公开记录
软件健康报告模式 0.11.0 · 指标 1.13.0 · 2026-07-15 14:46 UTC

bradyajohnston / molecularnodes

Toolbox for molecular animations in Blender, powered by Geometry Nodes.

PythonGPL-3.0★ 1,317 星标⑂ 124 复刻始于 2022年4月在 GitHub 上查看 ↗

bradyajohnston/molecularnodes 的健康指数为 100 分中的 72 分,处于「良好」区间。 其得分最高的类别是Engineering Quality(87/100),最低的是AI Readiness(35/100)。 最近一次更新在 6 天前。 近期的大部分工作由 1 位贡献者完成。

72
总分 / 100
良好

软件健康指数

指标归入加权类别,统一采用 1–100 量表。总体分先取类别加权平均;当公开证据触发高风险司法辖区政策时,评级会按政策调整,并设置 49(有风险)的上限。AI 就绪度不计入总体分。

72
优秀85-100堪称典范;基本满足所有检验标准
良好70-84健康;仅有轻微不足
中等50-69可接受,但存在明显不足;建议进行审查
存在风险30-49存在重大薄弱环节;采用时应保持审慎
危急1-29问题严重(项目被弃置、仅有单一维护者、缺乏基本工程规范)
活力社区与采用可持续性与治理工程质量安全AI 就绪度

评分画像

每条轴代表一个类别。形状比平均值更重要——健康的对象会填满整个图形,而“一峰一谷”式画像意味着某一维度的优势正掩盖另一维度的风险。

所有权

Brady Johnston个人账户
462 关注者124 个公开仓库始于 2018年2月Freelance scientific animator & developer.

该仓库由个人账户拥有。相较于组织支持的项目,单一所有者项目的延续性风险更高。

软件包生态系统

注册表软件包版本月下载量版本数最近发布
PyPImolecularnodes4.5.12-27119 天前

按类别列示的指标

活力

项目是否仍有生命——是否仍在编写代码,是否仍在发布版本?

82良好 · 占总体的 22%
评分方式
36/36推送新近度 — 最近一次推送于 6 天前
21.5/36提交节奏 — 52 周中有 31 周有提交
18/18提交量 — 最近一年 134 次提交
7/10OpenSSF Scorecard:Maintained — 0 commit(s) and 9 issue activity found in the last 90 days -- score normalized to 7
所用输入
commits_last_year134
human_commit_share
days_since_last_push6
active_weeks_last_year31

发布纪律

81良好
评分方式
27/27有发布版本 — 已发布 92 个发布版本
27/36发布时效 — 最近一次发布版本于 119 天前
27/27发布节奏 — 约每 20.5 天发布一次
0/10OpenSSF Scorecard:Signed-Releases — Project has not signed or included provenance with any releases.
所用输入
releases_count92
latest_release_tagv4.5.12
releases_from_tags
days_since_latest_release119
mean_days_between_releases20.5

社区与采用

项目是否拥有用户、下载量与关注度,并具备欢迎贡献者参与的配置?

73良好 · 占总体的 18%
评分方式
50.6/60星标 — 1,317 个星标
17.4/25复刻 — 124 个复刻
7.1/15关注者 — 20 位关注者
所用输入
forks124
stars1,317
watchers20
growth_stateunverified
growth_factor_pct100
growth_unverified_reasonno_history

社区健康

70良好
评分方式
22.5/22.5README
22.5/22.5许可证 — 可识别的许可证(GPL-3.0)
18/18CONTRIBUTING 指南
0/13.5行为准则
0/7.2议题模板
0/6.3PR 模板
所用输入
has_readme
has_license
has_contributing
has_issue_template
has_code_of_conduct
has_pull_request_template

可持续性与治理

项目能否在其成员之外延续——巴士系数、响应能力、由谁支持,以及软件包的维护状况?

69中等 · 占总体的 24%
评分方式
9/54巴士系数 — 1 位贡献者贡献了半数提交
3.4/22.5提交分布 — 头号贡献者编写了 85% 的提交
13.5/13.5贡献者广度 — 33 位贡献者
10/10OpenSSF Scorecard:Contributors — project has 15 contributing companies or organizations
所用输入
bus_factor1
contributors_sampled33
top_contributor_share0.847
评分方式
39/46.8议题解决 — 83% 的议题已关闭
35.2/38.3PR 接受 — 已裁定的 PR 中 503/546 已合并
9/15OpenSSF Scorecard:Code-Review — Found 20/30 approved changesets -- score normalized to 6
所用输入
merged_prs503
open_issues85
closed_issues426
issue_closed_ratio0.834
closed_unmerged_prs43
评分方式
10/30所有权背书 — 个人(用户)账户
0/20已验证域名 — 不适用于个人账户
19.2/25所有者影响力 — BradyAJohnston 有 462 位关注者
25/25既往记录 — 124 个公开仓库,账户约 8 年
所用输入
followers462
owner_typeUser
is_verified
owner_loginBradyAJohnston
public_repos124
account_age_days3,086
已排除计分(无数据或不适用):已验证域名。 其余权重已重新归一化。
评分方式
25/25已发布且可解析 — pypi 上有 1 个软件包
35/35发布时效 — 最近一次发布于 119 天前
20/20版本历史 — 27 个已发布版本
20/20未被弃用 — 活跃,未被弃用或撤回
所用输入
packagesmolecularnodes
ecosystemspypi
any_deprecated
min_days_since_publish119

工程质量

基础的工程与文档实践是否到位?

87优秀 · 占总体的 20%

工程实践

78良好
评分方式
24/24CI 工作流 — 5 个工作流
24/24存在测试
16/16Linter 配置
9.6/9.6Pre-commit 钩子
0/6.4.editorconfig
4/20OpenSSF Scorecard:CI-Tests — 6 out of 29 merged PRs checked by a CI test -- score normalized to 2
所用输入
has_ci
has_tests
has_editorconfig
has_linter_config
has_precommit_config

文档

100优秀
评分方式
30/30README
25/25文档目录
15/15文档 / 主页站点 — https://bradyajohnston.github.io/MolecularNodes/
10/10仓库描述
10/10主题标签 — 20 个主题标签
10/10Wiki
所用输入
topicsblender, biochemistry, protein, protein-structure, protein-visualization, sciart, visualisation, structural-biology, blender-addon, protein-data-bank, molecule, proteins, pdb, molecular-modeling, molecular, molecular-graphics, molecular-dynamics, molecular-structures, mmcif, 3d-visualization
has_wiki
homepagehttps://bradyajohnston.github.io/MolecularNodes/
has_readme
has_docs_dir
has_description

安全

可见的安全与供应链实践是否稳固,且不存在未解决的高风险司法辖区暴露?

46存在风险 · 占总体的 16%

安全态势

46存在风险
评分方式
7.5/7.5Binary-Artifacts — no binaries found in the repo
0/7.5Branch-Protection — 无数据
0.5/2.5CI-Tests — 6 out of 29 merged PRs checked by a CI test -- score normalized to 2
0/2.5CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected
4.5/7.5Code-Review — Found 20/30 approved changesets -- score normalized to 6
2.5/2.5Contributors — project has 15 contributing companies or organizations
10/10Dangerous-Workflow — no dangerous workflow patterns detected
0/7.5Dependency-Update-Tool — no update tool detected
0/5Fuzzing — project is not fuzzed
2.5/2.5许可证 — license file detected
5.2/7.5Maintained — 0 commit(s) and 9 issue activity found in the last 90 days -- score normalized to 7
5/5Packaging — packaging workflow detected
0/5Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
0/5SAST — SAST tool is not run on all commits -- score normalized to 0
0/5Security-Policy — security policy file not detected
0/7.5Signed-Releases — Project has not signed or included provenance with any releases.
0/7.5Token-Permissions — detected GitHub workflow tokens with excessive permissions
7.5/7.5Vulnerabilities — 0 existing vulnerabilities detected
所用输入
sourceopenssf_scorecard
checks_evaluated17
scorecard_versionv5.5.0
checks_inconclusive1
scorecard_aggregate4.6
已排除计分(无数据或不适用):branch_protection。 其余权重已重新归一化。

AI 就绪度

该仓库在多大程度上具备与 AI 编码代理协同开发与维护的条件?这是一枚独立的实验性徽章——权重为 0.0,因此单独呈现,不影响总体健康评分。

35存在风险 · 占总体的 0%
评分方式
0/45代理指令 — 没有 CLAUDE.md / AGENTS.md / 编辑器规则
0/15机器可读文档(llms.txt)
0/40可读的提交历史 — 无数据
所用输入
has_llms_txt
legible_history_share
agent_instruction_files
agent_instruction_max_bytes
已排除计分(无数据或不适用):可读的提交历史。 其余权重已重新归一化。
评分方式
0/18一条命令的引导启动
22/22自动化测试
11/11Lint / 格式化配置
0/11静态类型检查
10/10可复现环境 — lockfile
0/10已体现的代理实践 — 无数据
0/8自动化维护 — 无数据
0/10OpenSSF Scorecard:Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0
所用输入
has_nix
has_tests
lockfilesuv.lock
has_dockerfile
typed_language
bootstrap_files
has_devcontainer
has_linter_config
typecheck_configs
agent_commit_share
toolchain_manifests
dependency_bot_commit_share
已排除计分(无数据或不适用):已体现的代理实践, 自动化维护。 其余权重已重新归一化。
评分方式
0/45可类型检查的代码 — Python,未配置类型检查
54.6/55可控的文件大小 — 采样的 131 个源文件中有 1 个超过 60KB
所用输入
primary_languagePython
largest_source_bytes90,872
source_files_sampled131
oversized_source_files1

机器可读接口

40存在风险
评分方式
0/40API 模式(OpenAPI/GraphQL/proto)
0/20MCP 服务器
40/40可运行示例 — examples
所用输入
example_dirsexamples
has_mcp_signal
api_schema_files

关键数据

1,317GitHub 星标
33贡献者
134最近 12 个月提交数
6距最近推送天数
92发布版本数
1巴士系数(bus factor)
85开放议题
PyPI软件包生态系统数

更多细节

OpenSSF Scorecard 4.6 / 10
4.6综合

来自开源项目 OpenSSF Scorecard 的独立、工具无关的安全评估。每项检查奖励的是安全实践本身,而非特定供应商的工具。Scorecard 无法判定的检查项标记为 不适用,并从安全评分中剔除(绝不按零分计)。Scorecard v5.5.0 · 2026-07-15 14:46 UTC

10Binary-Artifactsno binaries found in the repo
不适用Branch-Protectioninternal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md
2CI-Tests6 out of 29 merged PRs checked by a CI test -- score normalized to 2
0CII-Best-Practicesno effort to earn an OpenSSF best practices badge detected
6Code-ReviewFound 20/30 approved changesets -- score normalized to 6
10Contributorsproject has 15 contributing companies or organizations
10Dangerous-Workflowno dangerous workflow patterns detected
0Dependency-Update-Toolno update tool detected
0Fuzzingproject is not fuzzed
10Licenselicense file detected
7Maintained0 commit(s) and 9 issue activity found in the last 90 days -- score normalized to 7
10Packagingpackaging workflow detected
0Pinned-Dependenciesdependency not pinned by hash detected -- score normalized to 0
0SASTSAST tool is not run on all commits -- score normalized to 0
0Security-Policysecurity policy file not detected
0Signed-ReleasesProject has not signed or included provenance with any releases.
0Token-Permissionsdetected GitHub workflow tokens with excessive permissions
10Vulnerabilities0 existing vulnerabilities detected
直接依赖 8
注册表软件包版本约束清单文件
PyPIdatabpy>=0.7.0pyproject.toml
PyPImdanalysis>=2.10pyproject.toml
PyPIbiotite>=1.5pyproject.toml
PyPImrcfilepyproject.toml
PyPIstarfilepyproject.toml
PyPIPyYAMLpyproject.toml
PyPIimdclient>=0.2.3pyproject.toml
PyPIpandas<3.0.0pyproject.toml
全部依赖 183

来自 GitHub 依赖图的完整解析依赖集合:8 个直接依赖与 175 个间接(传递)软件包。仓库提交锁文件时,传递闭包才是完整的。

注册表软件包版本关系
PyPIbiotite1.6.0直接
PyPIdatabpy0.7.0直接
PyPIimdclient0.2.3直接
PyPImdanalysis2.10.0直接
PyPImrcfile1.5.4直接
PyPIpandas2.3.3直接
PyPIpyyaml6.0.3直接
PyPIstarfile0.5.13直接
PyPIannotated-types0.7.0间接
PyPIanyio4.12.1间接
PyPIappnope0.1.4间接
PyPIargon2-cffi25.1.0间接
PyPIargon2-cffi-bindings25.1.0间接
PyPIarrow1.4.0间接
PyPIasttokens3.0.1间接
PyPIasync-lru2.2.0间接
PyPIattrs25.4.0间接
PyPIbabel2.18.0间接
PyPIbeartype0.22.9间接
PyPIbeautifulsoup44.14.3间接
PyPIbiotraj1.2.2间接
PyPIblack26.3.1间接
PyPIbleach6.3.0间接
PyPIbpy5.1.0间接
PyPIcertifi2026.2.25间接
PyPIcffi2.0.0间接
PyPIcfgv3.5.0间接
PyPIcharset-normalizer3.4.6间接
PyPIclick8.3.1间接
PyPIcolorama0.4.6间接
PyPIcomm0.2.3间接
PyPIcontourpy1.3.3间接
PyPIcoverage7.13.4间接
PyPIcycler0.12.1间接
PyPIcython3.2.4间接
PyPIdebugpy1.8.20间接
PyPIdecorator5.2.1间接
PyPIdefusedxml0.7.1间接
PyPIdistlib0.4.0间接
PyPIexecnet2.1.2间接
PyPIexecuting2.2.1间接
PyPIfake-bpy-module20260316间接
PyPIfastjsonschema2.21.2间接
PyPIfilelock3.25.2间接
PyPIfonttools4.62.1间接
PyPIfqdn1.5.1间接
PyPIgreenlet3.3.2间接
PyPIgriddataformats1.1.0间接
PyPIgriffe1.15.0间接
PyPIh110.16.0间接
PyPIhttpcore1.0.9间接
PyPIhttpx0.28.1间接
PyPIhypothesis6.151.9间接
PyPIidentify2.6.18间接
PyPIidna3.11间接
PyPIimportlib-metadata8.7.1间接
PyPIimportlib-resources6.5.2间接
PyPIiniconfig2.3.0间接
PyPIipykernel7.2.0间接
PyPIipython9.11.0间接
PyPIipython-pygments-lexers1.1.1间接
PyPIipywidgets8.1.8间接
PyPIisoduration20.11.0间接
PyPIjedi0.19.2间接
PyPIjinja23.1.6间接
PyPIjoblib1.5.3间接
PyPIjson50.13.0间接
PyPIjsonpointer3.0.0间接
PyPIjsonschema4.26.0间接
PyPIjsonschema-specifications2025.9.1间接
PyPIjupyter1.1.1间接
PyPIjupyter-cache1.0.1间接
PyPIjupyter-client8.8.0间接
PyPIjupyter-console6.6.3间接
PyPIjupyter-core5.9.1间接
PyPIjupyter-events0.12.0间接
PyPIjupyter-lsp2.3.0间接
PyPIjupyter-server2.17.0间接
PyPIjupyter-server-terminals0.5.4间接
PyPIjupyterlab4.5.6间接
PyPIjupyterlab-pygments0.3.0间接
PyPIjupyterlab-server2.28.0间接
PyPIjupyterlab-widgets3.0.16间接
PyPIkiwisolver1.5.0间接
PyPIlark1.3.1间接
PyPImarkdown-it-py4.0.0间接
PyPImarkupsafe3.0.3间接
PyPImatplotlib3.10.8间接
PyPImatplotlib-inline0.2.1间接
PyPImda-xdrlib0.2.0间接
PyPImdanalysisdata0.9.0间接
PyPImdanalysistests2.10.0间接
PyPImdurl0.1.2间接
PyPImistune3.2.0间接
PyPImmtf-python1.1.3间接
PyPImsgpack1.1.2间接
PyPImypy-extensions1.1.0间接
PyPInbclient0.10.4间接
PyPInbconvert7.17.0间接
PyPInbformat5.10.4间接
PyPInest-asyncio1.6.0间接
PyPInetworkx3.6.1间接
PyPInodeenv1.10.0间接
PyPInodepad0.3.0间接
PyPInotebook7.5.5间接
PyPInotebook-shim0.2.4间接
PyPInumpy1.26.4间接
PyPIpackaging26.0间接
PyPIpandocfilters1.5.1间接
PyPIparso0.8.6间接
PyPIpathspec1.0.4间接
PyPIpexpect4.9.0间接
PyPIpillow12.1.1间接
PyPIplatformdirs4.9.4间接
PyPIpluggy1.6.0间接
PyPIplum-dispatch2.7.1间接
PyPIpooch1.9.0间接
PyPIpre-commit4.5.1间接
PyPIprometheus-client0.24.1间接
PyPIprompt-toolkit3.0.52间接
PyPIpsutil7.2.2间接
PyPIptyprocess0.7.0间接
PyPIpure-eval0.2.3间接
PyPIpyarrow23.0.1间接
PyPIpycparser3.0间接
PyPIpydantic2.12.5间接
PyPIpydantic-core2.41.5间接
PyPIpygments2.19.2间接
PyPIpyparsing3.3.2间接
PyPIpytest9.0.2间接
PyPIpytest-cov7.0.0间接
PyPIpytest-xdist3.8.0间接
PyPIpython-dateutil2.9.0.post0间接
PyPIpython-discovery1.1.3间接
PyPIpython-json-logger4.0.0间接
PyPIpytokens0.4.1间接
PyPIpytz2026.1.post1间接
PyPIpywinpty3.0.3间接
PyPIpyzmq27.1.0间接
PyPIquarto-cli1.8.27间接
PyPIquartodoc0.11.1间接
PyPIrdkit2025.9.6间接
PyPIreferencing0.37.0间接
PyPIrequests2.32.5间接
PyPIrfc3339-validator0.1.4间接
PyPIrfc3986-validator0.1.1间接
PyPIrfc3987-syntax1.1.0间接
PyPIrich14.3.3间接
PyPIrpds-py0.30.0间接
PyPIruff0.15.6间接
PyPIscipy1.17.1间接
PyPIsend2trash2.1.0间接
PyPIsetuptools80.10.2间接
PyPIsix1.17.0间接
PyPIsortedcontainers2.4.0间接
PyPIsoupsieve2.8.3间接
PyPIsphobjinv2.3.1.3间接
PyPIsqlalchemy2.0.48间接
PyPIstack-data0.6.3间接
PyPIsyrupy5.1.0间接
PyPItabulate0.10.0间接
PyPIterminado0.18.1间接
PyPIthreadpoolctl3.6.0间接
PyPItinycss21.4.0间接
PyPItomlkit0.14.0间接
PyPItornado6.5.5间接
PyPItqdm4.67.3间接
PyPItraitlets5.14.3间接
PyPItyping-extensions4.15.0间接
PyPItyping-inspection0.4.2间接
PyPItzdata2025.3间接
PyPIuri-template1.3.0间接
PyPIurllib32.6.3间接
PyPIvirtualenv21.2.0间接
PyPIwatchdog6.0.0间接
PyPIwcwidth0.6.0间接
PyPIwebcolors25.10.0间接
PyPIwebencodings0.5.1间接
PyPIwebsocket-client1.9.0间接
PyPIwheel0.46.3间接
PyPIwidgetsnbextension4.0.15间接
PyPIzipp3.23.0间接
PyPIzstandard0.25.0间接
原始 JSON 报告 机器可读
{
  "data": {
    "repo": {
      "topics": [
        "blender",
        "biochemistry",
        "protein",
        "protein-structure",
        "protein-visualization",
        "sciart",
        "visualisation",
        "structural-biology",
        "blender-addon",
        "protein-data-bank",
        "molecule",
        "proteins",
        "pdb",
        "molecular-modeling",
        "molecular",
        "molecular-graphics",
        "molecular-dynamics",
        "molecular-structures",
        "mmcif",
        "3d-visualization"
      ],
      "is_fork": false,
      "size_kb": 1425648,
      "has_wiki": true,
      "homepage": "https://bradyajohnston.github.io/MolecularNodes/",
      "languages": {
        "Python": 1016187
      },
      "pushed_at": "2026-07-08T15:40:30Z",
      "created_at": "2022-04-25T07:14:42Z",
      "owner_type": "User",
      "updated_at": "2026-07-14T22:30:26Z",
      "description": "Toolbox for molecular animations in Blender, powered by Geometry Nodes.",
      "is_archived": false,
      "is_disabled": false,
      "license_spdx": "GPL-3.0",
      "default_branch": "main",
      "primary_language": "Python",
      "significant_languages": [
        "Python"
      ]
    },
    "owner": {
      "blog": "bradyajohnston.github.io",
      "name": "Brady Johnston",
      "type": "User",
      "login": "BradyAJohnston",
      "company": "Freelance scientific animator & developer.",
      "location": "Edinburgh, Scotland",
      "followers": 462,
      "avatar_url": "https://avatars.githubusercontent.com/u/36021261?v=4",
      "created_at": "2018-02-01T02:32:06Z",
      "is_verified": null,
      "public_repos": 124,
      "account_age_days": 3086
    },
    "activity": {
      "releases_count": 92,
      "commits_last_year": 134,
      "latest_release_at": "2026-03-17T17:34:56Z",
      "latest_release_tag": "v4.5.12",
      "releases_from_tags": false,
      "days_since_last_push": 6,
      "active_weeks_last_year": 31,
      "days_since_latest_release": 119,
      "mean_days_between_releases": 20.5
    },
    "community": {
      "has_readme": true,
      "has_license": true,
      "has_description": true,
      "has_contributing": true,
      "health_percentage": 71,
      "has_issue_template": false,
      "has_code_of_conduct": false,
      "has_pull_request_template": false
    },
    "ecosystem": {
      "packages": [
        {
          "name": "molecularnodes",
          "exists": true,
          "license": null,
          "keywords": [],
          "ecosystem": "pypi",
          "matches_repo": true,
          "registry_url": "https://pypi.org/project/molecularnodes/",
          "is_deprecated": false,
          "latest_version": "4.5.12",
          "repository_url": "https://github.com/bradyajohnston/MolecularNodes",
          "versions_count": 27,
          "total_downloads": null,
          "dependents_count": null,
          "deprecation_note": null,
          "maintainers_count": null,
          "monthly_downloads": null,
          "first_published_at": "2023-09-28T05:37:25.805615Z",
          "latest_published_at": "2026-03-17T17:21:17.139296Z",
          "latest_version_yanked": null,
          "days_since_latest_publish": 119
        }
      ]
    },
    "popularity": {
      "forks": 124,
      "stars": 1317,
      "watchers": 20,
      "open_issues_and_prs": 96
    },
    "ai_readiness": {
      "has_nix": false,
      "example_dirs": [
        "examples"
      ],
      "has_llms_txt": false,
      "has_dockerfile": false,
      "has_mcp_signal": false,
      "bootstrap_files": [],
      "api_schema_files": [],
      "has_devcontainer": false,
      "typecheck_configs": [],
      "largest_source_bytes": 90872,
      "source_files_sampled": 131,
      "oversized_source_files": 1,
      "agent_instruction_files": [],
      "agent_instruction_max_bytes": null
    },
    "dependencies": {
      "manifests": [
        "pyproject.toml"
      ],
      "ecosystems": [
        "pypi"
      ],
      "dependencies": [
        {
          "name": "databpy",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": ">=0.7.0"
        },
        {
          "name": "mdanalysis",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": ">=2.10"
        },
        {
          "name": "biotite",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": ">=1.5"
        },
        {
          "name": "mrcfile",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": null
        },
        {
          "name": "starfile",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": null
        },
        {
          "name": "PyYAML",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": null
        },
        {
          "name": "imdclient",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": ">=0.2.3"
        },
        {
          "name": "pandas",
          "manifest": "pyproject.toml",
          "ecosystem": "pypi",
          "version_constraint": "<3.0.0"
        }
      ],
      "all_dependencies": {
        "error": null,
        "source": "github-sbom",
        "packages": [
          {
            "name": "biotite",
            "direct": true,
            "version": "1.6.0",
            "ecosystem": "pypi"
          },
          {
            "name": "databpy",
            "direct": true,
            "version": "0.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "imdclient",
            "direct": true,
            "version": "0.2.3",
            "ecosystem": "pypi"
          },
          {
            "name": "mdanalysis",
            "direct": true,
            "version": "2.10.0",
            "ecosystem": "pypi"
          },
          {
            "name": "mrcfile",
            "direct": true,
            "version": "1.5.4",
            "ecosystem": "pypi"
          },
          {
            "name": "pandas",
            "direct": true,
            "version": "2.3.3",
            "ecosystem": "pypi"
          },
          {
            "name": "pyyaml",
            "direct": true,
            "version": "6.0.3",
            "ecosystem": "pypi"
          },
          {
            "name": "starfile",
            "direct": true,
            "version": "0.5.13",
            "ecosystem": "pypi"
          },
          {
            "name": "annotated-types",
            "direct": false,
            "version": "0.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "anyio",
            "direct": false,
            "version": "4.12.1",
            "ecosystem": "pypi"
          },
          {
            "name": "appnope",
            "direct": false,
            "version": "0.1.4",
            "ecosystem": "pypi"
          },
          {
            "name": "argon2-cffi",
            "direct": false,
            "version": "25.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "argon2-cffi-bindings",
            "direct": false,
            "version": "25.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "arrow",
            "direct": false,
            "version": "1.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "asttokens",
            "direct": false,
            "version": "3.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "async-lru",
            "direct": false,
            "version": "2.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "attrs",
            "direct": false,
            "version": "25.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "babel",
            "direct": false,
            "version": "2.18.0",
            "ecosystem": "pypi"
          },
          {
            "name": "beartype",
            "direct": false,
            "version": "0.22.9",
            "ecosystem": "pypi"
          },
          {
            "name": "beautifulsoup4",
            "direct": false,
            "version": "4.14.3",
            "ecosystem": "pypi"
          },
          {
            "name": "biotraj",
            "direct": false,
            "version": "1.2.2",
            "ecosystem": "pypi"
          },
          {
            "name": "black",
            "direct": false,
            "version": "26.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "bleach",
            "direct": false,
            "version": "6.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "bpy",
            "direct": false,
            "version": "5.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "certifi",
            "direct": false,
            "version": "2026.2.25",
            "ecosystem": "pypi"
          },
          {
            "name": "cffi",
            "direct": false,
            "version": "2.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "cfgv",
            "direct": false,
            "version": "3.5.0",
            "ecosystem": "pypi"
          },
          {
            "name": "charset-normalizer",
            "direct": false,
            "version": "3.4.6",
            "ecosystem": "pypi"
          },
          {
            "name": "click",
            "direct": false,
            "version": "8.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "colorama",
            "direct": false,
            "version": "0.4.6",
            "ecosystem": "pypi"
          },
          {
            "name": "comm",
            "direct": false,
            "version": "0.2.3",
            "ecosystem": "pypi"
          },
          {
            "name": "contourpy",
            "direct": false,
            "version": "1.3.3",
            "ecosystem": "pypi"
          },
          {
            "name": "coverage",
            "direct": false,
            "version": "7.13.4",
            "ecosystem": "pypi"
          },
          {
            "name": "cycler",
            "direct": false,
            "version": "0.12.1",
            "ecosystem": "pypi"
          },
          {
            "name": "cython",
            "direct": false,
            "version": "3.2.4",
            "ecosystem": "pypi"
          },
          {
            "name": "debugpy",
            "direct": false,
            "version": "1.8.20",
            "ecosystem": "pypi"
          },
          {
            "name": "decorator",
            "direct": false,
            "version": "5.2.1",
            "ecosystem": "pypi"
          },
          {
            "name": "defusedxml",
            "direct": false,
            "version": "0.7.1",
            "ecosystem": "pypi"
          },
          {
            "name": "distlib",
            "direct": false,
            "version": "0.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "execnet",
            "direct": false,
            "version": "2.1.2",
            "ecosystem": "pypi"
          },
          {
            "name": "executing",
            "direct": false,
            "version": "2.2.1",
            "ecosystem": "pypi"
          },
          {
            "name": "fake-bpy-module",
            "direct": false,
            "version": "20260316",
            "ecosystem": "pypi"
          },
          {
            "name": "fastjsonschema",
            "direct": false,
            "version": "2.21.2",
            "ecosystem": "pypi"
          },
          {
            "name": "filelock",
            "direct": false,
            "version": "3.25.2",
            "ecosystem": "pypi"
          },
          {
            "name": "fonttools",
            "direct": false,
            "version": "4.62.1",
            "ecosystem": "pypi"
          },
          {
            "name": "fqdn",
            "direct": false,
            "version": "1.5.1",
            "ecosystem": "pypi"
          },
          {
            "name": "greenlet",
            "direct": false,
            "version": "3.3.2",
            "ecosystem": "pypi"
          },
          {
            "name": "griddataformats",
            "direct": false,
            "version": "1.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "griffe",
            "direct": false,
            "version": "1.15.0",
            "ecosystem": "pypi"
          },
          {
            "name": "h11",
            "direct": false,
            "version": "0.16.0",
            "ecosystem": "pypi"
          },
          {
            "name": "httpcore",
            "direct": false,
            "version": "1.0.9",
            "ecosystem": "pypi"
          },
          {
            "name": "httpx",
            "direct": false,
            "version": "0.28.1",
            "ecosystem": "pypi"
          },
          {
            "name": "hypothesis",
            "direct": false,
            "version": "6.151.9",
            "ecosystem": "pypi"
          },
          {
            "name": "identify",
            "direct": false,
            "version": "2.6.18",
            "ecosystem": "pypi"
          },
          {
            "name": "idna",
            "direct": false,
            "version": "3.11",
            "ecosystem": "pypi"
          },
          {
            "name": "importlib-metadata",
            "direct": false,
            "version": "8.7.1",
            "ecosystem": "pypi"
          },
          {
            "name": "importlib-resources",
            "direct": false,
            "version": "6.5.2",
            "ecosystem": "pypi"
          },
          {
            "name": "iniconfig",
            "direct": false,
            "version": "2.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "ipykernel",
            "direct": false,
            "version": "7.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "ipython",
            "direct": false,
            "version": "9.11.0",
            "ecosystem": "pypi"
          },
          {
            "name": "ipython-pygments-lexers",
            "direct": false,
            "version": "1.1.1",
            "ecosystem": "pypi"
          },
          {
            "name": "ipywidgets",
            "direct": false,
            "version": "8.1.8",
            "ecosystem": "pypi"
          },
          {
            "name": "isoduration",
            "direct": false,
            "version": "20.11.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jedi",
            "direct": false,
            "version": "0.19.2",
            "ecosystem": "pypi"
          },
          {
            "name": "jinja2",
            "direct": false,
            "version": "3.1.6",
            "ecosystem": "pypi"
          },
          {
            "name": "joblib",
            "direct": false,
            "version": "1.5.3",
            "ecosystem": "pypi"
          },
          {
            "name": "json5",
            "direct": false,
            "version": "0.13.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jsonpointer",
            "direct": false,
            "version": "3.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jsonschema",
            "direct": false,
            "version": "4.26.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jsonschema-specifications",
            "direct": false,
            "version": "2025.9.1",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyter",
            "direct": false,
            "version": "1.1.1",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyter-cache",
            "direct": false,
            "version": "1.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyter-client",
            "direct": false,
            "version": "8.8.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyter-console",
            "direct": false,
            "version": "6.6.3",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyter-core",
            "direct": false,
            "version": "5.9.1",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyter-events",
            "direct": false,
            "version": "0.12.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyter-lsp",
            "direct": false,
            "version": "2.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyter-server",
            "direct": false,
            "version": "2.17.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyter-server-terminals",
            "direct": false,
            "version": "0.5.4",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyterlab",
            "direct": false,
            "version": "4.5.6",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyterlab-pygments",
            "direct": false,
            "version": "0.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyterlab-server",
            "direct": false,
            "version": "2.28.0",
            "ecosystem": "pypi"
          },
          {
            "name": "jupyterlab-widgets",
            "direct": false,
            "version": "3.0.16",
            "ecosystem": "pypi"
          },
          {
            "name": "kiwisolver",
            "direct": false,
            "version": "1.5.0",
            "ecosystem": "pypi"
          },
          {
            "name": "lark",
            "direct": false,
            "version": "1.3.1",
            "ecosystem": "pypi"
          },
          {
            "name": "markdown-it-py",
            "direct": false,
            "version": "4.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "markupsafe",
            "direct": false,
            "version": "3.0.3",
            "ecosystem": "pypi"
          },
          {
            "name": "matplotlib",
            "direct": false,
            "version": "3.10.8",
            "ecosystem": "pypi"
          },
          {
            "name": "matplotlib-inline",
            "direct": false,
            "version": "0.2.1",
            "ecosystem": "pypi"
          },
          {
            "name": "mda-xdrlib",
            "direct": false,
            "version": "0.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "mdanalysisdata",
            "direct": false,
            "version": "0.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "mdanalysistests",
            "direct": false,
            "version": "2.10.0",
            "ecosystem": "pypi"
          },
          {
            "name": "mdurl",
            "direct": false,
            "version": "0.1.2",
            "ecosystem": "pypi"
          },
          {
            "name": "mistune",
            "direct": false,
            "version": "3.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "mmtf-python",
            "direct": false,
            "version": "1.1.3",
            "ecosystem": "pypi"
          },
          {
            "name": "msgpack",
            "direct": false,
            "version": "1.1.2",
            "ecosystem": "pypi"
          },
          {
            "name": "mypy-extensions",
            "direct": false,
            "version": "1.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "nbclient",
            "direct": false,
            "version": "0.10.4",
            "ecosystem": "pypi"
          },
          {
            "name": "nbconvert",
            "direct": false,
            "version": "7.17.0",
            "ecosystem": "pypi"
          },
          {
            "name": "nbformat",
            "direct": false,
            "version": "5.10.4",
            "ecosystem": "pypi"
          },
          {
            "name": "nest-asyncio",
            "direct": false,
            "version": "1.6.0",
            "ecosystem": "pypi"
          },
          {
            "name": "networkx",
            "direct": false,
            "version": "3.6.1",
            "ecosystem": "pypi"
          },
          {
            "name": "nodeenv",
            "direct": false,
            "version": "1.10.0",
            "ecosystem": "pypi"
          },
          {
            "name": "nodepad",
            "direct": false,
            "version": "0.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "notebook",
            "direct": false,
            "version": "7.5.5",
            "ecosystem": "pypi"
          },
          {
            "name": "notebook-shim",
            "direct": false,
            "version": "0.2.4",
            "ecosystem": "pypi"
          },
          {
            "name": "numpy",
            "direct": false,
            "version": "1.26.4",
            "ecosystem": "pypi"
          },
          {
            "name": "packaging",
            "direct": false,
            "version": "26.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pandocfilters",
            "direct": false,
            "version": "1.5.1",
            "ecosystem": "pypi"
          },
          {
            "name": "parso",
            "direct": false,
            "version": "0.8.6",
            "ecosystem": "pypi"
          },
          {
            "name": "pathspec",
            "direct": false,
            "version": "1.0.4",
            "ecosystem": "pypi"
          },
          {
            "name": "pexpect",
            "direct": false,
            "version": "4.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pillow",
            "direct": false,
            "version": "12.1.1",
            "ecosystem": "pypi"
          },
          {
            "name": "platformdirs",
            "direct": false,
            "version": "4.9.4",
            "ecosystem": "pypi"
          },
          {
            "name": "pluggy",
            "direct": false,
            "version": "1.6.0",
            "ecosystem": "pypi"
          },
          {
            "name": "plum-dispatch",
            "direct": false,
            "version": "2.7.1",
            "ecosystem": "pypi"
          },
          {
            "name": "pooch",
            "direct": false,
            "version": "1.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pre-commit",
            "direct": false,
            "version": "4.5.1",
            "ecosystem": "pypi"
          },
          {
            "name": "prometheus-client",
            "direct": false,
            "version": "0.24.1",
            "ecosystem": "pypi"
          },
          {
            "name": "prompt-toolkit",
            "direct": false,
            "version": "3.0.52",
            "ecosystem": "pypi"
          },
          {
            "name": "psutil",
            "direct": false,
            "version": "7.2.2",
            "ecosystem": "pypi"
          },
          {
            "name": "ptyprocess",
            "direct": false,
            "version": "0.7.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pure-eval",
            "direct": false,
            "version": "0.2.3",
            "ecosystem": "pypi"
          },
          {
            "name": "pyarrow",
            "direct": false,
            "version": "23.0.1",
            "ecosystem": "pypi"
          },
          {
            "name": "pycparser",
            "direct": false,
            "version": "3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pydantic",
            "direct": false,
            "version": "2.12.5",
            "ecosystem": "pypi"
          },
          {
            "name": "pydantic-core",
            "direct": false,
            "version": "2.41.5",
            "ecosystem": "pypi"
          },
          {
            "name": "pygments",
            "direct": false,
            "version": "2.19.2",
            "ecosystem": "pypi"
          },
          {
            "name": "pyparsing",
            "direct": false,
            "version": "3.3.2",
            "ecosystem": "pypi"
          },
          {
            "name": "pytest",
            "direct": false,
            "version": "9.0.2",
            "ecosystem": "pypi"
          },
          {
            "name": "pytest-cov",
            "direct": false,
            "version": "7.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pytest-xdist",
            "direct": false,
            "version": "3.8.0",
            "ecosystem": "pypi"
          },
          {
            "name": "python-dateutil",
            "direct": false,
            "version": "2.9.0.post0",
            "ecosystem": "pypi"
          },
          {
            "name": "python-discovery",
            "direct": false,
            "version": "1.1.3",
            "ecosystem": "pypi"
          },
          {
            "name": "python-json-logger",
            "direct": false,
            "version": "4.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "pytokens",
            "direct": false,
            "version": "0.4.1",
            "ecosystem": "pypi"
          },
          {
            "name": "pytz",
            "direct": false,
            "version": "2026.1.post1",
            "ecosystem": "pypi"
          },
          {
            "name": "pywinpty",
            "direct": false,
            "version": "3.0.3",
            "ecosystem": "pypi"
          },
          {
            "name": "pyzmq",
            "direct": false,
            "version": "27.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "quarto-cli",
            "direct": false,
            "version": "1.8.27",
            "ecosystem": "pypi"
          },
          {
            "name": "quartodoc",
            "direct": false,
            "version": "0.11.1",
            "ecosystem": "pypi"
          },
          {
            "name": "rdkit",
            "direct": false,
            "version": "2025.9.6",
            "ecosystem": "pypi"
          },
          {
            "name": "referencing",
            "direct": false,
            "version": "0.37.0",
            "ecosystem": "pypi"
          },
          {
            "name": "requests",
            "direct": false,
            "version": "2.32.5",
            "ecosystem": "pypi"
          },
          {
            "name": "rfc3339-validator",
            "direct": false,
            "version": "0.1.4",
            "ecosystem": "pypi"
          },
          {
            "name": "rfc3986-validator",
            "direct": false,
            "version": "0.1.1",
            "ecosystem": "pypi"
          },
          {
            "name": "rfc3987-syntax",
            "direct": false,
            "version": "1.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "rich",
            "direct": false,
            "version": "14.3.3",
            "ecosystem": "pypi"
          },
          {
            "name": "rpds-py",
            "direct": false,
            "version": "0.30.0",
            "ecosystem": "pypi"
          },
          {
            "name": "ruff",
            "direct": false,
            "version": "0.15.6",
            "ecosystem": "pypi"
          },
          {
            "name": "scipy",
            "direct": false,
            "version": "1.17.1",
            "ecosystem": "pypi"
          },
          {
            "name": "send2trash",
            "direct": false,
            "version": "2.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "setuptools",
            "direct": false,
            "version": "80.10.2",
            "ecosystem": "pypi"
          },
          {
            "name": "six",
            "direct": false,
            "version": "1.17.0",
            "ecosystem": "pypi"
          },
          {
            "name": "sortedcontainers",
            "direct": false,
            "version": "2.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "soupsieve",
            "direct": false,
            "version": "2.8.3",
            "ecosystem": "pypi"
          },
          {
            "name": "sphobjinv",
            "direct": false,
            "version": "2.3.1.3",
            "ecosystem": "pypi"
          },
          {
            "name": "sqlalchemy",
            "direct": false,
            "version": "2.0.48",
            "ecosystem": "pypi"
          },
          {
            "name": "stack-data",
            "direct": false,
            "version": "0.6.3",
            "ecosystem": "pypi"
          },
          {
            "name": "syrupy",
            "direct": false,
            "version": "5.1.0",
            "ecosystem": "pypi"
          },
          {
            "name": "tabulate",
            "direct": false,
            "version": "0.10.0",
            "ecosystem": "pypi"
          },
          {
            "name": "terminado",
            "direct": false,
            "version": "0.18.1",
            "ecosystem": "pypi"
          },
          {
            "name": "threadpoolctl",
            "direct": false,
            "version": "3.6.0",
            "ecosystem": "pypi"
          },
          {
            "name": "tinycss2",
            "direct": false,
            "version": "1.4.0",
            "ecosystem": "pypi"
          },
          {
            "name": "tomlkit",
            "direct": false,
            "version": "0.14.0",
            "ecosystem": "pypi"
          },
          {
            "name": "tornado",
            "direct": false,
            "version": "6.5.5",
            "ecosystem": "pypi"
          },
          {
            "name": "tqdm",
            "direct": false,
            "version": "4.67.3",
            "ecosystem": "pypi"
          },
          {
            "name": "traitlets",
            "direct": false,
            "version": "5.14.3",
            "ecosystem": "pypi"
          },
          {
            "name": "typing-extensions",
            "direct": false,
            "version": "4.15.0",
            "ecosystem": "pypi"
          },
          {
            "name": "typing-inspection",
            "direct": false,
            "version": "0.4.2",
            "ecosystem": "pypi"
          },
          {
            "name": "tzdata",
            "direct": false,
            "version": "2025.3",
            "ecosystem": "pypi"
          },
          {
            "name": "uri-template",
            "direct": false,
            "version": "1.3.0",
            "ecosystem": "pypi"
          },
          {
            "name": "urllib3",
            "direct": false,
            "version": "2.6.3",
            "ecosystem": "pypi"
          },
          {
            "name": "virtualenv",
            "direct": false,
            "version": "21.2.0",
            "ecosystem": "pypi"
          },
          {
            "name": "watchdog",
            "direct": false,
            "version": "6.0.0",
            "ecosystem": "pypi"
          },
          {
            "name": "wcwidth",
            "direct": false,
            "version": "0.6.0",
            "ecosystem": "pypi"
          },
          {
            "name": "webcolors",
            "direct": false,
            "version": "25.10.0",
            "ecosystem": "pypi"
          },
          {
            "name": "webencodings",
            "direct": false,
            "version": "0.5.1",
            "ecosystem": "pypi"
          },
          {
            "name": "websocket-client",
            "direct": false,
            "version": "1.9.0",
            "ecosystem": "pypi"
          },
          {
            "name": "wheel",
            "direct": false,
            "version": "0.46.3",
            "ecosystem": "pypi"
          },
          {
            "name": "widgetsnbextension",
            "direct": false,
            "version": "4.0.15",
            "ecosystem": "pypi"
          },
          {
            "name": "zipp",
            "direct": false,
            "version": "3.23.0",
            "ecosystem": "pypi"
          },
          {
            "name": "zstandard",
            "direct": false,
            "version": "0.25.0",
            "ecosystem": "pypi"
          }
        ],
        "collected": true,
        "truncated": false,
        "total_count": 183,
        "direct_count": 8,
        "indirect_count": 175
      }
    },
    "maintainership": {
      "issues": {
        "open_prs": 11,
        "merged_prs": 503,
        "open_issues": 85,
        "closed_ratio": 0.834,
        "closed_issues": 426,
        "closed_unmerged_prs": 43
      },
      "bus_factor": 1,
      "top_contributors": [
        {
          "type": "User",
          "login": "BradyAJohnston",
          "commits": 1698,
          "avatar_url": "https://avatars.githubusercontent.com/u/36021261?u=fde5efd29ed2ad5af5e5c8736de5fe802b39c28d&v=4"
        },
        {
          "type": "User",
          "login": "PardhavMaradani",
          "commits": 72,
          "avatar_url": "https://avatars.githubusercontent.com/u/66913993?u=013d0e87b46db7b56d67b3412bc0995f04826bbc&v=4"
        },
        {
          "type": "User",
          "login": "jojoelfe",
          "commits": 53,
          "avatar_url": "https://avatars.githubusercontent.com/u/6081039?u=efec3688519be51c1e7c8db918ac6c4f7fd34046&v=4"
        },
        {
          "type": "User",
          "login": "rbdavid",
          "commits": 48,
          "avatar_url": "https://avatars.githubusercontent.com/u/8484541?v=4"
        },
        {
          "type": "User",
          "login": "yuxuanzhuang",
          "commits": 44,
          "avatar_url": "https://avatars.githubusercontent.com/u/24636656?u=20a43868068dad3af801473b78c4ee34ea8997ee&v=4"
        },
        {
          "type": "User",
          "login": "YaoYinYing",
          "commits": 16,
          "avatar_url": "https://avatars.githubusercontent.com/u/33014714?u=51792f5f7c4187d379bd1c96f92429f48efc3553&v=4"
        },
        {
          "type": "User",
          "login": "zachcp",
          "commits": 12,
          "avatar_url": "https://avatars.githubusercontent.com/u/1260667?u=9627db109ab5f0e7ffc20b2050e03f626ff3e4ad&v=4"
        },
        {
          "type": "User",
          "login": "tubiana",
          "commits": 11,
          "avatar_url": "https://avatars.githubusercontent.com/u/8037224?u=ad2d94566b9d1fba8e77b90e95340118763b8fae&v=4"
        },
        {
          "type": "User",
          "login": "PlethoraChutney",
          "commits": 8,
          "avatar_url": "https://avatars.githubusercontent.com/u/27385979?u=decc4056e6ebde0690d398ff62f084dd083116d1&v=4"
        },
        {
          "type": "User",
          "login": "padix-key",
          "commits": 6,
          "avatar_url": "https://avatars.githubusercontent.com/u/28051833?u=3db6b1f2fa1b5bb4d905dbda0b47881423b45eb3&v=4"
        }
      ],
      "contributors_sampled": 33,
      "top_contributor_share": 0.847
    },
    "quality_signals": {
      "has_ci": true,
      "has_tests": true,
      "ci_workflows": [
        "ci.yml",
        "pypi.yml",
        "release.yml",
        "test-daily.yml",
        "upload.yml"
      ],
      "has_docs_dir": true,
      "linter_configs": [],
      "has_editorconfig": false,
      "has_linter_config": true,
      "has_precommit_config": true
    },
    "security_signals": {
      "lockfiles": [
        "uv.lock"
      ],
      "scorecard": {
        "checks": [
          {
            "name": "Binary-Artifacts",
            "score": 10,
            "reason": "no binaries found in the repo",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#binary-artifacts"
          },
          {
            "name": "Branch-Protection",
            "score": null,
            "reason": "internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#branch-protection"
          },
          {
            "name": "CI-Tests",
            "score": 2,
            "reason": "6 out of 29 merged PRs checked by a CI test -- score normalized to 2",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#ci-tests"
          },
          {
            "name": "CII-Best-Practices",
            "score": 0,
            "reason": "no effort to earn an OpenSSF best practices badge detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#cii-best-practices"
          },
          {
            "name": "Code-Review",
            "score": 6,
            "reason": "Found 20/30 approved changesets -- score normalized to 6",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#code-review"
          },
          {
            "name": "Contributors",
            "score": 10,
            "reason": "project has 15 contributing companies or organizations",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#contributors"
          },
          {
            "name": "Dangerous-Workflow",
            "score": 10,
            "reason": "no dangerous workflow patterns detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dangerous-workflow"
          },
          {
            "name": "Dependency-Update-Tool",
            "score": 0,
            "reason": "no update tool detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#dependency-update-tool"
          },
          {
            "name": "Fuzzing",
            "score": 0,
            "reason": "project is not fuzzed",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#fuzzing"
          },
          {
            "name": "License",
            "score": 10,
            "reason": "license file detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#license"
          },
          {
            "name": "Maintained",
            "score": 7,
            "reason": "0 commit(s) and 9 issue activity found in the last 90 days -- score normalized to 7",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#maintained"
          },
          {
            "name": "Packaging",
            "score": 10,
            "reason": "packaging workflow detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#packaging"
          },
          {
            "name": "Pinned-Dependencies",
            "score": 0,
            "reason": "dependency not pinned by hash detected -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#pinned-dependencies"
          },
          {
            "name": "SAST",
            "score": 0,
            "reason": "SAST tool is not run on all commits -- score normalized to 0",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#sast"
          },
          {
            "name": "Security-Policy",
            "score": 0,
            "reason": "security policy file not detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#security-policy"
          },
          {
            "name": "Signed-Releases",
            "score": 0,
            "reason": "Project has not signed or included provenance with any releases.",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#signed-releases"
          },
          {
            "name": "Token-Permissions",
            "score": 0,
            "reason": "detected GitHub workflow tokens with excessive permissions",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#token-permissions"
          },
          {
            "name": "Vulnerabilities",
            "score": 10,
            "reason": "0 existing vulnerabilities detected",
            "documentation_url": "https://github.com/ossf/scorecard/blob/c395761df6afe1a69e476bc60a013a94bcbc153f/docs/checks.md#vulnerabilities"
          }
        ],
        "commit": "fe537e5b126c5cca94855914b0cc1c952daa7706",
        "ran_at": "2026-07-15T14:46:10Z",
        "aggregate_score": 4.6,
        "scorecard_version": "v5.5.0"
      },
      "has_codeql_workflow": false,
      "has_security_policy": false,
      "has_dependabot_config": false
    }
  },
  "config": {
    "disabled_metrics": [],
    "disabled_categories": [],
    "disabled_components": {}
  },
  "source": {
    "url": "https://github.com/bradyajohnston/molecularnodes",
    "host": "github.com",
    "name": "molecularnodes",
    "owner": "bradyajohnston"
  },
  "metrics": {
    "overall": {
      "key": "overall",
      "band": "good",
      "name": "Overall health",
      "note": null,
      "notes": [],
      "value": 72,
      "inputs": {
        "security": 46,
        "vitality": 82,
        "community": 73,
        "governance": 69,
        "engineering": 87
      },
      "components": []
    },
    "categories": [
      {
        "key": "vitality",
        "band": "good",
        "name": "Vitality",
        "value": 82,
        "weight": 0.22,
        "metrics": [
          {
            "key": "development_activity",
            "band": "good",
            "name": "Development activity",
            "note": null,
            "notes": [],
            "value": 82,
            "inputs": {
              "commits_last_year": 134,
              "human_commit_share": null,
              "days_since_last_push": 6,
              "active_weeks_last_year": 31
            },
            "components": [
              {
                "key": "push_recency",
                "name": "Push recency",
                "detail": "last push 6 days ago",
                "points": 36,
                "status": "met",
                "details": [
                  {
                    "code": "push_recency",
                    "params": {
                      "days": 6
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_cadence",
                "name": "Commit cadence",
                "detail": "31/52 weeks with commits",
                "points": 21.5,
                "status": "partial",
                "details": [
                  {
                    "code": "commit_cadence_weeks",
                    "params": {
                      "weeks": 31
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "commit_volume",
                "name": "Commit volume",
                "detail": "134 commits in the last year",
                "points": 18,
                "status": "met",
                "details": [
                  {
                    "code": "commits_last_year",
                    "params": {
                      "count": 134
                    }
                  }
                ],
                "max_points": 18
              },
              {
                "key": "openssf_scorecard_maintained",
                "name": "OpenSSF Scorecard: Maintained",
                "detail": "0 commit(s) and 9 issue activity found in the last 90 days -- score normalized to 7",
                "points": 7,
                "status": "partial",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "release_discipline",
            "band": "good",
            "name": "Release discipline",
            "note": null,
            "notes": [],
            "value": 81,
            "inputs": {
              "releases_count": 92,
              "latest_release_tag": "v4.5.12",
              "releases_from_tags": false,
              "days_since_latest_release": 119,
              "mean_days_between_releases": 20.5
            },
            "components": [
              {
                "key": "ships_releases",
                "name": "Ships releases",
                "detail": "92 releases published",
                "points": 27,
                "status": "met",
                "details": [
                  {
                    "code": "releases_published",
                    "params": {
                      "count": 92
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "release_recency",
                "name": "Release recency",
                "detail": "latest release 119 days ago",
                "points": 27,
                "status": "partial",
                "details": [
                  {
                    "code": "release_recency",
                    "params": {
                      "days": 119
                    }
                  }
                ],
                "max_points": 36
              },
              {
                "key": "release_cadence",
                "name": "Release cadence",
                "detail": "a release every ~20.5 days",
                "points": 27,
                "status": "met",
                "details": [
                  {
                    "code": "release_cadence",
                    "params": {
                      "gap": 20.5
                    }
                  }
                ],
                "max_points": 27
              },
              {
                "key": "openssf_scorecard_signed_releases",
                "name": "OpenSSF Scorecard: Signed-Releases",
                "detail": "Project has not signed or included provenance with any releases.",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "abandonment",
            "band": "excellent",
            "name": "Abandonment",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "cap": null,
              "state": "unverified",
              "guards": [],
              "signals": [],
              "red_flag": false,
              "multiplier_pct": 100,
              "declared_reason": null,
              "unverified_reason": "no_commit_sample",
              "unanswered_open_prs": null,
              "unanswered_open_issues": null,
              "days_since_last_merged_pr": null,
              "days_since_last_human_commit": null,
              "days_since_last_human_commit_is_floor": false
            },
            "components": [
              {
                "key": "project_is_still_maintained",
                "name": "Project is still maintained",
                "detail": "maintenance record not established from the collected data",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "abandonment_unverified",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Is the project alive — is code being written and are releases shipping?"
      },
      {
        "key": "community",
        "band": "good",
        "name": "Community & Adoption",
        "value": 73,
        "weight": 0.18,
        "metrics": [
          {
            "key": "popularity",
            "band": "good",
            "name": "Popularity & adoption",
            "note": null,
            "notes": [],
            "value": 75,
            "inputs": {
              "forks": 124,
              "stars": 1317,
              "watchers": 20,
              "growth_state": "unverified",
              "growth_factor_pct": 100,
              "growth_unverified_reason": "no_history"
            },
            "components": [
              {
                "key": "stars",
                "name": "Stars",
                "detail": "1,317 stars",
                "points": 50.6,
                "status": "partial",
                "details": [
                  {
                    "code": "stars",
                    "params": {
                      "count": 1317
                    }
                  }
                ],
                "max_points": 60
              },
              {
                "key": "forks",
                "name": "Forks",
                "detail": "124 forks",
                "points": 17.4,
                "status": "partial",
                "details": [
                  {
                    "code": "forks",
                    "params": {
                      "count": 124
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "watchers",
                "name": "Watchers",
                "detail": "20 watchers",
                "points": 7.1,
                "status": "partial",
                "details": [
                  {
                    "code": "watchers",
                    "params": {
                      "count": 20
                    }
                  }
                ],
                "max_points": 15
              }
            ]
          },
          {
            "key": "community_health",
            "band": "good",
            "name": "Community health",
            "note": null,
            "notes": [],
            "value": 70,
            "inputs": {
              "has_readme": true,
              "has_license": true,
              "has_contributing": true,
              "has_issue_template": false,
              "has_code_of_conduct": false,
              "has_pull_request_template": false
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 22.5,
                "status": "met",
                "details": [],
                "max_points": 22.5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "recognized license (GPL-3.0)",
                "points": 22.5,
                "status": "met",
                "details": [
                  {
                    "code": "license_standard",
                    "params": {}
                  },
                  {
                    "code": "license_spdx",
                    "params": {
                      "spdx": "GPL-3.0"
                    }
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributing_guide",
                "name": "CONTRIBUTING guide",
                "detail": null,
                "points": 18,
                "status": "met",
                "details": [],
                "max_points": 18
              },
              {
                "key": "code_of_conduct",
                "name": "Code of conduct",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 13.5
              },
              {
                "key": "issue_template",
                "name": "Issue template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.2
              },
              {
                "key": "pr_template",
                "name": "PR template",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.3
              }
            ]
          }
        ],
        "description": "Does the project have users, downloads, attention, and a welcoming setup for contributors?"
      },
      {
        "key": "governance",
        "band": "moderate",
        "name": "Sustainability & Governance",
        "value": 69,
        "weight": 0.24,
        "metrics": [
          {
            "key": "maintainer_resilience",
            "band": "at_risk",
            "name": "Maintainer resilience (bus factor)",
            "note": null,
            "notes": [],
            "value": 36,
            "inputs": {
              "bus_factor": 1,
              "contributors_sampled": 33,
              "top_contributor_share": 0.847
            },
            "components": [
              {
                "key": "bus_factor",
                "name": "Bus factor",
                "detail": "1 contributor(s) cover half of all commits",
                "points": 9,
                "status": "partial",
                "details": [
                  {
                    "code": "bus_factor",
                    "params": {
                      "count": 1
                    }
                  }
                ],
                "max_points": 54
              },
              {
                "key": "commit_distribution",
                "name": "Commit distribution",
                "detail": "top contributor authored 85% of commits",
                "points": 3.4,
                "status": "partial",
                "details": [
                  {
                    "code": "top_contributor_share",
                    "params": {
                      "share": 85
                    }
                  }
                ],
                "max_points": 22.5
              },
              {
                "key": "contributor_breadth",
                "name": "Contributor breadth",
                "detail": "33 contributors",
                "points": 13.5,
                "status": "met",
                "details": [
                  {
                    "code": "contributors_sampled",
                    "params": {
                      "count": 33
                    }
                  }
                ],
                "max_points": 13.5
              },
              {
                "key": "openssf_scorecard_contributors",
                "name": "OpenSSF Scorecard: Contributors",
                "detail": "project has 15 contributing companies or organizations",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "responsiveness",
            "band": "good",
            "name": "Issue & PR responsiveness",
            "note": null,
            "notes": [],
            "value": 83,
            "inputs": {
              "merged_prs": 503,
              "open_issues": 85,
              "closed_issues": 426,
              "issue_closed_ratio": 0.834,
              "closed_unmerged_prs": 43
            },
            "components": [
              {
                "key": "issue_resolution",
                "name": "Issue resolution",
                "detail": "83% of issues closed",
                "points": 39,
                "status": "partial",
                "details": [
                  {
                    "code": "issues_closed_share",
                    "params": {
                      "share": 83
                    }
                  }
                ],
                "max_points": 46.75
              },
              {
                "key": "pr_acceptance",
                "name": "PR acceptance",
                "detail": "503/546 decided PRs merged",
                "points": 35.2,
                "status": "partial",
                "details": [
                  {
                    "code": "decided_prs_merged",
                    "params": {
                      "merged": 503,
                      "decided": 546
                    }
                  }
                ],
                "max_points": 38.25
              },
              {
                "key": "openssf_scorecard_code_review",
                "name": "OpenSSF Scorecard: Code-Review",
                "detail": "Found 20/30 approved changesets -- score normalized to 6",
                "points": 9,
                "status": "partial",
                "details": [],
                "max_points": 15
              }
            ]
          },
          {
            "key": "stewardship",
            "band": "moderate",
            "name": "Ownership & stewardship",
            "note": "Excluded from scoring (no data or not applicable): Verified domain. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "verified_domain"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 68,
            "inputs": {
              "followers": 462,
              "owner_type": "User",
              "is_verified": null,
              "owner_login": "BradyAJohnston",
              "public_repos": 124,
              "account_age_days": 3086
            },
            "components": [
              {
                "key": "ownership_backing",
                "name": "Ownership backing",
                "detail": "personal (user) account",
                "points": 10,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_personal",
                    "params": {}
                  }
                ],
                "max_points": 30
              },
              {
                "key": "verified_domain",
                "name": "Verified domain",
                "detail": "not applicable to user accounts",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "not_applicable_to_user_accounts",
                    "params": {}
                  }
                ],
                "max_points": 20
              },
              {
                "key": "owner_reach",
                "name": "Owner reach",
                "detail": "462 followers of BradyAJohnston",
                "points": 19.2,
                "status": "partial",
                "details": [
                  {
                    "code": "owner_followers",
                    "params": {
                      "count": 462,
                      "login": "BradyAJohnston"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "track_record",
                "name": "Track record",
                "detail": "124 public repos, account ~8 yr old",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "public_repos",
                    "params": {
                      "count": 124
                    }
                  },
                  {
                    "code": "account_age_years",
                    "params": {
                      "years": 8
                    }
                  }
                ],
                "max_points": 25
              }
            ]
          },
          {
            "key": "package_maintenance",
            "band": "excellent",
            "name": "Package maintenance",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "packages": [
                "molecularnodes"
              ],
              "ecosystems": "pypi",
              "any_deprecated": false,
              "min_days_since_publish": 119
            },
            "components": [
              {
                "key": "published_resolvable",
                "name": "Published & resolvable",
                "detail": "1 package(s) on pypi",
                "points": 25,
                "status": "met",
                "details": [
                  {
                    "code": "packages_published",
                    "params": {
                      "count": 1,
                      "ecosystems": "pypi"
                    }
                  }
                ],
                "max_points": 25
              },
              {
                "key": "publish_recency",
                "name": "Publish recency",
                "detail": "latest publish 119 days ago",
                "points": 35,
                "status": "met",
                "details": [
                  {
                    "code": "publish_recency",
                    "params": {
                      "days": 119
                    }
                  }
                ],
                "max_points": 35
              },
              {
                "key": "version_history",
                "name": "Version history",
                "detail": "27 published versions",
                "points": 20,
                "status": "met",
                "details": [
                  {
                    "code": "published_versions",
                    "params": {
                      "count": 27
                    }
                  }
                ],
                "max_points": 20
              },
              {
                "key": "not_deprecated",
                "name": "Not deprecated",
                "detail": "active, not deprecated or yanked",
                "points": 20,
                "status": "met",
                "details": [
                  {
                    "code": "package_not_deprecated",
                    "params": {}
                  }
                ],
                "max_points": 20
              }
            ]
          }
        ],
        "description": "Will the project survive its people — bus factor, responsiveness, who backs it, and package upkeep?"
      },
      {
        "key": "engineering",
        "band": "excellent",
        "name": "Engineering Quality",
        "value": 87,
        "weight": 0.2,
        "metrics": [
          {
            "key": "engineering_practices",
            "band": "good",
            "name": "Engineering practices",
            "note": null,
            "notes": [],
            "value": 78,
            "inputs": {
              "has_ci": true,
              "has_tests": true,
              "has_editorconfig": false,
              "has_linter_config": true,
              "has_precommit_config": true
            },
            "components": [
              {
                "key": "ci_workflows",
                "name": "CI workflows",
                "detail": "5 workflow(s)",
                "points": 24,
                "status": "met",
                "details": [
                  {
                    "code": "ci_workflows",
                    "params": {
                      "count": 5
                    }
                  }
                ],
                "max_points": 24
              },
              {
                "key": "tests_present",
                "name": "Tests present",
                "detail": null,
                "points": 24,
                "status": "met",
                "details": [],
                "max_points": 24
              },
              {
                "key": "linter_config",
                "name": "Linter config",
                "detail": null,
                "points": 16,
                "status": "met",
                "details": [],
                "max_points": 16
              },
              {
                "key": "pre_commit_hooks",
                "name": "Pre-commit hooks",
                "detail": null,
                "points": 9.6,
                "status": "met",
                "details": [],
                "max_points": 9.6
              },
              {
                "key": "editorconfig",
                "name": ".editorconfig",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 6.4
              },
              {
                "key": "openssf_scorecard_ci_tests",
                "name": "OpenSSF Scorecard: CI-Tests",
                "detail": "6 out of 29 merged PRs checked by a CI test -- score normalized to 2",
                "points": 4,
                "status": "partial",
                "details": [],
                "max_points": 20
              }
            ]
          },
          {
            "key": "documentation",
            "band": "excellent",
            "name": "Documentation",
            "note": null,
            "notes": [],
            "value": 100,
            "inputs": {
              "topics": [
                "blender",
                "biochemistry",
                "protein",
                "protein-structure",
                "protein-visualization",
                "sciart",
                "visualisation",
                "structural-biology",
                "blender-addon",
                "protein-data-bank",
                "molecule",
                "proteins",
                "pdb",
                "molecular-modeling",
                "molecular",
                "molecular-graphics",
                "molecular-dynamics",
                "molecular-structures",
                "mmcif",
                "3d-visualization"
              ],
              "has_wiki": true,
              "homepage": "https://bradyajohnston.github.io/MolecularNodes/",
              "has_readme": true,
              "has_docs_dir": true,
              "has_description": true
            },
            "components": [
              {
                "key": "readme",
                "name": "README",
                "detail": null,
                "points": 30,
                "status": "met",
                "details": [],
                "max_points": 30
              },
              {
                "key": "documentation_directory",
                "name": "Documentation directory",
                "detail": null,
                "points": 25,
                "status": "met",
                "details": [],
                "max_points": 25
              },
              {
                "key": "documentation_homepage_site",
                "name": "Documentation / homepage site",
                "detail": "https://bradyajohnston.github.io/MolecularNodes/",
                "points": 15,
                "status": "met",
                "details": [],
                "max_points": 15
              },
              {
                "key": "repository_description",
                "name": "Repository description",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "topics",
                "name": "Topics",
                "detail": "20 topics",
                "points": 10,
                "status": "met",
                "details": [
                  {
                    "code": "topics_count",
                    "params": {
                      "count": 20
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "wiki",
                "name": "Wiki",
                "detail": null,
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              }
            ]
          }
        ],
        "description": "Are baseline engineering and documentation practices in place?"
      },
      {
        "key": "security",
        "band": "at_risk",
        "name": "Security",
        "value": 46,
        "weight": 0.16,
        "metrics": [
          {
            "key": "security_posture",
            "band": "at_risk",
            "name": "Security posture",
            "note": "Excluded from scoring (no data or not applicable): Branch-Protection. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "branch_protection"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 46,
            "inputs": {
              "source": "openssf_scorecard",
              "checks_evaluated": 17,
              "scorecard_version": "v5.5.0",
              "checks_inconclusive": 1,
              "scorecard_aggregate": 4.6
            },
            "components": [
              {
                "key": "binary_artifacts",
                "name": "Binary-Artifacts",
                "detail": "no binaries found in the repo",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "branch_protection",
                "name": "Branch-Protection",
                "detail": "internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 7.5
              },
              {
                "key": "ci_tests",
                "name": "CI-Tests",
                "detail": "6 out of 29 merged PRs checked by a CI test -- score normalized to 2",
                "points": 0.5,
                "status": "partial",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "cii_best_practices",
                "name": "CII-Best-Practices",
                "detail": "no effort to earn an OpenSSF best practices badge detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "code_review",
                "name": "Code-Review",
                "detail": "Found 20/30 approved changesets -- score normalized to 6",
                "points": 4.5,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "contributors",
                "name": "Contributors",
                "detail": "project has 15 contributing companies or organizations",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "dangerous_workflow",
                "name": "Dangerous-Workflow",
                "detail": "no dangerous workflow patterns detected",
                "points": 10,
                "status": "met",
                "details": [],
                "max_points": 10
              },
              {
                "key": "dependency_update_tool",
                "name": "Dependency-Update-Tool",
                "detail": "no update tool detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "fuzzing",
                "name": "Fuzzing",
                "detail": "project is not fuzzed",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "license",
                "name": "License",
                "detail": "license file detected",
                "points": 2.5,
                "status": "met",
                "details": [],
                "max_points": 2.5
              },
              {
                "key": "maintained",
                "name": "Maintained",
                "detail": "0 commit(s) and 9 issue activity found in the last 90 days -- score normalized to 7",
                "points": 5.2,
                "status": "partial",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "packaging",
                "name": "Packaging",
                "detail": "packaging workflow detected",
                "points": 5,
                "status": "met",
                "details": [],
                "max_points": 5
              },
              {
                "key": "pinned_dependencies",
                "name": "Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "sast",
                "name": "SAST",
                "detail": "SAST tool is not run on all commits -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "security_policy",
                "name": "Security-Policy",
                "detail": "security policy file not detected",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 5
              },
              {
                "key": "signed_releases",
                "name": "Signed-Releases",
                "detail": "Project has not signed or included provenance with any releases.",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "token_permissions",
                "name": "Token-Permissions",
                "detail": "detected GitHub workflow tokens with excessive permissions",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 7.5
              },
              {
                "key": "vulnerabilities",
                "name": "Vulnerabilities",
                "detail": "0 existing vulnerabilities detected",
                "points": 7.5,
                "status": "met",
                "details": [],
                "max_points": 7.5
              }
            ]
          },
          {
            "key": "high_risk_jurisdiction_exposure",
            "band": "excellent",
            "name": "High-Risk Jurisdiction Exposure",
            "note": "Only high-confidence self-published location evidence affects this multiplier. Ambiguous matches are review-only; country evidence is not proof of nationality, citizenship, legal registration, malicious intent, or sanctions status.",
            "notes": [
              {
                "code": "jurisdiction_evidence_limits",
                "params": {}
              }
            ],
            "value": 100,
            "inputs": {
              "meaning": "self-published location evidence; not nationality or citizenship",
              "red_flag": false,
              "exposures": [],
              "policy_countries": [
                "Russia",
                "Iran",
                "North Korea"
              ],
              "review_only_matches": 0,
              "assessed_self_published_locations": 9
            },
            "components": [
              {
                "key": "policy_exposure_multiplier",
                "name": "Policy exposure multiplier",
                "detail": "no confirmed policy-scope location match",
                "points": 100,
                "status": "met",
                "details": [
                  {
                    "code": "jurisdiction_no_match",
                    "params": {}
                  }
                ],
                "max_points": 100
              }
            ]
          }
        ],
        "description": "Are visible security and supply-chain practices strong, with no malicious dependency and no unresolved high-risk jurisdiction exposure?"
      },
      {
        "key": "ai_readiness",
        "band": "at_risk",
        "name": "AI Readiness",
        "value": 35,
        "weight": 0,
        "metrics": [
          {
            "key": "ai_agent_context",
            "band": "critical",
            "name": "Agent context & guidance",
            "note": "Excluded from scoring (no data or not applicable): Legible commit history. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "legible_commit_history"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 1,
            "inputs": {
              "has_llms_txt": false,
              "legible_history_share": null,
              "agent_instruction_files": [],
              "agent_instruction_max_bytes": null
            },
            "components": [
              {
                "key": "agent_instructions",
                "name": "Agent instructions",
                "detail": "no CLAUDE.md / AGENTS.md / editor rules",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_agent_instructions",
                    "params": {}
                  }
                ],
                "max_points": 45
              },
              {
                "key": "machine_readable_docs_llms_txt",
                "name": "Machine-readable docs (llms.txt)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 15
              },
              {
                "key": "legible_commit_history",
                "name": "Legible commit history",
                "detail": "no data",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 40
              }
            ]
          },
          {
            "key": "ai_verify_loop",
            "band": "moderate",
            "name": "Verify loop (build / test / typecheck)",
            "note": "Excluded from scoring (no data or not applicable): Demonstrated agent practice, Automated maintenance. Remaining weights renormalized.",
            "notes": [
              {
                "code": "excluded_no_data",
                "params": {
                  "components": [
                    "demonstrated_agent_practice",
                    "automated_maintenance"
                  ]
                }
              },
              {
                "code": "weights_renormalized",
                "params": {}
              }
            ],
            "value": 52,
            "inputs": {
              "has_nix": false,
              "has_tests": true,
              "lockfiles": [
                "uv.lock"
              ],
              "has_dockerfile": false,
              "typed_language": false,
              "bootstrap_files": [],
              "has_devcontainer": false,
              "has_linter_config": true,
              "typecheck_configs": [],
              "agent_commit_share": null,
              "toolchain_manifests": [],
              "dependency_bot_commit_share": null
            },
            "components": [
              {
                "key": "one_command_bootstrap",
                "name": "One-command bootstrap",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 18
              },
              {
                "key": "automated_tests",
                "name": "Automated tests",
                "detail": null,
                "points": 22,
                "status": "met",
                "details": [],
                "max_points": 22
              },
              {
                "key": "lint_format_config",
                "name": "Lint / format config",
                "detail": null,
                "points": 11,
                "status": "met",
                "details": [],
                "max_points": 11
              },
              {
                "key": "static_type_checking",
                "name": "Static type checking",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 11
              },
              {
                "key": "reproducible_environment",
                "name": "Reproducible environment",
                "detail": "lockfile",
                "points": 10,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "lockfile"
                    }
                  }
                ],
                "max_points": 10
              },
              {
                "key": "demonstrated_agent_practice",
                "name": "Demonstrated agent practice",
                "detail": "no data",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 10
              },
              {
                "key": "automated_maintenance",
                "name": "Automated maintenance",
                "detail": "no data",
                "points": 0,
                "status": "excluded",
                "details": [
                  {
                    "code": "no_data",
                    "params": {}
                  }
                ],
                "max_points": 8
              },
              {
                "key": "openssf_scorecard_pinned_dependencies",
                "name": "OpenSSF Scorecard: Pinned-Dependencies",
                "detail": "dependency not pinned by hash detected -- score normalized to 0",
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 10
              }
            ]
          },
          {
            "key": "ai_code_legibility",
            "band": "moderate",
            "name": "Code legibility for models",
            "note": null,
            "notes": [],
            "value": 55,
            "inputs": {
              "primary_language": "Python",
              "largest_source_bytes": 90872,
              "source_files_sampled": 131,
              "oversized_source_files": 1
            },
            "components": [
              {
                "key": "type_checkable_code",
                "name": "Type-checkable code",
                "detail": "Python without a type-check config",
                "points": 0,
                "status": "missed",
                "details": [
                  {
                    "code": "no_typecheck_config_language",
                    "params": {
                      "language": "Python"
                    }
                  }
                ],
                "max_points": 45
              },
              {
                "key": "manageable_file_sizes",
                "name": "Manageable file sizes",
                "detail": "1/131 source files over 60KB",
                "points": 54.6,
                "status": "partial",
                "details": [
                  {
                    "code": "oversized_source_files",
                    "params": {
                      "kb": 60,
                      "sampled": 131,
                      "oversized": 1
                    }
                  }
                ],
                "max_points": 55
              }
            ]
          },
          {
            "key": "ai_interfaces",
            "band": "at_risk",
            "name": "Machine-readable interfaces",
            "note": null,
            "notes": [],
            "value": 40,
            "inputs": {
              "example_dirs": [
                "examples"
              ],
              "has_mcp_signal": false,
              "api_schema_files": []
            },
            "components": [
              {
                "key": "api_schema_openapi_graphql_proto",
                "name": "API schema (OpenAPI/GraphQL/proto)",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 40
              },
              {
                "key": "mcp_server",
                "name": "MCP server",
                "detail": null,
                "points": 0,
                "status": "missed",
                "details": [],
                "max_points": 20
              },
              {
                "key": "runnable_examples",
                "name": "Runnable examples",
                "detail": "examples",
                "points": 40,
                "status": "met",
                "details": [
                  {
                    "code": "file_list",
                    "params": {
                      "files": "examples"
                    }
                  }
                ],
                "max_points": 40
              }
            ]
          }
        ],
        "description": "How well is the repo equipped to be developed and maintained with AI coding agents? An independent, experimental badge — weight 0.0, so it is surfaced on its own and does not affect the overall health score."
      }
    ],
    "metrics_version": "1.13.0"
  },
  "warnings": [],
  "report_type": "repository",
  "generated_at": "2026-07-15T14:46:49.998015Z",
  "schema_version": "0.11.0",
  "badge_url": "https://raw.githubusercontent.com/inspect-software/badges/main/v1/b/bradyajohnston/molecularnodes.svg",
  "full_name": "bradyajohnston/molecularnodes",
  "license_state": "standard",
  "license_spdx": "GPL-3.0"
}

评分是信号,而非担保。 评分反映的是 GitHub 上公开可见的实践——不是代码审计,也不是安全保证。

缺失数据将被剔除并重新归一化权重,绝不按零分计。方法论已版本化并公开:指标 v1.13.0、模式 v0.11.0—— 完整方法论 · 指标知识库.

单项结果在整体记录中的位置: 汇总统计PyPI.