公开记录优秀
软件健康报告模式 0.27.0 · 指标 2.3.1 · 2026-07-31 20:25 UTC
broadinstitute / gatk-sv
A structural variation pipeline for short-read sequencing
broadinstitute/gatk-sv 的健康指数为 100 分中的 88 分，处于「优秀」区间。 其得分最高的类别是Vitality（86/100），最低的是AI Readiness（42/100）。 最近一次更新在今天。 近期的大部分工作由 3 位贡献者完成。
88
总分 / 100软件健康指数
指标归入加权类别，统一采用 1–100 量表。总体分先取类别加权平均，再依据公开记录的分布进行校准，使各等级具有百分位含义；当公开证据触发高风险司法辖区政策时，评级会按政策调整，并设置 34（存在风险）的上限。
88
卓越93-100公开记录中的最高层级（约前 5%）；基本满足所有检验标准
优秀80-92各方面均表现强劲；仅有少量不足
良好65-79健康；不足之处有限且可控
中等50-64可接受，但存在明显不足；建议进行审查
薄弱35-49多个领域存在实质性薄弱环节
存在风险20-34存在重大薄弱环节；采用时应保持审慎
危急1-19问题严重（项目被弃置、仅有单一维护者、缺乏基本工程规范）
评分画像
每条轴代表一个类别。形状比平均值更重要——健康的对象会填满整个图形，而“一峰一谷”式画像意味着某一维度的优势正掩盖另一维度的风险。
加权总体分 74 经校准后在公布的指数量表上为 88（记录校准 2026-08-02）。
所有权
软件包生态系统
按类别列示的指标
活力
项目是否仍有生命——是否仍在编写代码，是否仍在发布版本？
86
开发活跃度
82优秀
评分方式
| 36/36 | 推送新近度 — 最近一次推送于 0 天前 |
| 18/36 | 提交节奏 — 52 周中有 26 周有提交 |
| 17.8/18 | 提交量 — 最近一年 94 次提交 |
| 10/10 | OpenSSF Scorecard：Maintained — 13 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10 |
所用输入
| commits_last_year | 94 |
| human_commit_share | 1 |
| days_since_last_push | 0 |
| active_weeks_last_year | 26 |
发布纪律
92优秀
评分方式
| 27/27 | 有发布版本 — 已发布 79 个发布版本 |
| 36/36 | 发布时效 — 最近一次发布版本于 17 天前 |
| 19.8/27 | 发布节奏 — 约每 77 天发布一次 |
| 0/10 | OpenSSF Scorecard：Signed-Releases — 无数据 |
所用输入
| releases_count | 79 |
| latest_release_tag | v1.1.1 |
| releases_from_tags | 否 |
| days_since_latest_release | 17 |
| mean_days_between_releases | 77 |
已排除计分（无数据或不适用）：OpenSSF Scorecard：Signed-Releases。 其余权重已重新归一化。
社区与采用
项目是否拥有用户、下载量与关注度，并具备欢迎贡献者参与的配置？
71
流行度与采用
59中等
评分方式
| 37.5/60 | 星标 — 206 个星标 |
| 15.9/25 | 复刻 — 81 个复刻 |
| 5.6/15 | 关注者 — 11 位关注者 |
所用输入
| forks | 81 |
| stars | 206 |
| watchers | 11 |
| growth_state | unverified |
| growth_factor_pct | 100 |
| growth_unverified_reason | no_history |
社区健康
85优秀
评分方式
| 22.5/22.5 | README |
| 22.5/22.5 | 许可证 — 可识别的许可证（BSD-3-Clause） |
| 18/18 | CONTRIBUTING 指南 |
| 13.5/13.5 | 行为准则 |
| 0/7.2 | 议题模板 |
| 0/6.3 | PR 模板 |
所用输入
| has_readme | 是 |
| has_license | 是 |
| readme_badges | — |
| has_contributing | 是 |
| has_issue_template | 否 |
| has_code_of_conduct | 是 |
| readme_badge_services | — |
| has_pull_request_template | 否 |
可持续性与治理
项目能否在其成员之外延续——巴士系数、响应能力、由谁支持，以及软件包的维护状况？
76
维护者韧性（巴士系数）
76良好
评分方式
| 36/54 | 巴士系数 — 3 位贡献者贡献了半数提交 |
| 16.8/22.5 | 提交分布 — 头号贡献者编写了 25% 的提交 |
| 13.5/13.5 | 贡献者广度 — 20 位贡献者 |
| 10/10 | OpenSSF Scorecard：Contributors — project has 8 contributing companies or organizations |
所用输入
| bus_factor | 3 |
| contributors_sampled | 20 |
| top_contributor_share | 0.254 |
议题与 PR 响应能力
75良好
评分方式
| 26.8/42 | 议题解决 — 64% 的议题已关闭 |
| 26.2/30 | PR 接受 — 已裁定的 PR 中 560/641 已合并 |
| 0/13 | Newcomer PR acceptance — 30 天内没有首次贡献者的 PR 得到裁决 |
| 12/15 | OpenSSF Scorecard：Code-Review — Found 25/30 approved changesets -- score normalized to 8 |
所用输入
| merged_prs | 560 |
| open_issues | 99 |
| closed_issues | 174 |
| prs_merged_7d | — |
| prs_decided_7d | — |
| prs_merged_30d | — |
| prs_decided_30d | — |
| issue_closed_ratio | 0.637 |
| closed_unmerged_prs | 81 |
| first_time_authors_30d | — |
| first_time_prs_merged_30d | — |
| first_time_prs_decided_30d | — |
已排除计分（无数据或不适用）：newcomer_pr_acceptance。 其余权重已重新归一化。
所有权与托管责任
77良好
评分方式
| 30/30 | 所有权背书 — 组织持有 |
| 0/20 | 已验证域名 |
| 22.4/25 | 所有者影响力 — broadinstitute 有 1,290 位关注者 |
| 25/25 | 既往记录 — 1,515 个公开仓库，账户约 15 年 |
所用输入
| followers | 1,290 |
| owner_type | Organization |
| is_verified | — |
| owner_login | broadinstitute |
| public_repos | 1,515 |
| account_age_days | 5,804 |
工程质量
基础的工程与文档实践是否到位？
76
工程实践
84优秀
评分方式
| 24/24 | CI 工作流 — 5 个工作流 |
| 24/24 | 存在测试 |
| 16/16 | Linter 配置 — tox.ini |
| 0/9.6 | Pre-commit 钩子 |
| 0/6.4 | .editorconfig |
| 20/20 | OpenSSF Scorecard：CI-Tests — 25 out of 25 merged PRs checked by a CI test -- score normalized to 10 |
所用输入
| has_ci | 是 |
| has_tests | 是 |
| has_editorconfig | 否 |
| has_linter_config | 是 |
| has_precommit_config | 否 |
文档
65良好
评分方式
| 30/30 | README |
| 0/25 | 文档目录 |
| 15/15 | 文档 / 主页站点 — https://broadinstitute.github.io/gatk-sv/ |
| 10/10 | 仓库描述 |
| 10/10 | 主题标签 — 4 个主题标签 |
| 0/10 | Wiki |
所用输入
| topics | genomics, structural-variants, structural-variation, bioinformatics |
| has_wiki | 否 |
| homepage | https://broadinstitute.github.io/gatk-sv/ |
| has_readme | 是 |
| has_docs_dir | 否 |
| has_description | 是 |
安全
可见的安全与供应链实践是否稳固，且不存在未解决的高风险司法辖区暴露？
65
安全态势
56中等
评分方式
| 6.8/7.5 | Binary-Artifacts — binaries present in source code |
| 0/7.5 | Branch-Protection — 无数据 |
| 2.5/2.5 | CI-Tests — 25 out of 25 merged PRs checked by a CI test -- score normalized to 10 |
| 0/2.5 | CII-Best-Practices — no effort to earn an OpenSSF best practices badge detected |
| 6/7.5 | Code-Review — Found 25/30 approved changesets -- score normalized to 8 |
| 2.5/2.5 | Contributors — project has 8 contributing companies or organizations |
| 10/10 | Dangerous-Workflow — no dangerous workflow patterns detected |
| 0/7.5 | Dependency-Update-Tool — no update tool detected |
| 0/5 | Fuzzing — project is not fuzzed |
| 2.5/2.5 | 许可证 — license file detected |
| 7.5/7.5 | Maintained — 13 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10 |
| 0/5 | Packaging — 无数据 |
| 0/5 | Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
| 2.5/5 | SAST — SAST tool is not run on all commits -- score normalized to 5 |
| 0/5 | Security-Policy — security policy file not detected |
| 0/7.5 | Signed-Releases — 无数据 |
| 0/7.5 | Token-Permissions — detected GitHub workflow tokens with excessive permissions |
| 7.5/7.5 | Vulnerabilities — 0 existing vulnerabilities detected |
所用输入
| source | openssf_scorecard |
| checks_evaluated | 15 |
| scorecard_version | v5.5.0 |
| checks_inconclusive | 3 |
| scorecard_aggregate | 5.6 |
已排除计分（无数据或不适用）：branch_protection, packaging, signed_releases。 其余权重已重新归一化。
依赖安全公告
100卓越
评分方式
| 35/35 | 直接依赖不含已知公告 — 没有直接依赖携带已知公告 |
| 25/25 | 间接依赖不含已知公告 — 没有间接依赖携带已知公告 |
| 0/40 | 没有长期未处理的公告 — 没有公告带有发布日期 |
所用输入
| source | osv |
| advisories | 0 |
| affected_packages | 0 |
| assessed_packages | 12 |
| unassessed_packages | 0 |
| affected_by_severity | none |
| direct_affected_packages | 0 |
已排除计分（无数据或不适用）：没有长期未处理的公告。 其余权重已重新归一化。 比对的是 pypi:svtk@0.2.0 的运行时依赖闭包——安装已发布的软件包时真正被拉取进来的内容——共 12 个软件包。 未对可达性进行分析。
AI 就绪度
该仓库在多大程度上具备与 AI 编码代理协同开发与维护的条件？权重刻意设小（4%）：代理工具链是一项真实的维护信号，但完全不具备的仓库仍可达到 100/100。
42
AI 代理上下文与指引
37薄弱
评分方式
| 0/45 | 代理指令 — 没有 CLAUDE.md / AGENTS.md / 编辑器规则 |
| 0/15 | 机器可读文档（llms.txt） |
| 37.3/40 | 可读的提交历史 — 100 次人类提交中有 70 次说明了意图（结构化标题或解释性正文） |
所用输入
| has_llms_txt | 否 |
| legible_history_share | 0.7 |
| agent_instruction_files | — |
| agent_instruction_max_bytes | — |
评分方式
| 0/18 | 一条命令的引导启动 |
| 22/22 | 自动化测试 |
| 11/11 | Lint / 格式化配置 — tox.ini |
| 0/11 | 静态类型检查 |
| 10/10 | 可复现环境 — Dockerfile |
| 0/10 | 已体现的代理实践 — 最近 100 次提交中没有代理编写的提交 |
| 0/8 | 自动化维护 — 未观察到自动依赖更新 |
| 0/10 | OpenSSF Scorecard：Pinned-Dependencies — dependency not pinned by hash detected -- score normalized to 0 |
所用输入
| has_nix | 否 |
| has_tests | 是 |
| lockfiles | — |
| has_dockerfile | 是 |
| typed_language | 否 |
| bootstrap_files | — |
| has_devcontainer | 否 |
| has_linter_config | 是 |
| typecheck_configs | — |
| agent_commit_share | 0 |
| toolchain_manifests | — |
| dependency_bot_commit_share | 0 |
面向模型的代码可读性
54中等
评分方式
| 0/45 | 可类型检查的代码 — Python，未配置类型检查 |
| 54.4/55 | 可控的文件大小 — 采样的 255 个源文件中有 3 个超过 60KB |
所用输入
| primary_language | Python |
| largest_source_bytes | 120,131 |
| source_files_sampled | 255 |
| oversized_source_files | 3 |
机器可读接口
40薄弱
评分方式
| 0/40 | API 模式（OpenAPI/GraphQL/proto） |
| 0/20 | MCP 服务器 |
| 40/40 | 可运行示例 — notebooks |
所用输入
| example_dirs | notebooks |
| has_mcp_signal | 否 |
| api_schema_files | — |
关键数据
206GitHub 星标
20贡献者
94最近 12 个月提交数
0距最近推送天数
79发布版本数
3巴士系数（bus factor）
99开放议题
npm软件包生态系统数
数据采集警告
- Star history unavailable: GitHub GraphQL error: Resource not accessible by personal access token
- Could not fetch pypi package 'svqc' from its registry
- pypi package 'svtk' points at a different repository (https://github.com/simleek/displayarray); excluded from ecosystem scoring
- Could not fetch pypi package 'svtest' from its registry
- pypi package 'sv_utils' points at a different repository (https://github.com/friend1ws/sv_utils); excluded from ecosystem scoring
更多细节
Star 与 Fork 历史 0 ★ / 81 ⇿
0Star
81Fork
76发布
每颗 star 和每个 fork 的添加时间，来自 GitHub 并按天汇总。累计增长位于其构成来源——每日新增——的正上方，二者可相互对照：稳定的自然增长与短暂的突增形态截然不同。当这一差别可被衡量时，它会作为增长真实性予以报告。
主版本 0次版本 0修订 5
每个点涵盖 6 天。
OpenSSF Scorecard 5.6 / 10
5.6综合
来自开源项目 OpenSSF Scorecard 的独立、工具无关的安全评估。每项检查奖励的是安全实践本身，而非特定供应商的工具。Scorecard 无法判定的检查项标记为 不适用，并从安全评分中剔除（绝不按零分计）。
| 9 | Binary-Artifacts | binaries present in source code |
| 不适用 | Branch-Protection | internal error: error during branchesHandler.setup: internal error: some github tokens can't read classic branch protection rules: https://github.com/ossf/scorecard-action/blob/main/docs/authentication/fine-grained-auth-token.md |
| 10 | CI-Tests | 25 out of 25 merged PRs checked by a CI test -- score normalized to 10 |
| 0 | CII-Best-Practices | no effort to earn an OpenSSF best practices badge detected |
| 8 | Code-Review | Found 25/30 approved changesets -- score normalized to 8 |
| 10 | Contributors | project has 8 contributing companies or organizations |
| 10 | Dangerous-Workflow | no dangerous workflow patterns detected |
| 0 | Dependency-Update-Tool | no update tool detected |
| 0 | Fuzzing | project is not fuzzed |
| 10 | License | license file detected |
| 10 | Maintained | 13 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10 |
| 不适用 | Packaging | packaging workflow not detected |
| 0 | Pinned-Dependencies | dependency not pinned by hash detected -- score normalized to 0 |
| 5 | SAST | SAST tool is not run on all commits -- score normalized to 5 |
| 0 | Security-Policy | security policy file not detected |
| 不适用 | Signed-Releases | no releases found |
| 0 | Token-Permissions | detected GitHub workflow tokens with excessive permissions |
| 10 | Vulnerabilities | 0 existing vulnerabilities detected |
直接依赖 9
| 注册表 | 软件包 | 版本约束 | 清单文件 |
|---|---|---|---|
| npm | @docusaurus/core | ^3.10.1 | website/package.json |
| npm | @docusaurus/plugin-google-gtag | ^3.10.1 | website/package.json |
| npm | @docusaurus/preset-classic | ^3.10.1 | website/package.json |
| npm | @docusaurus/theme-mermaid | ^3.10.1 | website/package.json |
| npm | @mdx-js/react | ^3.0.0 | website/package.json |
| npm | clsx | ^2.0.0 | website/package.json |
| npm | prism-react-renderer | ^2.3.0 | website/package.json |
| npm | react | ^18.0.0 | website/package.json |
| npm | react-dom | ^18.0.0 | website/package.json |
全部依赖 38
来自 GitHub 依赖图的完整解析依赖集合：9 个直接依赖与 29 个间接（传递）软件包。仓库提交锁文件时，传递闭包才是完整的。
| 注册表 | 软件包 | 版本 | 关系 |
|---|---|---|---|
| npm | @docusaurus/core | ^3.10.1 | 直接 |
| npm | @docusaurus/plugin-google-gtag | ^3.10.1 | 直接 |
| npm | @docusaurus/preset-classic | ^3.10.1 | 直接 |
| npm | @docusaurus/theme-mermaid | ^3.10.1 | 直接 |
| npm | @mdx-js/react | ^3.0.0 | 直接 |
| npm | clsx | ^2.0.0 | 直接 |
| npm | prism-react-renderer | ^2.3.0 | 直接 |
| npm | react | ^18.0.0 | 直接 |
| npm | react-dom | ^18.0.0 | 直接 |
| npm | @docusaurus/module-type-aliases | ^3.10.1 | 间接 |
| npm | @docusaurus/types | ^3.10.1 | 间接 |
| PyPI | argparse | — | 间接 |
| PyPI | click | — | 间接 |
| PyPI | cython | — | 间接 |
| PyPI | dill | — | 间接 |
| PyPI | intervaltree | — | 间接 |
| PyPI | jsonschema | — | 间接 |
| PyPI | matplotlib | — | 间接 |
| PyPI | multiprocessing-logging | — | 间接 |
| PyPI | natsort | — | 间接 |
| PyPI | nose | — | 间接 |
| PyPI | numpy | — | 间接 |
| PyPI | openpyxl | — | 间接 |
| PyPI | pandas | — | 间接 |
| PyPI | plotly | — | 间接 |
| PyPI | psutil | — | 间接 |
| PyPI | pybedtools | — | 间接 |
| PyPI | pympler | — | 间接 |
| PyPI | pysam | — | 间接 |
| PyPI | requests | — | 间接 |
| PyPI | scipy | — | 间接 |
| PyPI | seaborn | — | 间接 |
| PyPI | setuptools | — | 间接 |
| PyPI | statsmodels | — | 间接 |
| PyPI | tqdm | — | 间接 |
| PyPI | urllib3 | — | 间接 |
| PyPI | wheel | — | 间接 |
| PyPI | xlsxwriter | — | 间接 |
依赖安全公告 0
安装 pypi:svtk@0.2.0 会引入 12 个包（直接与传递）：其中 0 个存在已知公告，0 个为直接依赖。
没有已知公告影响已评估的依赖。
公告表示依赖图中记录的版本落入某条公告的受影响范围。可达性未经分析，且依赖图包含开发与测试的版本固定——某项发现可能只涉及工具链而非交付的软件。
原始 JSON 报告 机器可读
{
"data": {
"repo": {
"topics": [
"genomics",
"structural-variants",
"structural-variation",
"bioinformatics"
],
"is_fork": false,
"size_kb": 163376,
"has_wiki": false,
"homepage": "https://broadinstitute.github.io/gatk-sv/",
"languages": {
"R": 716788,
"CSS": 4550,
"WDL": 1282298,
"Java": 65062,
"Shell": 632788,
"Cython": 1238,
"Python": 1881457,
"Dockerfile": 60441,
"JavaScript": 14252,
"Go Template": 229656,
"Jupyter Notebook": 199591
},
"pushed_at": "2026-07-31T19:28:45Z",
"created_at": "2020-06-18T20:52:07Z",
"owner_type": "Organization",
"updated_at": "2026-07-30T17:08:27Z",
"description": "A structural variation pipeline for short-read sequencing",
"is_archived": false,
"is_disabled": false,
"license_spdx": "BSD-3-Clause",
"default_branch": "main",
"license_spdx_raw": "BSD-3-Clause",
"primary_language": "Python",
"significant_languages": [
"Python",
"WDL",
"R",
"Shell"
]
},
"owner": {
"blog": "http://www.broadinstitute.org/",
"name": "Broad Institute",
"type": "Organization",
"login": "broadinstitute",
"company": null,
"location": "Cambridge, MA",
"followers": 1290,
"avatar_url": "https://avatars.githubusercontent.com/u/393552?v=4",
"created_at": "2010-09-09T16:37:46Z",
"is_verified": null,
"public_repos": 1515,
"account_age_days": 5804
},
"license": {
"state": "standard",
"spdx_id": "BSD-3-Clause",
"raw_spdx": "BSD-3-Clause",
"file_present": true,
"scorecard_found": true,
"profile_has_license": true
},
"activity": {
"releases": [
{
"tag": "v1.1.1",
"kind": "patch",
"published_at": "2026-07-13T21:54:04Z"
},
{
"tag": "v1.1",
"kind": "other",
"published_at": "2025-09-04T15:52:32Z"
},
{
"tag": "v1.0.5",
"kind": "patch",
"published_at": "2025-07-01T16:22:51Z"
},
{
"tag": "v1.0.4",
"kind": "patch",
"published_at": "2025-05-22T17:40:39Z"
},
{
"tag": "v1.0.3",
"kind": "patch",
"published_at": "2025-04-14T19:55:56Z"
},
{
"tag": "v1.0.2-hotfix",
"kind": "prerelease",
"published_at": "2025-02-10T17:26:57Z"
},
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{
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{
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{
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{
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{
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],
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},
{
"key": "governance",
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{
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},
{
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{
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{
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"note": null,
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{
"key": "verified_domain",
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{
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{
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},
{
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"name": "Engineering Quality",
"value": 76,
"weight": 0.19,
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{
"key": "engineering_practices",
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"note": null,
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"code": "ci_workflows",
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{
"key": "tests_present",
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{
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{
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{
"key": "openssf_scorecard_ci_tests",
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]
},
{
"key": "documentation",
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"note": null,
"notes": [],
"value": 65,
"inputs": {
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"structural-variation",
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"homepage": "https://broadinstitute.github.io/gatk-sv/",
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{
"key": "documentation_homepage_site",
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{
"key": "topics",
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{
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}
],
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{
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"metrics": [
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"key": "security_posture",
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{
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{
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{
"key": "dependency_update_tool",
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"status": "missed",
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{
"key": "fuzzing",
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"status": "missed",
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{
"key": "license",
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{
"key": "maintained",
"name": "Maintained",
"detail": "13 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 10",
"points": 7.5,
"status": "met",
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{
"key": "packaging",
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"code": "no_data",
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{
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{
"key": "sast",
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{
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],
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{
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"status": "missed",
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{
"key": "vulnerabilities",
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"detail": "0 existing vulnerabilities detected",
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"status": "met",
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]
},
{
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"notes": [
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},
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{
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},
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},
{
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"notes": [
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],
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"components": [
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],
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{
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"description": "How well is the repo equipped to be developed and maintained with AI coding agents? Carries a deliberately small weight: agent tooling is a real maintenance signal, but its absence must never gate the top of the scale (calibration saturates at raw 91, so 100/100 remains reachable with AI Readiness at zero)."
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"Could not fetch pypi package 'svqc' from its registry",
"pypi package 'svtk' points at a different repository (https://github.com/simleek/displayarray); excluded from ecosystem scoring",
"Could not fetch pypi package 'svtest' from its registry",
"pypi package 'sv_utils' points at a different repository (https://github.com/friend1ws/sv_utils); excluded from ecosystem scoring"
],
"report_type": "repository",
"generated_at": "2026-07-31T20:25:13.675172Z",
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}