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#pdb

Todos los repositorios del registro público que llevan esta etiqueta, procedente de sus topics de GitHub o de las palabras clave que publican sus registros de paquetes. La salud se mide con la misma metodología versionada que el resto del registro.

40 registros
Con la etiqueta «pdb»Ordenado por índice de salud
NuGet
78Buenoíndice de salud
icsharpcode/ILSpy
.NET Decompiler with support for PDB generation, ReadyToRun, Metadata (&more) - cross-platform!
C#★ 25.7K17 jul 2026
MIT17 jul 2026 · métricas 1.13.0
PyPI
72Buenoíndice de salud
bradyajohnston/molecularnodes
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
Python★ 131715 jul 2026
GPL-3.015 jul 2026 · métricas 1.13.0
PyPI · npm
70Buenoíndice de salud
project-gemmi/gemmi
macromolecular crystallography library and utilities
C++★ 364↓ 536.2K/mes17 jul 2026
MPL-2.017 jul 2026 · métricas 1.13.0
PyPI
69Moderadoíndice de salud
haddocking/protein-quest
Python package to search/retrieve/filter proteins and protein structures
Python★ 515 jul 2026
Apache-2.015 jul 2026 · métricas 1.13.0
PyPI
67Moderadoíndice de salud
elkins/synth-pdb
Generate realistic PDB files with mixed secondary structures for testing, education and bioinformatics tool development. Jupyter Notebook tutorials are available to visualize the concepts..
Python★ 1↓ 3758/mes15 jul 2026
MIT15 jul 2026 · métricas 1.13.0
PyPI
64Moderadoíndice de salud
cokelaer/bioservices
Access to Biological Web Services from Python.
Python★ 340↓ 36.1K/mes21 jul 2026
Licencia propia21 jul 2026 · métricas 1.13.0
PyPI
63Moderadoíndice de salud
t-0hmura/mlmm_toolkit
Machine‑Learning / Molecular‑Mechanics (ML/MM) hybrid calculator and CLI toolset for Mechanistic Investigation of Enzymatic Reactions.
Python★ 17↓ 387/mes17 jul 2026
GPL-3.017 jul 2026 · métricas 1.13.0
npm
62Moderadoíndice de salud
bugsplat-git/symbol-upload
💻🔀☁️ Cross-platform symbol upload utility and symbol server layout creator for BugSplat
TypeScript · JavaScript★ 13↓ 2955/mes15 jul 2026
MIT15 jul 2026 · métricas 1.13.0
PyPI
62Moderadoíndice de salud
t-0hmura/pdb2reaction
End-to-end Reaction-Path Modeling from PDB Structures Using Machine-Learning Interatomic Potentials
Python★ 15↓ 2374/mes14 jul 2026
GPL-3.014 jul 2026 · métricas 1.13.0
PyPI
61Moderadoíndice de salud
PDBeurope/ccdutils
A set of python tools to deal with PDB chemical components definitions for small molecules, taken from the wwPDB Chemical Component Dictionary, uses RDKit
Python★ 8215 jul 2026
Apache-2.015 jul 2026 · métricas 1.13.0
—
57Moderadoíndice de salud
BIoJulia/BIoStructures.jl
A Julia package to read, write and manipulate macromolecular structures
Julia★ 10517 jul 2026
Licencia propia17 jul 2026 · métricas 1.13.0
PyPI · crates.io
57Moderadoíndice de salud
hfooladi/pdbrust
A Rust library for parsing PDB (Protein Data Bank) files
Rust★ 20↓ 997/mes15 jul 2026
MIT15 jul 2026 · métricas 1.13.0
PyPI
56Moderadoíndice de salud
PDBeurope/rellig
Identifies relevant ligands in the PDB
Python★ 915 jul 2026
Apache-2.015 jul 2026 · métricas 1.13.0
PyPI
55Moderadoíndice de salud
BioPandas/biopandas
Working with molecular structures in pandas DataFrames
Python★ 75621 jul 2026
BSD-3-Clause21 jul 2026 · métricas 1.13.0
npm
53Moderadoíndice de salud
PDBeurope/mmcif-validator
Real-time VSCode extension and standalone Python script for validating mmCIF/CIF files against the PDBx/mmCIF dictionary or any CIF dictionary.
Python · TypeScript★ 1015 jul 2026
Sin licencia15 jul 2026 · métricas 1.13.0
npm
52Moderadoíndice de salud
Piebald-AI/node-lief
Node.js bindings for LIEF, a library to parse and manipulate ELF, PE, and Mach-O executables.
JavaScript · C++★ 8↓ 10.2K/mes17 jul 2026
Apache-2.017 jul 2026 · métricas 1.13.0
PyPI · npm
50Moderadoíndice de salud
N283T/pdb-mine-builder
Build a Mine-schema database from PDB data. Load PDBj structural biology data into PostgreSQL with RDKit chemical search support.
Python★ 0↓ 1096/mes15 jul 2026
MIT15 jul 2026 · métricas 1.13.0
PyPI
50Moderadoíndice de salud
pdbeurope/investigations
This application is designed to create mmcif files from facilities data.
Python★ 6↓ 1071/mes15 jul 2026
Sin licencia15 jul 2026 · métricas 1.13.0
PyPI
49En riesgoíndice de salud
PDBEurope/mmcif-gen
This application is designed to create mmcif files from facilities data.
Python★ 617 jul 2026
Sin licencia17 jul 2026 · métricas 1.13.0
PyPI
48En riesgoíndice de salud
AkhilTeja2209/Proteinspy
Python library and a CLI tool to analyze protein sample files
Python★ 0↓ 975/mes15 jul 2026
MIT15 jul 2026 · métricas 1.13.0
npm
48En riesgoíndice de salud
juliocesar-io/nano-protein-viewer-react
React component for visualizing protein structures with the Mol* framework.
TypeScript★ 8↓ 710/mes15 jul 2026
MIT15 jul 2026 · métricas 1.13.0
PyPI
48En riesgoíndice de salud
n283t/view-cif
CLI tool to view CIF files from various sources in your editor
Python★ 015 jul 2026
MIT15 jul 2026 · métricas 1.13.0
PyPI
47En riesgoíndice de salud
gotcha/ipdb
Integration of IPython pdb
Python★ 197518 jul 2026
BSD-3-Clause18 jul 2026 · métricas 1.13.0
PyPI
46En riesgoíndice de salud
crabisoft/pdbstore
Publish PDB and PE files to symbols store
Python★ 215 jul 2026
MIT15 jul 2026 · métricas 1.13.0
PyPI
45En riesgoíndice de salud
gqy20/protein-mcp
FastMCP-based protein data access tools for bioinformatics research
Python★ 0↓ 682/mes15 jul 2026
MIT15 jul 2026 · métricas 1.13.0
PyPI
44En riesgoíndice de salud
diggerdu/apdb
apdb: python debugger for agents
Python★ 0↓ 1522/mes15 jul 2026
BSD-2-Clause15 jul 2026 · métricas 1.13.0
PyPI
43En riesgoíndice de salud
PDBeurope/pdbecif
A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"
Python★ 38↓ 8169/mes17 jul 2026
Apache-2.017 jul 2026 · métricas 1.13.0
PyPI
43En riesgoíndice de salud
a-r-j/cpdb
Cython implementation of PDB -> DataFrame parsing
Cython · Jupyter Notebook · Python★ 34↓ 20.1K/mes15 jul 2026
MIT15 jul 2026 · métricas 1.13.0
—
43En riesgoíndice de salud
uclorengogroup/cath-tools
Protein structure comparison tools such as SSAP and SNAP
C++ · Promela★ 6715 jul 2026
GPL-3.015 jul 2026 · métricas 1.13.0