Публічний реєстр
Звіт про здоров'я програмного забезпеченнясхема 0.26.0 · метрики 1.13.0 · 2026-07-22 15:26 UTC

evolbioinfo / gotree

Gotree: a set of command line tools and an API to manipulate phylogenetic trees.

Go · ShellGPL-2.0★ 150 зірок⑂ 19 форківз лип. 2016 р.Переглянути на GitHub ↗

evolbioinfo/gotree має індекс здоров’я 61 зі 100, що відповідає смузі «Помірний». Найвищий показник — Engineering Quality (81/100), найнижчий — Security (37/100). Останнє оновлення було 7 днів тому. Більшість нещодавньої роботи виконує один учасник.

61
загалом / 100
Помірний

Індекс здоров'я програмного забезпечення

Метрики згруповано у зважені категорії на шкалі 1–100. Загальна оцінка починається як їхнє середнє; коли публічні дані активують Політику юрисдикцій високого ризику, рейтинг коригується й отримує верхню межу 49 («Під ризиком»). Готовність до ШІ не входить до індексу.

61
Відмінний85-100Зразковий; відповідає практично всім перевіреним критеріям
Добрий70-84Здоровий; незначні прогалини
Помірний50-69Прийнятний, але з помітними прогалинами; рекомендовано перевірку
У зоні ризику30-49Суттєві слабкі місця; впровадження потребує обережності
Критичний1-29Серйозні проблеми (покинутий, єдиний мейнтейнер, без базової гігієни)
ЖиттєздатністьСпільнота тавпровадженняСталість таврядуванняІнженернаякістьБезпекаГотовність доШІ

Профіль оцінок

Кожна вісь — окрема категорія. Форма важить більше, ніж середнє: здоровий об'єкт заповнює всю фігуру, тоді як профіль із піками та провалами означає, що сила в одному вимірі маскує ризик в іншому.

Власність

Evolutionary BioinformaticsОрганізація
50 підписників30 публічних репозиторіївз лют. 2017 р.

За цим репозиторієм стоїть організація — спільна, підзвітна опіка, здатна пережити будь-якого окремого мейнтейнера.

Пакетні екосистеми

РеєстрПакетВерсіяЗавантажень / місВерсіїОстання публікація
Gogithub.com/evolbioinfo/gotreev0.5.2-4022 дні тому

Метрики за категоріями

Життєздатність

Чи живий проєкт — чи пишеться код і чи виходять релізи?

68Помірний · 22% загального індексу
Як обчислюється оцінка
36/36Свіжість push — останній push 7 дн. тому
6.9/36Ритм комітів — 10/52 тижнів із комітами
14.1/18Обсяг комітів — 36 комітів за останній рік
5/10OpenSSF Scorecard: Maintained — 6 commit(s) and 1 issue activity found in the last 90 days -- score normalized to 5
Використані вхідні дані
commits_last_year36
human_commit_share0,95
days_since_last_push7
active_weeks_last_year10
Як обчислюється оцінка
27/27Випускає релізи — опубліковано 53 релізів
36/36Свіжість релізів — останній реліз 6 дн. тому
12.6/27Ритм релізів — реліз кожні ~217 дн.
0/10OpenSSF Scorecard: Signed-Releases — Project has not signed or included provenance with any releases.
Використані вхідні дані
releases_count53
latest_release_tagv0.5.2
releases_from_tagsні
days_since_latest_release6
mean_days_between_releases217

Спільнота та впровадження

Чи має проєкт користувачів, завантаження, увагу та влаштовані умови для контриб’юторів?

51Помірний · 18% загального індексу
Як обчислюється оцінка
35.3/60Зірки — 150 зірок
10.5/25Форки — 19 форків
5.6/15Спостерігачі — 11 спостерігачів
Використані вхідні дані
forks19
stars150
watchers11
growth_stateunverified
growth_factor_pct100
growth_unverified_reasonno_history
Як обчислюється оцінка
22.5/22.5README
22.5/22.5Ліцензія — визнана ліцензія (GPL-2.0)
0/18Настанови CONTRIBUTING
0/13.5Кодекс поведінки
0/7.2Шаблон issue
0/6.3Шаблон PR
Використані вхідні дані
has_readmeтак
has_licenseтак
has_contributingні
has_issue_templateні
has_code_of_conductні
has_pull_request_templateні

Сталість та врядування

Чи переживе проєкт своїх людей — бас-фактор, реактивність, хто за ним стоїть і як супроводжуються пакети?

63Помірний · 24% загального індексу
Як обчислюється оцінка
9/54Бас-фактор — на 1 контриб’ютор(ів) припадає половина всіх комітів
0.3/22.5Розподіл комітів — головний контриб’ютор — автор 99% комітів
6.8/13.5Широта контриб’юторів — 5 контриб’юторів
6/10OpenSSF Scorecard: Contributors — project has 2 contributing companies or organizations -- score normalized to 6
Використані вхідні дані
bus_factor1
contributors_sampled5
top_contributor_share0,986
Як обчислюється оцінка
42.3/46.8Вирішення issue — закрито 90% issue
38.2/38.3Прийняття PR — злито 9/9 вирішених PR
0/15OpenSSF Scorecard: Code-Review — Found 1/19 approved changesets -- score normalized to 0
Використані вхідні дані
merged_prs9
open_issues2
closed_issues19
issue_closed_ratio0,905
closed_unmerged_prs0
Як обчислюється оцінка
30/30Підтримка власника — у власності організації
0/20Верифікований домен
12.3/25Охоплення власника — 50 підписників у evolbioinfo
22.9/25Послужний список — 30 публічних репозиторіїв, вік облікового запису ~9 р.
Використані вхідні дані
followers50
owner_typeOrganization
is_verified
owner_loginevolbioinfo
public_repos30
account_age_days3 437

Супровід пакетів

100Відмінний
Як обчислюється оцінка
25/25Опубліковано й доступно — 1 пакет(ів) у go
35/35Свіжість публікацій — остання публікація 22 дн. тому
20/20Історія версій — 40 опублікованих версій
20/20Не застарілий — активний, не deprecated і не yanked
Використані вхідні дані
packagesgithub.com/evolbioinfo/gotree
ecosystemsgo
any_deprecatedні
min_days_since_publish22

Інженерна якість

Чи наявні базові інженерні практики та документація?

81Добрий · 20% загального індексу
Як обчислюється оцінка
24/24Процеси CI — 1 процес(ів) CI
24/24Наявні тести
0/16Конфігурація лінтера
0/9.6Pre-commit-хуки
0/6.4.editorconfig
20/20OpenSSF Scorecard: CI-Tests — 3 out of 3 merged PRs checked by a CI test -- score normalized to 10
Використані вхідні дані
has_ciтак
has_testsтак
has_editorconfigні
has_linter_configні
has_precommit_configні

Документація

100Відмінний
Як обчислюється оцінка
30/30README
25/25Каталог документації
15/15Сайт документації / домашня сторінка — https://research.pasteur.fr/en/software/goalign-gotree/
10/10Опис репозиторію
10/10Теми — 7 тем
10/10Wiki
Використані вхідні дані
topicsphylogeny, newick, tree, tree-structure, itol, gotree, nexus
has_wikiтак
homepagehttps://research.pasteur.fr/en/software/goalign-gotree/
has_readmeтак
has_docs_dirтак
has_descriptionтак

Безпека

Чи міцні видимі практики безпеки й ланцюга постачання, без непослабленої пов’язаності з юрисдикціями високого ризику?

37У зоні ризику · 16% загального індексу

Стан безпеки

30У зоні ризику
Як обчислюється оцінка
7.5/7.5Binary-Artifacts — no binaries found in the repo
0/7.5Branch-Protection — немає даних
2.5/2.5CI-Tests — 3 out of 3 merged PRs checked by a CI test -- score normalized to 10
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
0/7.5Code-Review — Found 1/19 approved changesets -- score normalized to 0
1.5/2.5Contributors — project has 2 contributing companies or organizations -- score normalized to 6
10/10Dangerous-Workflow — no dangerous workflow patterns detected
0/7.5Dependency-Update-Tool — no update tool detected
0/5Fuzzing — project is not fuzzed
2.5/2.5Ліцензія — license file detected
3.8/7.5Maintained — 6 commit(s) and 1 issue activity found in the last 90 days -- score normalized to 5
0/5Packaging — немає даних
0/5Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
0/5SAST — SAST tool is not run on all commits -- score normalized to 0
0/5Security-Policy — security policy file not detected
0/7.5Signed-Releases — Project has not signed or included provenance with any releases.
0/7.5Token-Permissions — detected GitHub workflow tokens with excessive permissions
0/7.5Vulnerabilities — 12 existing vulnerabilities detected
Використані вхідні дані
sourceopenssf_scorecard
checks_evaluated16
scorecard_versionv5.5.0
checks_inconclusive2
scorecard_aggregate3
Виключено з оцінювання (немає даних або не застосовно): branch_protection, packaging. Залишкові ваги перенормовано.
Як обчислюється оцінка
14/35Прямі залежності без відомих сповіщень — уражено 1: golang.org/x/image v0.11.0 (high 7.5)
0/25Непрямі залежності без відомих сповіщень — транзитивний набір не відокремлюється від залежностей розробки й тестування в цьому обсязі
33.7/40Немає задавнених сповіщень — 1 пакет(ів) зі сповіщеннями без реакції понад 90 дн.; найдавніше опубліковано 756 дн. тому
Використані вхідні дані
sourceosv
advisories16
affected_packages4
assessed_packages39
unassessed_packages0
affected_by_severityhigh 1, moderate 1, unknown 2
direct_affected_packages1
Виключено з оцінювання (немає даних або не застосовно): Непрямі залежності без відомих сповіщень. Залишкові ваги перенормовано. Звірено 39 резолвлених залежностей із OSV. Цей репозиторій не публікує пакета, який резолвить індекс, тож натомість оцінено граф залежностей репозиторію. Цей граф змішує закріплені версії для розробки й тестування зі справді постачаними залежностями, тож оцінюються лише задекларовані runtime-залежності; транзитивні знахідки подаються як контекст і в оцінку не входять. Досяжність не аналізується.

Готовність до ШІ

Наскільки репозиторій оснащений для розробки та супроводу за участі ШІ-агентів? Незалежний, експериментальний бейдж — вага 0.0, тож він подається окремо і не впливає на загальний індекс здоров'я.

48У зоні ризику · 0% загального індексу
Як обчислюється оцінка
0/45Інструкції для агентів — немає CLAUDE.md / AGENTS.md / правил редактора
0/15Машиночитана документація (llms.txt)
5.6/40Читабельна історія комітів — намір зазначено у 10 з 95 людських комітів (структурований заголовок або пояснювальний текст)
Використані вхідні дані
has_llms_txtні
legible_history_share0,105
agent_instruction_files
agent_instruction_max_bytes
Як обчислюється оцінка
18/18Розгортання однією командою — Makefile
22/22Автоматизовані тести
0/11Конфігурація лінтера / форматера
11/11Статична перевірка типів — Go (статично типізована)
10/10Відтворюване середовище — lockfile
0/10Підтверджена практика роботи з агентами — серед останніх 100 комітів немає створених агентом
0/8Автоматизоване супроводження — автоматичних оновлень залежностей не виявлено
0/10OpenSSF Scorecard: Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
Використані вхідні дані
has_nixні
has_testsтак
lockfilesgo.sum
has_dockerfileні
typed_languageтак
bootstrap_filesMakefile
has_devcontainerні
has_linter_configні
typecheck_configs
agent_commit_share0
toolchain_manifestsgo.mod
dependency_bot_commit_share0
Як обчислюється оцінка
45/45Типізований код — Go (статично типізована)
54.7/55Керовані розміри файлів — 1/180 файлів вихідного коду понад 60 КБ
Використані вхідні дані
primary_languageGo
largest_source_bytes61 630
source_files_sampled180
oversized_source_files1

Ключові факти

150зірок GitHub
5контриб'юторів
36комітів за останні 12 місяців
7днів від останнього пушу
53релізів
1бас-фактор
2відкритих issue
Goпакетних екосистем

Попередження щодо збору даних

  • Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token

Докладніше

Історія зірок і форків 0 ★ / 19 ⇿
0Зірки
19Форки
17Релізи

Коли додано кожну зірку й форк — зібрано з GitHub і згруповано за днями. Кумулятивне зростання розміщено просто над денними додаваннями, з яких воно складається, тож їх видно одне проти одного: рівномірне органічне накопичення виглядає зовсім інакше, ніж різкий короткочасний сплеск. Там, де цю різницю можна виміряти, її подано як автентичність росту.

0481216201922018-122022-092026-06
Мажорні 0Мінорні 3Патчі 7

Кожна точка охоплює 7 днів.

OpenSSF Scorecard 3.0 / 10
3.0сукупно

Незалежна, не прив'язана до інструментів оцінка безпеки від відкритого проєкту OpenSSF Scorecard. Кожна перевірка винагороджує практику безпеки, а не інструмент конкретного постачальника. Перевірки, які Scorecard не зміг визначити, позначено н/д і виключено з оцінки безпеки (вони ніколи не зараховуються як нуль).Scorecard v5.5.0 · 2026-07-22 15:26 UTC

10Binary-Artifactsno binaries found in the repo
н/дBranch-Protectioninternal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md
10CI-Tests3 out of 3 merged PRs checked by a CI test -- score normalized to 10
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
0Code-ReviewFound 1/19 approved changesets -- score normalized to 0
6Contributorsproject has 2 contributing companies or organizations -- score normalized to 6
10Dangerous-Workflowno dangerous workflow patterns detected
0Dependency-Update-Toolno update tool detected
0Fuzzingproject is not fuzzed
10Licenselicense file detected
5Maintained6 commit(s) and 1 issue activity found in the last 90 days -- score normalized to 5
н/дPackagingpackaging workflow not detected
0Pinned-Dependenciesdependency not pinned by hash detected -- score normalized to 0
0SASTSAST tool is not run on all commits -- score normalized to 0
0Security-Policysecurity policy file not detected
0Signed-ReleasesProject has not signed or included provenance with any releases.
0Token-Permissionsdetected GitHub workflow tokens with excessive permissions
0Vulnerabilities12 existing vulnerabilities detected
Прямі залежності 11
РеєстрПакетОбмеження версіїМаніфест
Gogithub.com/ajstarks/svgov0.0.0-20211024235047-1546f124cd8bgo.mod
Gogithub.com/evolbioinfo/goalignv0.3.7-0.20230906113011-fcecb09f9d43go.mod
Gogithub.com/fredericlemoine/bitsetv1.2.0go.mod
Gogithub.com/fredericlemoine/cobrashellv0.0.0-20180921081141-49c72f93426cgo.mod
Gogithub.com/fredericlemoine/gostatsv0.2.0go.mod
Gogithub.com/golang/freetypev0.0.0-20170609003504-e2365dfdc4a0go.mod
Gogithub.com/jlaffaye/ftpv0.0.0-20210307004419-5d4190119067go.mod
Gogithub.com/llgcode/draw2dv0.0.0-20210313082411-577c1ead272ago.mod
Gogithub.com/spf13/cobrav1.5.0go.mod
Gogolang.org/x/imagev0.11.0go.mod
Gogonum.org/v1/plotv0.14.0go.mod
Усі залежності 39

Повний розв'язаний набір залежностей із графа залежностей GitHub: 11 прямих і 28 непрямих (транзитивних) пакетів. Транзитивне замикання є повним, коли в репозиторії закомічено lockfile.

РеєстрПакетВерсіяЗв'язок
Gogithub.com/ajstarks/svgov0.0.0-20211024235047-1546f124cd8bпряма
Gogithub.com/evolbioinfo/goalignv0.3.7-0.20230906113011-fcecb09f9d43пряма
Gogithub.com/fredericlemoine/bitsetv1.2.0пряма
Gogithub.com/fredericlemoine/cobrashellv0.0.0-20180921081141-49c72f93426cпряма
Gogithub.com/fredericlemoine/gostatsv0.2.0пряма
Gogithub.com/golang/freetypev0.0.0-20170609003504-e2365dfdc4a0пряма
Gogithub.com/jlaffaye/ftpv0.0.0-20210307004419-5d4190119067пряма
Gogithub.com/llgcode/draw2dv0.0.0-20210313082411-577c1ead272aпряма
Gogithub.com/spf13/cobrav1.5.0пряма
Gogolang.org/x/imagev0.11.0пряма
Gogonum.org/v1/plotv0.14.0пряма
Gogioui.orgv0.2.0непряма
Gogioui.org/cpuv0.0.0-20220412190645-f1e9e8c3b1f7непряма
Gogioui.org/shaderv1.0.6непряма
Gogioui.org/xv0.2.0непряма
Gogit.sr.ht/~sbinet/ggv0.5.0непряма
Gogithub.com/abiosoft/ishellv2.0.0+incompatibleнепряма
Gogithub.com/abiosoft/readlinev0.0.0-20180607040430-155bce2042dbнепряма
Gogithub.com/andybalholm/strokev0.0.0-20221221101821-bd29b49d73f0непряма
Gogithub.com/armon/go-radixv1.0.0непряма
Gogithub.com/campoy/embedmdv1.0.0непряма
Gogithub.com/fatih/colorv1.10.0непряма
Gogithub.com/flynn-archive/go-shlexv0.0.0-20150515145356-3f9db97f8568непряма
Gogithub.com/go-fonts/liberationv0.3.1непряма
Gogithub.com/go-latex/latexv0.0.0-20230307184459-12ec69307ad9непряма
Gogithub.com/go-pdf/fpdfv0.8.0непряма
Gogithub.com/go-text/typesettingv0.0.0-20230803102845-24e03d8b5372непряма
Gogithub.com/inconshreveable/mousetrapv1.0.1непряма
Gogithub.com/mattn/go-colorablev0.1.8непряма
Gogithub.com/mattn/go-isattyv0.0.12непряма
Gogithub.com/pmezard/go-difflibv1.0.0непряма
Gogithub.com/spf13/pflagv1.0.5непряма
Gogithub.com/ulikunitz/xzv0.5.10непряма
Gogolang.org/x/expv0.0.0-20230801115018-d63ba01acd4bнепряма
Gogolang.org/x/exp/shinyv0.0.0-20230801115018-d63ba01acd4bнепряма
Gogolang.org/x/sysv0.11.0непряма
Gogolang.org/x/textv0.12.0непряма
Gogonum.org/v1/gonumv0.14.0непряма
Gorsc.io/pdfv0.1.1непряма
Сповіщення про залежності 4

Цей репозиторій не публікує пакета, який розпізнає індекс, тож оцінено його власний граф залежностей — 39 пакетів, серед яких є й піниї розробки та тестування, що ніколи не постачаються: 4 мають відомі сповіщення, з них 1 прямі.

ПакетВерсіяЗв'язокКритичністьСповіщеньВиправлено в
golang.org/x/imagev0.11.0прямависока120.43.0
github.com/ulikunitz/xzv0.5.10непрямапомірна20.5.15
golang.org/x/sysv0.11.0непряманевідома10.44.0
golang.org/x/textv0.12.0непряманевідома10.39.0

Сповіщення означає, що версія, записана в графі залежностей, потрапляє в уражений діапазон. Досяжність не аналізується, а граф містить піниї розробки й тестування — знахідка може стосуватися інструментів, а не поставленого коду.

Звіт у форматі JSON машиночитний
{
  "data": {
    "repo": {
      "topics": [
        "phylogeny",
        "newick",
        "tree",
        "tree-structure",
        "itol",
        "gotree",
        "nexus"
      ],
      "is_fork": false,
      "size_kb": 2145,
      "has_wiki": true,
      "homepage": "https://research.pasteur.fr/en/software/goalign-gotree/",
      "languages": {
        "Go": 659007,
        "Shell": 80334,
        "Makefile": 1853
      },
      "pushed_at": "2026-07-15T15:22:55Z",
      "created_at": "2016-07-27T15:39:01Z",
      "owner_type": "Organization",
      "updated_at": "2026-07-15T15:41:21Z",
      "description": "Gotree: a set of command line tools and an API to manipulate phylogenetic trees.",
      "is_archived": false,
      "is_disabled": false,
      "license_spdx": "GPL-2.0",
      "default_branch": "master",
      "license_spdx_raw": "GPL-2.0",
      "primary_language": "Go",
      "significant_languages": [
        "Go",
        "Shell"
      ]
    },
    "owner": {
      "blog": null,
      "name": "Evolutionary Bioinformatics",
      "type": "Organization",
      "login": "evolbioinfo",
      "company": null,
      "location": "Paris, France",
      "followers": 50,
      "avatar_url": "https://avatars.githubusercontent.com/u/25950370?v=4",
      "created_at": "2017-02-22T08:56:58Z",
      "is_verified": null,
      "public_repos": 30,
      "account_age_days": 3437
    },
    "license": {
      "state": "standard",
      "spdx_id": "GPL-2.0",
      "raw_spdx": "GPL-2.0",
      "file_present": true,
      "scorecard_found": true,
      "profile_has_license": true
    },
    "activity": {
      "releases": [
        {
          "tag": "v0.5.2",
          "kind": "patch",
          "published_at": "2026-07-15T15:30:34Z"
        },
        {
          "tag": "v0.5.1",
          "kind": "patch",
          "published_at": "2025-12-15T14:44:16Z"
        },
        {
          "tag": "v0.5.0",
          "kind": "minor",
          "published_at": "2025-07-09T15:38:33Z"
        },
        {
          "tag": "v0.4.5",
          "kind": "patch",
          "published_at": "2023-11-28T16:29:51Z"
        },
        {
          "tag": "v0.4.4",
          "kind": "patch",
          "published_at": "2022-12-09T11:24:19Z"
        },
        {
          "tag": "v0.4.4a",
          "kind": "other",
          "published_at": "2022-06-29T09:33:36Z"
        },
        {
          "tag": "v0.4.3",
          "kind": "patch",
          "published_at": "2022-04-14T08:03:45Z"
        },
        {
          "tag": "v0.4.3a",
          "kind": "other",
          "published_at": "2021-11-26T15:27:29Z"
        },
        {
          "tag": "v0.4.2",
          "kind": "patch",
          "published_at": "2021-09-07T09:11:03Z"
        },
        {
          "tag": "v0.4.1",
          "kind": "patch",
          "published_at": "2021-03-10T15:59:18Z"
        },
        {
          "tag": "v0.4.1c",
          "kind": "other",
          "published_at": "2021-01-15T14:15:41Z"
        },
        {
          "tag": "v0.4.1b",
          "kind": "other",
          "published_at": "2021-01-06T22:28:22Z"
        },
        {
          "tag": "v0.4.1a",
          "kind": "other",
          "published_at": "2020-08-24T14:02:02Z"
        },
        {
          "tag": "v0.4.0",
          "kind": "minor",
          "published_at": "2020-03-10T13:23:51Z"
        },
        {
          "tag": "v0.4.0a",
          "kind": "other",
          "published_at": "2020-02-05T21:22:20Z"
        },
        {
          "tag": "v0.3.1",
          "kind": "patch",
          "published_at": "2019-10-02T15:24:10Z"
        },
        {
          "tag": "v0.3.1a",
          "kind": "other",
          "published_at": "2019-06-17T12:37:46Z"
        },
        {
          "tag": "v0.3.0",
          "kind": "minor",
          "published_at": "2019-04-29T09:20:27Z"
        },
        {
          "tag": "v0.3.0a",
          "kind": "other",
          "published_at": "2018-09-21T14:24:41Z"
        },
        {
          "tag": "v0.2.11",
          "kind": "patch",
          "published_at": "2018-08-02T14:16:16Z"
        },
        {
          "tag": "v0.2.11a",
          "kind": "other",
          "published_at": "2018-05-07T14:33:56Z"
        },
        {
          "tag": "v0.2.10",
          "kind": "patch",
          "published_at": "2018-04-10T12:47:52Z"
        },
        {
          "tag": "v0.2.10c",
          "kind": "other",
          "published_at": "2018-03-26T09:56:51Z"
        },
        {
          "tag": "v0.2.10b",
          "kind": "other",
          "published_at": "2018-03-14T10:50:16Z"
        },
        {
          "tag": "v0.2.10a",
          "kind": "other",
          "published_at": "2018-03-12T09:24:06Z"
        },
        {
          "tag": "v0.2.9",
          "kind": "patch",
          "published_at": "2018-03-08T13:01:39Z"
        },
        {
          "tag": "v0.2.8b",
          "kind": "other",
          "published_at": "2018-03-02T13:30:00Z"
        },
        {
          "tag": "v0.2.7",
          "kind": "patch",
          "published_at": "2018-02-02T09:15:01Z"
        },
        {
          "tag": "v0.2.7b",
          "kind": "other",
          "published_at": "2018-01-23T13:53:49Z"
        },
        {
          "tag": "v0.2.6",
          "kind": "patch",
          "published_at": "2018-01-09T13:07:53Z"
        },
        {
          "tag": "v0.2.5",
          "kind": "patch",
          "published_at": "2018-01-08T17:11:36Z"
        },
        {
          "tag": "v0.2.4",
          "kind": "patch",
          "published_at": "2017-11-06T10:30:31Z"
        },
        {
          "tag": "v0.2.3",
          "kind": "patch",
          "published_at": "2017-09-06T07:26:33Z"
        },
        {
          "tag": "v0.2.2",
          "kind": "patch",
          "published_at": "2017-07-03T12:08:40Z"
        },
        {
          "tag": "v0.2.1",
          "kind": "patch",
          "published_at": "2017-06-09T13:11:02Z"
        },
        {
          "tag": "v0.2.0",
          "kind": "minor",
          "published_at": "2017-04-25T12:25:55Z"
        },
        {
          "tag": "v0.1.14-b",
          "kind": "prerelease",
          "published_at": "2017-04-04T09:34:03Z"
        },
        {
          "tag": "v0.1.14-a",
          "kind": "prerelease",
          "published_at": "2017-03-31T12:59:26Z"
        },
        {
          "tag": "v0.1.13",
          "kind": "patch",
          "published_at": "2017-03-10T15:41:05Z"
        },
        {
          "tag": "v0.1.12",
          "kind": "patch",
          "published_at": "2017-03-01T08:51:39Z"
        },
        {
          "tag": "v0.1.11",
          "kind": "patch",
          "published_at": "2017-02-22T11:12:47Z"
        },
        {
          "tag": "v0.1.10",
          "kind": "patch",
          "published_at": "2017-02-17T13:48:35Z"
        },
        {
          "tag": "v0.1.10-alpha",
          "kind": "prerelease",
          "published_at": "2017-02-16T15:56:25Z"
        },
        {
          "tag": "v0.1.9",
          "kind": "patch",
          "published_at": "2017-02-13T12:04:11Z"
        },
        {
          "tag": "v0.1.8",
          "kind": "patch",
          "published_at": "2017-01-30T16:01:54Z"
        },
        {
          "tag": "v0.1.7",
          "kind": "patch",
          "published_at": "2017-01-13T15:47:27Z"
        },
        {
          "tag": "v0.1.6",
          "kind": "patch",
          "published_at": "2016-12-12T09:15:16Z"
        },
        {
          "tag": "v0.1.5",
          "kind": "patch",
          "published_at": "2016-12-08T17:00:40Z"
        },
        {
          "tag": "v0.1.4",
          "kind": "patch",
          "published_at": "2016-11-29T14:47:58Z"
        },
        {
          "tag": "v0.1.3",
          "kind": "patch",
          "published_at": "2016-11-09T12:45:46Z"
        },
        {
          "tag": "v0.1.2",
          "kind": "patch",
          "published_at": "2016-10-31T10:02:23Z"
        },
        {
          "tag": "v0.1.1",
          "kind": "patch",
          "published_at": "2016-10-05T13:14:53Z"
        },
        {
          "tag": "v0.1.0",
          "kind": "minor",
          "published_at": "2016-10-05T12:08:53Z"
        }
      ],
      "recent_commits": [
        {
          "oid": "8ce3ce6eb5b14261b0be7ed2b1b02bcf22dfc305",
          "body": "…pecial character #29",
          "is_bot": false,
          "headline": "Updated newick Parser to support quoted tip names containing newick s…",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-06-30T07:47:09Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d066f5cdf0b8e29358cced433ccc0717387adb7d",
          "body": null,
          "is_bot": false,
          "headline": "Merge branch 'master' into dev",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-06-30T07:24:12Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7e072fdb388fa41565d355507e804a016f1a2f08",
          "body": "fix: correct Unkown->Unknown typo in error messages",
          "is_bot": false,
          "headline": "Merge pull request #31 from Jah-yee/master",
          "author_name": "fredericlemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-06-30T07:23:04Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "847f5273122605c56adf48e134416ac2aed1b439",
          "body": null,
          "is_bot": false,
          "headline": "fix: correct Unkown->Unknown typo in error messages",
          "author_name": "Jah-yee",
          "author_login": "Jah-yee",
          "committed_at": "2026-06-30T05:52:48Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e0a02020f1e53a1ca2492ea093c2ed09ad52cd9b",
          "body": "…n --outtipfile",
          "is_bot": false,
          "headline": "Added information on pruned tips as output of gotree prune with optio…",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-06-11T12:07:40Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "01ea5a156df826751597bbe82a914875103b8665",
          "body": "… change",
          "is_bot": false,
          "headline": "Added option --tip to brlen set: to select a unique extrnal branch to…",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-06-10T10:55:06Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d7c541e5dd0d3adf98fe25bf958fa5047245a9ca",
          "body": null,
          "is_bot": false,
          "headline": "Merge branch 'master' into tipneigbor",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-04-02T14:30:39Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "83cca67fdcf64af47f6f3318d3eebdcb417d45a4",
          "body": null,
          "is_bot": false,
          "headline": "Corrected part of a bug in radial tree drawing #25",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-04-02T14:25:12Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "da6636167067bcfed93bd8814a2f6cf45b1890ea",
          "body": null,
          "is_bot": false,
          "headline": "Merged master",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-03-27T13:27:55Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "752734de4534beca5a96146a90383a5b6649408e",
          "body": null,
          "is_bot": false,
          "headline": "Added option --tip to gotree compare neighborhood",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-03-26T16:00:17Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "ce5c3df83e07a220b4597ea4a97ee4bb226f456a",
          "body": null,
          "is_bot": false,
          "headline": "Moved sort.go to sliceutils package",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-03-26T14:04:30Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9752a3d8f17096a7b0a44f765ed4070272738422",
          "body": null,
          "is_bot": false,
          "headline": "Added test for gotree compare neighborhood",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-03-26T14:03:13Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8ab52855d08ba1567e62534a45be036da9eb32e0",
          "body": null,
          "is_bot": false,
          "headline": "Added -m metric option to gotree compare neighborhood + documentation",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-03-26T08:40:42Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b4ef53cb666bf1bde0371104117f8318309d8d3c",
          "body": null,
          "is_bot": false,
          "headline": "Add some tips functions",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-03-25T10:33:05Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4e3bb123d481138c061fdfe9497c1b2a69d98a0d",
          "body": "…-functionalities\n\nUpdate README.md to reflect current functionalities",
          "is_bot": false,
          "headline": "Merge pull request #28 from evolbioinfo/copilot/update-readme-reflect…",
          "author_name": "fredericlemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-03-13T16:38:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6382c3b3990d59978ea4b9d48d7d2ce6f557697d",
          "body": null,
          "is_bot": false,
          "headline": "Update README.md",
          "author_name": "fredericlemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-03-13T16:35:50Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "747998d197cdcd39b5d407838fac250029bf7668",
          "body": null,
          "is_bot": false,
          "headline": "Update README.md",
          "author_name": "fredericlemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-03-13T16:35:43Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "50c8109c0117a8656303bcb4a7508ef9773ba0c4",
          "body": null,
          "is_bot": false,
          "headline": "Update README.md",
          "author_name": "fredericlemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-03-13T16:35:35Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "49dc32de471437be4d60e89701745823bfc6ab6b",
          "body": "Co-authored-by: fredericlemoine <16349382+fredericlemoine@users.noreply.github.com>",
          "is_bot": true,
          "headline": "Update README.md to reflect current functionalities",
          "author_name": "copilot-swe-agent[bot]",
          "author_login": "Copilot",
          "committed_at": "2026-03-13T16:18:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "83349089033077482e4a04fdbec89679f19235e2",
          "body": null,
          "is_bot": true,
          "headline": "Initial plan",
          "author_name": "copilot-swe-agent[bot]",
          "author_login": "Copilot",
          "committed_at": "2026-03-13T16:12:55Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "13dffc07e076d1c71cac53bdb5c8f8ad59bfb4b2",
          "body": "…rsity-option\n\ndocs: add `--diversity` flag to `gotree prune` docs and generate example SVGs",
          "is_bot": false,
          "headline": "Merge pull request #27 from evolbioinfo/copilot/add-gotree-prune-dive…",
          "author_name": "fredericlemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-03-13T16:08:14Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f2ee59d52e976a9e49d84f272d29f68e79a41db0",
          "body": "Co-authored-by: fredericlemoine <16349382+fredericlemoine@users.noreply.github.com>",
          "is_bot": true,
          "headline": "docs: generate prune_8.svg and prune_9.svg for diversity example",
          "author_name": "copilot-swe-agent[bot]",
          "author_login": "Copilot",
          "committed_at": "2026-03-13T12:44:34Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "c16fc05255ee267ced154bb482d62a272bed3c35",
          "body": "Co-authored-by: fredericlemoine <16349382+fredericlemoine@users.noreply.github.com>",
          "is_bot": true,
          "headline": "docs: add --diversity option to gotree prune documentation",
          "author_name": "copilot-swe-agent[bot]",
          "author_login": "Copilot",
          "committed_at": "2026-03-13T12:36:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "cda92134c89bd5ac99aaca97de66839d1cffd00d",
          "body": null,
          "is_bot": true,
          "headline": "Initial plan",
          "author_name": "copilot-swe-agent[bot]",
          "author_login": "Copilot",
          "committed_at": "2026-03-13T12:33:05Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1f633c37a2d5db24161837e511669a74a03fb0b8",
          "body": "…roach",
          "is_bot": false,
          "headline": "Upudated random number generator with seed: using the recommended app…",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2026-01-09T17:42:26Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e576594639bbc5b8b161e090b84ae3a1b0170804",
          "body": null,
          "is_bot": false,
          "headline": "Temporary setting to revert to old random seed handling",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-12-11T20:32:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "47f9aaefbb75438ba53186af838505706e13e9ed",
          "body": null,
          "is_bot": false,
          "headline": "Updated to go 1.24.11",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-12-11T15:00:27Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "0209ac631ce1999733abc0288ed7a130c0253b85",
          "body": null,
          "is_bot": false,
          "headline": "Updated README",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-12-11T10:02:25Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9dd0d07b2f3bae130850715de7f55d04b960e3e4",
          "body": null,
          "is_bot": false,
          "headline": "Updated README",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-12-11T10:01:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "3e6b5c9f7fd289e2f93d10a08f2d970f835ab3a3",
          "body": null,
          "is_bot": false,
          "headline": "Corrected conda badge",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-12-11T10:00:04Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a7fc2be39a5710c2c51a3e06edff88332971d3ff",
          "body": null,
          "is_bot": false,
          "headline": "Updated conda badge",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-12-11T09:58:53Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "879a68baaf1808e63e0ada54831fba6131ac7bfe",
          "body": null,
          "is_bot": false,
          "headline": "Parse confidence value from nextstrain tree",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-12-06T22:14:32Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "40ae0312eb25c9467def7b852ce459715d71411a",
          "body": null,
          "is_bot": false,
          "headline": "Optimized update of the closest tip pairs in prune --diversity --random",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-10-22T17:29:05Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "ad827fed30ab316d8fe6acb3d2843b98f69abc8c",
          "body": "…rsity",
          "is_bot": false,
          "headline": "Added tree pruning keeping diversity gotree prune --random <x> --dive…",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-10-22T15:53:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "42685fa03b646356cfe6d743ad34b6c32ff9c6df",
          "body": "…nodes",
          "is_bot": false,
          "headline": "Added Closest Tips information (from each node+tips) in gotree stats …",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-10-22T11:57:24Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fe655a1d10e4984290a8d9d392a1203a277db740",
          "body": null,
          "is_bot": false,
          "headline": "Updated logo",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-10-09T08:05:51Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "774366bd09c82c9497b7e35c952ee2eadce85703",
          "body": null,
          "is_bot": false,
          "headline": "Added option --rooted to gotree resolve",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-07-09T15:18:55Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "ad36c89db283c22e57fa08028a8ba9073b409ca1",
          "body": null,
          "is_bot": false,
          "headline": "Added lines for rates in gotree rtt",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-07-09T13:11:45Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "344555820752eb3a589a66ebc41db08fa8332be5",
          "body": null,
          "is_bot": false,
          "headline": "Updated rtt to plot internal nodes and tips with different colors",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-07-09T10:50:26Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "0a833f3b6c63ad1e025ed97db6571564e02fec3e",
          "body": "- updated the date parsing function to work with yyy-mm-dd dates",
          "is_bot": false,
          "headline": "- Added option to gotree rtt for selecting tips only",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-07-08T17:05:43Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a9b778702cbc3b08a4eae01cfc149e33e5bf446d",
          "body": null,
          "is_bot": false,
          "headline": "Added rtt command",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-07-03T08:51:56Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "fd00168e4a39916375acaa40f684108509ec5ab8",
          "body": null,
          "is_bot": false,
          "headline": "Updated date parsing",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-06-25T16:04:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e2bf76bc7820ebda891d4508a2058e798e08cf8e",
          "body": "…d postOrderRecur",
          "is_bot": false,
          "headline": "Added option --subtrees to gotree annotate + updated preOrderRecur an…",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-06-05T12:08:56Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a0ef8849bde0449763d552d5406f58e1bf1f7477",
          "body": null,
          "is_bot": false,
          "headline": "Corrected reroot outgroup with a 0 length branch",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2025-05-09T16:29:21Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a631422dbed3e92c91a1b27c2f8e3a24dfbc63f7",
          "body": null,
          "is_bot": false,
          "headline": "Added doc + test",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-09-26T19:44:29Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "bdbd8f1fb4f01a6dbef13a2a97530f95011bd1ba",
          "body": null,
          "is_bot": false,
          "headline": "Renamed gotree prune date to cut date",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-09-26T19:17:43Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "de3a2f0cba1706eb75d6e620a35224fc729be183",
          "body": null,
          "is_bot": false,
          "headline": "Added max-date to gotree prune date",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-09-26T19:11:04Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "69fcc189c6eba071f6e2e255f49befe6f596f903",
          "body": null,
          "is_bot": false,
          "headline": "Added cut min date command (gotree prune date --min-date)",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-09-26T17:38:24Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1b3333276c155191877693d4e5501f4d7783d5b2",
          "body": null,
          "is_bot": false,
          "headline": "Moved dates functions",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-09-26T15:10:11Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7dfcea6fb113c06ead381e17532225d3318f55e3",
          "body": null,
          "is_bot": false,
          "headline": "Merge branch 'master' of github.com:fredericlemoine/gotree",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-07-04T11:59:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "56d00aab23f035142481446c97b1b5fa00e65910",
          "body": "Use a shebang to enforce running test.sh in bash",
          "is_bot": false,
          "headline": "Merge pull request #24 from krtab/shebang",
          "author_name": "fredericlemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-04-29T11:48:17Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "f44057354b2cc75e3e569244ff2920203eb51acf",
          "body": "Commit b959a7f3eccdebda804206232a37f1d651f5dd5c was made because\n`test.sh` cannot run on systems where the default shell is not bash\ncompatible (e.g. zsh). (cf https://github.com/evolbioinfo/gotree/pull/23)\n\nA [shebang](https://en.wikipedia.org/wiki/Shebang_(Unix)) allows to\nforce the use of bash to interpret the shell script. This version\nusing `/usr/bin/env` should be the most portable.",
          "is_bot": false,
          "headline": "Use a shebang to enforce running test.sh in bash",
          "author_name": "Arthur Carcano",
          "author_login": "krtab",
          "committed_at": "2024-04-29T08:06:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "c8ec0e01417400a2d1a0ec8abcb064693a8a7450",
          "body": "Fixing newick parsing",
          "is_bot": false,
          "headline": "Merge pull request #23 from lucblassel/trailing_whitespace",
          "author_name": "fredericlemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-04-29T07:13:46Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b959a7f3eccdebda804206232a37f1d651f5dd5c",
          "body": null,
          "is_bot": false,
          "headline": "Specifying bash as test.sh language",
          "author_name": "Luc Blassel",
          "author_login": "lucblassel",
          "committed_at": "2024-04-28T09:40:24Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9f0bbccb9b4cd4693e1c70e3a4ae90fc222ce863",
          "body": null,
          "is_bot": false,
          "headline": "Fixing newick parsing to accepts trailing whitespace after semicolon",
          "author_name": "Luc Blassel",
          "author_login": "lucblassel",
          "committed_at": "2024-04-28T09:37:44Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b324e738b1ac3e3bb1945f50fb40132a9fbc2b5b",
          "body": null,
          "is_bot": false,
          "headline": "Added options min-len and max-len to gotree brlen setrand",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-02-26T22:28:08Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "df34e913b4917e0a41a02bb491d8d66de32df979",
          "body": null,
          "is_bot": false,
          "headline": "Corrected equal min dist branches in transfer index",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-02-08T16:14:34Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "d6c626874c559d93c306d5456aee1a01c6b740a8",
          "body": null,
          "is_bot": false,
          "headline": "Added --terminal option to comment comment clear",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-02-08T13:49:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8907260e4c8dcd1d05837bed784ea03552ebcd33",
          "body": null,
          "is_bot": false,
          "headline": "Updated README",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-01-23T13:34:04Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4ded0776cdcec88cd534111963802c54a780b161",
          "body": null,
          "is_bot": false,
          "headline": "Updated go to 1.21.6",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-01-18T15:24:02Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6b21f2da063df024311a5e6b0122e4d24c837a27",
          "body": null,
          "is_bot": false,
          "headline": "Added missing file for option --eems",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-01-16T09:24:34Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b1a0a7146c8de242a3471fd8ccb47e5e0b9c3608",
          "body": null,
          "is_bot": false,
          "headline": "Corrected output of compute mutations --eem",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-01-15T22:57:44Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "72dcae63e87b12dcd94391f03d8bc218b8afd102",
          "body": null,
          "is_bot": false,
          "headline": "Added option --eems to goalign compute mutations",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2024-01-15T22:53:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "7794869d6c5b00429ed52320f0d554f535f88915",
          "body": null,
          "is_bot": false,
          "headline": "Added option --avg to gotree matrix",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-12-19T15:48:15Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8ba91256ec5a2f98fd2f8cc80904f4df998a2761",
          "body": "…tations",
          "is_bot": false,
          "headline": "gotree ltt takes node dates from the tree if present, otherwise in mu…",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-30T15:21:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6e5bc94a1f907cc9a7fce43b03cae1f9b4caac51",
          "body": null,
          "is_bot": false,
          "headline": "Remove debug",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-30T15:19:52Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "dcc8ecad99d2a2310ee9f2e25593ad7f55e96887",
          "body": null,
          "is_bot": false,
          "headline": "Corrected gotree brlen add parameter name",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-29T15:28:16Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "48b98ab9ce78ca304df84c6a94cc5fa51ef950c3",
          "body": null,
          "is_bot": false,
          "headline": "Added gotree brlen add command",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-29T15:27:07Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e903d370c0dfd5c72fc454c388e6ba73fc8d88b0",
          "body": null,
          "is_bot": false,
          "headline": "Added ltt test",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-28T16:05:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4b435e03559aa29c3d3d8bb1b97d0a098ee9e780",
          "body": null,
          "is_bot": false,
          "headline": "Updated README",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-28T15:57:35Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "6d8d3780462087df625c6c89091d0aa91549b333",
          "body": null,
          "is_bot": false,
          "headline": "Updated doc for gotree ltt",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-28T15:31:48Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8024b9625cd90d43bda1d9cadb38e62933472039",
          "body": null,
          "is_bot": false,
          "headline": "Corrected ltt plot",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-28T15:31:20Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4eb6d87fe3536ba6af54986d5507445cb1d9c9b0",
          "body": "…plot",
          "is_bot": false,
          "headline": "Added command gotree ltt : write lineage through time data, and draw …",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-28T14:56:25Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "37b384c43c9caa9041c008d0656717859307fef6",
          "body": null,
          "is_bot": false,
          "headline": "Deduplicated same x lab points in gotree ltt",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-21T11:15:17Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "52f0d9fe9007f7227a3d3fb50009de8039a475fc",
          "body": null,
          "is_bot": false,
          "headline": "Added ltt command",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-21T10:49:33Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9216c7b59efcaea45f9fc84f04810298e8930312",
          "body": null,
          "is_bot": false,
          "headline": "Updated gotree collapse name doc",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-13T10:39:58Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "de95a71314a6806abec6644a64861971a52b6c52",
          "body": null,
          "is_bot": false,
          "headline": "Merge branch 'master' into dev",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-12T15:28:22Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "0b9f8fa0a45d2498011ff47afd0801802bee401e",
          "body": null,
          "is_bot": false,
          "headline": "Added command : gotree collapse name",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-11-12T15:27:32Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "753a65f4fd977d03e6f777a818983d172328b98c",
          "body": "… tip names #9",
          "is_bot": false,
          "headline": "Reverted support for quotes in comments, because of pb with quotes in…",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-10-04T15:40:15Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "c7e2aa160735f39e290450cf11f4ee0a415159d5",
          "body": null,
          "is_bot": false,
          "headline": "Updated newick parser to allow ';' in comments",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-09-14T12:38:09Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "b7837b643e8136617289f863710fcf756890b7a1",
          "body": "…uotes",
          "is_bot": false,
          "headline": "Updated parser to take into account comments enclosed within single q…",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-09-13T09:35:13Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "76f7e3981d033877e71a4ee2683b00951d703bfe",
          "body": null,
          "is_bot": false,
          "headline": "Added command : gotree extract mutations",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-09-06T14:21:03Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "46057ab0dfaabce8217e0dc8f80fa5c30297963e",
          "body": null,
          "is_bot": false,
          "headline": "Updated doc",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-05-31T15:03:01Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "55e4727dd1beba20b3c9a543c1306707f89b982c",
          "body": null,
          "is_bot": false,
          "headline": "Updated +golang.org/x/sys",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-05-31T14:52:21Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "ac4c61dc7ff0afbb694ab4cf4ee03062733ce8a9",
          "body": null,
          "is_bot": false,
          "headline": "Updated +golang.org/x/image",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-05-31T14:49:57Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a61803bb4eecd504ec35f1594fa44253be79bbb2",
          "body": "…i has been modified: Tree functions have been updated",
          "is_bot": false,
          "headline": "Added options --internal / --external to gotree brlen subcommands. ap…",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-05-31T14:43:44Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "a77e6775ba1f61d8c951072e32712eac6f6df76c",
          "body": null,
          "is_bot": false,
          "headline": "Added the test described in #20 (by @lucblassel )",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-05-24T21:19:13Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "9404121b428bf7987ae8fe75020319bb99f0a2c2",
          "body": "Adding branch length aware metrics to `gotree compare trees`",
          "is_bot": false,
          "headline": "Merge pull request #20 from lucblassel/master",
          "author_name": "fredericlemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-05-24T21:10:26Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "17b4a0c49078318c04229e0ab577a9b244732070",
          "body": null,
          "is_bot": false,
          "headline": "Adding weighted to compare trees command doc",
          "author_name": "Luc Blassel",
          "author_login": "lucblassel",
          "committed_at": "2023-05-24T18:18:56Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "16bb1aed47fd01b45169bc67bb42e28371a44349",
          "body": "… trees`",
          "is_bot": false,
          "headline": "Adding branch-length aware tree comparison metrics to `gotree compare…",
          "author_name": "Luc Blassel",
          "author_login": "lucblassel",
          "committed_at": "2023-05-24T18:11:23Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "287cf3370bc133bef16cf1383ecb5c3a96450a68",
          "body": "…umeric order)",
          "is_bot": false,
          "headline": "gotree matrix now outputs matrices with always the same order (alphan…",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-05-24T14:23:29Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "1b5691f7885e94f4a7226d32eabf663c59124833",
          "body": null,
          "is_bot": false,
          "headline": "Updated gotree matrix --metric boot to consider tip branches",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-04-13T16:33:36Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "26ea287f5520a622168c4d469a9dc325b01ad530",
          "body": null,
          "is_bot": false,
          "headline": "Added option --metric to 'gotree matrix' command",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-04-13T12:44:43Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "4fb145be26f38ec0c79188dda9316fedff9c4f5e",
          "body": null,
          "is_bot": false,
          "headline": "Corrected tindex computation for very distant bootstrap trees",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-02-14T15:04:11Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "65824c184df7d62a3210335aa9ae5a259ea18278",
          "body": null,
          "is_bot": false,
          "headline": "removed test temp file",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-01-12T10:11:34Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "26c8903c0d97e5f96d7c63dfc9e564fe7a66de24",
          "body": null,
          "is_bot": false,
          "headline": "Removed cpuprof file",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-01-12T10:10:47Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "2a6c6e350b3565dafc639f367c67f4b62904a69f",
          "body": null,
          "is_bot": false,
          "headline": "Merge Makefile",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-01-12T10:05:00Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "3d3716b2a7bc1d7396460159499aac43d9d2f3e4",
          "body": null,
          "is_bot": false,
          "headline": "Modified bin names in deploy",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-01-12T09:58:12Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "e71b949028e0444a064b34f5786316d675166c8f",
          "body": null,
          "is_bot": false,
          "headline": "Updated Makefile",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2023-01-02T12:22:07Z",
          "body_truncated": false,
          "is_coding_agent": false
        },
        {
          "oid": "8eed8eb08920fd9574ee37886083a38a7620d842",
          "body": null,
          "is_bot": false,
          "headline": "Updated Makefile",
          "author_name": "Frederic Lemoine",
          "author_login": "fredericlemoine",
          "committed_at": "2022-12-09T11:17:06Z",
          "body_truncated": false,
          "is_coding_agent": false
        }
      ],
      "releases_count": 53,
      "commits_last_year": 36,
      "latest_release_at": "2026-07-15T15:30:34Z",
      "latest_release_tag": "v0.5.2",
      "releases_from_tags": false,
      "days_since_last_push": 7,
      "active_weeks_last_year": 10,
      "days_since_latest_release": 6,
      "mean_days_between_releases": 217
    },
    "community": {
      "has_readme": true,
      "has_license": true,
      "has_description": true,
      "has_contributing": false,
      "health_percentage": 37,
      "has_issue_template": false,
      "has_code_of_conduct": false,
      "has_pull_request_template": false
    },
    "ecosystem": {
      "packages": [
        {
          "name": "github.com/evolbioinfo/gotree",
          "exists": true,
          "license": null,
          "keywords": [],
          "ecosystem": "go",
          "matches_repo": true,
          "registry_url": "https://pkg.go.dev/github.com/evolbioinfo/gotree",
          "is_deprecated": false,
          "latest_version": "v0.5.2",
          "repository_url": "https://github.com/evolbioinfo/gotree",
          "versions_count": 40,
          "total_downloads": null,
          "dependents_count": null,
          "deprecation_note": null,
          "maintainers_count": null,
          "monthly_downloads": null,
          "first_published_at": null,
          "latest_published_at": "2026-06-30T07:47:09Z",
          "latest_version_yanked": null,
          "days_since_latest_publish": 22
        }
      ]
    },
    "popularity": {
      "forks": 19,
      "stars": 150,
      "watchers": 11,
      "fork_history": {
        "days": [
          {
            "date": "2018-12-10",
            "count": 1
          },
          {
            "date": "2018-12-16",
            "count": 1
          },
          {
            "date": "2019-04-04",
            "count": 1
          },
          {
            "date": "2020-04-07",
            "count": 1
          },
          {
            "date": "2021-01-27",
            "count": 2
          },
          {
            "date": "2021-03-08",
            "count": 1
          },
          {
            "date": "2021-10-28",
            "count": 1
          },
          {
            "date": "2021-12-03",
            "count": 1
          },
          {
            "date": "2022-04-28",
            "count": 1
          },
          {
            "date": "2022-05-24",
            "count": 1
          },
          {
            "date": "2022-05-26",
            "count": 1
          },
          {
            "date": "2022-12-05",
            "count": 1
          },
          {
            "date": "2023-09-26",
            "count": 1
          },
          {
            "date": "2024-04-29",
            "count": 1
          },
          {
            "date": "2024-11-05",
            "count": 1
          },
          {
            "date": "2026-04-14",
            "count": 1
          },
          {
            "date": "2026-04-22",
            "count": 1
          },
          {
            "date": "2026-06-30",
            "count": 1
          }
        ],
        "complete": true,
        "collected": 19,
        "total_forks": 19
      },
      "star_history": null,
      "open_issues_and_prs": 2
    },
    "ai_readiness": {
      "has_nix": false,
      "example_dirs": [],
      "has_llms_txt": false,
      "has_dockerfile": false,
      "has_mcp_signal": false,
      "bootstrap_files": [
        "Makefile"
      ],
      "api_schema_files": [],
      "has_devcontainer": false,
      "typecheck_configs": [],
      "toolchain_manifests": [
        "go.mod"
      ],
      "largest_source_bytes": 61630,
      "source_files_sampled": 180,
      "oversized_source_files": 1,
      "agent_instruction_files": [],
      "agent_instruction_max_bytes": null
    },
    "dependencies": {
      "manifests": [
        "go.mod"
      ],
      "advisories": {
        "error": null,
        "scope": "repository_graph",
        "source": "osv",
        "findings": [
          {
            "name": "golang.org/x/image",
            "direct": true,
            "version": "v0.11.0",
            "severity": "high",
            "ecosystem": "go",
            "cvss_score": 7.5,
            "advisory_ids": [
              "GHSA-44p7-9xx4-hf2g",
              "GHSA-9phm-fm57-rhg8",
              "GHSA-q675-qj96-32m9",
              "GO-2024-2937",
              "GO-2026-4815",
              "GO-2026-4961",
              "GO-2026-4962",
              "GO-2026-5031",
              "GO-2026-5032",
              "GO-2026-5061"
            ],
            "fixed_version": "0.43.0",
            "advisory_count": 12,
            "oldest_advisory_days": 756
          },
          {
            "name": "github.com/ulikunitz/xz",
            "direct": false,
            "version": "v0.5.10",
            "severity": "moderate",
            "ecosystem": "go",
            "cvss_score": 5.3,
            "advisory_ids": [
              "GHSA-jc7w-c686-c4v9",
              "GO-2025-3922"
            ],
            "fixed_version": "0.5.15",
            "advisory_count": 2,
            "oldest_advisory_days": 327
          },
          {
            "name": "golang.org/x/sys",
            "direct": false,
            "version": "v0.11.0",
            "severity": "unknown",
            "ecosystem": "go",
            "cvss_score": null,
            "advisory_ids": [
              "GO-2026-5024"
            ],
            "fixed_version": "0.44.0",
            "advisory_count": 1,
            "oldest_advisory_days": 60
          },
          {
            "name": "golang.org/x/text",
            "direct": false,
            "version": "v0.12.0",
            "severity": "unknown",
            "ecosystem": "go",
            "cvss_score": null,
            "advisory_ids": [
              "GO-2026-5970"
            ],
            "fixed_version": "0.39.0",
            "advisory_count": 1,
            "oldest_advisory_days": 7
          }
        ],
        "collected": true,
        "malicious": [],
        "truncated": false,
        "by_severity": {
          "high": 1,
          "unknown": 2,
          "moderate": 1
        },
        "advisory_count": 16,
        "affected_count": 4,
        "assessed_count": 39,
        "malicious_count": 0,
        "assessed_package": null,
        "unassessed_count": 0,
        "direct_affected_count": 1
      },
      "ecosystems": [
        "go"
      ],
      "dependencies": [
        {
          "name": "github.com/ajstarks/svgo",
          "manifest": "go.mod",
          "ecosystem": "go",
          "version_constraint": "v0.0.0-20211024235047-1546f124cd8b"
        },
        {
          "name": "github.com/evolbioinfo/goalign",
          "manifest": "go.mod",
          "ecosystem": "go",
          "version_constraint": "v0.3.7-0.20230906113011-fcecb09f9d43"
        },
        {
          "name": "github.com/fredericlemoine/bitset",
          "manifest": "go.mod",
          "ecosystem": "go",
          "version_constraint": "v1.2.0"
        },
        {
          "name": "github.com/fredericlemoine/cobrashell",
          "manifest": "go.mod",
          "ecosystem": "go",
          "version_constraint": "v0.0.0-20180921081141-49c72f93426c"
        },
        {
          "name": "github.com/fredericlemoine/gostats",
          "manifest": "go.mod",
          "ecosystem": "go",
          "version_constraint": "v0.2.0"
        },
        {
          "name": "github.com/golang/freetype",
          "manifest": "go.mod",
          "ecosystem": "go",
          "version_constraint": "v0.0.0-20170609003504-e2365dfdc4a0"
        },
        {
          "name": "github.com/jlaffaye/ftp",
          "manifest": "go.mod",
          "ecosystem": "go",
          "version_constraint": "v0.0.0-20210307004419-5d4190119067"
        },
        {
          "name": "github.com/llgcode/draw2d",
          "manifest": "go.mod",
          "ecosystem": "go",
          "version_constraint": "v0.0.0-20210313082411-577c1ead272a"
        },
        {
          "name": "github.com/spf13/cobra",
          "manifest": "go.mod",
          "ecosystem": "go",
          "version_constraint": "v1.5.0"
        },
        {
          "name": "golang.org/x/image",
          "manifest": "go.mod",
          "ecosystem": "go",
          "version_constraint": "v0.11.0"
        },
        {
          "name": "gonum.org/v1/plot",
          "manifest": "go.mod",
          "ecosystem": "go",
          "version_constraint": "v0.14.0"
        }
      ],
      "all_dependencies": {
        "error": null,
        "source": "github-sbom",
        "packages": [
          {
            "name": "github.com/ajstarks/svgo",
            "direct": true,
            "version": "v0.0.0-20211024235047-1546f124cd8b",
            "ecosystem": "go"
          },
          {
            "name": "github.com/evolbioinfo/goalign",
            "direct": true,
            "version": "v0.3.7-0.20230906113011-fcecb09f9d43",
            "ecosystem": "go"
          },
          {
            "name": "github.com/fredericlemoine/bitset",
            "direct": true,
            "version": "v1.2.0",
            "ecosystem": "go"
          },
          {
            "name": "github.com/fredericlemoine/cobrashell",
            "direct": true,
            "version": "v0.0.0-20180921081141-49c72f93426c",
            "ecosystem": "go"
          },
          {
            "name": "github.com/fredericlemoine/gostats",
            "direct": true,
            "version": "v0.2.0",
            "ecosystem": "go"
          },
          {
            "name": "github.com/golang/freetype",
            "direct": true,
            "version": "v0.0.0-20170609003504-e2365dfdc4a0",
            "ecosystem": "go"
          },
          {
            "name": "github.com/jlaffaye/ftp",
            "direct": true,
            "version": "v0.0.0-20210307004419-5d4190119067",
            "ecosystem": "go"
          },
          {
            "name": "github.com/llgcode/draw2d",
            "direct": true,
            "version": "v0.0.0-20210313082411-577c1ead272a",
            "ecosystem": "go"
          },
          {
            "name": "github.com/spf13/cobra",
            "direct": true,
            "version": "v1.5.0",
            "ecosystem": "go"
          },
          {
            "name": "golang.org/x/image",
            "direct": true,
            "version": "v0.11.0",
            "ecosystem": "go"
          },
          {
            "name": "gonum.org/v1/plot",
            "direct": true,
            "version": "v0.14.0",
            "ecosystem": "go"
          },
          {
            "name": "gioui.org",
            "direct": false,
            "version": "v0.2.0",
            "ecosystem": "go"
          },
          {
            "name": "gioui.org/cpu",
            "direct": false,
            "version": "v0.0.0-20220412190645-f1e9e8c3b1f7",
            "ecosystem": "go"
          },
          {
            "name": "gioui.org/shader",
            "direct": false,
            "version": "v1.0.6",
            "ecosystem": "go"
          },
          {
            "name": "gioui.org/x",
            "direct": false,
            "version": "v0.2.0",
            "ecosystem": "go"
          },
          {
            "name": "git.sr.ht/~sbinet/gg",
            "direct": false,
            "version": "v0.5.0",
            "ecosystem": "go"
          },
          {
            "name": "github.com/abiosoft/ishell",
            "direct": false,
            "version": "v2.0.0+incompatible",
            "ecosystem": "go"
          },
          {
            "name": "github.com/abiosoft/readline",
            "direct": false,
            "version": "v0.0.0-20180607040430-155bce2042db",
            "ecosystem": "go"
          },
          {
            "name": "github.com/andybalholm/stroke",
            "direct": false,
            "version": "v0.0.0-20221221101821-bd29b49d73f0",
            "ecosystem": "go"
          },
          {
            "name": "github.com/armon/go-radix",
            "direct": false,
            "version": "v1.0.0",
            "ecosystem": "go"
          },
          {
            "name": "github.com/campoy/embedmd",
            "direct": false,
            "version": "v1.0.0",
            "ecosystem": "go"
          },
          {
            "name": "github.com/fatih/color",
            "direct": false,
            "version": "v1.10.0",
            "ecosystem": "go"
          },
          {
            "name": "github.com/flynn-archive/go-shlex",
            "direct": false,
            "version": "v0.0.0-20150515145356-3f9db97f8568",
            "ecosystem": "go"
          },
          {
            "name": "github.com/go-fonts/liberation",
            "direct": false,
            "version": "v0.3.1",
            "ecosystem": "go"
          },
          {
            "name": "github.com/go-latex/latex",
            "direct": false,
            "version": "v0.0.0-20230307184459-12ec69307ad9",
            "ecosystem": "go"
          },
          {
            "name": "github.com/go-pdf/fpdf",
            "direct": false,
            "version": "v0.8.0",
            "ecosystem": "go"
          },
          {
            "name": "github.com/go-text/typesetting",
            "direct": false,
            "version": "v0.0.0-20230803102845-24e03d8b5372",
            "ecosystem": "go"
          },
          {
            "name": "github.com/inconshreveable/mousetrap",
            "direct": false,
            "version": "v1.0.1",
            "ecosystem": "go"
          },
          {
            "name": "github.com/mattn/go-colorable",
            "direct": false,
            "version": "v0.1.8",
            "ecosystem": "go"
          },
          {
            "name": "github.com/mattn/go-isatty",
            "direct": false,
            "version": "v0.0.12",
            "ecosystem": "go"
          },
          {
            "name": "github.com/pmezard/go-difflib",
            "direct": false,
            "version": "v1.0.0",
            "ecosystem": "go"
          },
          {
            "name": "github.com/spf13/pflag",
            "direct": false,
            "version": "v1.0.5",
            "ecosystem": "go"
          },
          {
            "name": "github.com/ulikunitz/xz",
            "direct": false,
            "version": "v0.5.10",
            "ecosystem": "go"
          },
          {
            "name": "golang.org/x/exp",
            "direct": false,
            "version": "v0.0.0-20230801115018-d63ba01acd4b",
            "ecosystem": "go"
          },
          {
            "name": "golang.org/x/exp/shiny",
            "direct": false,
            "version": "v0.0.0-20230801115018-d63ba01acd4b",
            "ecosystem": "go"
          },
          {
            "name": "golang.org/x/sys",
            "direct": false,
            "version": "v0.11.0",
            "ecosystem": "go"
          },
          {
            "name": "golang.org/x/text",
            "direct": false,
            "version": "v0.12.0",
            "ecosystem": "go"
          },
          {
            "name": "gonum.org/v1/gonum",
            "direct": false,
            "version": "v0.14.0",
            "ecosystem": "go"
          },
          {
            "name": "rsc.io/pdf",
            "direct": false,
            "version": "v0.1.1",
            "ecosystem": "go"
          }
        ],
        "collected": true,
        "truncated": false,
        "total_count": 39,
        "direct_count": 11,
        "indirect_count": 28
      }
    },
    "maintainership": {
      "issues": {
        "open_prs": 0,
        "merged_prs": 9,
        "open_issues": 2,
        "closed_ratio": 0.905,
        "closed_issues": 19,
        "closed_unmerged_prs": 0
      },
      "bus_factor": 1,
      "bot_contributors": 1,
      "top_contributors": [
        {
          "type": "User",
          "login": "fredericlemoine",
          "commits": 818,
          "avatar_url": "https://avatars.githubusercontent.com/u/16349382?v=4"
        },
        {
          "type": "User",
          "login": "lucblassel",
          "commits": 9,
          "avatar_url": "https://avatars.githubusercontent.com/u/30524113?v=4"
        },
        {
          "type": "User",
          "login": "albertyw",
          "commits": 1,
          "avatar_url": "https://avatars.githubusercontent.com/u/3151040?v=4"
        },
        {
          "type": "User",
          "login": "krtab",
          "commits": 1,
          "avatar_url": "https://avatars.githubusercontent.com/u/53921575?v=4"
        },
        {
          "type": "User",
          "login": "Jah-yee",
          "commits": 1,
          "avatar_url": "https://avatars.githubusercontent.com/u/166608075?v=4"
        }
      ],
      "contributors_sampled": 5,
      "top_contributor_share": 0.986
    },
    "quality_signals": {
      "has_ci": true,
      "has_tests": true,
      "ci_workflows": [
        "go.yml"
      ],
      "has_docs_dir": true,
      "linter_configs": [],
      "has_editorconfig": false,
      "has_linter_config": false,
      "has_precommit_config": false
    },
    "security_signals": {
      "lockfiles": [
        "go.sum"
      ],
      "scorecard": {
        "checks": [
          {
            "name": "Binary-Artifacts",
            "score": 10,
            "reason": "no binaries found in the repo",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#binary-artifacts"
          },
          {
            "name": "Branch-Protection",
            "score": null,
            "reason": "internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#branch-protection"
          },
          {
            "name": "CI-Tests",
            "score": 10,
            "reason": "3 out of 3 merged PRs checked by a CI test -- score normalized to 10",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#ci-tests"
          },
          {
            "name": "CII-Best-Practices",
            "score": 0,
            "reason": "no effort to earn an OpenSSF best practices badge detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#cii-best-practices"
          },
          {
            "name": "Code-Review",
            "score": 0,
            "reason": "Found 1/19 approved changesets -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#code-review"
          },
          {
            "name": "Contributors",
            "score": 6,
            "reason": "project has 2 contributing companies or organizations -- score normalized to 6",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#contributors"
          },
          {
            "name": "Dangerous-Workflow",
            "score": 10,
            "reason": "no dangerous workflow patterns detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dangerous-workflow"
          },
          {
            "name": "Dependency-Update-Tool",
            "score": 0,
            "reason": "no update tool detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dependency-update-tool"
          },
          {
            "name": "Fuzzing",
            "score": 0,
            "reason": "project is not fuzzed",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#fuzzing"
          },
          {
            "name": "License",
            "score": 10,
            "reason": "license file detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#license"
          },
          {
            "name": "Maintained",
            "score": 5,
            "reason": "6 commit(s) and 1 issue activity found in the last 90 days -- score normalized to 5",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#maintained"
          },
          {
            "name": "Packaging",
            "score": null,
            "reason": "packaging workflow not detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#packaging"
          },
          {
            "name": "Pinned-Dependencies",
            "score": 0,
            "reason": "dependency not pinned by hash detected -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#pinned-dependencies"
          },
          {
            "name": "SAST",
            "score": 0,
            "reason": "SAST tool is not run on all commits -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#sast"
          },
          {
            "name": "Security-Policy",
            "score": 0,
            "reason": "security policy file not detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#security-policy"
          },
          {
            "name": "Signed-Releases",
            "score": 0,
            "reason": "Project has not signed or included provenance with any releases.",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#signed-releases"
          },
          {
            "name": "Token-Permissions",
            "score": 0,
            "reason": "detected GitHub workflow tokens with excessive permissions",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#token-permissions"
          },
          {
            "name": "Vulnerabilities",
            "score": 0,
            "reason": "12 existing vulnerabilities detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#vulnerabilities"
          }
        ],
        "commit": "8ce3ce6eb5b14261b0be7ed2b1b02bcf22dfc305",
        "ran_at": "2026-07-22T15:26:42Z",
        "aggregate_score": 3,
        "scorecard_version": "v5.5.0"
      },
      "has_codeql_workflow": false,
      "has_security_policy": false,
      "has_dependabot_config": false
    },
    "contribution_flow": {
      "collected": true,
      "ci_last_run_at": "2026-07-03T15:23:46Z",
      "oldest_open_prs": [],
      "last_merged_pr_at": "2026-06-30T07:23:04Z",
      "ci_last_conclusion": "SUCCESS",
      "oldest_open_issues": [
        {
          "number": 18,
          "created_at": "2022-03-14T03:00:34Z",
          "last_comment_at": null,
          "last_comment_author": null
        },
        {
          "number": 25,
          "created_at": "2024-05-30T13:12:15Z",
          "last_comment_at": null,
          "last_comment_author": null
        }
      ]
    }
  },
  "config": {
    "disabled_metrics": [],
    "disabled_categories": [],
    "disabled_components": {}
  },
  "source": {
    "url": "https://github.com/evolbioinfo/gotree",
    "host": "github.com",
    "name": "gotree",
    "owner": "evolbioinfo"
  },
  "metrics": {
    "overall": {
      "key": "overall",
      "band": "moderate",
      "name": "Overall health",
      "note": null,
      "notes": [],
      "value": 61,
      "inputs": {
        "security": 37,
        "vitality": 68,
        "community": 51,
        "governance": 63,
        "engineering": 81
      },
      "components": []
    },
    "categories": [
      {
        "key": "vitality",
        "band": "moderate",
        "name": "Vitality",
        "value": 68,
        "weight": 0.22,
        "metrics": [
          {
            "key": "development_activity",
            "band": "moderate",
            "name": "Development activity",
            "note": null,
            "notes": [],
            "value": 62,
            "inputs": {
              "commits_last_year": 36,
              "human_commit_share": 0.95,
              "days_since_last_push": 7,
              "active_weeks_last_year": 10
            },
            "components": [
              {
                "key": "push_recency",
                "name": "Push recency",
                "detail": "last push 7 days ago",
                "points": 36,
                "status": "met",
                "details": [
                  {
                    "code": "push_recency",
                    "params": {
                      "days": 7
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_cadence",
                "name": "Commit cadence",
                "detail": "10/52 weeks with commits",
                "points": 6.9,
                "status": "partial",
                "details": [
                  {
                    "code": "commit_cadence_weeks",
                    "params": {
                      "weeks": 10
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_volume",
                "name": "Commit volume",
                "detail": "36 commits in the last year",
                "points": 14.1,
                "status": "partial",
                "details": [
                  {
                    "code": "commits_last_year",
                    "params": {
                      "count": 36
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "openssf_scorecard_maintained",
                "name": "OpenSSF Scorecard: Maintained",
                "detail": "6 commit(s) and 1 issue activity found in the last 90 days -- score normalized to 5",
                "points": 5,
                "status": "partial",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "release_discipline",
            "band": "good",
            "name": "Release discipline",
            "note": null,
            "notes": [],
            "value": 76,
            "inputs": {
              "releases_count": 53,
              "latest_release_tag": "v0.5.2",
              "releases_from_tags": false,
              "days_since_latest_release": 6,
              "mean_days_between_releases": 217
            },
            "components": [
              {
                "key": "ships_releases",
                "name": "Ships releases",
                "detail": "53 releases published",
                "points": 27,
                "status": "met",
                "details": [
                  {
                    "code": "releases_published",
                    "params": {
                      "count": 53
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "release_recency",
                "name": "Release recency",
                "detail": "latest release 6 days ago",
                "points": 36,
                "status": "met",
                "details": [
                  {
                    "code": "release_recency",
                    "params": {
                      "days": 6
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "release_cadence",
                "name": "Release cadence",
                "detail": "a release every ~217 days",
                "points": 12.6,
                "status": "partial",
                "details": [
                  {
                    "code": "release_cadence",
                    "params": {
                      "gap": 217
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "openssf_scorecard_signed_releases",
                "name": "OpenSSF Scorecard: Signed-Releases",
                "detail": "Project has not signed or included provenance with any releases.",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "abandonment",
            "band": "excellent",
            "name": "Abandonment",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "cap": null,
              "state": "maintained",
              "guards": [],
              "signals": [],
              "red_flag": false,
              "multiplier_pct": 100,
              "declared_reason": null,
              "unverified_reason": null,
              "unanswered_open_prs": null,
              "unanswered_open_issues": null,
              "days_since_last_merged_pr": null,
              "days_since_last_human_commit": 22,
              "days_since_last_human_commit_is_floor": false
            },
            "components": [
              {
                "key": "project_is_still_maintained",
                "name": "Project is still maintained",
                "detail": "last human commit 22 days ago",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "abandonment_maintained",
                    "params": {
                      "days": 22
                    }
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Is the project alive — is code being written and are releases shipping?"
      },
      {
        "key": "community",
        "band": "moderate",
        "name": "Community & Adoption",
        "value": 51,
        "weight": 0.18,
        "metrics": [
          {
            "key": "popularity",
            "band": "moderate",
            "name": "Popularity & adoption",
            "note": null,
            "notes": [],
            "value": 51,
            "inputs": {
              "forks": 19,
              "stars": 150,
              "watchers": 11,
              "growth_state": "unverified",
              "growth_factor_pct": 100,
              "growth_unverified_reason": "no_history"
            },
            "components": [
              {
                "key": "stars",
                "name": "Stars",
                "detail": "150 stars",
                "points": 35.3,
                "status": "partial",
                "details": [
                  {
                    "code": "stars",
                    "params": {
                      "count": 150
                    }
                  }
                ],
                "max_points": 60
              },
              {
                "key": "forks",
                "name": "Forks",
                "detail": "19 forks",
                "points": 10.5,
                "status": "partial",
                "details": [
                  {
                    "code": "forks",
                    "params": {
                      "count": 19
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "watchers",
                "name": "Watchers",
                "detail": "11 watchers",
                "points": 5.6,
                "status": "partial",
                "details": [
                  {
                    "code": "watchers",
                    "params": {
                      "count": 11
                    }
                  }
                ],
                "max_points": 15
              }
            ]
          },
          {
            "key": "community_health",
            "band": "moderate",
            "name": "Community health",
            "note": null,
            "notes": [],
            "value": 50,
            "inputs": {
              "has_readme": true,
              "has_license": true,
              "has_contributing": false,
              "has_issue_template": false,
              "has_code_of_conduct": false,
              "has_pull_request_template": false
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 22.5,
                "status": "met",
                "details": [],
                "max_points": 22.5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "recognized license (GPL-2.0)",
                "points": 22.5,
                "status": "met",
                "details": [
                  {
                    "code": "license_standard",
                    "params": {}
                  },
                  {
                    "code": "license_spdx",
                    "params": {
                      "spdx": "GPL-2.0"
                    }
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributing_guide",
                "name": "CONTRIBUTING guide",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 18
              },
              {
                "key": "code_of_conduct",
                "name": "Code of conduct",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 13.5
              },
              {
                "key": "issue_template",
                "name": "Issue template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.2
              },
              {
                "key": "pr_template",
                "name": "PR template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.3
              }
            ]
          }
        ],
        "description": "Does the project have users, downloads, attention, and a welcoming setup for contributors?"
      },
      {
        "key": "governance",
        "band": "moderate",
        "name": "Sustainability & Governance",
        "value": 63,
        "weight": 0.24,
        "metrics": [
          {
            "key": "maintainer_resilience",
            "band": "critical",
            "name": "Maintainer resilience (bus factor)",
            "note": null,
            "notes": [],
            "value": 22,
            "inputs": {
              "bus_factor": 1,
              "contributors_sampled": 5,
              "top_contributor_share": 0.986
            },
            "components": [
              {
                "key": "bus_factor",
                "name": "Bus factor",
                "detail": "1 contributor(s) cover half of all commits",
                "points": 9,
                "status": "partial",
                "details": [
                  {
                    "code": "bus_factor",
                    "params": {
                      "count": 1
                    }
                  }
                ],
                "max_points": 54
              },
              {
                "key": "commit_distribution",
                "name": "Commit distribution",
                "detail": "top contributor authored 99% of commits",
                "points": 0.3,
                "status": "partial",
                "details": [
                  {
                    "code": "top_contributor_share",
                    "params": {
                      "share": 99
                    }
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributor_breadth",
                "name": "Contributor breadth",
                "detail": "5 contributors",
                "points": 6.8,
                "status": "partial",
                "details": [
                  {
                    "code": "contributors_sampled",
                    "params": {
                      "count": 5
                    }
                  }
                ],
                "max_points": 13.5
              },
              {
                "key": "openssf_scorecard_contributors",
                "name": "OpenSSF Scorecard: Contributors",
                "detail": "project has 2 contributing companies or organizations -- score normalized to 6",
                "points": 6,
                "status": "partial",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "responsiveness",
            "band": "good",
            "name": "Issue & PR responsiveness",
            "note": null,
            "notes": [],
            "value": 80,
            "inputs": {
              "merged_prs": 9,
              "open_issues": 2,
              "closed_issues": 19,
              "issue_closed_ratio": 0.905,
              "closed_unmerged_prs": 0
            },
            "components": [
              {
                "key": "issue_resolution",
                "name": "Issue resolution",
                "detail": "90% of issues closed",
                "points": 42.3,
                "status": "partial",
                "details": [
                  {
                    "code": "issues_closed_share",
                    "params": {
                      "share": 90
                    }
                  }
                ],
                "max_points": 46.75
              },
              {
                "key": "pr_acceptance",
                "name": "PR acceptance",
                "detail": "9/9 decided PRs merged",
                "points": 38.2,
                "status": "met",
                "details": [
                  {
                    "code": "decided_prs_merged",
                    "params": {
                      "merged": 9,
                      "decided": 9
                    }
                  }
                ],
                "max_points": 38.25
              },
              {
                "key": "openssf_scorecard_code_review",
                "name": "OpenSSF Scorecard: Code-Review",
                "detail": "Found 1/19 approved changesets -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              }
            ]
          },
          {
            "key": "stewardship",
            "band": "moderate",
            "name": "Ownership & stewardship",
            "note": null,
            "notes": [],
            "value": 65,
            "inputs": {
              "followers": 50,
              "owner_type": "Organization",
              "is_verified": null,
              "owner_login": "evolbioinfo",
              "public_repos": 30,
              "account_age_days": 3437
            },
            "components": [
              {
                "key": "ownership_backing",
                "name": "Ownership backing",
                "detail": "organization-owned",
                "points": 30,
                "status": "met",
                "details": [
                  {
                    "code": "owner_organization",
                    "params": {}
                  }
                ],
                "max_points": 30
              },
              {
                "key": "verified_domain",
                "name": "Verified domain",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              },
              {
                "key": "owner_reach",
                "name": "Owner reach",
                "detail": "50 followers of evolbioinfo",
                "points": 12.3,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_followers",
                    "params": {
                      "count": 50,
                      "login": "evolbioinfo"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "track_record",
                "name": "Track record",
                "detail": "30 public repos, account ~9 yr old",
                "points": 22.9,
                "status": "partial",
                "details": [
                  {
                    "code": "public_repos",
                    "params": {
                      "count": 30
                    }
                  },
                  {
                    "code": "account_age_years",
                    "params": {
                      "years": 9
                    }
                  }
                ],
                "max_points": 25
              }
            ]
          },
          {
            "key": "package_maintenance",
            "band": "excellent",
            "name": "Package maintenance",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "packages": [
                "github.com/evolbioinfo/gotree"
              ],
              "ecosystems": "go",
              "any_deprecated": false,
              "min_days_since_publish": 22
            },
            "components": [
              {
                "key": "published_resolvable",
                "name": "Published & resolvable",
                "detail": "1 package(s) on go",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "packages_published",
                    "params": {
                      "count": 1,
                      "ecosystems": "go"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "publish_recency",
                "name": "Publish recency",
                "detail": "latest publish 22 days ago",
                "points": 35,
                "status": "met",
                "details": [
                  {
                    "code": "publish_recency",
                    "params": {
                      "days": 22
                    }
                  }
                ],
                "max_points": 35
              },
              {
                "key": "version_history",
                "name": "Version history",
                "detail": "40 published versions",
                "points": 20,
                "status": "met",
                "details": [
                  {
                    "code": "published_versions",
                    "params": {
                      "count": 40
                    }
                  }
                ],
                "max_points": 20
              },
              {
                "key": "not_deprecated",
                "name": "Not deprecated",
                "detail": "active, not deprecated or yanked",
                "points": 20,
                "status": "met",
                "details": [
                  {
                    "code": "package_not_deprecated",
                    "params": {}
                  }
                ],
                "max_points": 20
              }
            ]
          }
        ],
        "description": "Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?"
      },
      {
        "key": "engineering",
        "band": "good",
        "name": "Engineering Quality",
        "value": 81,
        "weight": 0.2,
        "metrics": [
          {
            "key": "engineering_practices",
            "band": "moderate",
            "name": "Engineering practices",
            "note": null,
            "notes": [],
            "value": 68,
            "inputs": {
              "has_ci": true,
              "has_tests": true,
              "has_editorconfig": false,
              "has_linter_config": false,
              "has_precommit_config": false
            },
            "components": [
              {
                "key": "ci_workflows",
                "name": "CI workflows",
                "detail": "1 workflow(s)",
                "points": 24,
                "status": "met",
                "details": [
                  {
                    "code": "ci_workflows",
                    "params": {
                      "count": 1
                    }
                  }
                ],
                "max_points": 24
              },
              {
                "key": "tests_present",
                "name": "Tests present",
                "detail": null,
                "points": 24,
                "status": "met",
                "details": [],
                "max_points": 24
              },
              {
                "key": "linter_config",
                "name": "Linter config",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 16
              },
              {
                "key": "pre_commit_hooks",
                "name": "Pre-commit hooks",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 9.6
              },
              {
                "key": "editorconfig",
                "name": ".editorconfig",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.4
              },
              {
                "key": "openssf_scorecard_ci_tests",
                "name": "OpenSSF Scorecard: CI-Tests",
                "detail": "3 out of 3 merged PRs checked by a CI test -- score normalized to 10",
                "points": 20,
                "status": "met",
                "details": [],
                "max_points": 20
              }
            ]
          },
          {
            "key": "documentation",
            "band": "excellent",
            "name": "Documentation",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "topics": [
                "phylogeny",
                "newick",
                "tree",
                "tree-structure",
                "itol",
                "gotree",
                "nexus"
              ],
              "has_wiki": true,
              "homepage": "https://research.pasteur.fr/en/software/goalign-gotree/",
              "has_readme": true,
              "has_docs_dir": true,
              "has_description": true
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 30,
                "status": "met",
                "details": [],
                "max_points": 30
              },
              {
                "key": "documentation_directory",
                "name": "Documentation directory",
                "detail": null,
                "points": 25,
                "status": "met",
                "details": [],
                "max_points": 25
              },
              {
                "key": "documentation_homepage_site",
                "name": "Documentation / homepage site",
                "detail": "https://research.pasteur.fr/en/software/goalign-gotree/",
                "points": 15,
                "status": "met",
                "details": [],
                "max_points": 15
              },
              {
                "key": "repository_description",
                "name": "Repository description",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "topics",
                "name": "Topics",
                "detail": "7 topics",
                "points": 10,
                "status": "met",
                "details": [
                  {
                    "code": "topics_count",
                    "params": {
                      "count": 7
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "wiki",
                "name": "Wiki",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          }
        ],
        "description": "Are baseline engineering and documentation practices in place?"
      },
      {
        "key": "security",
        "band": "at_risk",
        "name": "Security",
        "value": 37,
        "weight": 0.16,
        "metrics": [
          {
            "key": "security_posture",
            "band": "at_risk",
            "name": "Security posture",
            "note": "Excluded from scoring (no data or not applicable): Branch-Protection, Packaging. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "branch_protection",
                    "packaging"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 30,
            "inputs": {
              "source": "openssf_scorecard",
              "checks_evaluated": 16,
              "scorecard_version": "v5.5.0",
              "checks_inconclusive": 2,
              "scorecard_aggregate": 3
            },
            "components": [
              {
                "key": "binary_artifacts",
                "name": "Binary-Artifacts",
                "detail": "no binaries found in the repo",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "branch_protection",
                "name": "Branch-Protection",
                "detail": "internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "ci_tests",
                "name": "CI-Tests",
                "detail": "3 out of 3 merged PRs checked by a CI test -- score normalized to 10",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "cii_best_practices",
                "name": "CII-Best-Practices",
                "detail": "no effort to earn an OpenSSF best practices badge detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "code_review",
                "name": "Code-Review",
                "detail": "Found 1/19 approved changesets -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "contributors",
                "name": "Contributors",
                "detail": "project has 2 contributing companies or organizations -- score normalized to 6",
                "points": 1.5,
                "status": "partial",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "dangerous_workflow",
                "name": "Dangerous-Workflow",
                "detail": "no dangerous workflow patterns detected",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "dependency_update_tool",
                "name": "Dependency-Update-Tool",
                "detail": "no update tool detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "fuzzing",
                "name": "Fuzzing",
                "detail": "project is not fuzzed",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "license file detected",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "maintained",
                "name": "Maintained",
                "detail": "6 commit(s) and 1 issue activity found in the last 90 days -- score normalized to 5",
                "points": 3.8,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "packaging",
                "name": "Packaging",
                "detail": "packaging workflow not detected",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 5
              },
              {
                "key": "pinned_dependencies",
                "name": "Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "sast",
                "name": "SAST",
                "detail": "SAST tool is not run on all commits -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "security_policy",
                "name": "Security-Policy",
                "detail": "security policy file not detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "signed_releases",
                "name": "Signed-Releases",
                "detail": "Project has not signed or included provenance with any releases.",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "token_permissions",
                "name": "Token-Permissions",
                "detail": "detected GitHub workflow tokens with excessive permissions",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "vulnerabilities",
                "name": "Vulnerabilities",
                "detail": "12 existing vulnerabilities detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              }
            ]
          },
          {
            "key": "dependency_advisories",
            "band": "moderate",
            "name": "Dependency advisories",
            "note": "Excluded from scoring (no data or not applicable): Indirect dependencies free of known advisories. Remaining weights renormalized. Matched 39 resolved dependencies against OSV. This repository publishes no package the index resolves, so the repository dependency graph was assessed instead. That graph mixes development and test pins with shipped dependencies, so only the declared runtime dependencies are scored; transitive findings are reported as context and excluded from the score. Reachability is not analyzed.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "indirect_dependencies_free_of_known_advisories"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              },
              {
                "code": "advisories_scope_repository",
                "params": {
                  "assessed": 39
                }
              },
              {
                "code": "advisories_repo_graph_caveat",
                "params": {}
              },
              {
                "code": "advisories_reachability",
                "params": {}
              }
            ],
            "value": 64,
            "inputs": {
              "source": "osv",
              "advisories": 16,
              "affected_packages": 4,
              "assessed_packages": 39,
              "unassessed_packages": 0,
              "affected_by_severity": "high 1, moderate 1, unknown 2",
              "direct_affected_packages": 1
            },
            "components": [
              {
                "key": "direct_dependencies_free_of_known_advisories",
                "name": "Direct dependencies free of known advisories",
                "detail": "1 affected: golang.org/x/image v0.11.0 (high 7.5)",
                "points": 14,
                "status": "partial",
                "details": [
                  {
                    "code": "advisories_affected",
                    "params": {
                      "count": 1,
                      "packages": "golang.org/x/image v0.11.0 (high 7.5)"
                    }
                  }
                ],
                "max_points": 35
              },
              {
                "key": "indirect_dependencies_free_of_known_advisories",
                "name": "Indirect dependencies free of known advisories",
                "detail": "transitive set not separable from development and test dependencies in this scope",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "advisories_scope_not_separable",
                    "params": {}
                  }
                ],
                "max_points": 25
              },
              {
                "key": "no_advisories_left_outstanding",
                "name": "No advisories left outstanding",
                "detail": "1 advisory-carrying package(s) unaddressed past 90 days; oldest published 756 days ago",
                "points": 33.7,
                "status": "partial",
                "details": [
                  {
                    "code": "advisories_stale",
                    "params": {
                      "days": 90,
                      "count": 1,
                      "oldest": 756
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "malicious_dependencies",
            "band": "excellent",
            "name": "Malicious dependencies",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "source": "osv",
              "meaning": "reported as a malicious package by the OpenSSF corpus; the remedy is removal or moving off the compromised name, never an upgrade of the same artifact. Versions the registry has since pulled are listed but not scored",
              "packages": [],
              "red_flag": false,
              "assessed_packages": 39,
              "malicious_packages": 0,
              "direct_malicious_packages": 0,
              "withdrawn_malicious_packages": 0,
              "installable_malicious_packages": 0
            },
            "components": [
              {
                "key": "no_dependency_reported_as_a_malicious_package",
                "name": "No dependency reported as a malicious package",
                "detail": "no dependency is reported as a malicious package",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "no_malicious_dependencies",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          },
          {
            "key": "high_risk_jurisdiction_exposure",
            "band": "excellent",
            "name": "High-Risk Jurisdiction Exposure",
            "note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
            "notes": [
              {
                "code": "jurisdiction_evidence_limits",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "meaning": "self-published location evidence; not nationality or citizenship",
              "red_flag": false,
              "exposures": [],
              "policy_countries": [
                "Russia",
                "Iran",
                "North Korea"
              ],
              "review_only_matches": 0,
              "assessed_self_published_locations": 17
            },
            "components": [
              {
                "key": "policy_exposure_multiplier",
                "name": "Policy exposure multiplier",
                "detail": "no confirmed policy-scope location match",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "jurisdiction_no_match",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
      },
      {
        "key": "ai_readiness",
        "band": "at_risk",
        "name": "AI Readiness",
        "value": 48,
        "weight": 0,
        "metrics": [
          {
            "key": "ai_agent_context",
            "band": "critical",
            "name": "Agent context & guidance",
            "note": null,
            "notes": [],
            "value": 6,
            "inputs": {
              "has_llms_txt": false,
              "legible_history_share": 0.105,
              "agent_instruction_files": [],
              "agent_instruction_max_bytes": null
            },
            "components": [
              {
                "key": "agent_instructions",
                "name": "Agent instructions",
                "detail": "no CLAUDE.md / AGENTS.md / editor rules",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_instructions",
                    "params": {}
                  }
                ],
                "max_points": 45
              },
              {
                "key": "machine_readable_docs_llms_txt",
                "name": "Machine-readable docs (llms.txt)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              },
              {
                "key": "legible_commit_history",
                "name": "Legible commit history",
                "detail": "10 of 95 human commits state their intent (structured subject or explanatory body)",
                "points": 5.6,
                "status": "partial",
                "details": [
                  {
                    "code": "legible_history",
                    "params": {
                      "legible": 10,
                      "sampled": 95
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "ai_verify_loop",
            "band": "moderate",
            "name": "Verify loop (build / test / typecheck)",
            "note": null,
            "notes": [],
            "value": 61,
            "inputs": {
              "has_nix": false,
              "has_tests": true,
              "lockfiles": [
                "go.sum"
              ],
              "has_dockerfile": false,
              "typed_language": true,
              "bootstrap_files": [
                "Makefile"
              ],
              "has_devcontainer": false,
              "has_linter_config": false,
              "typecheck_configs": [],
              "agent_commit_share": 0,
              "toolchain_manifests": [
                "go.mod"
              ],
              "dependency_bot_commit_share": 0
            },
            "components": [
              {
                "key": "one_command_bootstrap",
                "name": "One-command bootstrap",
                "detail": "Makefile",
                "points": 18,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "Makefile"
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "automated_tests",
                "name": "Automated tests",
                "detail": null,
                "points": 22,
                "status": "met",
                "details": [],
                "max_points": 22
              },
              {
                "key": "lint_format_config",
                "name": "Lint / format config",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "static_type_checking",
                "name": "Static type checking",
                "detail": "Go (statically typed)",
                "points": 11,
                "status": "met",
                "details": [
                  {
                    "code": "statically_typed_language",
                    "params": {
                      "language": "Go"
                    }
                  }
                ],
                "max_points": 11
              },
              {
                "key": "reproducible_environment",
                "name": "Reproducible environment",
                "detail": "lockfile",
                "points": 10,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "lockfile"
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "demonstrated_agent_practice",
                "name": "Demonstrated agent practice",
                "detail": "no agent-authored commits among the last 100",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_authored_commits",
                    "params": {
                      "sampled": 100
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "automated_maintenance",
                "name": "Automated maintenance",
                "detail": "no automated dependency updates observed",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_dependency_automation",
                    "params": {}
                  }
                ],
                "max_points": 8
              },
              {
                "key": "openssf_scorecard_pinned_dependencies",
                "name": "OpenSSF Scorecard: Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "ai_code_legibility",
            "band": "excellent",
            "name": "Code legibility for models",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "primary_language": "Go",
              "largest_source_bytes": 61630,
              "source_files_sampled": 180,
              "oversized_source_files": 1
            },
            "components": [
              {
                "key": "type_checkable_code",
                "name": "Type-checkable code",
                "detail": "Go (statically typed)",
                "points": 45,
                "status": "met",
                "details": [
                  {
                    "code": "statically_typed_language",
                    "params": {
                      "language": "Go"
                    }
                  }
                ],
                "max_points": 45
              },
              {
                "key": "manageable_file_sizes",
                "name": "Manageable file sizes",
                "detail": "1/180 source files over 60KB",
                "points": 54.7,
                "status": "partial",
                "details": [
                  {
                    "code": "oversized_source_files",
                    "params": {
                      "kb": 60,
                      "sampled": 180,
                      "oversized": 1
                    }
                  }
                ],
                "max_points": 55
              }
            ]
          }
        ],
        "description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
      }
    ],
    "metrics_version": "1.13.0"
  },
  "warnings": [
    "Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token"
  ],
  "report_type": "repository",
  "generated_at": "2026-07-22T15:26:54.842317Z",
  "schema_version": "0.26.0",
  "badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/e/evolbioinfo/gotree.svg",
  "full_name": "evolbioinfo/gotree",
  "license_state": "standard",
  "license_spdx": "GPL-2.0"
}

Оцінки — це сигнали, а не гарантії. Вони відображають публічно видимі практики на GitHub — це не аудит коду й не гарантія безпеки.

Відсутні дані виключаються, а ваги перенормовуються — нуль за відсутність ніколи не ставиться. Методологія версіонована й відкрита: метрики v1.13.0, схема v0.26.0 — повна методологія · вікі метрик.

Як окремий результат виглядає на тлі всього реєстру: сукупна статистикаGo.