "ecosystem": "pypi",
            "cvss_score": 3.3,
            "advisory_ids": [
              "GHSA-5239-wwwm-4pmq",
              "PYSEC-2026-2987"
            ],
            "fixed_version": "2.20.0",
            "advisory_count": 2,
            "oldest_advisory_days": 121
          }
        ],
        "collected": true,
        "truncated": false,
        "by_severity": {
          "low": 1,
          "high": 6,
          "critical": 2,
          "moderate": 4
        },
        "advisory_count": 75,
        "affected_count": 13,
        "assessed_count": 204,
        "assessed_package": null,
        "unassessed_count": 0,
        "direct_affected_count": 0
      },
      "ecosystems": [
        "pypi"
      ],
      "dependencies": [
        {
          "name": "anndata",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": ">=0.7.4"
        },
        {
          "name": "mudata",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": null
        },
        {
          "name": "scanpy",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": null
        },
        {
          "name": "numba",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": null
        },
        {
          "name": "tqdm",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": ">=4.0"
        },
        {
          "name": "docrep",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": ">=0.3.1"
        },
        {
          "name": "plotnine",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": ">=0.10.1"
        },
        {
          "name": "session-info2",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": null
        },
        {
          "name": "pandas",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": "<3"
        }
      ],
      "all_dependencies": {
        "error": null,
        "source": "github-sbom",
        "packages": [
          {
            "name": "anndata",
            "direct": true,
            "version": "0.11.4",
            "ecosystem": "pypi"
          },
          {
            "name": "anndata",
            "direct": true,
            "version": "0.12.7",
            "ecosystem": "pypi"
          },
          {
            "name": "docrep",
            "direct": true,
            "version": "0.3.2",
            "ecosystem": "pypi"
          },
          {
            "name": "mudata",
            "direct": true,
            "version": "0.3.2",
            "ecosystem": "pypi"
          },
          {
            "name": "numba",
            "direct": true,
            "version": "0.63.1",
            "ecosystem": "pypi"
          },
          {
            "name": "pandas",
            "direct": true,
            "version": "2.3.3",
            "ecosystem": "pypi"
          },
          {
            "name": "plotnine",
            "direct": true,
            "version": "0.15.2",
            "ecosystem": "pypi"
          },
          {
            "name": "scanpy",
            "direct": true,
            "version": "1.11.5",
            "ecosystem": "pypi"
          },
          {
            "name": "scanpy",
            "direct": true,
            "version": "1.12",
            "ecosystem": "pypi"
          },
          {
            "name": "session-info2",
            "direct": true,
            "version": "0.3",
            "ecosystem": "pypi"
          },
          {
            "name": "tqdm",
            "direct": true,
            "version": "4.67.1",
            "ecosystem": "pypi"
          },
          {
            "name": "accessible-pygments",
            "direct": false,
            "version": "0.0.5",
            "ecosystem": "pypi"
          },
          {
            "name": "adjusttext",
            "direct": false,
            "version": "1.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "alabaster",
            "direct": false,
            "version": "1.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "appnope",
            "direct": false,
            "version": "0.1.4",
            "ecosystem": "pypi"
          },
          {
            "name": "array-api-compat",
            "direct": false,
            "version": "1.13.0",
            "ecosystem": "pypi"
          },
          {
            "name": "asttokens",
            "direct": false,
            "version": "3.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "attrs",
            "direct": false,
            "version": "25.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "babel",
            "direct": false,
            "version": "2.17.0",
            "ecosystem": "pypi"
          },
          {
            "name": "backports-tarfile",
            "direct": false,
            "version": "1.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "beautifulsoup4",
            "direct": false,
            "version": "4.14.3",
            "ecosystem": "pypi"
          },
          {
            "name": "bump2version",
            "direct": false,
            "version": "1.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "bumpversion",
            "direct": false,
            "version": "0.6.0",
            "ecosystem": "pypi"
          },
          {
            "name": "cell2cell",
            "direct": false,
            "version": "0.8.4",
            "ecosystem": "pypi"
          },
          {
            "name": "certifi",
            "direct": false,
            "version": "2026.1.4",
            "ecosystem": "pypi"
          },
          {
            "name": "cffi",
            "direct": false,
            "version": "2.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "cfgv",
            "direct": false,
            "version": "3.5.0",
            "ecosystem": "pypi"
          },
          {
            "name": "charset-normalizer",
            "direct": false,
            "version": "3.4.4",
            "ecosystem": "pypi"
          },
          {
            "name": "click",
            "direct": false,
            "version": "8.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "colorama",
            "direct": false,
            "version": "0.4.6",
            "ecosystem": "pypi"
          },
          {
            "name": "comm",
            "direct": false,
            "version": "0.2.3",
            "ecosystem": "pypi"
          },
          {
            "name": "contourpy",
            "direct": false,
            "version": "1.3.2",
            "ecosystem": "pypi"
          },
          {
            "name": "contourpy",
            "direct": false,
            "version": "1.3.3",
            "ecosystem": "pypi"
          },
          {
            "name": "corneto",
            "direct": false,
            "version": "0.9.1a6",
            "ecosystem": "pypi"
          },
          {
            "name": "coverage",
            "direct": false,
            "version": "7.13.1",
            "ecosystem": "pypi"
          },
          {
            "name": "cryptography",
            "direct": false,
            "version": "46.0.3",
            "ecosystem": "pypi"
          },
          {
            "name": "cvxpy-base",
            "direct": false,
            "version": "1.7.5",
            "ecosystem": "pypi"
          },
          {
            "name": "cycler",
            "direct": false,
            "version": "0.12.1",
            "ecosystem": "pypi"
          },
          {
            "name": "debugpy",
            "direct": false,
            "version": "1.8.19",
            "ecosystem": "pypi"
          },
          {
            "name": "decorator",
            "direct": false,
            "version": "5.2.1",
            "ecosystem": "pypi"
          },
          {
            "name": "decoupler",
            "direct": false,
            "version": "2.1.4",
            "ecosystem": "pypi"
          },
          {
            "name": "distlib",
            "direct": false,
            "version": "0.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "docutils",
            "direct": false,
            "version": "0.21.2",
            "ecosystem": "pypi"
          },
          {
            "name": "donfig",
            "direct": false,
            "version": "0.8.1.post1",
            "ecosystem": "pypi"
          },
          {
            "name": "et-xmlfile",
            "direct": false,
            "version": "2.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "exceptiongroup",
            "direct": false,
            "version": "1.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "executing",
            "direct": false,
            "version": "2.2.1",
            "ecosystem": "pypi"
          },
          {
            "name": "fast-array-utils",
            "direct": false,
            "version": "1.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "fastjsonschema",
            "direct": false,
            "version": "2.21.2",
            "ecosystem": "pypi"
          },
          {
            "name": "filelock",
            "direct": false,
            "version": "3.20.3",
            "ecosystem": "pypi"
          },
          {
            "name": "fonttools",
            "direct": false,
            "version": "4.61.1",
            "ecosystem": "pypi"
          },
          {
            "name": "formulaic",
            "direct": false,
            "version": "1.2.1",
            "ecosystem": "pypi"
          },
          {
            "name": "formulaic-contrasts",
            "direct": false,
            "version": "1.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "google-crc32c",
            "direct": false,
            "version": "1.8.0",
            "ecosystem": "pypi"
          },
          {
            "name": "greenlet",
            "direct": false,
            "version": "3.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "gseapy",
            "direct": false,
            "version": "1.1.11",
            "ecosystem": "pypi"
          },
          {
            "name": "h5py",
            "direct": false,
            "version": "3.15.1",
            "ecosystem": "pypi"
          },
          {
            "name": "highspy",
            "direct": false,
            "version": "1.12.0",
            "ecosystem": "pypi"
          },
          {
            "name": "id",
            "direct": false,
            "version": "1.5.0",
            "ecosystem": "pypi"
          },
          {
            "name": "identify",
            "direct": false,
            "version": "2.6.16",
            "ecosystem": "pypi"
          },
          {
            "name": "idna",
            "direct": false,
            "version": "3.11",
            "ecosystem": "pypi"
          },
          {
            "name": "imagesize",
            "direct": false,
            "version": "1.4.1",
            "ecosystem": "pypi"
          },
          {
            "name": "importlib-metadata",
            "direct": false,
            "version": "8.7.1",
            "ecosystem": "pypi"
          },
          {
            "name": "inflect",
            "direct": false,
            "version": "7.5.0",
            "ecosystem": "pypi"
          },
          {
            "name": "iniconfig",
            "direct": false,
            "version": "2.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "interface-meta",
            "direct": false,
            "version": "1.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "ipykernel",
            "direct": false,
            "version": "7.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "ipython",
            "direct": false,
            "version": "8.38.0",
            "ecosystem": "pypi"
          },
          {
            "name": "ipython",
            "direct": false,
            "version": "9.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "ipython-pygments-lexers",
            "direct": false,
            "version": "1.1.1",
            "ecosystem": "pypi"
          },
          {
            "name": "jaraco-classes",
            "direct": false,
            "version": "3.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jaraco-context",
            "direct": false,
            "version": "6.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jaraco-functools",
            "direct": false,
            "version": "4.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jedi",
            "direct": false,
            "version": "0.19.2",
            "ecosystem": "pypi"
          },
          {
            "name": "jeepney",
            "direct": false,
            "version": "0.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jinja2",
            "direct": false,
            "version": "3.1.6",
            "ecosystem": "pypi"
          },
          {
            "name": "joblib",
            "direct": false,
            "version": "1.5.3",
            "ecosystem": "pypi"
          },
          {
            "name": "jsonschema",
            "direct": false,
            "version": "4.26.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jsonschema-specifications",
            "direct": false,
            "version": "2025.9.1",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyter-cache",
            "direct": false,
            "version": "1.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyter-client",
            "direct": false,
            "version": "8.8.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyter-core",
            "direct": false,
            "version": "5.9.1",
            "ecosystem": "pypi"
          },
          {
            "name": "keyring",
            "direct": false,
            "version": "25.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "kiwisolver",
            "direct": false,
            "version": "1.4.9",
            "ecosystem": "pypi"
          },
          {
            "name": "kneed",
            "direct": false,
            "version": "0.8.5",
            "ecosystem": "pypi"
          },
          {
            "name": "latexcodec",
            "direct": false,
            "version": "3.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "legacy-api-wrap",
            "direct": false,
            "version": "1.5",
            "ecosystem": "pypi"
          },
          {
            "name": "legendkit",
            "direct": false,
            "version": "0.3.6",
            "ecosystem": "pypi"
          },
          {
            "name": "liana",
            "direct": false,
            "version": "1.7.1",
            "ecosystem": "pypi"
          },
          {
            "name": "llvmlite",
            "direct": false,
            "version": "0.46.0",
            "ecosystem": "pypi"
          },
          {
            "name": "markdown-it-py",
            "direct": false,
            "version": "3.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "markdown-it-py",
            "direct": false,
            "version": "4.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "markupsafe",
            "direct": false,
            "version": "3.0.3",
            "ecosystem": "pypi"
          },
          {
            "name": "marsilea",
            "direct": false,
            "version": "0.5.7",
            "ecosystem": "pypi"
          },
          {
            "name": "matplotlib",
            "direct": false,
            "version": "3.10.8",
            "ecosystem": "pypi"
          },
          {
            "name": "matplotlib-inline",
            "direct": false,
            "version": "0.2.1",
            "ecosystem": "pypi"
          },
          {
            "name": "mdit-py-plugins",
            "direct": false,
            "version": "0.5.0",
            "ecosystem": "pypi"
          },
          {
            "name": "mdurl",
            "direct": false,
            "version": "0.1.2",
            "ecosystem": "pypi"
          },
          {
            "name": "mizani",
            "direct": false,
            "version": "0.14.3",
            "ecosystem": "pypi"
          },
          {
            "name": "mofapy2",
            "direct": false,
            "version": "0.7.3",
            "ecosystem": "pypi"
          },
          {
            "name": "mofax",
            "direct": false,
            "version": "0.3.7",
            "ecosystem": "pypi"
          },
          {
            "name": "more-itertools",
            "direct": false,
            "version": "10.8.0",
            "ecosystem": "pypi"
          },
          {
            "name": "muon",
            "direct": false,
            "version": "0.1.7",
            "ecosystem": "pypi"
          },
          {
            "name": "myst-nb",
            "direct": false,
            "version": "1.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "myst-parser",
            "direct": false,
            "version": "4.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "myst-parser",
            "direct": false,
            "version": "5.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "narwhals",
            "direct": false,
            "version": "2.15.0",
            "ecosystem": "pypi"
          },
          {
            "name": "natsort",
            "direct": false,
            "version": "8.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "nbclient",
            "direct": false,
            "version": "0.10.4",
            "ecosystem": "pypi"
          },
          {
            "name": "nbformat",
            "direct": false,
            "version": "5.10.4",
            "ecosystem": "pypi"
          },
          {
            "name": "nest-asyncio",
            "direct": false,
            "version": "1.6.0",
            "ecosystem": "pypi"
          },
          {
            "name": "networkx",
            "direct": false,
            "version": "3.4.2",
            "ecosystem": "pypi"
          },
          {
            "name": "networkx",
            "direct": false,
            "version": "3.6.1",
            "ecosystem": "pypi"
          },
          {
            "name": "nh3",
            "direct": false,
            "version": "0.3.2",
            "ecosystem": "pypi"
          },
          {
            "name": "nodeenv",
            "direct": false,
            "version": "1.10.0",
            "ecosystem": "pypi"
          },
          {
            "name": "numcodecs",
            "direct": false,
            "version": "0.16.5",
            "ecosystem": "pypi"
          },
          {
            "name": "numpy",
            "direct": false,
            "version": "2.2.6",
            "ecosystem": "pypi"
          },
          {
            "name": "numpy",
            "direct": false,
            "version": "2.3.5",
            "ecosystem": "pypi"
          },
          {
            "name": "omnipath",
            "direct": false,
            "version": "1.0.12",
            "ecosystem": "pypi"
          },
          {
            "name": "openpyxl",
            "direct": false,
            "version": "3.1.5",
            "ecosystem": "pypi"
          },
          {
            "name": "packaging",
            "direct": false,
            "version": "26.0",
            "ecosystem": "pypi"
          },
          {
            "name": "parso",
            "direct": false,
            "version": "0.8.5",
            "ecosystem": "pypi"
          },
          {
            "name": "patsy",
            "direct": false,
            "version": "1.0.2",
            "ecosystem": "pypi"
          },
          {
            "name": "pexpect",
            "direct": false,
            "version": "4.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pillow",
            "direct": false,
            "version": "12.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "platformdirs",
            "direct": false,
            "version": "4.5.1",
            "ecosystem": "pypi"
          },
          {
            "name": "pluggy",
            "direct": false,
            "version": "1.6.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pre-commit",
            "direct": false,
            "version": "4.5.1",
            "ecosystem": "pypi"
          },
          {
            "name": "prompt-toolkit",
            "direct": false,
            "version": "3.0.52",
            "ecosystem": "pypi"
          },
          {
            "name": "protobuf",
            "direct": false,
            "version": "6.33.4",
            "ecosystem": "pypi"
          },
          {
            "name": "psutil",
            "direct": false,
            "version": "7.2.1",
            "ecosystem": "pypi"
          },
          {
            "name": "ptyprocess",
            "direct": false,
            "version": "0.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pure-eval",
            "direct": false,
            "version": "0.2.3",
            "ecosystem": "pypi"
          },
          {
            "name": "pyarrow",
            "direct": false,
            "version": "23.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pybtex",
            "direct": false,
            "version": "0.25.1",
            "ecosystem": "pypi"
          },
          {
            "name": "pybtex-docutils",
            "direct": false,
            "version": "1.0.3",
            "ecosystem": "pypi"
          },
          {
            "name": "pycparser",
            "direct": false,
            "version": "3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pydata-sphinx-theme",
            "direct": false,
            "version": "0.15.4",
            "ecosystem": "pypi"
          },
          {
            "name": "pydeseq2",
            "direct": false,
            "version": "0.5.2",
            "ecosystem": "pypi"
          },
          {
            "name": "pydeseq2",
            "direct": false,
            "version": "0.5.4",
            "ecosystem": "pypi"
          },
          {
            "name": "pygments",
            "direct": false,
            "version": "2.19.2",
            "ecosystem": "pypi"
          },
          {
            "name": "pynndescent",
            "direct": false,
            "version": "0.6.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pyparsing",
            "direct": false,
            "version": "3.3.2",
            "ecosystem": "pypi"
          },
          {
            "name": "pyscipopt",
            "direct": false,
            "version": "5.7.1",
            "ecosystem": "pypi"
          },
          {
            "name": "pytest",
            "direct": false,
            "version": "9.0.2",
            "ecosystem": "pypi"
          },
          {
            "name": "python-dateutil",
            "direct": false,
            "version": "2.9.0.post0",
            "ecosystem": "pypi"
          },
          {
            "name": "pytz",
            "direct": false,
            "version": "2025.2",
            "ecosystem": "pypi"
          },
          {
            "name": "pywin32-ctypes",
            "direct": false,
            "version": "0.2.3",
            "ecosystem": "pypi"
          },
          {
            "name": "pyyaml",
            "direct": false,
            "version": "6.0.3",
            "ecosystem": "pypi"
          },
          {
            "name": "pyzmq",
            "direct": false,
            "version": "27.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "readme-renderer",
            "direct": false,
            "version": "44.0",
            "ecosystem": "pypi"
          },
          {
            "name": "referencing",
            "direct": false,
            "version": "0.37.0",
            "ecosystem": "pypi"
          },
          {
            "name": "requests",
            "direct": false,
            "version": "2.32.5",
            "ecosystem": "pypi"
          },
          {
            "name": "requests-toolbelt",
            "direct": false,
            "version": "1.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "rfc3986",
            "direct": false,
            "version": "2.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "rich",
            "direct": false,
            "version": "14.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "rpds-py",
            "direct": false,
            "version": "0.30.0",
            "ecosystem": "pypi"
          },
          {
            "name": "scikit-learn",
            "direct": false,
            "version": "1.7.2",
            "ecosystem": "pypi"
          },
          {
            "name": "scikit-learn",
            "direct": false,
            "version": "1.8.0",
            "ecosystem": "pypi"
          },
          {
            "name": "scipy",
            "direct": false,
            "version": "1.15.3",
            "ecosystem": "pypi"
          },
          {
            "name": "scipy",
            "direct": false,
            "version": "1.17.0",
            "ecosystem": "pypi"
          },
          {
            "name": "seaborn",
            "direct": false,
            "version": "0.13.2",
            "ecosystem": "pypi"
          },
          {
            "name": "secretstorage",
            "direct": false,
            "version": "3.5.0",
            "ecosystem": "pypi"
          },
          {
            "name": "session-info",
            "direct": false,
            "version": "1.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "setuptools",
            "direct": false,
            "version": "80.10.1",
            "ecosystem": "pypi"
          },
          {
            "name": "six",
            "direct": false,
            "version": "1.17.0",
            "ecosystem": "pypi"
          },
          {
            "name": "snowballstemmer",
            "direct": false,
            "version": "3.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "soupsieve",
            "direct": false,
            "version": "2.8.3",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinx",
            "direct": false,
            "version": "8.1.3",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinx-autodoc-typehints",
            "direct": false,
            "version": "3.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinx-book-theme",
            "direct": false,
            "version": "1.1.4",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinx-copybutton",
            "direct": false,
            "version": "0.5.2",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinx-tabs",
            "direct": false,
            "version": "3.4.7",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinxcontrib-applehelp",
            "direct": false,
            "version": "2.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinxcontrib-bibtex",
            "direct": false,
            "version": "2.6.5",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinxcontrib-devhelp",
            "direct": false,
            "version": "2.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinxcontrib-htmlhelp",
            "direct": false,
            "version": "2.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinxcontrib-jsmath",
            "direct": false,
            "version": "1.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinxcontrib-qthelp",
            "direct": false,
            "version": "2.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinxcontrib-serializinghtml",
            "direct": false,
            "version": "2.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "sphinxext-opengraph",
            "direct": false,
            "version": "0.13.0",
            "ecosystem": "pypi"
          },
          {
            "name": "sqlalchemy",
            "direct": false,
            "version": "2.0.46",
            "ecosystem": "pypi"
          },
          {
            "name": "stack-data",
            "direct": false,
            "version": "0.6.3",
            "ecosystem": "pypi"
          },
          {
            "name": "statannotations",
            "direct": false,
            "version": "0.7.2",
            "ecosystem": "pypi"
          },
          {
            "name": "statsmodels",
            "direct": false,
            "version": "0.14.6",
            "ecosystem": "pypi"
          },
          {
            "name": "stdlib-list",
            "direct": false,
            "version": "0.12.0",
            "ecosystem": "pypi"
          },
          {
            "name": "tabulate",
            "direct": false,
            "version": "0.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "tensorly",
            "direct": false,
            "version": "0.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "threadpoolctl",
            "direct": false,
            "version": "3.6.0",
            "ecosystem": "pypi"
          },
          {
            "name": "tomli",
            "direct": false,
            "version": "2.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "tornado",
            "direct": false,
            "version": "6.5.4",
            "ecosystem": "pypi"
          },
          {
            "name": "traitlets",
            "direct": false,
            "version": "5.14.3",
            "ecosystem": "pypi"
          },
          {
            "name": "twine",
            "direct": false,
            "version": "6.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "typeguard",
            "direct": false,
            "version": "4.4.4",
            "ecosystem": "pypi"
          },
          {
            "name": "typing-extensions",
            "direct": false,
            "version": "4.15.0",
            "ecosystem": "pypi"
          },
          {
            "name": "tzdata",
            "direct": false,
            "version": "2025.3",
            "ecosystem": "pypi"
          },
          {
            "name": "umap-learn",
            "direct": false,
            "version": "0.5.11",
            "ecosystem": "pypi"
          },
          {
            "name": "urllib3",
            "direct": false,
            "version": "2.6.3",
            "ecosystem": "pypi"
          },
          {
            "name": "virtualenv",
            "direct": false,
            "version": "20.36.1",
            "ecosystem": "pypi"
          },
          {
            "name": "wcwidth",
            "direct": false,
            "version": "0.3.2",
            "ecosystem": "pypi"
          },
          {
            "name": "wrapt",
            "direct": false,
            "version": "2.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "xlrd",
            "direct": false,
            "version": "2.0.2",
            "ecosystem": "pypi"
          },
          {
            "name": "zarr",
            "direct": false,
            "version": "3.1.5",
            "ecosystem": "pypi"
          },
          {
            "name": "zipp",
            "direct": false,
            "version": "3.23.0",
            "ecosystem": "pypi"
          }
        ],
        "collected": true,
        "truncated": false,
        "total_count": 204,
        "direct_count": 11,
        "indirect_count": 193
      }
    },
    "maintainership": {
      "issues": {
        "open_prs": 2,
        "merged_prs": 46,
        "open_issues": 27,
        "closed_ratio": 0.85,
        "closed_issues": 153,
        "closed_unmerged_prs": 18
      },
      "bus_factor": 1,
      "bot_contributors": 1,
      "top_contributors": [
        {
          "type": "User",
          "login": "dbdimitrov",
          "commits": 180,
          "avatar_url": "https://avatars.githubusercontent.com/u/50865230?v=4"
        },
        {
          "type": "User",
          "login": "npalacioescat",
          "commits": 61,
          "avatar_url": "https://avatars.githubusercontent.com/u/22887412?v=4"
        },
        {
          "type": "User",
          "login": "pablormier",
          "commits": 10,
          "avatar_url": "https://avatars.githubusercontent.com/u/1433810?v=4"
        },
        {
          "type": "User",
          "login": "AtheerAS",
          "commits": 8,
          "avatar_url": "https://avatars.githubusercontent.com/u/89348482?v=4"
        },
        {
          "type": "User",
          "login": "robinfallegger",
          "commits": 7,
          "avatar_url": "https://avatars.githubusercontent.com/u/10638014?v=4"
        },
        {
          "type": "User",
          "login": "demian1",
          "commits": 7,
          "avatar_url": "https://avatars.githubusercontent.com/u/186915569?v=4"
        },
        {
          "type": "User",
          "login": "fbnrst",
          "commits": 6,
          "avatar_url": "https://avatars.githubusercontent.com/u/7300030?v=4"
        },
        {
          "type": "User",
          "login": "PauBadiaM",
          "commits": 6,
          "avatar_url": "https://avatars.githubusercontent.com/u/44896790?v=4"
        },
        {
          "type": "User",
          "login": "psl-schaefer",
          "commits": 3,
          "avatar_url": "https://avatars.githubusercontent.com/u/62442385?v=4"
        },
        {
          "type": "User",
          "login": "deeenes",
          "commits": 2,
          "avatar_url": "https://avatars.githubusercontent.com/u/2679889?v=4"
        }
      ],
      "contributors_sampled": 16,
      "top_contributor_share": 0.608
    },
    "quality_signals": {
      "has_ci": true,
      "has_tests": true,
      "ci_workflows": [
        "build.yaml",
        "release.yaml",
        "test.yml"
      ],
      "has_docs_dir": true,
      "linter_configs": [],
      "has_editorconfig": false,
      "has_linter_config": true,
      "has_precommit_config": true
    },
    "security_signals": {
      "lockfiles": [
        "uv.lock"
      ],
      "scorecard": {
        "checks": [
          {
            "name": "Binary-Artifacts",
            "score": 10,
            "reason": "no binaries found in the repo",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#binary-artifacts"
          },
          {
            "name": "Branch-Protection",
            "score": null,
            "reason": "internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#branch-protection"
          },
          {
            "name": "CI-Tests",
            "score": 10,
            "reason": "4 out of 4 merged PRs checked by a CI test -- score normalized to 10",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#ci-tests"
          },
          {
            "name": "CII-Best-Practices",
            "score": 0,
            "reason": "no effort to earn an OpenSSF best practices badge detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#cii-best-practices"
          },
          {
            "name": "Code-Review",
            "score": 2,
            "reason": "Found 2/7 approved changesets -- score normalized to 2",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#code-review"
          },
          {
            "name": "Contributors",
            "score": 10,
            "reason": "project has 15 contributing companies or organizations",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#contributors"
          },
          {
            "name": "Dangerous-Workflow",
            "score": 10,
            "reason": "no dangerous workflow patterns detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dangerous-workflow"
          },
          {
            "name": "Dependency-Update-Tool",
            "score": 0,
            "reason": "no update tool detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dependency-update-tool"
          },
          {
            "name": "Fuzzing",
            "score": 0,
            "reason": "project is not fuzzed",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#fuzzing"
          },
          {
            "name": "License",
            "score": 10,
            "reason": "license file detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#license"
          },
          {
            "name": "Maintained",
            "score": 10,
            "reason": "30 commit(s) and 7 issue activity found in the last 90 days -- score normalized to 10",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#maintained"
          },
          {
            "name": "Packaging",
            "score": 10,
            "reason": "packaging workflow detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#packaging"
          },
          {
            "name": "Pinned-Dependencies",
            "score": 0,
            "reason": "dependency not pinned by hash detected -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#pinned-dependencies"
          },
          {
            "name": "SAST",
            "score": 0,
            "reason": "SAST tool is not run on all commits -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#sast"
          },
          {
            "name": "Security-Policy",
            "score": 0,
            "reason": "security policy file not detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#security-policy"
          },
          {
            "name": "Signed-Releases",
            "score": null,
            "reason": "no releases found",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#signed-releases"
          },
          {
            "name": "Token-Permissions",
            "score": 0,
            "reason": "detected GitHub workflow tokens with excessive permissions",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#token-permissions"
          },
          {
            "name": "Vulnerabilities",
            "score": 0,
            "reason": "41 existing vulnerabilities detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#vulnerabilities"
          }
        ],
        "commit": "705bcf9dd9faa2257fee30e624a9690d0ddb932f",
        "ran_at": "2026-07-21T21:22:03Z",
        "aggregate_score": 4.3,
        "scorecard_version": "v5.5.0"
      },
      "has_codeql_workflow": false,
      "has_security_policy": false,
      "has_dependabot_config": false
    }
  },
  "config": {
    "disabled_metrics": [],
    "disabled_categories": [],
    "disabled_components": {}
  },
  "source": {
    "url": "https://github.com/saezlab/liana-py",
    "host": "github.com",
    "name": "liana-py",
    "owner": "saezlab"
  },
  "metrics": {
    "overall": {
      "key": "overall",
      "band": "good",
      "name": "Overall health",
      "note": null,
      "notes": [],
      "value": 74,
      "inputs": {
        "security": 54,
        "vitality": 84,
        "community": 61,
        "governance": 68,
        "engineering": 96
      },
      "components": []
    },
    "categories": [
      {
        "key": "vitality",
        "band": "good",
        "name": "Vitality",
        "value": 84,
        "weight": 0.22,
        "metrics": [
          {
            "key": "development_activity",
            "band": "good",
            "name": "Development activity",
            "note": null,
            "notes": [],
            "value": 79,
            "inputs": {
              "commits_last_year": 181,
              "human_commit_share": 0.97,
              "days_since_last_push": 5,
              "active_weeks_last_year": 22
            },
            "components": [
              {
                "key": "push_recency",
                "name": "Push recency",
                "detail": "last push 5 days ago",
                "points": 36,
                "status": "met",
                "details": [
                  {
                    "code": "push_recency",
                    "params": {
                      "days": 5
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_cadence",
                "name": "Commit cadence",
                "detail": "22/52 weeks with commits",
                "points": 15.2,
                "status": "partial",
                "details": [
                  {
                    "code": "commit_cadence_weeks",
                    "params": {
                      "weeks": 22
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_volume",
                "name": "Commit volume",
                "detail": "181 commits in the last year",
                "points": 18,
                "status": "met",
                "details": [
                  {
                    "code": "commits_last_year",
                    "params": {
                      "count": 181
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "openssf_scorecard_maintained",
                "name": "OpenSSF Scorecard: Maintained",
                "detail": "30 commit(s) and 7 issue activity found in the last 90 days -- score normalized to 10",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "release_discipline",
            "band": "excellent",
            "name": "Release discipline",
            "note": "Excluded from scoring (no data or not applicable): OpenSSF Scorecard: Signed-Releases. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "openssf_scorecard_signed_releases"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 92,
            "inputs": {
              "releases_count": 24,
              "latest_release_tag": "v1.8.1",
              "releases_from_tags": false,
              "days_since_latest_release": 5,
              "mean_days_between_releases": 60.5
            },
            "components": [
              {
                "key": "ships_releases",
                "name": "Ships releases",
                "detail": "24 releases published",
                "points": 27,
                "status": "met",
                "details": [
                  {
                    "code": "releases_published",
                    "params": {
                      "count": 24
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "release_recency",
                "name": "Release recency",
                "detail": "latest release 5 days ago",
                "points": 36,
                "status": "met",
                "details": [
                  {
                    "code": "release_recency",
                    "params": {
                      "days": 5
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "release_cadence",
                "name": "Release cadence",
                "detail": "a release every ~60.5 days",
                "points": 19.8,
                "status": "partial",
                "details": [
                  {
                    "code": "release_cadence",
                    "params": {
                      "gap": 60.5
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "openssf_scorecard_signed_releases",
                "name": "OpenSSF Scorecard: Signed-Releases",
                "detail": "no releases found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              }
            ]
          },
          {
            "key": "abandonment",
            "band": "excellent",
            "name": "Abandonment",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "cap": null,
              "state": "maintained",
              "guards": [],
              "signals": [],
              "red_flag": false,
              "multiplier_pct": 100,
              "declared_reason": null,
              "unverified_reason": null,
              "unanswered_open_prs": null,
              "unanswered_open_issues": null,
              "days_since_last_merged_pr": null,
              "days_since_last_human_commit": 5,
              "days_since_last_human_commit_is_floor": false
            },
            "components": [
              {
                "key": "project_is_still_maintained",
                "name": "Project is still maintained",
                "detail": "last human commit 5 days ago",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "abandonment_maintained",
                    "params": {
                      "days": 5
                    }
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Is the project alive — is code being written and are releases shipping?"
      },
      {
        "key": "community",
        "band": "moderate",
        "name": "Community & Adoption",
        "value": 61,
        "weight": 0.18,
        "metrics": [
          {
            "key": "popularity",
            "band": "moderate",
            "name": "Popularity & adoption",
            "note": null,
            "notes": [],
            "value": 53,
            "inputs": {
              "forks": 34,
              "stars": 305,
              "watchers": 1,
              "growth_state": "organic",
              "growth_factor_pct": 100
            },
            "components": [
              {
                "key": "stars",
                "name": "Stars",
                "detail": "305 stars",
                "points": 40.3,
                "status": "partial",
                "details": [
                  {
                    "code": "stars",
                    "params": {
                      "count": 305
                    }
                  }
                ],
                "max_points": 60
              },
              {
                "key": "forks",
                "name": "Forks",
                "detail": "34 forks",
                "points": 12.7,
                "status": "partial",
                "details": [
                  {
                    "code": "forks",
                    "params": {
                      "count": 34
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "watchers",
                "name": "Watchers",
                "detail": "1 watchers",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "watchers",
                    "params": {
                      "count": 1
                    }
                  }
                ],
                "max_points": 15
              }
            ]
          },
          {
            "key": "community_health",
            "band": "good",
            "name": "Community health",
            "note": null,
            "notes": [],
            "value": 70,
            "inputs": {
              "has_readme": true,
              "has_license": true,
              "has_contributing": true,
              "has_issue_template": false,
              "has_code_of_conduct": false,
              "has_pull_request_template": false
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 22.5,
                "status": "met",
                "details": [],
                "max_points": 22.5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "recognized license (BSD-3-Clause)",
                "points": 22.5,
                "status": "met",
                "details": [
                  {
                    "code": "license_standard",
                    "params": {}
                  },
                  {
                    "code": "license_spdx",
                    "params": {
                      "spdx": "BSD-3-Clause"
                    }
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributing_guide",
                "name": "CONTRIBUTING guide",
                "detail": null,
                "points": 18,
                "status": "met",
                "details": [],
                "max_points": 18
              },
              {
                "key": "code_of_conduct",
                "name": "Code of conduct",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 13.5
              },
              {
                "key": "issue_template",
                "name": "Issue template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.2
              },
              {
                "key": "pr_template",
                "name": "PR template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.3
              }
            ]
          }
        ],
        "description": "Does the project have users, downloads, attention, and a welcoming setup for contributors?"
      },
      {
        "key": "governance",
        "band": "moderate",
        "name": "Sustainability & Governance",
        "value": 68,
        "weight": 0.24,
        "metrics": [
          {
            "key": "maintainer_resilience",
            "band": "at_risk",
            "name": "Maintainer resilience (bus factor)",
            "note": null,
            "notes": [],
            "value": 41,
            "inputs": {
              "bus_factor": 1,
              "contributors_sampled": 16,
              "top_contributor_share": 0.608
            },
            "components": [
              {
                "key": "bus_factor",
                "name": "Bus factor",
                "detail": "1 contributor(s) cover half of all commits",
                "points": 9,
                "status": "partial",
                "details": [
                  {
                    "code": "bus_factor",
                    "params": {
                      "count": 1
                    }
                  }
                ],
                "max_points": 54
              },
              {
                "key": "commit_distribution",
                "name": "Commit distribution",
                "detail": "top contributor authored 61% of commits",
                "points": 8.8,
                "status": "partial",
                "details": [
                  {
                    "code": "top_contributor_share",
                    "params": {
                      "share": 61
                    }
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributor_breadth",
                "name": "Contributor breadth",
                "detail": "16 contributors",
                "points": 13.5,
                "status": "met",
                "details": [
                  {
                    "code": "contributors_sampled",
                    "params": {
                      "count": 16
                    }
                  }
                ],
                "max_points": 13.5
              },
              {
                "key": "openssf_scorecard_contributors",
                "name": "OpenSSF Scorecard: Contributors",
                "detail": "project has 15 contributing companies or organizations",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "responsiveness",
            "band": "good",
            "name": "Issue & PR responsiveness",
            "note": null,
            "notes": [],
            "value": 70,
            "inputs": {
              "merged_prs": 46,
              "open_issues": 27,
              "closed_issues": 153,
              "issue_closed_ratio": 0.85,
              "closed_unmerged_prs": 18
            },
            "components": [
              {
                "key": "issue_resolution",
                "name": "Issue resolution",
                "detail": "85% of issues closed",
                "points": 39.7,
                "status": "partial",
                "details": [
                  {
                    "code": "issues_closed_share",
                    "params": {
                      "share": 85
                    }
                  }
                ],
                "max_points": 46.75
              },
              {
                "key": "pr_acceptance",
                "name": "PR acceptance",
                "detail": "46/64 decided PRs merged",
                "points": 27.5,
                "status": "partial",
                "details": [
                  {
                    "code": "decided_prs_merged",
                    "params": {
                      "merged": 46,
                      "decided": 64
                    }
                  }
                ],
                "max_points": 38.25
              },
              {
                "key": "openssf_scorecard_code_review",
                "name": "OpenSSF Scorecard: Code-Review",
                "detail": "Found 2/7 approved changesets -- score normalized to 2",
                "points": 3,
                "status": "partial",
                "details": [],
                "max_points": 15
              }
            ]
          },
          {
            "key": "stewardship",
            "band": "good",
            "name": "Ownership & stewardship",
            "note": null,
            "notes": [],
            "value": 74,
            "inputs": {
              "followers": 487,
              "owner_type": "Organization",
              "is_verified": null,
              "owner_login": "saezlab",
              "public_repos": 306,
              "account_age_days": 4254
            },
            "components": [
              {
                "key": "ownership_backing",
                "name": "Ownership backing",
                "detail": "organization-owned",
                "points": 30,
                "status": "met",
                "details": [
                  {
                    "code": "owner_organization",
                    "params": {}
                  }
                ],
                "max_points": 30
              },
              {
                "key": "verified_domain",
                "name": "Verified domain",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              },
              {
                "key": "owner_reach",
                "name": "Owner reach",
                "detail": "487 followers of saezlab",
                "points": 19.3,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_followers",
                    "params": {
                      "count": 487,
                      "login": "saezlab"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "track_record",
                "name": "Track record",
                "detail": "306 public repos, account ~11 yr old",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "public_repos",
                    "params": {
                      "count": 306
                    }
                  },
                  {
                    "code": "account_age_years",
                    "params": {
                      "years": 11
                    }
                  }
                ],
                "max_points": 25
              }
            ]
          },
          {
            "key": "package_maintenance",
            "band": "excellent",
            "name": "Package maintenance",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "packages": [
                "liana"
              ],
              "ecosystems": "pypi",
              "any_deprecated": false,
              "min_days_since_publish": 5
            },
            "components": [
              {
                "key": "published_resolvable",
                "name": "Published & resolvable",
                "detail": "1 package(s) on pypi",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "packages_published",
                    "params": {
                      "count": 1,
                      "ecosystems": "pypi"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "publish_recency",
                "name": "Publish recency",
                "detail": "latest publish 5 days ago",
                "points": 35,
                "status": "met",
                "details": [
                  {
                    "code": "publish_recency",
                    "params": {
                      "days": 5
                    }
                  }
                ],
                "max_points": 35
              },
              {
                "key": "version_history",
                "name": "Version history",
                "detail": "29 published versions",
                "points": 20,
                "status": "met",
                "details": [
                  {
                    "code": "published_versions",
                    "params": {
                      "count": 29
                    }
                  }
                ],
                "max_points": 20
              },
              {
                "key": "not_deprecated",
                "name": "Not deprecated",
                "detail": "active, not deprecated or yanked",
                "points": 20,
                "status": "met",
                "details": [
                  {
                    "code": "package_not_deprecated",
                    "params": {}
                  }
                ],
                "max_points": 20
              }
            ]
          }
        ],
        "description": "Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?"
      },
      {
        "key": "engineering",
        "band": "excellent",
        "name": "Engineering Quality",
        "value": 96,
        "weight": 0.2,
        "metrics": [
          {
            "key": "engineering_practices",
            "band": "excellent",
            "name": "Engineering practices",
            "note": null,
            "notes": [],
            "value": 94,
            "inputs": {
              "has_ci": true,
              "has_tests": true,
              "has_editorconfig": false,
              "has_linter_config": true,
              "has_precommit_config": true
            },
            "components": [
              {
                "key": "ci_workflows",
                "name": "CI workflows",
                "detail": "3 workflow(s)",
                "points": 24,
                "status": "met",
                "details": [
                  {
                    "code": "ci_workflows",
                    "params": {
                      "count": 3
                    }
                  }
                ],
                "max_points": 24
              },
              {
                "key": "tests_present",
                "name": "Tests present",
                "detail": null,
                "points": 24,
                "status": "met",
                "details": [],
                "max_points": 24
              },
              {
                "key": "linter_config",
                "name": "Linter config",
                "detail": null,
                "points": 16,
                "status": "met",
                "details": [],
                "max_points": 16
              },
              {
                "key": "pre_commit_hooks",
                "name": "Pre-commit hooks",
                "detail": null,
                "points": 9.6,
                "status": "met",
                "details": [],
                "max_points": 9.6
              },
              {
                "key": "editorconfig",
                "name": ".editorconfig",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.4
              },
              {
                "key": "openssf_scorecard_ci_tests",
                "name": "OpenSSF Scorecard: CI-Tests",
                "detail": "4 out of 4 merged PRs checked by a CI test -- score normalized to 10",
                "points": 20,
                "status": "met",
                "details": [],
                "max_points": 20
              }
            ]
          },
          {
            "key": "documentation",
            "band": "excellent",
            "name": "Documentation",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "topics": [
                "cell-cell-communication",
                "ligand-receptor",
                "python",
                "single-cell",
                "single-cell-rna-seq",
                "spatial",
                "spatialomics"
              ],
              "has_wiki": true,
              "homepage": "http://liana-py.readthedocs.io/",
              "has_readme": true,
              "has_docs_dir": true,
              "has_description": true
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 30,
                "status": "met",
                "details": [],
                "max_points": 30
              },
              {
                "key": "documentation_directory",
                "name": "Documentation directory",
                "detail": null,
                "points": 25,
                "status": "met",
                "details": [],
                "max_points": 25
              },
              {
                "key": "documentation_homepage_site",
                "name": "Documentation / homepage site",
                "detail": "http://liana-py.readthedocs.io/",
                "points": 15,
                "status": "met",
                "details": [],
                "max_points": 15
              },
              {
                "key": "repository_description",
                "name": "Repository description",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "topics",
                "name": "Topics",
                "detail": "7 topics",
                "points": 10,
                "status": "met",
                "details": [
                  {
                    "code": "topics_count",
                    "params": {
                      "count": 7
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "wiki",
                "name": "Wiki",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          }
        ],
        "description": "Are baseline engineering and documentation practices in place?"
      },
      {
        "key": "security",
        "band": "moderate",
        "name": "Security",
        "value": 54,
        "weight": 0.16,
        "metrics": [
          {
            "key": "security_posture",
            "band": "at_risk",
            "name": "Security posture",
            "note": "Excluded from scoring (no data or not applicable): Branch-Protection, Signed-Releases. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "branch_protection",
                    "signed_releases"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 43,
            "inputs": {
              "source": "openssf_scorecard",
              "checks_evaluated": 16,
              "scorecard_version": "v5.5.0",
              "checks_inconclusive": 2,
              "scorecard_aggregate": 4.3
            },
            "components": [
              {
                "key": "binary_artifacts",
                "name": "Binary-Artifacts",
                "detail": "no binaries found in the repo",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "branch_protection",
                "name": "Branch-Protection",
                "detail": "internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "ci_tests",
                "name": "CI-Tests",
                "detail": "4 out of 4 merged PRs checked by a CI test -- score normalized to 10",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "cii_best_practices",
                "name": "CII-Best-Practices",
                "detail": "no effort to earn an OpenSSF best practices badge detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "code_review",
                "name": "Code-Review",
                "detail": "Found 2/7 approved changesets -- score normalized to 2",
                "points": 1.5,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "contributors",
                "name": "Contributors",
                "detail": "project has 15 contributing companies or organizations",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "dangerous_workflow",
                "name": "Dangerous-Workflow",
                "detail": "no dangerous workflow patterns detected",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "dependency_update_tool",
                "name": "Dependency-Update-Tool",
                "detail": "no update tool detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "fuzzing",
                "name": "Fuzzing",
                "detail": "project is not fuzzed",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "license file detected",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "maintained",
                "name": "Maintained",
                "detail": "30 commit(s) and 7 issue activity found in the last 90 days -- score normalized to 10",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "packaging",
                "name": "Packaging",
                "detail": "packaging workflow detected",
                "points": 5,
                "status": "met",
                "details": [],
                "max_points": 5
              },
              {
                "key": "pinned_dependencies",
                "name": "Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "sast",
                "name": "SAST",
                "detail": "SAST tool is not run on all commits -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "security_policy",
                "name": "Security-Policy",
                "detail": "security policy file not detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "signed_releases",
                "name": "Signed-Releases",
                "detail": "no releases found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "token_permissions",
                "name": "Token-Permissions",
                "detail": "detected GitHub workflow tokens with excessive permissions",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "vulnerabilities",
                "name": "Vulnerabilities",
                "detail": "41 existing vulnerabilities detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              }
            ]
          },
          {
            "key": "dependency_advisories",
            "band": "excellent",
            "name": "Dependency advisories",
            "note": "Excluded from scoring (no data or not applicable): Indirect dependencies free of known advisories, No advisories left outstanding. Remaining weights renormalized. Matched 204 resolved dependencies against OSV. This repository publishes no package the index resolves, so the repository dependency graph was assessed instead. That graph mixes development and test pins with shipped dependencies, so only the declared runtime dependencies are scored; transitive findings are reported as context and excluded from the score. Reachability is not analyzed.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "indirect_dependencies_free_of_known_advisories",
                    "no_advisories_left_outstanding"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              },
              {
                "code": "advisories_scope_repository",
                "params": {
                  "assessed": 204
                }
              },
              {
                "code": "advisories_repo_graph_caveat",
                "params": {}
              },
              {
                "code": "advisories_reachability",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "source": "osv",
              "advisories": 75,
              "affected_packages": 13,
              "assessed_packages": 204,
              "unassessed_packages": 0,
              "affected_by_severity": "critical 2, high 6, moderate 4, low 1",
              "direct_affected_packages": 0
            },
            "components": [
              {
                "key": "direct_dependencies_free_of_known_advisories",
                "name": "Direct dependencies free of known advisories",
                "detail": "no direct dependency carries a known advisory",
                "points": 35,
                "status": "met",
                "details": [
                  {
                    "code": "no_direct_advisories",
                    "params": {}
                  }
                ],
                "max_points": 35
              },
              {
                "key": "indirect_dependencies_free_of_known_advisories",
                "name": "Indirect dependencies free of known advisories",
                "detail": "transitive set not separable from development and test dependencies in this scope",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "advisories_scope_not_separable",
                    "params": {}
                  }
                ],
                "max_points": 25
              },
              {
                "key": "no_advisories_left_outstanding",
                "name": "No advisories left outstanding",
                "detail": "no advisory carries a publication date",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "advisories_no_publication_date",
                    "params": {}
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "malicious_dependencies",
            "band": "excellent",
            "name": "Malicious dependencies",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "source": "osv",
              "meaning": "reported as a malicious package by the OpenSSF corpus; the remedy is removal or moving off the compromised name, never an upgrade of the same artifact. Versions the registry has since pulled are listed but not scored",
              "packages": [],
              "red_flag": false,
              "assessed_packages": 204,
              "malicious_packages": 0,
              "direct_malicious_packages": 0,
              "withdrawn_malicious_packages": 0,
              "installable_malicious_packages": 0
            },
            "components": [
              {
                "key": "no_dependency_reported_as_a_malicious_package",
                "name": "No dependency reported as a malicious package",
                "detail": "no dependency is reported as a malicious package",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "no_malicious_dependencies",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          },
          {
            "key": "high_risk_jurisdiction_exposure",
            "band": "excellent",
            "name": "High-Risk Jurisdiction Exposure",
            "note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
            "notes": [
              {
                "code": "jurisdiction_evidence_limits",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "meaning": "self-published location evidence; not nationality or citizenship",
              "red_flag": false,
              "exposures": [],
              "policy_countries": [
                "Russia",
                "Iran",
                "North Korea"
              ],
              "review_only_matches": 0,
              "assessed_self_published_locations": 19
            },
            "components": [
              {
                "key": "policy_exposure_multiplier",
                "name": "Policy exposure multiplier",
                "detail": "no confirmed policy-scope location match",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "jurisdiction_no_match",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
      },
      {
        "key": "ai_readiness",
        "band": "at_risk",
        "name": "AI Readiness",
        "value": 38,
        "weight": 0,
        "metrics": [
          {
            "key": "ai_agent_context",
            "band": "critical",
            "name": "Agent context & guidance",
            "note": null,
            "notes": [],
            "value": 7,
            "inputs": {
              "has_llms_txt": false,
              "legible_history_share": 0.124,
              "agent_instruction_files": [],
              "agent_instruction_max_bytes": null
            },
            "components": [
              {
                "key": "agent_instructions",
                "name": "Agent instructions",
                "detail": "no CLAUDE.md / AGENTS.md / editor rules",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_instructions",
                    "params": {}
                  }
                ],
                "max_points": 45
              },
              {
                "key": "machine_readable_docs_llms_txt",
                "name": "Machine-readable docs (llms.txt)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              },
              {
                "key": "legible_commit_history",
                "name": "Legible commit history",
                "detail": "12 of 97 human commits state their intent (structured subject or explanatory body)",
                "points": 6.6,
                "status": "partial",
                "details": [
                  {
                    "code": "legible_history",
                    "params": {
                      "legible": 12,
                      "sampled": 97
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "ai_verify_loop",
            "band": "moderate",
            "name": "Verify loop (build / test / typecheck)",
            "note": null,
            "notes": [],
            "value": 53,
            "inputs": {
              "has_nix": false,
              "has_tests": true,
              "lockfiles": [
                "uv.lock"
              ],
              "has_dockerfile": false,
              "typed_language": false,
              "bootstrap_files": [],
              "has_devcontainer": false,
              "has_linter_config": true,
              "typecheck_configs": [],
              "agent_commit_share": 0.1,
              "toolchain_manifests": [],
              "dependency_bot_commit_share": 0
            },
            "components": [
              {
                "key": "one_command_bootstrap",
                "name": "One-command bootstrap",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 18
              },
              {
                "key": "automated_tests",
                "name": "Automated tests",
                "detail": null,
                "points": 22,
                "status": "met",
                "details": [],
                "max_points": 22
              },
              {
                "key": "lint_format_config",
                "name": "Lint / format config",
                "detail": null,
                "points": 11,
                "status": "met",
                "details": [],
                "max_points": 11
              },
              {
                "key": "static_type_checking",
                "name": "Static type checking",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "reproducible_environment",
                "name": "Reproducible environment",
                "detail": "lockfile",
                "points": 10,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "lockfile"
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "demonstrated_agent_practice",
                "name": "Demonstrated agent practice",
                "detail": "10 of the last 100 commits agent-authored or agent-credited",
                "points": 10,
                "status": "met",
                "details": [
                  {
                    "code": "agent_authored_commits",
                    "params": {
                      "count": 10,
                      "sampled": 100
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "automated_maintenance",
                "name": "Automated maintenance",
                "detail": "no automated dependency updates observed",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_dependency_automation",
                    "params": {}
                  }
                ],
                "max_points": 8
              },
              {
                "key": "openssf_scorecard_pinned_dependencies",
                "name": "OpenSSF Scorecard: Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "ai_code_legibility",
            "band": "moderate",
            "name": "Code legibility for models",
            "note": null,
            "notes": [],
            "value": 55,
            "inputs": {
              "primary_language": "Python",
              "largest_source_bytes": 30684,
              "source_files_sampled": 106,
              "oversized_source_files": 0
            },
            "components": [
              {
                "key": "type_checkable_code",
                "name": "Type-checkable code",
                "detail": "Python without a type-check config",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_typecheck_config_language",
                    "params": {
                      "language": "Python"
                    }
                  }
                ],
                "max_points": 45
              },
              {
                "key": "manageable_file_sizes",
                "name": "Manageable file sizes",
                "detail": "0/106 source files over 60KB",
                "points": 55,
                "status": "met",
                "details": [
                  {
                    "code": "oversized_source_files",
                    "params": {
                      "kb": 60,
                      "sampled": 106,
                      "oversized": 0
                    }
                  }
                ],
                "max_points": 55
              }
            ]
          },
          {
            "key": "ai_interfaces",
            "band": "at_risk",
            "name": "Machine-readable interfaces",
            "note": null,
            "notes": [],
            "value": 40,
            "inputs": {
              "example_dirs": [
                "notebooks"
              ],
              "has_mcp_signal": false,
              "api_schema_files": []
            },
            "components": [
              {
                "key": "api_schema_openapi_graphql_proto",
                "name": "API schema (OpenAPI/GraphQL/proto)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 40
              },
              {
                "key": "mcp_server",
                "name": "MCP server",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              },
              {
                "key": "runnable_examples",
                "name": "Runnable examples",
                "detail": "notebooks",
                "points": 40,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "notebooks"
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          }
        ],
        "description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
      }
    ],
    "metrics_version": "1.13.0"
  },
  "warnings": [
    "deps.dev does not index pypi:liana@1.8.1; advisories assessed against the repository dependency graph instead"
  ],
  "report_type": "repository",
  "generated_at": "2026-07-21T21:22:29.975173Z",
  "schema_version": "0.23.0",
  "badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/s/saezlab/liana-py.svg",
  "full_name": "saezlab/liana-py",
  "license_state": "standard",
  "license_spdx": "BSD-3-Clause"
}

Las puntuaciones son señales, no garantías. Reflejan prácticas públicamente visibles en GitHub; no son una auditoría de código ni una garantía de seguridad.

Los datos ausentes se excluyen y los pesos se renormalizan; nunca se puntúan como cero. La metodología es versionada y abierta: métricas v1.13.0, esquema v0.23.0 — metodología completa · wiki de métricas.

Cómo se sitúa un resultado dentro del registro general: estadísticas agregadasPyPI.