#protein

A high-performance, pure Rust toolkit for standardizing and preparing biomolecular systems (proteins & nucleic acids). It heals missing atoms, resolves protonation states, adds solvation, and unifies topologies to forge simulation-ready structures.

Python module for drawing and rendering beautiful atoms and molecules using Blender.

Python library and a CLI tool to analyze protein sample files

React component for visualizing protein structures with the Mol* framework.

Protein folding in Pymol

Macromolecular viewer for crystallographers (WebGL)

FastMCP-based protein data access tools for bioinformatics research

Protein structure comparison tools such as SSAP and SNAP

Cython implementation of PDB -> DataFrame parsing

A high-performance, pure Rust library for full-atom protein side-chain packing using the DREIDING force field, Goldstein+Split DEE, and tree-decomposition DP—with native protein–ligand and protein–nucleic acid interface support.

Library to visualize protein sequence features in javascript using D3 - From SIB CALIPHO group; neXtProt project