Registro públicoModerado
Informe de salud del softwareesquema 0.17.0 · métricas 1.13.0 · 2026-07-21 04:20 UTC
cokelaer / bioservices
Access to Biological Web Services from Python.
cokelaer/bioservices tiene un índice de salud de 64 sobre 100, lo que lo sitúa en la banda Moderado. Su puntuación más alta es Engineering Quality (86/100) y la más baja, AI Readiness (39/100). Se actualizó por última vez hace 38 días. Una sola persona concentra la mayor parte del trabajo reciente.
64
global / 100Índice de salud del software
Las métricas se agrupan en categorías ponderadas sobre una escala de 1 a 100. El resultado global parte de su media; cuando la evidencia pública activa la Política de Jurisdicciones de Alto Riesgo, la calificación se ajusta y recibe el límite 49 (En riesgo). Preparación para IA queda fuera.
64
Excelente85-100Ejemplar; cumple prácticamente todos los criterios evaluados
Bueno70-84Saludable; carencias menores
Moderado50-69Aceptable con carencias notables; se recomienda revisión
En riesgo30-49Debilidades significativas; su adopción exige cautela
Crítico1-29Problemas graves (proyecto abandonado, un solo mantenedor, sin higiene)
Perfil de puntuación
Cada eje es una categoría. La forma importa más que la media: un proyecto sano llena toda la figura, mientras que un perfil de picos y cráteres indica que la fortaleza en una dimensión enmascara el riesgo en otra.
Titularidad
Thomas CokelaerCuenta personal
170 seguidores74 repositorios públicosdesde may 2011Institut Pasteur
Este repositorio pertenece a una cuenta personal. Un proyecto con un único propietario conlleva más riesgo de continuidad que uno respaldado por una organización.
Ecosistemas de paquetes
| Registro | Paquete | Versión | Descargas / mes | Versiones | Última publicación | Etiquetas |
|---|---|---|---|---|---|---|
| PyPI | bioservices | 1.16.0 | 36.133 | 79 | hace 115 días | bioserviceswebservicesbiologychebiunichemkeggbiomodelseutilsuniprotpicrarrayexpressmusclequickgopdbblastbiomartpantherdbmiriamgeneprofchemblchemspiderhgncpathwaycommonsrheaensembl |
Métricas por categoría
Vitalidad
¿Está vivo el proyecto: se escribe código y se publican versiones?
57
Actividad de desarrollo
46En riesgo
Cómo se puntúa
| 18/36 | Recencia de push — último push hace 38 días |
| 9/36 | Cadencia de commits — 13/52 semanas con commits |
| 18/18 | Volumen de commits — 260 commits en el último año |
| 1/10 | OpenSSF Scorecard: Maintained — 2 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 1 |
Datos de entrada utilizados
| commits_last_year | 260 |
| human_commit_share | — |
| days_since_last_push | 38 |
| active_weeks_last_year | 13 |
Disciplina de publicación
74Bueno
Cómo se puntúa
| 27/27 | Publica versiones — 27 versiones publicadas |
| 27/36 | Recencia de las versiones — última versión hace 115 días |
| 12.6/27 | Cadencia de publicación — una versión cada ~141 días |
| 0/10 | OpenSSF Scorecard: Signed-Releases — sin datos |
Datos de entrada utilizados
| releases_count | 27 |
| latest_release_tag | v1.16.0 |
| releases_from_tags | no |
| days_since_latest_release | 115 |
| mean_days_between_releases | 141 |
Excluidos de la puntuación (sin datos o no aplicable): OpenSSF Scorecard: Signed-Releases. Los pesos restantes se han renormalizado.
Comunidad y Adopción
¿Tiene el proyecto usuarios, descargas, atención y unas condiciones acogedoras para quienes contribuyen?
60
Popularidad y adopción
63Moderado
Cómo se puntúa
| 41/60 | Estrellas — 340 estrellas |
| 15.3/25 | Forks — 69 forks |
| 6.5/15 | Observadores — 16 observadores |
Datos de entrada utilizados
| forks | 69 |
| stars | 340 |
| watchers | 16 |
| growth_state | organic |
| growth_factor_pct | 100 |
Salud de la comunidad
44En riesgo
Cómo se puntúa
| 22.5/22.5 | README |
| 16.9/22.5 | Licencia — archivo de licencia presente, no es una licencia reconocida |
| 0/18 | Guía CONTRIBUTING |
| 0/13.5 | Código de conducta |
| 0/7.2 | Plantilla de issues |
| 0/6.3 | Plantilla de PR |
Datos de entrada utilizados
| has_readme | sí |
| has_license | sí |
| has_contributing | no |
| has_issue_template | no |
| has_code_of_conduct | no |
| has_pull_request_template | no |
Cómo se puntúa
| 60.8/80 | Descargas mensuales — 36.133 descargas/mes en pypi |
| 0/20 | Dependientes en el registro — no lo informa este ecosistema |
Datos de entrada utilizados
| packages | bioservices |
| dependents | — |
| ecosystems | pypi |
| total_downloads | — |
| monthly_downloads | 36.133 |
Excluidos de la puntuación (sin datos o no aplicable): Dependientes en el registro. Los pesos restantes se han renormalizado.
Sostenibilidad y Gobernanza
¿Sobrevivirá el proyecto a sus personas: factor bus, capacidad de respuesta, quién lo respalda y mantenimiento del paquete?
67
Resiliencia de mantenedores (factor bus)
36En riesgo
Cómo se puntúa
| 9/54 | Factor bus — la mitad de los commits recae en 1 contribuyente(s) |
| 3.7/22.5 | Distribución de commits — el principal contribuyente firma el 84% de los commits |
| 13.5/13.5 | Amplitud de contribuyentes — 27 contribuyentes |
| 10/10 | OpenSSF Scorecard: Contributors — project has 3 contributing companies or organizations -- score normalized to 10 |
Datos de entrada utilizados
| bus_factor | 1 |
| contributors_sampled | 27 |
| top_contributor_share | 0,836 |
Cómo se puntúa
| 46.1/46.8 | Resolución de issues — 99% de issues cerradas |
| 33/38.3 | Aceptación de PR — 112/130 PR decididos fusionados |
| 0/15 | OpenSSF Scorecard: Code-Review — Found 1/13 approved changesets -- score normalized to 0 |
Datos de entrada utilizados
| merged_prs | 112 |
| open_issues | 3 |
| closed_issues | 214 |
| issue_closed_ratio | 0,986 |
| closed_unmerged_prs | 18 |
Propiedad y custodia
64Moderado
Cómo se puntúa
| 10/30 | Respaldo de la propiedad — cuenta personal (usuario) |
| 0/20 | Dominio verificado — no aplicable a cuentas de usuario |
| 16.1/25 | Alcance del propietario — 170 seguidores de cokelaer |
| 25/25 | Trayectoria — 74 repos públicos, cuenta de ~15 años |
Datos de entrada utilizados
| followers | 170 |
| owner_type | User |
| is_verified | — |
| owner_login | cokelaer |
| public_repos | 74 |
| account_age_days | 5550 |
Excluidos de la puntuación (sin datos o no aplicable): Dominio verificado. Los pesos restantes se han renormalizado.
Mantenimiento de paquetes
100Excelente
Cómo se puntúa
| 25/25 | Publicado y resoluble — 1 paquete(s) en pypi |
| 35/35 | Recencia de publicación — última publicación hace 115 días |
| 20/20 | Historial de versiones — 79 versiones en el registro |
| 20/20 | No obsoleto — activo, ni obsoleto ni retirado |
Datos de entrada utilizados
| packages | bioservices |
| ecosystems | pypi |
| any_deprecated | no |
| min_days_since_publish | 115 |
Calidad de Ingeniería
¿Existen unas prácticas mínimas de ingeniería y documentación?
86
Prácticas de ingeniería
76Bueno
Cómo se puntúa
| 24/24 | Flujos de trabajo de CI — 46 flujo(s) de trabajo |
| 24/24 | Pruebas presentes |
| 16/16 | Configuración de linter |
| 9.6/9.6 | Hooks de pre-commit |
| 0/6.4 | .editorconfig |
| 2/20 | OpenSSF Scorecard: CI-Tests — 1 out of 7 merged PRs checked by a CI test -- score normalized to 1 |
Datos de entrada utilizados
| has_ci | sí |
| has_tests | sí |
| has_editorconfig | no |
| has_linter_config | sí |
| has_precommit_config | sí |
Documentación
100Excelente
Cómo se puntúa
| 30/30 | README |
| 25/25 | Directorio de documentación |
| 15/15 | Sitio de documentación / página del proyecto — http://bioservices.readthedocs.io |
| 10/10 | Descripción del repositorio |
| 10/10 | Topics — 11 topics |
| 10/10 | Wiki |
Datos de entrada utilizados
| topics | kegg, unichem, eutils, chembl, chebi, biomodels, quickgo, uniprot, wikipathways, muscle, python |
| has_wiki | sí |
| homepage | http://bioservices.readthedocs.io |
| has_readme | sí |
| has_docs_dir | sí |
| has_description | sí |
Seguridad
¿Son sólidas las prácticas visibles de seguridad y de cadena de suministro, sin exposición jurisdiccional de alto riesgo sin resolver?
44
Postura de seguridad
37En riesgo
Cómo se puntúa
| 7.5/7.5 | Binary-Artifacts — no binaries found in the repo |
| 0/7.5 | Branch-Protection — branch protection not enabled on development/release branches |
| 0.2/2.5 | CI-Tests — 1 out of 7 merged PRs checked by a CI test -- score normalized to 1 |
| 0.5/2.5 | CII-Best-Practices — badge detected: InProgress |
| 0/7.5 | Code-Review — Found 1/13 approved changesets -- score normalized to 0 |
| 2.5/2.5 | Contributors — project has 3 contributing companies or organizations -- score normalized to 10 |
| 10/10 | Dangerous-Workflow — no dangerous workflow patterns detected |
| 7.5/7.5 | Dependency-Update-Tool — update tool detected |
| 0/5 | Fuzzing — project is not fuzzed |
| 2.2/2.5 | Licencia — license file detected |
| 0.8/7.5 | Maintained — 2 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 1 |
| 5/5 | Packaging — packaging workflow detected |
| 0/5 | Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
| 0/5 | SAST — SAST tool is not run on all commits -- score normalized to 0 |
| 0/5 | Security-Policy — security policy file not detected |
| 0/7.5 | Signed-Releases — sin datos |
| 0/7.5 | Token-Permissions — detected GitHub workflow tokens with excessive permissions |
| 0/7.5 | Vulnerabilities — 18 existing vulnerabilities detected |
Datos de entrada utilizados
| source | openssf_scorecard |
| checks_evaluated | 17 |
| scorecard_version | v5.5.0 |
| checks_inconclusive | 1 |
| scorecard_aggregate | 3,7 |
Excluidos de la puntuación (sin datos o no aplicable): signed_releases. Los pesos restantes se han renormalizado.
Avisos de dependencias
73Bueno
Cómo se puntúa
| 14/35 | Dependencias directas libres de avisos conocidos — 1 afectados: lxml 5.4.0 (high 7.5) |
| 25/25 | Dependencias indirectas libres de avisos conocidos — ninguna dependencia indirecta tiene un aviso conocido |
| 33.7/40 | Sin avisos pendientes — 1 paquete(s) con avisos sin atender más allá de 90 días; el más antiguo publicado hace 90 días |
Datos de entrada utilizados
| source | osv |
| advisories | 2 |
| affected_packages | 1 |
| assessed_packages | 47 |
| unassessed_packages | 0 |
| affected_by_severity | high 1 |
| direct_affected_packages | 1 |
Se cotejó el cierre de dependencias en tiempo de ejecución de pypi:bioservices@1.16.0 —lo que arrastra la instalación del paquete publicado—: 47 paquetes. No se analiza la alcanzabilidad.
Preparación para IA
¿Hasta qué punto está el repositorio preparado para desarrollarse y mantenerse con agentes de codificación de IA? Es una insignia independiente y experimental — peso 0,0, de modo que se presenta por separado y no afecta a la puntuación de salud global.
39
Contexto y guía para agentes
1Crítico
Cómo se puntúa
| 0/45 | Instrucciones para agentes — sin CLAUDE.md / AGENTS.md / reglas de editor |
| 0/15 | Documentación legible por máquinas (llms.txt) |
| 0/40 | Historial de commits legible — sin datos |
Datos de entrada utilizados
| has_llms_txt | no |
| legible_history_share | — |
| agent_instruction_files | — |
| agent_instruction_max_bytes | — |
Excluidos de la puntuación (sin datos o no aplicable): Historial de commits legible. Los pesos restantes se han renormalizado.
Cómo se puntúa
| 18/18 | Arranque con un solo comando — doc/Makefile |
| 22/22 | Pruebas automatizadas |
| 11/11 | Configuración de lint / formato |
| 0/11 | Verificación estática de tipos |
| 0/10 | Entorno reproducible |
| 0/10 | Práctica demostrada con agentes — sin datos |
| 0/8 | Mantenimiento automatizado — sin datos |
| 0/10 | OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
Datos de entrada utilizados
| has_nix | no |
| has_tests | sí |
| lockfiles | — |
| has_dockerfile | no |
| typed_language | no |
| bootstrap_files | doc/Makefile |
| has_devcontainer | no |
| has_linter_config | sí |
| typecheck_configs | — |
| agent_commit_share | — |
| toolchain_manifests | — |
| dependency_bot_commit_share | — |
Excluidos de la puntuación (sin datos o no aplicable): Práctica demostrada con agentes, Mantenimiento automatizado. Los pesos restantes se han renormalizado.
Legibilidad del código para modelos
54Moderado
Cómo se puntúa
| 0/45 | Código verificable por tipos — Python sin configuración de verificación de tipos |
| 53.7/55 | Tamaños de archivo manejables — 3/127 archivos fuente de más de 60 KB |
Datos de entrada utilizados
| primary_language | Python |
| largest_source_bytes | 67.753 |
| source_files_sampled | 127 |
| oversized_source_files | 3 |
Interfaces legibles por máquina
40En riesgo
Cómo se puntúa
| 0/40 | Esquema de API (OpenAPI/GraphQL/proto) |
| 0/20 | Servidor MCP |
| 40/40 | Ejemplos ejecutables — examples, notebooks |
Datos de entrada utilizados
| example_dirs | examples, notebooks |
| has_mcp_signal | no |
| api_schema_files | — |
Datos clave
340estrellas de GitHub
27contribuidores
260commits en los últimos 12 meses
38días desde el último push
27versiones publicadas
1factor bus
3issues abiertas
PyPIecosistemas de paquetes
Más detalle
Historial de estrellas y forks 340 ★ / 0 ⇿
340Estrellas
Cuándo se añadió cada estrella y fork, recopilado de GitHub y agrupado por día. El crecimiento acumulado se sitúa justo encima de las adiciones diarias que lo componen, de modo que ambos se leen en conjunto: la acumulación orgánica sostenida no se parece en nada a un pico abrupto y efímero. Cuando esa diferencia es medible, se informa como autenticidad del crecimiento.
Cada punto abarca 11 días.
OpenSSF Scorecard 3.7 / 10
3.7agregado
Evaluación de seguridad independiente y agnóstica en cuanto a herramientas, procedente del proyecto de código abierto OpenSSF Scorecard. Cada comprobación premia una práctica de seguridad, no la herramienta de un proveedor concreto. Las comprobaciones que Scorecard no pudo determinar se marcan como n/d y se excluyen de la puntuación de seguridad (nunca se cuentan como cero).
| 10 | Binary-Artifacts | no binaries found in the repo |
| 0 | Branch-Protection | branch protection not enabled on development/release branches |
| 1 | CI-Tests | 1 out of 7 merged PRs checked by a CI test -- score normalized to 1 |
| 2 | CII-Best-Practices | badge detected: InProgress |
| 0 | Code-Review | Found 1/13 approved changesets -- score normalized to 0 |
| 10 | Contributors | project has 3 contributing companies or organizations -- score normalized to 10 |
| 10 | Dangerous-Workflow | no dangerous workflow patterns detected |
| 10 | Dependency-Update-Tool | update tool detected |
| 0 | Fuzzing | project is not fuzzed |
| 9 | License | license file detected |
| 1 | Maintained | 2 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 1 |
| 10 | Packaging | packaging workflow detected |
| 0 | Pinned-Dependencies | dependency not pinned by hash detected -- score normalized to 0 |
| 0 | SAST | SAST tool is not run on all commits -- score normalized to 0 |
| 0 | Security-Policy | security policy file not detected |
| n/d | Signed-Releases | no releases found |
| 0 | Token-Permissions | detected GitHub workflow tokens with excessive permissions |
| 0 | Vulnerabilities | 18 existing vulnerabilities detected |
Dependencias directas 16
| Registro | Paquete | Restricción de versión | Manifiesto |
|---|---|---|---|
| PyPI | click | (>=8.1.8,<9.0.0) | pyproject.toml |
| PyPI | appdirs | (>=1.4.4,<2.0.0) | pyproject.toml |
| PyPI | matplotlib | (>=3.9) | pyproject.toml |
| PyPI | easydev | (>=0.13.3,<0.14.0) | pyproject.toml |
| PyPI | tqdm | (>=4.67.1,<5.0.0) | pyproject.toml |
| PyPI | rich-click | (>=1.8.5,<2.0.0) | pyproject.toml |
| PyPI | colorlog | (>=6.9.0,<7.0.0) | pyproject.toml |
| PyPI | beautifulsoup4 | (>=4.12.3,<5.0.0) | pyproject.toml |
| PyPI | grequests | (>=0.7.0,<0.8.0) | pyproject.toml |
| PyPI | requests | (>=2.32.3,<3.0.0) | pyproject.toml |
| PyPI | lxml | (>=5.3.0,<7.0.0) | pyproject.toml |
| PyPI | requests-cache | (>=1.2.1,<2.0.0) | pyproject.toml |
| PyPI | wrapt | (>=1.17.2,<2.0.0) | pyproject.toml |
| PyPI | xmltodict | (>=0.14.2,<0.15.0) | pyproject.toml |
| PyPI | pandas | (>2.2) | pyproject.toml |
| PyPI | numpy | (>=1.23.2,<=2.4) | pyproject.toml |
Todas las dependencias 126
Conjunto completo de dependencias resueltas según el grafo de dependencias de GitHub: 16 paquetes directos y 110 indirectos (transitivos). El cierre transitivo es completo cuando el repositorio incluye un lockfile.
| Registro | Paquete | Versión | Relación |
|---|---|---|---|
| PyPI | appdirs | 1.4.4 | directa |
| PyPI | beautifulsoup4 | 4.15.0 | directa |
| PyPI | click | 8.1.8 | directa |
| PyPI | colorlog | 6.10.1 | directa |
| PyPI | easydev | 0.13.3 | directa |
| PyPI | grequests | 0.7.0 | directa |
| PyPI | lxml | 6.1.1 | directa |
| PyPI | matplotlib | 3.9.4 | directa |
| PyPI | numpy | 2.0.2 | directa |
| PyPI | pandas | 2.3.3 | directa |
| PyPI | requests | 2.32.5 | directa |
| PyPI | requests-cache | 1.3.2 | directa |
| PyPI | rich-click | 1.9.8 | directa |
| PyPI | tqdm | 4.68.2 | directa |
| PyPI | wrapt | 1.17.3 | directa |
| PyPI | xmltodict | 0.14.2 | directa |
| PyPI | alabaster | 0.7.16 | indirecta |
| PyPI | appnope | 0.1.4 | indirecta |
| PyPI | asttokens | 3.0.1 | indirecta |
| PyPI | attrs | 26.1.0 | indirecta |
| PyPI | babel | 2.18.0 | indirecta |
| PyPI | cattrs | 25.3.0 | indirecta |
| PyPI | certifi | 2026.5.20 | indirecta |
| PyPI | cffi | 2.0.0 | indirecta |
| PyPI | charset-normalizer | 3.4.7 | indirecta |
| PyPI | colorama | 0.4.6 | indirecta |
| PyPI | comm | 0.2.3 | indirecta |
| PyPI | contourpy | 1.3.0 | indirecta |
| PyPI | coverage | 6.5.0 | indirecta |
| PyPI | coveralls | 3.3.1 | indirecta |
| PyPI | cycler | 0.12.1 | indirecta |
| PyPI | debugpy | 1.8.21 | indirecta |
| PyPI | decorator | 5.3.1 | indirecta |
| PyPI | docopt | 0.6.2 | indirecta |
| PyPI | docutils | 0.20.1 | indirecta |
| PyPI | exceptiongroup | 1.3.1 | indirecta |
| PyPI | execnet | 2.1.2 | indirecta |
| PyPI | executing | 2.2.1 | indirecta |
| PyPI | fastjsonschema | 2.21.2 | indirecta |
| PyPI | flaky | 3.8.1 | indirecta |
| PyPI | fonttools | 4.60.2 | indirecta |
| PyPI | gevent | 26.5.0 | indirecta |
| PyPI | greenlet | 3.2.5 | indirecta |
| PyPI | idna | 3.18 | indirecta |
| PyPI | imagesize | 1.5.0 | indirecta |
| PyPI | importlib-metadata | 8.7.1 | indirecta |
| PyPI | importlib-resources | 6.5.2 | indirecta |
| PyPI | iniconfig | 2.1.0 | indirecta |
| PyPI | ipykernel | 6.31.0 | indirecta |
| PyPI | ipython | 8.18.1 | indirecta |
| PyPI | ipython-pygments-lexers | 1.1.1 | indirecta |
| PyPI | jedi | 0.19.2 | indirecta |
| PyPI | jinja2 | 3.1.6 | indirecta |
| PyPI | jsonschema | 4.25.1 | indirecta |
| PyPI | jsonschema-specifications | 2025.9.1 | indirecta |
| PyPI | jupyter-client | 8.6.3 | indirecta |
| PyPI | jupyter-core | 5.8.1 | indirecta |
| PyPI | kiwisolver | 1.4.7 | indirecta |
| PyPI | line-profiler | 4.2.0 | indirecta |
| PyPI | markdown-it-py | 3.0.0 | indirecta |
| PyPI | markupsafe | 3.0.3 | indirecta |
| PyPI | matplotlib-inline | 0.2.2 | indirecta |
| PyPI | mdurl | 0.1.2 | indirecta |
| PyPI | nbclient | 0.10.2 | indirecta |
| PyPI | nbformat | 5.10.4 | indirecta |
| PyPI | nbmake | 1.5.5 | indirecta |
| PyPI | nest-asyncio | 1.6.0 | indirecta |
| PyPI | nest-asyncio2 | 1.7.2 | indirecta |
| PyPI | numpydoc | — | indirecta |
| PyPI | packaging | 26.2 | indirecta |
| PyPI | parso | 0.8.7 | indirecta |
| PyPI | pexpect | 4.9.0 | indirecta |
| PyPI | pillow | — | indirecta |
| PyPI | pillow | 11.3.0 | indirecta |
| PyPI | platformdirs | 4.4.0 | indirecta |
| PyPI | pluggy | 1.6.0 | indirecta |
| PyPI | prompt-toolkit | 3.0.52 | indirecta |
| PyPI | psutil | 7.2.2 | indirecta |
| PyPI | ptyprocess | 0.7.0 | indirecta |
| PyPI | pure-eval | 0.2.3 | indirecta |
| PyPI | pycparser | 2.23 | indirecta |
| PyPI | pygments | 2.20.0 | indirecta |
| PyPI | pyparsing | 3.3.2 | indirecta |
| PyPI | pytest | 8.4.2 | indirecta |
| PyPI | pytest-cov | 4.1.0 | indirecta |
| PyPI | pytest-mock | 3.15.1 | indirecta |
| PyPI | pytest-runner | 6.0.1 | indirecta |
| PyPI | pytest-timeout | 2.4.0 | indirecta |
| PyPI | pytest-xdist | 3.8.0 | indirecta |
| PyPI | python-dateutil | 2.9.0.post0 | indirecta |
| PyPI | pytz | 2026.2 | indirecta |
| PyPI | pywin32 | 312 | indirecta |
| PyPI | pyzmq | 27.1.0 | indirecta |
| PyPI | referencing | 0.36.2 | indirecta |
| PyPI | rich | 15.0.0 | indirecta |
| PyPI | rpds-py | 0.27.1 | indirecta |
| PyPI | setuptools | 82.0.1 | indirecta |
| PyPI | six | 1.17.0 | indirecta |
| PyPI | snowballstemmer | 3.1.1 | indirecta |
| PyPI | soupsieve | 2.8.4 | indirecta |
| PyPI | sphinx | — | indirecta |
| PyPI | sphinx | 7.4.7 | indirecta |
| PyPI | sphinx-copybutton | — | indirecta |
| PyPI | sphinx-gallery | — | indirecta |
| PyPI | sphinx-gallery | 0.15.0 | indirecta |
| PyPI | sphinx-rtd-theme | — | indirecta |
| PyPI | sphinx-rtd-theme | 2.0.0 | indirecta |
| PyPI | sphinxcontrib-applehelp | 2.0.0 | indirecta |
| PyPI | sphinxcontrib-devhelp | 2.0.0 | indirecta |
| PyPI | sphinxcontrib-htmlhelp | 2.1.0 | indirecta |
| PyPI | sphinxcontrib-jquery | 4.1 | indirecta |
| PyPI | sphinxcontrib-jsmath | 1.0.1 | indirecta |
| PyPI | sphinxcontrib-qthelp | 2.0.0 | indirecta |
| PyPI | sphinxcontrib-serializinghtml | 2.0.0 | indirecta |
| PyPI | stack-data | 0.6.3 | indirecta |
| PyPI | tomli | 2.4.1 | indirecta |
| PyPI | tornado | 6.5.7 | indirecta |
| PyPI | traitlets | 5.15.1 | indirecta |
| PyPI | typing-extensions | 4.15.0 | indirecta |
| PyPI | tzdata | 2026.2 | indirecta |
| PyPI | url-normalize | 2.2.1 | indirecta |
| PyPI | urllib3 | 2.6.3 | indirecta |
| PyPI | wcwidth | 0.8.1 | indirecta |
| PyPI | zipp | 3.23.1 | indirecta |
| PyPI | zope-event | 6.0 | indirecta |
| PyPI | zope-interface | 8.0.1 | indirecta |
Avisos de dependencias 1
Instalar pypi:bioservices@1.16.0 arrastra 47 paquetes, directos y transitivos: 1 tienen avisos conocidos, de los cuales 1 son dependencias directas.
| Paquete | Versión | Relación | Gravedad | Avisos | Corregido en |
|---|---|---|---|---|---|
| lxml | 5.4.0 | directa | alta | 2 | 6.1.0 |
Un aviso significa que la versión registrada en el grafo de dependencias cae dentro del rango afectado de un aviso. No se analiza la alcanzabilidad, y el grafo incluye fijaciones de desarrollo y prueba: un hallazgo puede referirse al utillaje y no al software distribuido.
Informe JSON sin procesar legible por máquina
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{
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"bigg.yml",
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"biodbnet.yml",
"biomart.yml",
"biomodels.yml",
"chebi.yml",
"chembl.yml",
"ci.yml",
"cog.yml",
"dbfetch.yml",
"ena.yml",
"ensembl.yml",
"eutils.yml",
"eva.yml",
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"muscle.yml",
"mygeneinfo.yml",
"ncbiblast.yml",
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{
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{
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{
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{
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},
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},
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]
},
{
"key": "stewardship",
"band": "moderate",
"name": "Ownership & stewardship",
"note": "Excluded from scoring (no data or not applicable): Verified domain. Remaining weights renormalized.",
"notes": [
{
"code": "excluded_no_data",
"params": {
"components": [
"verified_domain"
]
}
},
{
"code": "weights_renormalized",
"params": {}
}
],
"value": 64,
"inputs": {
"followers": 170,
"owner_type": "User",
"is_verified": null,
"owner_login": "cokelaer",
"public_repos": 74,
"account_age_days": 5550
},
"components": [
{
"key": "ownership_backing",
"name": "Ownership backing",
"detail": "personal (user) account",
"points": 10,
"status": "partial",
"details": [
{
"code": "owner_personal",
"params": {}
}
],
"max_points": 30
},
{
"key": "verified_domain",
"name": "Verified domain",
"detail": "not applicable to user accounts",
"points": 0,
"status": "excluded",
"details": [
{
"code": "not_applicable_to_user_accounts",
"params": {}
}
],
"max_points": 20
},
{
"key": "owner_reach",
"name": "Owner reach",
"detail": "170 followers of cokelaer",
"points": 16.1,
"status": "partial",
"details": [
{
"code": "owner_followers",
"params": {
"count": 170,
"login": "cokelaer"
}
}
],
"max_points": 25
},
{
"key": "track_record",
"name": "Track record",
"detail": "74 public repos, account ~15 yr old",
"points": 25,
"status": "met",
"details": [
{
"code": "public_repos",
"params": {
"count": 74
}
},
{
"code": "account_age_years",
"params": {
"years": 15
}
}
],
"max_points": 25
}
]
},
{
"key": "package_maintenance",
"band": "excellent",
"name": "Package maintenance",
"note": null,
"notes": [],
"value": 100,
"inputs": {
"packages": [
"bioservices"
],
"ecosystems": "pypi",
"any_deprecated": false,
"min_days_since_publish": 115
},
"components": [
{
"key": "published_resolvable",
"name": "Published & resolvable",
"detail": "1 package(s) on pypi",
"points": 25,
"status": "met",
"details": [
{
"code": "packages_published",
"params": {
"count": 1,
"ecosystems": "pypi"
}
}
],
"max_points": 25
},
{
"key": "publish_recency",
"name": "Publish recency",
"detail": "latest publish 115 days ago",
"points": 35,
"status": "met",
"details": [
{
"code": "publish_recency",
"params": {
"days": 115
}
}
],
"max_points": 35
},
{
"key": "version_history",
"name": "Version history",
"detail": "79 published versions",
"points": 20,
"status": "met",
"details": [
{
"code": "published_versions",
"params": {
"count": 79
}
}
],
"max_points": 20
},
{
"key": "not_deprecated",
"name": "Not deprecated",
"detail": "active, not deprecated or yanked",
"points": 20,
"status": "met",
"details": [
{
"code": "package_not_deprecated",
"params": {}
}
],
"max_points": 20
}
]
}
],
"description": "Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?"
},
{
"key": "engineering",
"band": "excellent",
"name": "Engineering Quality",
"value": 86,
"weight": 0.2,
"metrics": [
{
"key": "engineering_practices",
"band": "good",
"name": "Engineering practices",
"note": null,
"notes": [],
"value": 76,
"inputs": {
"has_ci": true,
"has_tests": true,
"has_editorconfig": false,
"has_linter_config": true,
"has_precommit_config": true
},
"components": [
{
"key": "ci_workflows",
"name": "CI workflows",
"detail": "46 workflow(s)",
"points": 24,
"status": "met",
"details": [
{
"code": "ci_workflows",
"params": {
"count": 46
}
}
],
"max_points": 24
},
{
"key": "tests_present",
"name": "Tests present",
"detail": null,
"points": 24,
"status": "met",
"details": [],
"max_points": 24
},
{
"key": "linter_config",
"name": "Linter config",
"detail": null,
"points": 16,
"status": "met",
"details": [],
"max_points": 16
},
{
"key": "pre_commit_hooks",
"name": "Pre-commit hooks",
"detail": null,
"points": 9.6,
"status": "met",
"details": [],
"max_points": 9.6
},
{
"key": "editorconfig",
"name": ".editorconfig",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 6.4
},
{
"key": "openssf_scorecard_ci_tests",
"name": "OpenSSF Scorecard: CI-Tests",
"detail": "1 out of 7 merged PRs checked by a CI test -- score normalized to 1",
"points": 2,
"status": "partial",
"details": [],
"max_points": 20
}
]
},
{
"key": "documentation",
"band": "excellent",
"name": "Documentation",
"note": null,
"notes": [],
"value": 100,
"inputs": {
"topics": [
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"unichem",
"eutils",
"chembl",
"chebi",
"biomodels",
"quickgo",
"uniprot",
"wikipathways",
"muscle",
"python"
],
"has_wiki": true,
"homepage": "http://bioservices.readthedocs.io",
"has_readme": true,
"has_docs_dir": true,
"has_description": true
},
"components": [
{
"key": "readme",
"name": "README",
"detail": null,
"points": 30,
"status": "met",
"details": [],
"max_points": 30
},
{
"key": "documentation_directory",
"name": "Documentation directory",
"detail": null,
"points": 25,
"status": "met",
"details": [],
"max_points": 25
},
{
"key": "documentation_homepage_site",
"name": "Documentation / homepage site",
"detail": "http://bioservices.readthedocs.io",
"points": 15,
"status": "met",
"details": [],
"max_points": 15
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{
"key": "repository_description",
"name": "Repository description",
"detail": null,
"points": 10,
"status": "met",
"details": [],
"max_points": 10
},
{
"key": "topics",
"name": "Topics",
"detail": "11 topics",
"points": 10,
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"details": [
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"code": "topics_count",
"params": {
"count": 11
}
}
],
"max_points": 10
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{
"key": "wiki",
"name": "Wiki",
"detail": null,
"points": 10,
"status": "met",
"details": [],
"max_points": 10
}
]
}
],
"description": "Are baseline engineering and documentation practices in place?"
},
{
"key": "security",
"band": "at_risk",
"name": "Security",
"value": 44,
"weight": 0.16,
"metrics": [
{
"key": "security_posture",
"band": "at_risk",
"name": "Security posture",
"note": "Excluded from scoring (no data or not applicable): Signed-Releases. Remaining weights renormalized.",
"notes": [
{
"code": "excluded_no_data",
"params": {
"components": [
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]
}
},
{
"code": "weights_renormalized",
"params": {}
}
],
"value": 37,
"inputs": {
"source": "openssf_scorecard",
"checks_evaluated": 17,
"scorecard_version": "v5.5.0",
"checks_inconclusive": 1,
"scorecard_aggregate": 3.7
},
"components": [
{
"key": "binary_artifacts",
"name": "Binary-Artifacts",
"detail": "no binaries found in the repo",
"points": 7.5,
"status": "met",
"details": [],
"max_points": 7.5
},
{
"key": "branch_protection",
"name": "Branch-Protection",
"detail": "branch protection not enabled on development/release branches",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
},
{
"key": "ci_tests",
"name": "CI-Tests",
"detail": "1 out of 7 merged PRs checked by a CI test -- score normalized to 1",
"points": 0.2,
"status": "partial",
"details": [],
"max_points": 2.5
},
{
"key": "cii_best_practices",
"name": "CII-Best-Practices",
"detail": "badge detected: InProgress",
"points": 0.5,
"status": "partial",
"details": [],
"max_points": 2.5
},
{
"key": "code_review",
"name": "Code-Review",
"detail": "Found 1/13 approved changesets -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
},
{
"key": "contributors",
"name": "Contributors",
"detail": "project has 3 contributing companies or organizations -- score normalized to 10",
"points": 2.5,
"status": "met",
"details": [],
"max_points": 2.5
},
{
"key": "dangerous_workflow",
"name": "Dangerous-Workflow",
"detail": "no dangerous workflow patterns detected",
"points": 10,
"status": "met",
"details": [],
"max_points": 10
},
{
"key": "dependency_update_tool",
"name": "Dependency-Update-Tool",
"detail": "update tool detected",
"points": 7.5,
"status": "met",
"details": [],
"max_points": 7.5
},
{
"key": "fuzzing",
"name": "Fuzzing",
"detail": "project is not fuzzed",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "license",
"name": "License",
"detail": "license file detected",
"points": 2.2,
"status": "partial",
"details": [],
"max_points": 2.5
},
{
"key": "maintained",
"name": "Maintained",
"detail": "2 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 1",
"points": 0.8,
"status": "partial",
"details": [],
"max_points": 7.5
},
{
"key": "packaging",
"name": "Packaging",
"detail": "packaging workflow detected",
"points": 5,
"status": "met",
"details": [],
"max_points": 5
},
{
"key": "pinned_dependencies",
"name": "Pinned-Dependencies",
"detail": "dependency not pinned by hash detected -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "sast",
"name": "SAST",
"detail": "SAST tool is not run on all commits -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "security_policy",
"name": "Security-Policy",
"detail": "security policy file not detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 5
},
{
"key": "signed_releases",
"name": "Signed-Releases",
"detail": "no releases found",
"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
"params": {}
}
],
"max_points": 7.5
},
{
"key": "token_permissions",
"name": "Token-Permissions",
"detail": "detected GitHub workflow tokens with excessive permissions",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
},
{
"key": "vulnerabilities",
"name": "Vulnerabilities",
"detail": "18 existing vulnerabilities detected",
"points": 0,
"status": "missed",
"details": [],
"max_points": 7.5
}
]
},
{
"key": "dependency_advisories",
"band": "good",
"name": "Dependency advisories",
"note": "Matched the pypi:bioservices@1.16.0 runtime dependency closure — what installing the published package pulls in — 47 packages. Reachability is not analyzed.",
"notes": [
{
"code": "advisories_scope_published",
"params": {
"package": "pypi:bioservices@1.16.0",
"assessed": 47
}
},
{
"code": "advisories_reachability",
"params": {}
}
],
"value": 73,
"inputs": {
"source": "osv",
"advisories": 2,
"affected_packages": 1,
"assessed_packages": 47,
"unassessed_packages": 0,
"affected_by_severity": "high 1",
"direct_affected_packages": 1
},
"components": [
{
"key": "direct_dependencies_free_of_known_advisories",
"name": "Direct dependencies free of known advisories",
"detail": "1 affected: lxml 5.4.0 (high 7.5)",
"points": 14,
"status": "partial",
"details": [
{
"code": "advisories_affected",
"params": {
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"packages": "lxml 5.4.0 (high 7.5)"
}
}
],
"max_points": 35
},
{
"key": "indirect_dependencies_free_of_known_advisories",
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"points": 25,
"status": "met",
"details": [
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"code": "no_indirect_advisories",
"params": {}
}
],
"max_points": 25
},
{
"key": "no_advisories_left_outstanding",
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"points": 33.7,
"status": "partial",
"details": [
{
"code": "advisories_stale",
"params": {
"days": 90,
"count": 1,
"oldest": 90
}
}
],
"max_points": 40
}
]
},
{
"key": "malicious_dependencies",
"band": "excellent",
"name": "Malicious dependencies",
"note": null,
"notes": [],
"value": 100,
"inputs": {
"source": "osv",
"meaning": "reported as a malicious package by the OpenSSF corpus; the remedy is removal or moving off the compromised name, never an upgrade of the same artifact. Versions the registry has since pulled are listed but not scored",
"packages": [],
"red_flag": false,
"assessed_packages": 47,
"malicious_packages": 0,
"direct_malicious_packages": 0,
"withdrawn_malicious_packages": 0,
"installable_malicious_packages": 0
},
"components": [
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"key": "no_dependency_reported_as_a_malicious_package",
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"points": 100,
"status": "met",
"details": [
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"code": "no_malicious_dependencies",
"params": {}
}
],
"max_points": 100
}
]
},
{
"key": "high_risk_jurisdiction_exposure",
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"name": "High-Risk Jurisdiction Exposure",
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"notes": [
{
"code": "jurisdiction_evidence_limits",
"params": {}
}
],
"value": 100,
"inputs": {
"meaning": "self-published location evidence; not nationality or citizenship",
"red_flag": false,
"exposures": [],
"policy_countries": [
"Russia",
"Iran",
"North Korea"
],
"review_only_matches": 0,
"assessed_self_published_locations": 12
},
"components": [
{
"key": "policy_exposure_multiplier",
"name": "Policy exposure multiplier",
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"points": 100,
"status": "met",
"details": [
{
"code": "jurisdiction_no_match",
"params": {}
}
],
"max_points": 100
}
]
}
],
"description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
},
{
"key": "ai_readiness",
"band": "at_risk",
"name": "AI Readiness",
"value": 39,
"weight": 0,
"metrics": [
{
"key": "ai_agent_context",
"band": "critical",
"name": "Agent context & guidance",
"note": "Excluded from scoring (no data or not applicable): Legible commit history. Remaining weights renormalized.",
"notes": [
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"code": "excluded_no_data",
"params": {
"components": [
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},
{
"code": "weights_renormalized",
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}
],
"value": 1,
"inputs": {
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"legible_history_share": null,
"agent_instruction_files": [],
"agent_instruction_max_bytes": null
},
"components": [
{
"key": "agent_instructions",
"name": "Agent instructions",
"detail": "no CLAUDE.md / AGENTS.md / editor rules",
"points": 0,
"status": "missed",
"details": [
{
"code": "no_agent_instructions",
"params": {}
}
],
"max_points": 45
},
{
"key": "machine_readable_docs_llms_txt",
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"points": 0,
"status": "missed",
"details": [],
"max_points": 15
},
{
"key": "legible_commit_history",
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"points": 0,
"status": "excluded",
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"code": "no_data",
"params": {}
}
],
"max_points": 40
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]
},
{
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"name": "Verify loop (build / test / typecheck)",
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"code": "excluded_no_data",
"params": {
"components": [
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},
{
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],
"value": 62,
"inputs": {
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"toolchain_manifests": [],
"dependency_bot_commit_share": null
},
"components": [
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"key": "one_command_bootstrap",
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"details": [
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"code": "file_list",
"params": {
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{
"key": "automated_tests",
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"points": 22,
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"details": [],
"max_points": 22
},
{
"key": "lint_format_config",
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"points": 11,
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"details": [],
"max_points": 11
},
{
"key": "static_type_checking",
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"points": 0,
"status": "missed",
"details": [],
"max_points": 11
},
{
"key": "reproducible_environment",
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"points": 0,
"status": "missed",
"details": [],
"max_points": 10
},
{
"key": "demonstrated_agent_practice",
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"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
"params": {}
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],
"max_points": 10
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{
"key": "automated_maintenance",
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"points": 0,
"status": "excluded",
"details": [
{
"code": "no_data",
"params": {}
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],
"max_points": 8
},
{
"key": "openssf_scorecard_pinned_dependencies",
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"detail": "dependency not pinned by hash detected -- score normalized to 0",
"points": 0,
"status": "missed",
"details": [],
"max_points": 10
}
]
},
{
"key": "ai_code_legibility",
"band": "moderate",
"name": "Code legibility for models",
"note": null,
"notes": [],
"value": 54,
"inputs": {
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"largest_source_bytes": 67753,
"source_files_sampled": 127,
"oversized_source_files": 3
},
"components": [
{
"key": "type_checkable_code",
"name": "Type-checkable code",
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"points": 0,
"status": "missed",
"details": [
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"code": "no_typecheck_config_language",
"params": {
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],
"max_points": 45
},
{
"key": "manageable_file_sizes",
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"points": 53.7,
"status": "partial",
"details": [
{
"code": "oversized_source_files",
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"sampled": 127,
"oversized": 3
}
}
],
"max_points": 55
}
]
},
{
"key": "ai_interfaces",
"band": "at_risk",
"name": "Machine-readable interfaces",
"note": null,
"notes": [],
"value": 40,
"inputs": {
"example_dirs": [
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"notebooks"
],
"has_mcp_signal": false,
"api_schema_files": []
},
"components": [
{
"key": "api_schema_openapi_graphql_proto",
"name": "API schema (OpenAPI/GraphQL/proto)",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 40
},
{
"key": "mcp_server",
"name": "MCP server",
"detail": null,
"points": 0,
"status": "missed",
"details": [],
"max_points": 20
},
{
"key": "runnable_examples",
"name": "Runnable examples",
"detail": "examples, notebooks",
"points": 40,
"status": "met",
"details": [
{
"code": "file_list",
"params": {
"files": "examples, notebooks"
}
}
],
"max_points": 40
}
]
}
],
"description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
}
],
"metrics_version": "1.13.0"
},
"warnings": [],
"report_type": "repository",
"generated_at": "2026-07-21T04:20:06.840764Z",
"schema_version": "0.17.0",
"badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/c/cokelaer/bioservices.svg",
"full_name": "cokelaer/bioservices",
"license_state": "custom",
"license_spdx": null
}Las puntuaciones son señales, no garantías. Reflejan prácticas públicamente visibles en GitHub; no son una auditoría de código ni una garantía de seguridad.
Los datos ausentes se excluyen y los pesos se renormalizan; nunca se puntúan como cero. La metodología es versionada y abierta: métricas v1.13.0, esquema v0.17.0 — metodología completa · wiki de métricas.
Cómo se sitúa un resultado dentro del registro general: estadísticas agregadas — PyPI.