公开记录中等
软件健康报告模式 0.27.0 · 指标 1.13.0 · 2026-07-26 00:05 UTC
BuildACell / bioCRNpyler
A modular compiler for biological chemical reaction networks
BuildACell/bioCRNpyler 的健康指数为 100 分中的 68 分，处于「中等」区间。 其得分最高的类别是Vitality（80/100），最低的是AI Readiness（32/100）。 最近一次更新在 6 天前。 近期的大部分工作由 3 位贡献者完成。
68
总分 / 100软件健康指数
指标归入加权类别，统一采用 1–100 量表。总体分先取类别加权平均；当公开证据触发高风险司法辖区政策时，评级会按政策调整，并设置 49（有风险）的上限。AI 就绪度不计入总体分。
68
优秀85-100堪称典范；基本满足所有检验标准
良好70-84健康；仅有轻微不足
中等50-69可接受，但存在明显不足；建议进行审查
存在风险30-49存在重大薄弱环节；采用时应保持审慎
危急1-29问题严重（项目被弃置、仅有单一维护者、缺乏基本工程规范）
评分画像
每条轴代表一个类别。形状比平均值更重要——健康的对象会填满整个图形，而“一峰一谷”式画像意味着某一维度的优势正掩盖另一维度的风险。
所有权
软件包生态系统
| 注册表 | 软件包 | 版本 | 月下载量 | 版本数 | 最近发布 | 标签 |
|---|---|---|---|---|---|---|
| PyPI | BioCRNpyler | 1.3.3 | - | 14 | 6 天前 | sbmlsynthetic-biologymodelingchemical-reaction-networkcrn |
按类别列示的指标
活力
项目是否仍有生命——是否仍在编写代码，是否仍在发布版本？
80
开发活跃度
78良好
评分方式
| 36/36 | 推送新近度 — 最近一次推送于 6 天前 |
| 14.5/36 | 提交节奏 — 52 周中有 21 周有提交 |
| 18/18 | 提交量 — 最近一年 116 次提交 |
| 10/10 | OpenSSF Scorecard：Maintained — 5 commit(s) and 10 issue activity found in the last 90 days -- score normalized to 10 |
所用输入
| commits_last_year | 116 |
| human_commit_share | 1 |
| days_since_last_push | 6 |
| active_weeks_last_year | 21 |
发布纪律
84良好
评分方式
| 27/27 | 有发布版本 — 已发布 8 个发布版本 |
| 36/36 | 发布时效 — 最近一次发布版本于 6 天前 |
| 12.6/27 | 发布节奏 — 约每 311 天发布一次 |
| 0/10 | OpenSSF Scorecard：Signed-Releases — 无数据 |
所用输入
| releases_count | 8 |
| latest_release_tag | v1.3.3 |
| releases_from_tags | 否 |
| days_since_latest_release | 6 |
| mean_days_between_releases | 311 |
已排除计分（无数据或不适用）：OpenSSF Scorecard：Signed-Releases。 其余权重已重新归一化。
社区与采用
项目是否拥有用户、下载量与关注度，并具备欢迎贡献者参与的配置？
47
流行度与采用
45存在风险
评分方式
| 28/60 | 星标 — 54 个星标 |
| 11.7/25 | 复刻 — 26 个复刻 |
| 5.3/15 | 关注者 — 10 位关注者 |
所用输入
| forks | 26 |
| stars | 54 |
| watchers | 10 |
| growth_state | unverified |
| growth_factor_pct | 100 |
| growth_unverified_reason | no_history |
社区健康
50中等
评分方式
| 22.5/22.5 | README |
| 22.5/22.5 | 许可证 — 可识别的许可证（BSD-3-Clause） |
| 0/18 | CONTRIBUTING 指南 |
| 0/13.5 | 行为准则 |
| 0/7.2 | 议题模板 |
| 0/6.3 | PR 模板 |
所用输入
| has_readme | 是 |
| has_license | 是 |
| has_contributing | 否 |
| has_issue_template | 否 |
| has_code_of_conduct | 否 |
| has_pull_request_template | 否 |
可持续性与治理
项目能否在其成员之外延续——巴士系数、响应能力、由谁支持，以及软件包的维护状况？
74
维护者韧性（巴士系数）
75良好
评分方式
| 36/54 | 巴士系数 — 3 位贡献者贡献了半数提交 |
| 16.4/22.5 | 提交分布 — 头号贡献者编写了 27% 的提交 |
| 12.2/13.5 | 贡献者广度 — 9 位贡献者 |
| 10/10 | OpenSSF Scorecard：Contributors — project has 5 contributing companies or organizations |
所用输入
| bus_factor | 3 |
| contributors_sampled | 9 |
| top_contributor_share | 0.27 |
议题与 PR 响应能力
68中等
评分方式
| 36.6/46.8 | 议题解决 — 78% 的议题已关闭 |
| 31.2/38.3 | PR 接受 — 已裁定的 PR 中 120/147 已合并 |
| 0/15 | OpenSSF Scorecard：Code-Review — Found 0/2 approved changesets -- score normalized to 0 |
所用输入
| merged_prs | 120 |
| open_issues | 40 |
| closed_issues | 144 |
| issue_closed_ratio | 0.783 |
| closed_unmerged_prs | 27 |
所有权与托管责任
60中等
评分方式
| 30/30 | 所有权背书 — 组织持有 |
| 0/20 | 已验证域名 |
| 10.4/25 | 所有者影响力 — BuildACell 有 27 位关注者 |
| 20.1/25 | 既往记录 — 12 个公开仓库，账户约 9 年 |
所用输入
| followers | 27 |
| owner_type | Organization |
| is_verified | — |
| owner_login | BuildACell |
| public_repos | 12 |
| account_age_days | 3,557 |
软件包维护
100优秀
评分方式
| 25/25 | 已发布且可解析 — pypi 上有 1 个软件包 |
| 35/35 | 发布时效 — 最近一次发布于 6 天前 |
| 20/20 | 版本历史 — 14 个已发布版本 |
| 20/20 | 未被弃用 — 活跃，未被弃用或撤回 |
所用输入
| packages | BioCRNpyler |
| ecosystems | pypi |
| any_deprecated | 否 |
| min_days_since_publish | 6 |
工程质量
基础的工程与文档实践是否到位？
71
工程实践
68中等
评分方式
| 24/24 | CI 工作流 — 3 个工作流 |
| 24/24 | 存在测试 |
| 0/16 | Linter 配置 |
| 0/9.6 | Pre-commit 钩子 |
| 0/6.4 | .editorconfig |
| 20/20 | OpenSSF Scorecard：CI-Tests — 2 out of 2 merged PRs checked by a CI test -- score normalized to 10 |
所用输入
| has_ci | 是 |
| has_tests | 是 |
| has_editorconfig | 否 |
| has_linter_config | 否 |
| has_precommit_config | 否 |
文档
75良好
评分方式
| 30/30 | README |
| 25/25 | 文档目录 |
| 0/15 | 文档 / 主页站点 |
| 10/10 | 仓库描述 |
| 0/10 | 主题标签 |
| 10/10 | Wiki |
所用输入
| topics | — |
| has_wiki | 是 |
| homepage | — |
| has_readme | 是 |
| has_docs_dir | 是 |
| has_description | 是 |
安全
可见的安全与供应链实践是否稳固，且不存在未解决的高风险司法辖区暴露？
60
安全态势
50中等
评分方式
| 7.5/7.5 | Binary-Artifacts — no binaries found in the repo |
| 0/7.5 | Branch-Protection — 无数据 |
| 2.5/2.5 | CI-Tests — 2 out of 2 merged PRs checked by a CI test -- score normalized to 10 |
| 0/2.5 | CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected |
| 0/7.5 | Code-Review — Found 0/2 approved changesets -- score normalized to 0 |
| 2.5/2.5 | Contributors — project has 5 contributing companies or organizations |
| 10/10 | Dangerous-Workflow — no dangerous workflow patterns detected |
| 0/7.5 | Dependency-Update-Tool — no update tool detected |
| 0/5 | Fuzzing — project is not fuzzed |
| 2.5/2.5 | 许可证 — license file detected |
| 7.5/7.5 | Maintained — 5 commit(s) and 10 issue activity found in the last 90 days -- score normalized to 10 |
| 5/5 | Packaging — packaging workflow detected |
| 0/5 | Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
| 0/5 | SAST — SAST tool is not run on all commits -- score normalized to 0 |
| 0/5 | Security-Policy — security policy file not detected |
| 0/7.5 | Signed-Releases — 无数据 |
| 0/7.5 | Token-Permissions — detected GitHub workflow tokens with excessive permissions |
| 7.5/7.5 | Vulnerabilities — 0 existing vulnerabilities detected |
所用输入
| source | openssf_scorecard |
| checks_evaluated | 16 |
| scorecard_version | v5.5.0 |
| checks_inconclusive | 2 |
| scorecard_aggregate | 5 |
已排除计分（无数据或不适用）：branch_protection, signed_releases。 其余权重已重新归一化。
依赖安全公告
100优秀
评分方式
| 35/35 | 直接依赖不含已知公告 — 没有直接依赖携带已知公告 |
| 25/25 | 间接依赖不含已知公告 — 没有间接依赖携带已知公告 |
| 0/40 | 没有长期未处理的公告 — 没有公告带有发布日期 |
所用输入
| source | osv |
| advisories | 0 |
| affected_packages | 0 |
| assessed_packages | 109 |
| unassessed_packages | 0 |
| affected_by_severity | none |
| direct_affected_packages | 0 |
已排除计分（无数据或不适用）：没有长期未处理的公告。 其余权重已重新归一化。 比对的是 pypi:BioCRNpyler@1.3.3 的运行时依赖闭包——安装已发布的软件包时真正被拉取进来的内容——共 109 个软件包。 未对可达性进行分析。
AI 就绪度
该仓库在多大程度上具备与 AI 编码代理协同开发与维护的条件？这是一枚独立的实验性徽章——权重为 0.0，因此单独呈现，不影响总体健康评分。
32
AI 代理上下文与指引
8危急
评分方式
| 0/45 | 代理指令 — 没有 CLAUDE.md / AGENTS.md / 编辑器规则 |
| 0/15 | 机器可读文档（llms.txt） |
| 8/40 | 可读的提交历史 — 100 次人类提交中有 15 次说明了意图（结构化标题或解释性正文） |
所用输入
| has_llms_txt | 否 |
| legible_history_share | 0.15 |
| agent_instruction_files | — |
| agent_instruction_max_bytes | — |
验证循环（构建 / 测试 / 类型检查）
40存在风险
评分方式
| 18/18 | 一条命令的引导启动 — Makefile, docs/Makefile |
| 22/22 | 自动化测试 |
| 0/11 | Lint / 格式化配置 |
| 0/11 | 静态类型检查 |
| 0/10 | 可复现环境 |
| 0/10 | 已体现的代理实践 — 最近 100 次提交中没有代理编写的提交 |
| 0/8 | 自动化维护 — 未观察到自动依赖更新 |
| 0/10 | OpenSSF Scorecard：Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
所用输入
| has_nix | 否 |
| has_tests | 是 |
| lockfiles | — |
| has_dockerfile | 否 |
| typed_language | 否 |
| bootstrap_files | Makefile, docs/Makefile |
| has_devcontainer | 否 |
| has_linter_config | 否 |
| typecheck_configs | — |
| agent_commit_share | 0 |
| toolchain_manifests | — |
| dependency_bot_commit_share | 0 |
面向模型的代码可读性
53中等
评分方式
| 0/45 | 可类型检查的代码 — Python，未配置类型检查 |
| 53.4/55 | 可控的文件大小 — 采样的 104 个源文件中有 3 个超过 60KB |
所用输入
| primary_language | Python |
| largest_source_bytes | 93,584 |
| source_files_sampled | 104 |
| oversized_source_files | 3 |
机器可读接口
40存在风险
评分方式
| 0/40 | API 模式（OpenAPI/GraphQL/proto） |
| 0/20 | MCP 服务器 |
| 40/40 | 可运行示例 — examples, notebooks |
所用输入
| example_dirs | examples, notebooks |
| has_mcp_signal | 否 |
| api_schema_files | — |
关键数据
54GitHub 星标
9贡献者
116最近 12 个月提交数
6距最近推送天数
8发布版本数
3巴士系数（bus factor）
40开放议题
PyPI软件包生态系统数
数据采集警告
- Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token
更多细节
Star 与 Fork 历史 0 ★ / 26 ⇿
0Star
26Fork
8发布
每颗 star 和每个 fork 的添加时间，来自 GitHub 并按天汇总。累计增长位于其构成来源——每日新增——的正上方，二者可相互对照：稳定的自然增长与短暂的突增形态截然不同。当这一差别可被衡量时，它会作为增长真实性予以报告。
主版本 1次版本 3修订 4
每个点涵盖 8 天。
OpenSSF Scorecard 5.0 / 10
5.0综合
来自开源项目 OpenSSF Scorecard 的独立、工具无关的安全评估。每项检查奖励的是安全实践本身，而非特定供应商的工具。Scorecard 无法判定的检查项标记为 不适用，并从安全评分中剔除（绝不按零分计）。
| 10 | Binary-Artifacts | no binaries found in the repo |
| 不适用 | Branch-Protection | internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md |
| 10 | CI-Tests | 2 out of 2 merged PRs checked by a CI test -- score normalized to 10 |
| 0 | CII-Best-Practices | no effort to earn an OpenSSF best practices badge detected |
| 0 | Code-Review | Found 0/2 approved changesets -- score normalized to 0 |
| 10 | Contributors | project has 5 contributing companies or organizations |
| 10 | Dangerous-Workflow | no dangerous workflow patterns detected |
| 0 | Dependency-Update-Tool | no update tool detected |
| 0 | Fuzzing | project is not fuzzed |
| 10 | License | license file detected |
| 10 | Maintained | 5 commit(s) and 10 issue activity found in the last 90 days -- score normalized to 10 |
| 10 | Packaging | packaging workflow detected |
| 0 | Pinned-Dependencies | dependency not pinned by hash detected -- score normalized to 0 |
| 0 | SAST | SAST tool is not run on all commits -- score normalized to 0 |
| 0 | Security-Policy | security policy file not detected |
| 不适用 | Signed-Releases | no releases found |
| 0 | Token-Permissions | detected GitHub workflow tokens with excessive permissions |
| 10 | Vulnerabilities | 0 existing vulnerabilities detected |
直接依赖 10
| 注册表 | 软件包 | 版本约束 | 清单文件 |
|---|---|---|---|
| PyPI | python-libsbml | — | pyproject.toml |
| PyPI | numpy | <2.0 | pyproject.toml |
| PyPI | matplotlib | — | pyproject.toml |
| PyPI | networkx | — | pyproject.toml |
| PyPI | bokeh | >=1.4.0 | pyproject.toml |
| PyPI | fa2_modified | — | pyproject.toml |
| PyPI | jupyter | — | pyproject.toml |
| PyPI | pytest | — | pyproject.toml |
| PyPI | pytest-cov | — | pyproject.toml |
| PyPI | nbconvert | — | pyproject.toml |
全部依赖 21
来自 GitHub 依赖图的完整解析依赖集合：10 个直接依赖与 11 个间接（传递）软件包。仓库提交锁文件时，传递闭包才是完整的。
| 注册表 | 软件包 | 版本 | 关系 |
|---|---|---|---|
| PyPI | bokeh | — | 直接 |
| PyPI | fa2-modified | — | 直接 |
| PyPI | jupyter | — | 直接 |
| PyPI | matplotlib | — | 直接 |
| PyPI | nbconvert | — | 直接 |
| PyPI | networkx | — | 直接 |
| PyPI | numpy | — | 直接 |
| PyPI | pytest | — | 直接 |
| PyPI | pytest-cov | — | 直接 |
| PyPI | python-libsbml | — | 直接 |
| PyPI | nbsphinx | — | 间接 |
| PyPI | nbsphinx-link | — | 间接 |
| PyPI | numpydoc | — | 间接 |
| PyPI | pandoc | — | 间接 |
| PyPI | recommonmark | — | 间接 |
| PyPI | setuptools-scm | — | 间接 |
| PyPI | sphinx | — | 间接 |
| PyPI | sphinx-copybutton | — | 间接 |
| PyPI | sphinx-math-dollar | — | 间接 |
| PyPI | sphinx-rtd-theme | — | 间接 |
| PyPI | sphinx-toggleprompt | — | 间接 |
依赖安全公告 0
安装 pypi:BioCRNpyler@1.3.3 会引入 109 个包（直接与传递）：其中 0 个存在已知公告，0 个为直接依赖。
没有已知公告影响已评估的依赖。
公告表示依赖图中记录的版本落入某条公告的受影响范围。可达性未经分析，且依赖图包含开发与测试的版本固定——某项发现可能只涉及工具链而非交付的软件。
原始 JSON 报告 机器可读
{
"data": {
"repo": {
"topics": [],
"is_fork": false,
"size_kb": 38988,
"has_wiki": true,
"homepage": null,
"languages": {
"Python": 1620267,
"Makefile": 1153
},
"pushed_at": "2026-07-19T01:04:06Z",
"created_at": "2018-10-09T00:06:57Z",
"owner_type": "Organization",
"updated_at": "2026-07-20T18:48:59Z",
"description": "A modular compiler for biological chemical reaction networks",
"is_archived": false,
"is_disabled": false,
"license_spdx": "BSD-3-Clause",
"default_branch": "main",
"license_spdx_raw": "BSD-3-Clause",
"primary_language": "Python",
"significant_languages": [
"Python"
]
},
"owner": {
"blog": "http://buildacell.io",
"name": "Build-A-Cell",
"type": "Organization",
"login": "BuildACell",
"company": null,
"location": "Distributed like biology.",
"followers": 27,
"avatar_url": "https://avatars.githubusercontent.com/u/23123180?v=4",
"created_at": "2016-10-28T14:43:33Z",
"is_verified": null,
"public_repos": 12,
"account_age_days": 3557
},
"license": {
"state": "standard",
"spdx_id": "BSD-3-Clause",
"raw_spdx": "BSD-3-Clause",
"file_present": true,
"scorecard_found": true,
"profile_has_license": true
},
"activity": {
"releases": [
{
"tag": "v1.3.3",
"kind": "patch",
"published_at": "2026-07-19T01:04:06Z"
},
{
"tag": "v1.3.2",
"kind": "patch",
"published_at": "2025-09-15T02:41:27Z"
},
{
"tag": "1.3.1",
"kind": "patch",
"published_at": "2025-08-13T01:26:03Z"
},
{
"tag": "1.3.0",
"kind": "minor",
"published_at": "2025-08-12T03:21:29Z"
},
{
"tag": "1.1.2",
"kind": "patch",
"published_at": "2024-06-20T10:43:40Z"
},
{
"tag": "1.1.0",
"kind": "minor",
"published_at": "2021-06-21T17:43:47Z"
},
{
"tag": "1.0.0",
"kind": "major",
"published_at": "2020-08-03T19:47:51Z"
},
{
"tag": "0.9.0",
"kind": "minor",
"published_at": "2020-08-02T06:29:33Z"
}
],
"recent_commits": [
{
"oid": "d89e601397ad60588e45cf9a2e0214a54bbcf20c",
"body": "updated parameter processing",
"is_bot": false,
"headline": "Merge pull request #320 from murrayrm/parameter_update-22Nov2025",
"author_name": "Richard Murray",
"author_login": "murrayrm",
"committed_at": "2026-05-10T13:51:30Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "2f14b630defaad5eaa5cd618500ee9eca00eb854",
"body": null,
"is_bot": false,
"headline": "ruff format",
"author_name": "Richard Murray",
"author_login": "murrayrm",
"committed_at": "2026-05-10T13:17:37Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "2d9fee8737ed61002ef9f82604aad37f3b637682",
"body": null,
"is_bot": false,
"headline": "typo in workflow and add aliases for nL, mL so tests pass",
"author_name": "ayush9pandey",
"author_login": "ayush9pandey",
"committed_at": "2026-05-10T12:33:11Z",
"body_truncated": false,
"is_coding_agent": false
},
{
"oid": "22e2ce9d8b2d9fb481b525ae0ce1cc20e1f09b26",
"body": null,
"is_bot": false,
"headline": "remove unnecessary test in unit params",
"author_name": "ayush9pandey",
"author_login": "ayush9pandey",
"committed_at": "2026-05-10T12:31:49Z",
"body_truncated": false,
"is_coding_agent": false
},
{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
"key": "vulnerabilities",
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{
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