Публічний реєстр
Звіт про здоров'я програмного забезпеченнясхема 0.27.0 · метрики 1.14.0 · 2026-07-27 21:43 UTC

scverse / muon

muon is a multimodal omics Python framework

PythonBSD-3-Clause★ 277 зірок⑂ 37 форківз лют. 2020 р.Переглянути на GitHub ↗

scverse/muon має індекс здоров’я 69 зі 100, що відповідає смузі «Помірний». Найвищий показник — Engineering Quality (92/100), найнижчий — AI Readiness (41/100). Останнє оновлення було 3 дні тому. Більшість нещодавньої роботи виконує один учасник.

69
загалом / 100
Помірний

Індекс здоров'я програмного забезпечення

Метрики згруповано у зважені категорії на шкалі 1–100. Загальна оцінка починається як їхнє середнє; коли публічні дані активують Політику юрисдикцій високого ризику, рейтинг коригується й отримує верхню межу 49 («Під ризиком»). Готовність до ШІ не входить до індексу.

69
Відмінний85-100Зразковий; відповідає практично всім перевіреним критеріям
Добрий70-84Здоровий; незначні прогалини
Помірний50-69Прийнятний, але з помітними прогалинами; рекомендовано перевірку
У зоні ризику30-49Суттєві слабкі місця; впровадження потребує обережності
Критичний1-29Серйозні проблеми (покинутий, єдиний мейнтейнер, без базової гігієни)
ЖиттєздатністьСпільнота тавпровадженняСталість таврядуванняІнженернаякістьБезпекаГотовність доШІ

Профіль оцінок

Кожна вісь — окрема категорія. Форма важить більше, ніж середнє: здоровий об'єкт заповнює всю фігуру, тоді як профіль із піками та провалами означає, що сила в одному вимірі маскує ризик в іншому.

Власність

scverseОрганізація
1 520 підписників87 публічних репозиторіївз лист. 2021 р.

За цим репозиторієм стоїть організація — спільна, підзвітна опіка, здатна пережити будь-якого окремого мейнтейнера.

Метрики за категоріями

Життєздатність

Чи живий проєкт — чи пишеться код і чи виходять релізи?

60Помірний · 22% загального індексу
Як обчислюється оцінка
36/36Свіжість push — останній push 3 дн. тому
9/36Ритм комітів — 13/52 тижнів із комітами
13/18Обсяг комітів — 27 комітів за останній рік
8/10OpenSSF Scorecard: Maintained — 9 commit(s) and 1 issue activity found in the last 90 days -- score normalized to 8
Використані вхідні дані
commits_last_year27
human_commit_share1
days_since_last_push3
active_weeks_last_year13
Як обчислюється оцінка
27/27Випускає релізи — опубліковано 8 релізів
7.2/36Свіжість релізів — останній реліз 635 дн. тому
12.6/27Ритм релізів — реліз кожні ~177,2 дн.
0/10OpenSSF Scorecard: Signed-Releases — немає даних
Використані вхідні дані
releases_count8
latest_release_tagv0.1.7
releases_from_tagsні
days_since_latest_release635
mean_days_between_releases177,2
Виключено з оцінювання (немає даних або не застосовно): OpenSSF Scorecard: Signed-Releases. Залишкові ваги перенормовано.

Спільнота та впровадження

Чи має проєкт користувачів, завантаження, увагу та влаштовані умови для контриб’юторів?

71Добрий · 18% загального індексу
Як обчислюється оцінка
39.6/60Зірки — 277 зірок
13/25Форки — 37 форків
5.3/15Спостерігачі — 10 спостерігачів
Використані вхідні дані
forks37
stars277
watchers10
growth_stateunverified
growth_factor_pct100
growth_unverified_reasonno_history
Як обчислюється оцінка
22.5/22.5README
22.5/22.5Ліцензія — визнана ліцензія (BSD-3-Clause)
18/18Настанови CONTRIBUTING
13.5/13.5Кодекс поведінки
0/7.2Шаблон issue
0/6.3Шаблон PR
Використані вхідні дані
has_readmeтак
has_licenseтак
has_contributingтак
has_issue_templateні
has_code_of_conductтак
has_pull_request_templateні

Сталість та врядування

Чи переживе проєкт своїх людей — бас-фактор, реактивність, хто за ним стоїть і як супроводжуються пакети?

62Помірний · 24% загального індексу
Як обчислюється оцінка
9/54Бас-фактор — на 1 контриб’ютор(ів) припадає половина всіх комітів
6.5/22.5Розподіл комітів — головний контриб’ютор — автор 71% комітів
13.5/13.5Широта контриб’юторів — 23 контриб’юторів
10/10OpenSSF Scorecard: Contributors — project has 17 contributing companies or organizations
Використані вхідні дані
bus_factor1
contributors_sampled23
top_contributor_share0,709
Як обчислюється оцінка
35.9/46.8Вирішення issue — закрито 77% issue
36.4/38.3Прийняття PR — злито 40/42 вирішених PR
4.5/15OpenSSF Scorecard: Code-Review — Found 9/24 approved changesets -- score normalized to 3
Використані вхідні дані
merged_prs40
open_issues35
closed_issues116
issue_closed_ratio0,768
closed_unmerged_prs2
Як обчислюється оцінка
30/30Підтримка власника — у власності організації
0/20Верифікований домен
22.9/25Охоплення власника — 1 520 підписників у scverse
22.3/25Послужний список — 87 публічних репозиторіїв, вік облікового запису ~4 р.
Використані вхідні дані
followers1 520
owner_typeOrganization
is_verified
owner_loginscverse
public_repos87
account_age_days1 700

Інженерна якість

Чи наявні базові інженерні практики та документація?

92Відмінний · 20% загального індексу
Як обчислюється оцінка
24/24Процеси CI — 3 процес(ів) CI
24/24Наявні тести
16/16Конфігурація лінтера
9.6/9.6Pre-commit-хуки
6.4/6.4.editorconfig
14/20OpenSSF Scorecard: CI-Tests — 7 out of 10 merged PRs checked by a CI test -- score normalized to 7
Використані вхідні дані
has_ciтак
has_testsтак
has_editorconfigтак
has_linter_configтак
has_precommit_configтак

Документація

90Відмінний
Як обчислюється оцінка
30/30README
25/25Каталог документації
15/15Сайт документації / домашня сторінка — https://muon.scverse.org/
10/10Опис репозиторію
10/10Теми — 11 тем
0/10Wiki
Використані вхідні дані
topicsmultimodal-data, multimodal-omics-analysis, multi-omics, anndata, scanpy, mudata, muon, scrna-seq, scatac-seq, cite-seq, scverse
has_wikiні
homepagehttps://muon.scverse.org/
has_readmeтак
has_docs_dirтак
has_descriptionтак

Безпека

Чи міцні видимі практики безпеки й ланцюга постачання, без непослабленої пов’язаності з юрисдикціями високого ризику?

60Помірний · 16% загального індексу

Стан безпеки

50Помірний
Як обчислюється оцінка
7.5/7.5Binary-Artifacts — no binaries found in the repo
2.2/7.5Branch-Protection — branch protection is not maximal on development and all release branches
1.8/2.5CI-Tests — 7 out of 10 merged PRs checked by a CI test -- score normalized to 7
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
2.2/7.5Code-Review — Found 9/24 approved changesets -- score normalized to 3
2.5/2.5Contributors — project has 17 contributing companies or organizations
10/10Dangerous-Workflow — no dangerous workflow patterns detected
0/7.5Dependency-Update-Tool — no update tool detected
0/5Fuzzing — project is not fuzzed
2.5/2.5Ліцензія — license file detected
6/7.5Maintained — 9 commit(s) and 1 issue activity found in the last 90 days -- score normalized to 8
5/5Packaging — packaging workflow detected
1.5/5Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 3
0/5SAST — SAST tool is not run on all commits -- score normalized to 0
0/5Security-Policy — security policy file not detected
0/7.5Signed-Releases — немає даних
0/7.5Token-Permissions — detected GitHub workflow tokens with excessive permissions
7.5/7.5Vulnerabilities — 0 existing vulnerabilities detected
Використані вхідні дані
sourceopenssf_scorecard
checks_evaluated17
scorecard_versionv5.5.0
checks_inconclusive1
scorecard_aggregate5
Виключено з оцінювання (немає даних або не застосовно): signed_releases. Залишкові ваги перенормовано.
Як обчислюється оцінка
35/35Прямі залежності без відомих сповіщень — жодна пряма залежність не має відомих сповіщень
0/25Непрямі залежності без відомих сповіщень — транзитивний набір не відокремлюється від залежностей розробки й тестування в цьому обсязі
0/40Немає задавнених сповіщень — жодне сповіщення не має дати публікації
Використані вхідні дані
sourceosv
advisories0
affected_packages0
assessed_packages9
unassessed_packages1
affected_by_severitynone
direct_affected_packages0
Виключено з оцінювання (немає даних або не застосовно): Непрямі залежності без відомих сповіщень, Немає задавнених сповіщень. Залишкові ваги перенормовано. Звірено 9 резолвлених залежностей із OSV. 1 не вдалося оцінити — немає резолвленої версії, непідтримувана екосистема або поза межами звітованого переліку пакетів. Цей репозиторій не публікує пакета, який резолвить індекс, тож натомість оцінено граф залежностей репозиторію. Цей граф змішує закріплені версії для розробки й тестування зі справді постачаними залежностями, тож оцінюються лише задекларовані runtime-залежності; транзитивні знахідки подаються як контекст і в оцінку не входять. Досяжність не аналізується.

Готовність до ШІ

Наскільки репозиторій оснащений для розробки та супроводу за участі ШІ-агентів? Незалежний, експериментальний бейдж — вага 0.0, тож він подається окремо і не впливає на загальний індекс здоров'я.

41У зоні ризику · 0% загального індексу
Як обчислюється оцінка
0/45Інструкції для агентів — немає CLAUDE.md / AGENTS.md / правил редактора
0/15Машиночитана документація (llms.txt)
15.5/40Читабельна історія комітів — намір зазначено у 29 з 100 людських комітів (структурований заголовок або пояснювальний текст)
Використані вхідні дані
has_llms_txtні
legible_history_share0,29
agent_instruction_files
agent_instruction_max_bytes
Як обчислюється оцінка
18/18Розгортання однією командою — docs/Makefile
22/22Автоматизовані тести
11/11Конфігурація лінтера / форматера
0/11Статична перевірка типів
0/10Відтворюване середовище
2/10Підтверджена практика роботи з агентами — 1 з останніх 100 комітів створено агентом або з його зазначенням
0/8Автоматизоване супроводження — автоматичних оновлень залежностей не виявлено
3/10OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 3
Використані вхідні дані
has_nixні
has_testsтак
lockfiles
has_dockerfileні
typed_languageні
bootstrap_filesdocs/Makefile
has_devcontainerні
has_linter_configтак
typecheck_configs
agent_commit_share0,01
toolchain_manifests
dependency_bot_commit_share0
Як обчислюється оцінка
0/45Типізований код — Python без конфігурації перевірки типів
55/55Керовані розміри файлів — 0/31 файлів вихідного коду понад 60 КБ
Використані вхідні дані
primary_languagePython
largest_source_bytes52 400
source_files_sampled31
oversized_source_files0
Як обчислюється оцінка
0/40Схема API (OpenAPI/GraphQL/proto)
0/20Сервер MCP
40/40Придатні до запуску приклади — notebooks
Використані вхідні дані
example_dirsnotebooks
has_mcp_signalні
api_schema_files

Ключові факти

277зірок GitHub
23контриб'юторів
27комітів за останні 12 місяців
3днів від останнього пушу
8релізів
1бас-фактор
35відкритих issue
PyPIпакетних екосистем

Попередження щодо збору даних

  • Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token

Докладніше

Історія зірок і форків 0 ★ / 37 ⇿
0Зірки
37Форки
8Релізи

Коли додано кожну зірку й форк — зібрано з GitHub і згруповано за днями. Кумулятивне зростання розміщено просто над денними додаваннями, з яких воно складається, тож їх видно одне проти одного: рівномірне органічне накопичення виглядає зовсім інакше, ніж різкий короткочасний сплеск. Там, де цю різницю можна виміряти, її подано як автентичність росту.

01325383712021-052023-122026-06
Мажорні 0Мінорні 1Патчі 7

Кожна точка охоплює 5 днів.

OpenSSF Scorecard 5.0 / 10
5.0сукупно

Незалежна, не прив'язана до інструментів оцінка безпеки від відкритого проєкту OpenSSF Scorecard. Кожна перевірка винагороджує практику безпеки, а не інструмент конкретного постачальника. Перевірки, які Scorecard не зміг визначити, позначено н/д і виключено з оцінки безпеки (вони ніколи не зараховуються як нуль).Scorecard v5.5.0 · 2026-07-27 21:42 UTC

10Binary-Artifactsno binaries found in the repo
3Branch-Protectionbranch protection is not maximal on development and all release branches
7CI-Tests7 out of 10 merged PRs checked by a CI test -- score normalized to 7
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
3Code-ReviewFound 9/24 approved changesets -- score normalized to 3
10Contributorsproject has 17 contributing companies or organizations
10Dangerous-Workflowno dangerous workflow patterns detected
0Dependency-Update-Toolno update tool detected
0Fuzzingproject is not fuzzed
10Licenselicense file detected
8Maintained9 commit(s) and 1 issue activity found in the last 90 days -- score normalized to 8
10Packagingpackaging workflow detected
3Pinned-Dependenciesdependency not pinned by hash detected -- score normalized to 3
0SASTSAST tool is not run on all commits -- score normalized to 0
0Security-Policysecurity policy file not detected
н/дSigned-Releasesno releases found
0Token-Permissionsdetected GitHub workflow tokens with excessive permissions
10Vulnerabilities0 existing vulnerabilities detected
Усі залежності 10

Повний розв'язаний набір залежностей із графа залежностей GitHub: 0 прямих і 10 непрямих (транзитивних) пакетів. Транзитивне замикання є повним, коли в репозиторії закомічено lockfile.

РеєстрПакетВерсіяЗв'язок
PyPIcommonmark0.9.1непряма
PyPImuonнепряма
PyPInbsphinx0.9.3непряма
PyPIpydata-sphinx-theme0.15.2непряма
PyPIreadthedocs-sphinx-search0.3.2непряма
PyPIrecommonmark0.7.1непряма
PyPIsphinx7.2.6непряма
PyPIsphinx-automodapi0.17.0непряма
PyPIsphinx-book-theme1.1.2непряма
PyPIsphinx-rtd-theme2.0.0непряма
Сповіщення про залежності 0

Цей репозиторій не публікує пакета, який розпізнає індекс, тож оцінено його власний граф залежностей — 9 пакетів, серед яких є й піниї розробки та тестування, що ніколи не постачаються: 0 мають відомі сповіщення, з них 0 прямі. 1 не вдалося оцінити — немає резолвленої версії, непідтримувана екосистема або поза наведеним переліком пакетів.

Жодне відоме сповіщення не стосується оцінених залежностей.

Сповіщення означає, що версія, записана в графі залежностей, потрапляє в уражений діапазон. Досяжність не аналізується, а граф містить піниї розробки й тестування — знахідка може стосуватися інструментів, а не поставленого коду.

Звіт у форматі JSON машиночитний
{
  "data": {
    "repo": {
      "topics": [
        "multimodal-data",
        "multimodal-omics-analysis",
        "multi-omics",
        "anndata",
        "scanpy",
        "mudata",
        "muon",
        "scrna-seq",
        "scatac-seq",
        "cite-seq",
        "scverse"
      ],
      "is_fork": false,
      "size_kb": 5293,
      "has_wiki": false,
      "homepage": "https://muon.scverse.org/",
      "languages": {
        "Python": 226318
      },
      "pushed_at": "2026-07-24T15:17:34Z",
      "created_at": "2020-02-03T02:00:15Z",
      "owner_type": "Organization",
      "updated_at": "2026-07-24T09:20:40Z",
      "description": "muon is a multimodal omics Python framework",
      "is_archived": false,
      "is_disabled": false,
      "license_spdx": "BSD-3-Clause",
      "default_branch": "main",
      "license_spdx_raw": "BSD-3-Clause",
      "primary_language": "Python",
      "significant_languages": [
        "Python"
      ]
    },
    "owner": {
      "blog": "https://scverse.org",
      "name": "scverse",
      "type": "Organization",
      "login": "scverse",
      "company": null,
      "location": null,
      "followers": 1520,
      "avatar_url": "https://avatars.githubusercontent.com/u/95305807?v=4",
      "created_at": "2021-11-30T17:11:32Z",
      "is_verified": null,
      "public_repos": 87,
      "account_age_days": 1700
    },
    "license": {
      "state": "standard",
      "spdx_id": "BSD-3-Clause",
      "raw_spdx": "BSD-3-Clause",
      "file_present": true,
      "scorecard_found": true,
      "profile_has_license": true
    },
    "activity": {
      "releases": [
        {
          "tag": "v0.1.7",
          "kind": "patch",
          "published_at": "2024-10-30T09:58:51Z"
        },
        {
          "tag": "v0.1.6",
          "kind": "patch",
          "published_at": "2024-08-01T01:56:22Z"
        },
        {
          "tag": "v0.1.5",
          "kind": "patch",
          "published_at": "2023-06-08T08:53:10Z"
        },
        {
          "tag": "v0.1.4",
          "kind": "patch",
          "published_at": "2023-06-07T09:07:16Z"
        },
        {
          "tag": "v0.1.3",
          "kind": "patch",
          "published_at": "2023-02-20T20:12:58Z"
        },
        {
          "tag": "v0.1.2",
          "kind": "patch",
          "published_at": "2021-12-13T13:07:04Z"
        },
        {
          "tag": "v0.1.1",
          "kind": "patch",
          "published_at": "2021-10-08T16:27:15Z"
        },
        {
          "tag": "v0.1.0",
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                  {
                    "code": "release_recency",
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              {
                "key": "release_cadence",
                "name": "Release cadence",
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                  {
                    "code": "release_cadence",
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                "max_points": 27
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              {
                "key": "openssf_scorecard_signed_releases",
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                "max_points": 10
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            ]
          },
          {
            "key": "abandonment",
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              "cap": null,
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            "components": [
              {
                "key": "project_is_still_maintained",
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                  {
                    "code": "abandonment_maintained",
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          }
        ],
        "description": "Is the project alive — is code being written and are releases shipping?"
      },
      {
        "key": "community",
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        "weight": 0.18,
        "metrics": [
          {
            "key": "popularity",
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            "note": null,
            "notes": [],
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              "forks": 37,
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            "components": [
              {
                "key": "stars",
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                "detail": "277 stars",
                "points": 39.6,
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                    "code": "stars",
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                  }
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                "max_points": 60
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              {
                "key": "forks",
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                    "code": "forks",
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                      "count": 37
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                "max_points": 25
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              {
                "key": "watchers",
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                    "code": "watchers",
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                      "count": 10
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                  }
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                "max_points": 15
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            ]
          },
          {
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            "note": null,
            "notes": [],
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            "inputs": {
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              "has_contributing": true,
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                "key": "readme",
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              {
                "key": "license",
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                "detail": "recognized license (BSD-3-Clause)",
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                "details": [
                  {
                    "code": "license_standard",
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                  {
                    "code": "license_spdx",
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                      "spdx": "BSD-3-Clause"
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                "max_points": 22.5
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              {
                "key": "contributing_guide",
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              },
              {
                "key": "code_of_conduct",
                "name": "Code of conduct",
                "detail": null,
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              {
                "key": "issue_template",
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            ]
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        ],
        "description": "Does the project have users, downloads, attention, and a welcoming setup for contributors?"
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      {
        "key": "governance",
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        "name": "Sustainability & Governance",
        "value": 62,
        "weight": 0.24,
        "metrics": [
          {
            "key": "maintainer_resilience",
            "band": "at_risk",
            "name": "Maintainer resilience (bus factor)",
            "note": null,
            "notes": [],
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              "bus_factor": 1,
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              "top_contributor_share": 0.709
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            "components": [
              {
                "key": "bus_factor",
                "name": "Bus factor",
                "detail": "1 contributor(s) cover half of all commits",
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                "status": "partial",
                "details": [
                  {
                    "code": "bus_factor",
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                "max_points": 54
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                "key": "commit_distribution",
                "name": "Commit distribution",
                "detail": "top contributor authored 71% of commits",
                "points": 6.5,
                "status": "partial",
                "details": [
                  {
                    "code": "top_contributor_share",
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                "max_points": 22.5
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              {
                "key": "contributor_breadth",
                "name": "Contributor breadth",
                "detail": "23 contributors",
                "points": 13.5,
                "status": "met",
                "details": [
                  {
                    "code": "contributors_sampled",
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                      "count": 23
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                  }
                ],
                "max_points": 13.5
              },
              {
                "key": "openssf_scorecard_contributors",
                "name": "OpenSSF Scorecard: Contributors",
                "detail": "project has 17 contributing companies or organizations",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
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            ]
          },
          {
            "key": "responsiveness",
            "band": "good",
            "name": "Issue & PR responsiveness",
            "note": null,
            "notes": [],
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            "inputs": {
              "merged_prs": 40,
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              "closed_issues": 116,
              "issue_closed_ratio": 0.768,
              "closed_unmerged_prs": 2
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            "components": [
              {
                "key": "issue_resolution",
                "name": "Issue resolution",
                "detail": "77% of issues closed",
                "points": 35.9,
                "status": "partial",
                "details": [
                  {
                    "code": "issues_closed_share",
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                      "share": 77
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                  }
                ],
                "max_points": 46.75
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              {
                "key": "pr_acceptance",
                "name": "PR acceptance",
                "detail": "40/42 decided PRs merged",
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                "status": "partial",
                "details": [
                  {
                    "code": "decided_prs_merged",
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                      "merged": 40,
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                  }
                ],
                "max_points": 38.25
              },
              {
                "key": "openssf_scorecard_code_review",
                "name": "OpenSSF Scorecard: Code-Review",
                "detail": "Found 9/24 approved changesets -- score normalized to 3",
                "points": 4.5,
                "status": "partial",
                "details": [],
                "max_points": 15
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            ]
          },
          {
            "key": "stewardship",
            "band": "good",
            "name": "Ownership & stewardship",
            "note": null,
            "notes": [],
            "value": 75,
            "inputs": {
              "followers": 1520,
              "owner_type": "Organization",
              "is_verified": null,
              "owner_login": "scverse",
              "public_repos": 87,
              "account_age_days": 1700
            },
            "components": [
              {
                "key": "ownership_backing",
                "name": "Ownership backing",
                "detail": "organization-owned",
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                "status": "met",
                "details": [
                  {
                    "code": "owner_organization",
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                ],
                "max_points": 30
              },
              {
                "key": "verified_domain",
                "name": "Verified domain",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              },
              {
                "key": "owner_reach",
                "name": "Owner reach",
                "detail": "1,520 followers of scverse",
                "points": 22.9,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_followers",
                    "params": {
                      "count": 1520,
                      "login": "scverse"
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                  }
                ],
                "max_points": 25
              },
              {
                "key": "track_record",
                "name": "Track record",
                "detail": "87 public repos, account ~4 yr old",
                "points": 22.3,
                "status": "partial",
                "details": [
                  {
                    "code": "public_repos",
                    "params": {
                      "count": 87
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                  },
                  {
                    "code": "account_age_years",
                    "params": {
                      "years": 4
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                  }
                ],
                "max_points": 25
              }
            ]
          }
        ],
        "description": "Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?"
      },
      {
        "key": "engineering",
        "band": "excellent",
        "name": "Engineering Quality",
        "value": 92,
        "weight": 0.2,
        "metrics": [
          {
            "key": "engineering_practices",
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            "name": "Engineering practices",
            "note": null,
            "notes": [],
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            "inputs": {
              "has_ci": true,
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              "has_editorconfig": true,
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              "has_precommit_config": true
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            "components": [
              {
                "key": "ci_workflows",
                "name": "CI workflows",
                "detail": "3 workflow(s)",
                "points": 24,
                "status": "met",
                "details": [
                  {
                    "code": "ci_workflows",
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                "max_points": 24
              },
              {
                "key": "tests_present",
                "name": "Tests present",
                "detail": null,
                "points": 24,
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                "details": [],
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              },
              {
                "key": "linter_config",
                "name": "Linter config",
                "detail": null,
                "points": 16,
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                "max_points": 16
              },
              {
                "key": "pre_commit_hooks",
                "name": "Pre-commit hooks",
                "detail": null,
                "points": 9.6,
                "status": "met",
                "details": [],
                "max_points": 9.6
              },
              {
                "key": "editorconfig",
                "name": ".editorconfig",
                "detail": null,
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                "details": [],
                "max_points": 6.4
              },
              {
                "key": "openssf_scorecard_ci_tests",
                "name": "OpenSSF Scorecard: CI-Tests",
                "detail": "7 out of 10 merged PRs checked by a CI test -- score normalized to 7",
                "points": 14,
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            ]
          },
          {
            "key": "documentation",
            "band": "excellent",
            "name": "Documentation",
            "note": null,
            "notes": [],
            "value": 90,
            "inputs": {
              "topics": [
                "multimodal-data",
                "multimodal-omics-analysis",
                "multi-omics",
                "anndata",
                "scanpy",
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                "scrna-seq",
                "scatac-seq",
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              "has_wiki": false,
              "homepage": "https://muon.scverse.org/",
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              {
                "key": "readme",
                "name": "README",
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              },
              {
                "key": "documentation_directory",
                "name": "Documentation directory",
                "detail": null,
                "points": 25,
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              },
              {
                "key": "documentation_homepage_site",
                "name": "Documentation / homepage site",
                "detail": "https://muon.scverse.org/",
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              },
              {
                "key": "repository_description",
                "name": "Repository description",
                "detail": null,
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              },
              {
                "key": "topics",
                "name": "Topics",
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                "details": [
                  {
                    "code": "topics_count",
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                ],
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              {
                "key": "wiki",
                "name": "Wiki",
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                "points": 0,
                "status": "missed",
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              }
            ]
          }
        ],
        "description": "Are baseline engineering and documentation practices in place?"
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      {
        "key": "security",
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        "name": "Security",
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        "weight": 0.16,
        "metrics": [
          {
            "key": "security_posture",
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            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
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                }
              },
              {
                "code": "weights_renormalized",
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              }
            ],
            "value": 50,
            "inputs": {
              "source": "openssf_scorecard",
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              "scorecard_aggregate": 5
            },
            "components": [
              {
                "key": "binary_artifacts",
                "name": "Binary-Artifacts",
                "detail": "no binaries found in the repo",
                "points": 7.5,
                "status": "met",
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              },
              {
                "key": "branch_protection",
                "name": "Branch-Protection",
                "detail": "branch protection is not maximal on development and all release branches",
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              },
              {
                "key": "ci_tests",
                "name": "CI-Tests",
                "detail": "7 out of 10 merged PRs checked by a CI test -- score normalized to 7",
                "points": 1.8,
                "status": "partial",
                "details": [],
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              },
              {
                "key": "cii_best_practices",
                "name": "CII-Best-Practices",
                "detail": "no effort to earn an OpenSSF best practices badge detected",
                "points": 0,
                "status": "missed",
                "details": [],
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              },
              {
                "key": "code_review",
                "name": "Code-Review",
                "detail": "Found 9/24 approved changesets -- score normalized to 3",
                "points": 2.2,
                "status": "partial",
                "details": [],
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              },
              {
                "key": "contributors",
                "name": "Contributors",
                "detail": "project has 17 contributing companies or organizations",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "dangerous_workflow",
                "name": "Dangerous-Workflow",
                "detail": "no dangerous workflow patterns detected",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "dependency_update_tool",
                "name": "Dependency-Update-Tool",
                "detail": "no update tool detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "fuzzing",
                "name": "Fuzzing",
                "detail": "project is not fuzzed",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "license file detected",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "maintained",
                "name": "Maintained",
                "detail": "9 commit(s) and 1 issue activity found in the last 90 days -- score normalized to 8",
                "points": 6,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "packaging",
                "name": "Packaging",
                "detail": "packaging workflow detected",
                "points": 5,
                "status": "met",
                "details": [],
                "max_points": 5
              },
              {
                "key": "pinned_dependencies",
                "name": "Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 3",
                "points": 1.5,
                "status": "partial",
                "details": [],
                "max_points": 5
              },
              {
                "key": "sast",
                "name": "SAST",
                "detail": "SAST tool is not run on all commits -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "security_policy",
                "name": "Security-Policy",
                "detail": "security policy file not detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "signed_releases",
                "name": "Signed-Releases",
                "detail": "no releases found",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "token_permissions",
                "name": "Token-Permissions",
                "detail": "detected GitHub workflow tokens with excessive permissions",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "vulnerabilities",
                "name": "Vulnerabilities",
                "detail": "0 existing vulnerabilities detected",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              }
            ]
          },
          {
            "key": "dependency_advisories",
            "band": "excellent",
            "name": "Dependency advisories",
            "note": "Excluded from scoring (no data or not applicable): Indirect dependencies free of known advisories, No advisories left outstanding. Remaining weights renormalized. Matched 9 resolved dependencies against OSV; 1 could not be assessed (no resolved version, an unsupported ecosystem, or beyond the reported package list). This repository publishes no package the index resolves, so the repository dependency graph was assessed instead. That graph mixes development and test pins with shipped dependencies, so only the declared runtime dependencies are scored; transitive findings are reported as context and excluded from the score. Reachability is not analyzed.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
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                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              },
              {
                "code": "advisories_scope_repository",
                "params": {
                  "assessed": 9
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              },
              {
                "code": "advisories_unassessed",
                "params": {
                  "count": 1
                }
              },
              {
                "code": "advisories_repo_graph_caveat",
                "params": {}
              },
              {
                "code": "advisories_reachability",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "source": "osv",
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              "affected_packages": 0,
              "assessed_packages": 9,
              "unassessed_packages": 1,
              "affected_by_severity": "none",
              "direct_affected_packages": 0
            },
            "components": [
              {
                "key": "direct_dependencies_free_of_known_advisories",
                "name": "Direct dependencies free of known advisories",
                "detail": "no direct dependency carries a known advisory",
                "points": 35,
                "status": "met",
                "details": [
                  {
                    "code": "no_direct_advisories",
                    "params": {}
                  }
                ],
                "max_points": 35
              },
              {
                "key": "indirect_dependencies_free_of_known_advisories",
                "name": "Indirect dependencies free of known advisories",
                "detail": "transitive set not separable from development and test dependencies in this scope",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "advisories_scope_not_separable",
                    "params": {}
                  }
                ],
                "max_points": 25
              },
              {
                "key": "no_advisories_left_outstanding",
                "name": "No advisories left outstanding",
                "detail": "no advisory carries a publication date",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "advisories_no_publication_date",
                    "params": {}
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "malicious_dependencies",
            "band": "excellent",
            "name": "Malicious dependencies",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "source": "osv",
              "meaning": "reported as a malicious package by the OpenSSF corpus; the remedy is removal or moving off the compromised name, never an upgrade of the same artifact. Versions the registry has since pulled are listed but not scored",
              "packages": [],
              "red_flag": false,
              "assessed_packages": 9,
              "malicious_packages": 0,
              "direct_malicious_packages": 0,
              "withdrawn_malicious_packages": 0,
              "installable_malicious_packages": 0
            },
            "components": [
              {
                "key": "no_dependency_reported_as_a_malicious_package",
                "name": "No dependency reported as a malicious package",
                "detail": "no dependency is reported as a malicious package",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "no_malicious_dependencies",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          },
          {
            "key": "high_risk_jurisdiction_exposure",
            "band": "excellent",
            "name": "High-Risk Jurisdiction Exposure",
            "note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
            "notes": [
              {
                "code": "jurisdiction_evidence_limits",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "meaning": "self-published location evidence; not nationality or citizenship",
              "red_flag": false,
              "exposures": [],
              "policy_countries": [
                "Russia",
                "Iran",
                "North Korea"
              ],
              "commit_weight_rule": {
                "min_commits": 50,
                "min_commit_share": 0.1
              },
              "review_only_matches": 0,
              "below_threshold_exposures": [],
              "assessed_self_published_locations": 12
            },
            "components": [
              {
                "key": "policy_exposure_multiplier",
                "name": "Policy exposure multiplier",
                "detail": "no confirmed policy-scope location match",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "jurisdiction_no_match",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
      },
      {
        "key": "ai_readiness",
        "band": "at_risk",
        "name": "AI Readiness",
        "value": 41,
        "weight": 0,
        "metrics": [
          {
            "key": "ai_agent_context",
            "band": "critical",
            "name": "Agent context & guidance",
            "note": null,
            "notes": [],
            "value": 16,
            "inputs": {
              "has_llms_txt": false,
              "legible_history_share": 0.29,
              "agent_instruction_files": [],
              "agent_instruction_max_bytes": null
            },
            "components": [
              {
                "key": "agent_instructions",
                "name": "Agent instructions",
                "detail": "no CLAUDE.md / AGENTS.md / editor rules",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_instructions",
                    "params": {}
                  }
                ],
                "max_points": 45
              },
              {
                "key": "machine_readable_docs_llms_txt",
                "name": "Machine-readable docs (llms.txt)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              },
              {
                "key": "legible_commit_history",
                "name": "Legible commit history",
                "detail": "29 of 100 human commits state their intent (structured subject or explanatory body)",
                "points": 15.5,
                "status": "partial",
                "details": [
                  {
                    "code": "legible_history",
                    "params": {
                      "legible": 29,
                      "sampled": 100
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "ai_verify_loop",
            "band": "moderate",
            "name": "Verify loop (build / test / typecheck)",
            "note": null,
            "notes": [],
            "value": 56,
            "inputs": {
              "has_nix": false,
              "has_tests": true,
              "lockfiles": [],
              "has_dockerfile": false,
              "typed_language": false,
              "bootstrap_files": [
                "docs/Makefile"
              ],
              "has_devcontainer": false,
              "has_linter_config": true,
              "typecheck_configs": [],
              "agent_commit_share": 0.01,
              "toolchain_manifests": [],
              "dependency_bot_commit_share": 0
            },
            "components": [
              {
                "key": "one_command_bootstrap",
                "name": "One-command bootstrap",
                "detail": "docs/Makefile",
                "points": 18,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "docs/Makefile"
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "automated_tests",
                "name": "Automated tests",
                "detail": null,
                "points": 22,
                "status": "met",
                "details": [],
                "max_points": 22
              },
              {
                "key": "lint_format_config",
                "name": "Lint / format config",
                "detail": null,
                "points": 11,
                "status": "met",
                "details": [],
                "max_points": 11
              },
              {
                "key": "static_type_checking",
                "name": "Static type checking",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "reproducible_environment",
                "name": "Reproducible environment",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              },
              {
                "key": "demonstrated_agent_practice",
                "name": "Demonstrated agent practice",
                "detail": "1 of the last 100 commits agent-authored or agent-credited",
                "points": 2,
                "status": "partial",
                "details": [
                  {
                    "code": "agent_authored_commits",
                    "params": {
                      "count": 1,
                      "sampled": 100
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "automated_maintenance",
                "name": "Automated maintenance",
                "detail": "no automated dependency updates observed",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_dependency_automation",
                    "params": {}
                  }
                ],
                "max_points": 8
              },
              {
                "key": "openssf_scorecard_pinned_dependencies",
                "name": "OpenSSF Scorecard: Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 3",
                "points": 3,
                "status": "partial",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "ai_code_legibility",
            "band": "moderate",
            "name": "Code legibility for models",
            "note": null,
            "notes": [],
            "value": 55,
            "inputs": {
              "primary_language": "Python",
              "largest_source_bytes": 52400,
              "source_files_sampled": 31,
              "oversized_source_files": 0
            },
            "components": [
              {
                "key": "type_checkable_code",
                "name": "Type-checkable code",
                "detail": "Python without a type-check config",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_typecheck_config_language",
                    "params": {
                      "language": "Python"
                    }
                  }
                ],
                "max_points": 45
              },
              {
                "key": "manageable_file_sizes",
                "name": "Manageable file sizes",
                "detail": "0/31 source files over 60KB",
                "points": 55,
                "status": "met",
                "details": [
                  {
                    "code": "oversized_source_files",
                    "params": {
                      "kb": 60,
                      "sampled": 31,
                      "oversized": 0
                    }
                  }
                ],
                "max_points": 55
              }
            ]
          },
          {
            "key": "ai_interfaces",
            "band": "at_risk",
            "name": "Machine-readable interfaces",
            "note": null,
            "notes": [],
            "value": 40,
            "inputs": {
              "example_dirs": [
                "notebooks"
              ],
              "has_mcp_signal": false,
              "api_schema_files": []
            },
            "components": [
              {
                "key": "api_schema_openapi_graphql_proto",
                "name": "API schema (OpenAPI/GraphQL/proto)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 40
              },
              {
                "key": "mcp_server",
                "name": "MCP server",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              },
              {
                "key": "runnable_examples",
                "name": "Runnable examples",
                "detail": "notebooks",
                "points": 40,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "notebooks"
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          }
        ],
        "description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
      }
    ],
    "metrics_version": "1.14.0"
  },
  "warnings": [
    "Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token"
  ],
  "report_type": "repository",
  "generated_at": "2026-07-27T21:43:24.802373Z",
  "schema_version": "0.27.0",
  "badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/s/scverse/muon.svg",
  "full_name": "scverse/muon",
  "license_state": "standard",
  "license_spdx": "BSD-3-Clause"
}

Оцінки — це сигнали, а не гарантії. Вони відображають публічно видимі практики на GitHub — це не аудит коду й не гарантія безпеки.

Відсутні дані виключаються, а ваги перенормовуються — нуль за відсутність ніколи не ставиться. Методологія версіонована й відкрита: метрики v1.14.0, схема v0.27.0 — повна методологія · вікі метрик.

Як окремий результат виглядає на тлі всього реєстру: сукупна статистика.